-
4
-
-
0035098865
-
On the importance of standardisation in life sciences
-
(2001)
Bioinformatics
, vol.17
, Issue.2
, pp. 113-114
-
-
Brazma, A.1
-
12
-
-
0034714499
-
Gene expression profiling: monitoring transcription and translation products using DNA microarrays and proteomics
-
(2000)
FEBS Lett.
, vol.480
, Issue.1
, pp. 2-16
-
-
Celis, J.E.1
Kruhoffer, M.2
Gromova, I.3
Frederiksen, C.4
Ostergaard, M.5
Thykjaer, T.6
Gromov, P.7
Yu, J.8
Palsdottir, H.9
Magnusson, N.10
Orntoft, T.F.11
-
14
-
-
0002498488
-
-
The Chipping Forecast, 1999. Nat. Genet. 21(1).
-
-
-
-
15
-
-
0032112293
-
A genome-wide transcriptional analysis of the mitotic cell cycle
-
(1998)
Mol. Cell.
, vol.2
, Issue.1
, pp. 65-73
-
-
Cho, R.J.1
Campbell, M.J.2
Winzeler, E.A.3
Steinmetz, L.4
Conway, A.5
Wodicka, L.6
Wolfsberg, T.G.7
Gabrielian, A.E.8
Landsman, D.9
Lockhart, D.J.10
Davis, R.W.11
-
16
-
-
0032561246
-
The transcriptional program of sporulation in budding yeast
-
(1998)
Science
, vol.282
, Issue.5389
, pp. 699-705
-
-
Chu, S.1
De Risi, J.2
Eisen, M.B.3
Mulholland, J.4
Botstein, D.5
Brown, P.O.6
Herskowitz, I.7
-
17
-
-
0001885544
-
Mining the gene expression matrix: inferring gene relationships from large scale gene expression data
-
Paton R.C., Holcombe M. (Eds.), Information Processing in Cells and Tissues, New York: Plenum
-
(1998)
, pp. 203-212
-
-
D'haeseleer, P.1
Wen, X.2
Fuhrman, S.3
Somogyi, R.4
-
24
-
-
0002658296
-
-
Algorithms on Strings, Trees, and Sequences: Computer Science and Computational Biology, New York: Cambridge University Press
-
(1997)
-
-
Gusfield, D.1
-
27
-
-
0002588574
-
-
Hastie, T., Tibshirani, R., Eisen, M.B., Alizadeh, A., Levy, R., Staudt, L., Chan, W.C., Botstein, D., Brown, P.O., 2000. 'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns. Genome Biol. 1(2).
-
-
-
-
28
-
-
0033818954
-
A concise guide to cDNA microarray analysis
-
(2000)
Biotechniques
, vol.29
, Issue.3
, pp. 548-556
-
-
Hegde, P.1
Qi, R.2
Abernathy, K.3
Gay, C.4
Dharap, S.5
Gaspard, R.6
Hughes, J.E.7
Snesrud, E.8
Lee, N.9
Quackenbush, J.10
-
31
-
-
0032826179
-
Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
-
(1999)
Bioinformatics
, vol.15
, Issue.7-8
, pp. 563-577
-
-
Hertz, G.Z.1
Stormo, G.D.2
-
35
-
-
0034616930
-
Functional discovery via a compendium of expression profiles
-
(2000)
Cell
, vol.102
, Issue.1
, pp. 109-126
-
-
Hughes, T.R.1
Marton, M.J.2
Jones, A.R.3
Roberts, C.J.4
Stoughton, R.5
Armour, C.D.6
Bennett, H.A.7
Coffey, E.8
Dai, H.9
He, Y.D.10
Kidd, M.J.11
King, A.M.12
Meyer, M.R.13
Slade, D.14
Lum, P.Y.15
Stepaniants, S.B.16
Shoemaker, D.D.17
Gachotte, D.18
Chakraburtty, K.19
Simon, J.20
Bard, M.21
Friend, S.H.22
more..
-
39
-
-
0034086773
-
Automatic discovery of regulatory patterns in promoter regions based on whole cell expression data and functional annotation
-
(2000)
Bioinformatics
, vol.16
, Issue.4
, pp. 326-333
-
-
Jensen, L.J.1
Knudsen, S.2
-
42
-
-
0002672412
-
-
Self-Organizing Maps, Berlin: Springer
-
(1997)
-
-
Kohonen, T.1
-
48
-
-
84891817569
-
Extracting structured motifs using a suffix-tree - Algorithms and application to promoter consensus identification
-
Proceedings RECOMB'2000, Tokyo
-
(2000)
-
-
Marsan, L.1
Sagot, M.F.2
-
50
-
-
0016942292
-
A space-economical suffix tree construction algorithm
-
(1976)
J. ACM
, vol.23
, Issue.2
, pp. 262-272
-
-
McCreight, E.M.1
-
51
-
-
0002496441
-
-
MGED. Microarray Gene Expression Database Group,
-
-
-
-
52
-
-
0002615619
-
-
Möller, S., Vilo, J., Croning, M.D.R., 2001. Prediction of the coupling specificity of GPCRs to their G proteins. Proceedings of ISMB 2001. Bioinformatics, S174-S181.
-
-
-
-
57
-
-
0034704248
-
Genome-wide location and function of DNA binding proteins
-
(2000)
Science
, vol.290
, Issue.5500
, pp. 2306-2309
-
-
Ren, B.1
Robert, F.2
Wyrick, J.J.3
Aparicio, O.4
Jennings, E.G.5
Simon, I.6
Zeitlinger, J.7
Schreiber, J.8
Hannett, N.9
Kanin, E.10
Volkert, T.L.11
Wilson, C.J.12
Bell, S.P.13
Young, R.A.14
-
59
-
-
17744363430
-
First pass annotation of promoters on human chromosome 22
-
(2001)
Genome Res.
, vol.11
, Issue.3
, pp. 333-340
-
-
Scherf, M.1
Klingenhoff, A.2
Frech, K.3
Quandt, K.4
Schneider, R.5
Grote, K.6
Frisch, M.7
Gailus-Durner, V.8
Seidel, A.9
Brack-Werner, R.10
Werner, T.11
-
62
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
(1998)
Mol. Biol. Cell.
, vol.9
, Issue.12
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
64
-
-
0033027794
-
Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, Issue.6
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zhu, Q.4
Kitareewan, S.5
Dmitrovsky, E.6
Lander, E.S.7
Golub, T.R.8
-
67
-
-
0001704377
-
Constructing suffix trees on-line in linear time
-
(1995)
Algorithmica
, vol.14
, Issue.3
, pp. 249-260
-
-
Ukkonen, E.1
-
71
-
-
0002467730
-
-
Vilo, J., 1998. Discovering Frequent Patterns from Strings. Technical Report C-1998-9. Department of Computer Science, University of Helsinki, pp. 20.
-
-
-
-
72
-
-
0002669934
-
-
Vilo, J., 2001. Expression Profiler.
-
-
-
-
74
-
-
0002494527
-
-
Wang J., Shapiro B., Shasha A. (Eds.), Pattern Discovery in Biomolecular Data, New York: Oxford University Press
-
(1999)
-
-
-
75
-
-
0033394535
-
Genes regulated cooperatively by one or more transcription factors and their identification in whole eukaryotic genomes
-
(1999)
Bioinformatics
, vol.15
, Issue.10
, pp. 776-784
-
-
Wagner, A.1
-
76
-
-
0032776529
-
Models for prediction and recognition of eukaryotic promoters
-
(1999)
Mamm. Genome
, vol.10
, pp. 168-175
-
-
Werner, T.1
-
77
-
-
0035162272
-
Database resources of the National Center for Biotechnology Information
-
(2001)
Nucleic Acids Res.
, vol.29
, Issue.1
, pp. 11-16
-
-
Wheeler, D.L.1
Church, D.M.2
Lash, A.E.3
Leipe, D.D.4
Madden, T.L.5
Pontius, J.U.6
Schuler, G.D.7
Schriml, L.M.8
Tatusova, T.A.9
Wagner, L.10
Rapp, B.A.11
-
78
-
-
0033976586
-
TRANSFAC: an integrated system for gene expression regulation
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 316-319
-
-
Wingender, E.1
Chen, X.2
Hehl, R.3
Karas, H.4
Liebich, I.5
Matys, V.6
Meinhardt, T.7
Prüß, M.8
Reuter, I.9
Schacherer, F.10
-
81
-
-
0031967332
-
Identification of human gene core promoters in silico
-
(1998)
Genome Res.
, vol.8
, Issue.3
, pp. 319-326
-
-
Zhang, M.Q.1
-
82
-
-
0032863227
-
Large-scale gene expression data analysis: a new challenge to computational biologists
-
(1999)
Genome Res.
, vol.9
, Issue.8
, pp. 681-688
-
-
Zhang, M.Q.1
-
83
-
-
0033563516
-
Promoter analysis of co-regulated genes in the yeast genome
-
(1999)
Comput. Chem.
, vol.23
, Issue.3-4
, pp. 233-250
-
-
Zhang, M.Q.1
-
84
-
-
0033643183
-
Cluster, function and promoter: analysis of yeast expression array
-
Pacific Symposium on Biocomputing
-
(2000)
, pp. 479-490
-
-
Zhu, J.1
Zhang, M.Q.2
|