-
1
-
-
0030724031
-
Compartmentalization of eukaryotic gene expression: Causes and effects
-
Singer, R. H., and Green, M. R. (1997) Compartmentalization of eukaryotic gene expression: causes and effects. Cell 91, 291-294
-
(1997)
Cell
, vol.91
, pp. 291-294
-
-
Singer, R.H.1
Green, M.R.2
-
2
-
-
0031214128
-
Chromatin domains and nuclear compartments: Establishing sites of gene expression in eukaryotic nuclei
-
Jackson, D. A. (1997) Chromatin domains and nuclear compartments: establishing sites of gene expression in eukaryotic nuclei. Mol. Biol. Rep. 24, 209-220
-
(1997)
Mol. Biol. Rep.
, vol.24
, pp. 209-220
-
-
Jackson, D.A.1
-
3
-
-
0031834613
-
The cellular organization of gene expression
-
Misteli, T., and Spector, D. L. (1998) The cellular organization of gene expression. Curr. Opin. Cell Biol. 10, 323-331
-
(1998)
Curr. Opin. Cell Biol.
, vol.10
, pp. 323-331
-
-
Misteli, T.1
Spector, D.L.2
-
4
-
-
0031707751
-
Alteration of nucleosome structure as a mechanism of transcriptional regulation
-
Workman, J. L., and Kingston, R. E. (1998) Alteration of nucleosome structure as a mechanism of transcriptional regulation. Annu. Rev. Biochem. 67, 545-579
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 545-579
-
-
Workman, J.L.1
Kingston, R.E.2
-
5
-
-
0032488855
-
Eukaryotic transcription: An interlaced network of transcription factors and chromatin-modifying machines
-
Kadonaga, J. T. (1998) Eukaryotic transcription: an interlaced network of transcription factors and chromatin-modifying machines. Cell 92, 307-313
-
(1998)
Cell
, vol.92
, pp. 307-313
-
-
Kadonaga, J.T.1
-
6
-
-
0029972551
-
Contacts in context: Promoter specificity and macromolecular interactions in transcription
-
Goodrich, J. A., Cutler, G., and Tjian, R. (1996) Contacts in context: promoter specificity and macromolecular interactions in transcription. Cell 84, 825-830
-
(1996)
Cell
, vol.84
, pp. 825-830
-
-
Goodrich, J.A.1
Cutler, G.2
Tjian, R.3
-
7
-
-
0029846871
-
The general transcription factors of RNA polymerase II
-
Orphanides, G., Lagrange, T., and Reinberg, D. (1996) The general transcription factors of RNA polymerase II. Genes Dev. 10, 2657-2683
-
(1996)
Genes Dev.
, vol.10
, pp. 2657-2683
-
-
Orphanides, G.1
Lagrange, T.2
Reinberg, D.3
-
8
-
-
0032493038
-
Muscle development: A transcriptional pathway in myogenesis
-
Taylor, M.V. (1998) Muscle development: a transcriptional pathway in myogenesis. Curr. Biol. 8, 356-358
-
(1998)
Curr. Biol.
, vol.8
, pp. 356-358
-
-
Taylor, M.V.1
-
9
-
-
0032584567
-
Regulation of a transcription factor network required for differentiation and metabolism
-
Duncan, S. A., Navas, M. A., Dufort, D., Rossant, J., and Stoffel, M. (1998) Regulation of a transcription factor network required for differentiation and metabolism. Science 281, 692-695
-
(1998)
Science
, vol.281
, pp. 692-695
-
-
Duncan, S.A.1
Navas, M.A.2
Dufort, D.3
Rossant, J.4
Stoffel, M.5
-
10
-
-
0032567037
-
The role of TAFs in RNA polymerase II transcription
-
Hahn, S. (1998) The role of TAFs in RNA polymerase II transcription. Cell 95, 579-582
-
(1998)
Cell
, vol.95
, pp. 579-582
-
-
Hahn, S.1
-
11
-
-
0021943255
-
Eukaryotic RNA polymerases
-
Sentenac, A. (1985) Eukaryotic RNA polymerases. Crit. Rev. Biochem. 18, 31-90
-
(1985)
Crit. Rev. Biochem.
, vol.18
, pp. 31-90
-
-
Sentenac, A.1
-
12
-
-
0025739871
-
RNA polymerase II
-
Young, R. A. (1991) RNA polymerase II. Annu. Rev. Biochem. 60, 689-715
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 689-715
-
-
Young, R.A.1
-
13
-
-
0030961651
-
RNA polymerase II holoenzyme and transcription regulation
-
Greenblatt, J. (1997) RNA polymerase II holoenzyme and transcription regulation. Curr. Opin. Cell Biol. 9, 310-319
-
(1997)
Curr. Opin. Cell Biol.
, vol.9
, pp. 310-319
-
-
Greenblatt, J.1
-
14
-
-
0031037856
-
The C-terminal domain of RNA polymerase II couples mRNA processing to transcription
-
McCracken, S., Fong, N., Yankulov, K., Ballantyne, S., Pan, G., Greenblatt, J., Patterson, S. D., Wickens, M., and Bentley, D. L. (1997) The C-terminal domain of RNA polymerase II couples mRNA processing to transcription. Nature (London) 385, 357-361
-
(1997)
Nature (London)
, vol.385
, pp. 357-361
-
-
McCracken, S.1
Fong, N.2
Yankulov, K.3
Ballantyne, S.4
Pan, G.5
Greenblatt, J.6
Patterson, S.D.7
Wickens, M.8
Bentley, D.L.9
-
15
-
-
0030680252
-
Origins of mRNA identity: Capping enzymes bind to the phosphorylated C-terminal domain of the RNA polymerase II
-
Shuman, S. (1997) Origins of mRNA identity: capping enzymes bind to the phosphorylated C-terminal domain of the RNA polymerase II. Proc. Natl. Acad. Sci. USA 94, 12758-12760
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 12758-12760
-
-
Shuman, S.1
-
16
-
-
0032480229
-
RNA polymerase II is an essential mRNA polyadenylation factor
-
Hirose, Y., and Manley, J. L. (1998) RNA polymerase II is an essential mRNA polyadenylation factor. Nature (London) 395, 93-96
-
(1998)
Nature (London)
, vol.395
, pp. 93-96
-
-
Hirose, Y.1
Manley, J.L.2
-
17
-
-
0031841947
-
A human RNA polymerase II complex containing factors that modify chromatin structure
-
Cho, H., Orphanides, G., Sun, X., Yang, X.-J., Ogryzko, V., Lees, E., Nakatami, T., and Reinberg, D. (1998) A human RNA polymerase II complex containing factors that modify chromatin structure. Mol. Cell. Biol. 18, 5355-5363
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 5355-5363
-
-
Cho, H.1
Orphanides, G.2
Sun, X.3
Yang, X.-J.4
Ogryzko, V.5
Lees, E.6
Nakatami, T.7
Reinberg, D.8
-
19
-
-
0015491070
-
Morphological studies of transcription
-
Miller, O. L., Jr., and Bakken, A. H. (1972) Morphological studies of transcription. Acta Endocrinol. Suppl. 167, 155-177
-
(1972)
Acta Endocrinol. Suppl.
, vol.167
, pp. 155-177
-
-
Miller, O.L.1
Bakken, A.H.2
-
20
-
-
0031813779
-
Numbers and organization of RNA polymerases, nascent transcripts, and transcription units in HeLa nuclei
-
Jackson, D. A., Iborra, F. J., Manders, E. M. M., and Cook, P. R. (1998) Numbers and organization of RNA polymerases, nascent transcripts, and transcription units in HeLa nuclei. Mol. Biol. Cell 9, 1523-1536
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 1523-1536
-
-
Jackson, D.A.1
Iborra, F.J.2
Manders, E.M.M.3
Cook, P.R.4
-
21
-
-
0342385139
-
Methylation and processing of ribosomal RNA in HeLa cells
-
Greenberg, H., and Penman, S. (1966) Methylation and processing of ribosomal RNA in HeLa cells. J. Mol. Biol. 21, 527-535
-
(1966)
J. Mol. Biol.
, vol.21
, pp. 527-535
-
-
Greenberg, H.1
Penman, S.2
-
22
-
-
0015243434
-
Regulation of the synthesis and the stability of ribosomal RNA during contact inhibition of growth
-
Emerson, C. P., Jr. (1971) Regulation of the synthesis and the stability of ribosomal RNA during contact inhibition of growth. Nature (London) New Biol. 232, 101-106
-
(1971)
Nature (London) New Biol.
, vol.232
, pp. 101-106
-
-
Emerson C.P., Jr.1
-
23
-
-
0021099528
-
Identification and quantitation of levels of protein synthesis initiation factors in crude HeLa cell lysates by two-dimensional polyacrylamide gel electrophoresis
-
Duncan, R., and Hershey, J. W. (1983) Identification and quantitation of levels of protein synthesis initiation factors in crude HeLa cell lysates by two-dimensional polyacrylamide gel electrophoresis. J. Biol. Chem. 258, 7228-7235
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 7228-7235
-
-
Duncan, R.1
Hershey, J.W.2
-
24
-
-
0028837312
-
The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced
-
Tennyson, C. N., Klamut, H. J., and Worton, R. G. (1995) The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced. Nat. Genet. 9, 184-190
-
(1995)
Nat. Genet.
, vol.9
, pp. 184-190
-
-
Tennyson, C.N.1
Klamut, H.J.2
Worton, R.G.3
-
25
-
-
0032562720
-
Visualization of single RNA transcripts in situ
-
Femino, A. M., Fay, F. S., Fogarty, K., and Singer, R. H. (1998) Visualization of single RNA transcripts in situ. Science 280, 585-590
-
(1998)
Science
, vol.280
, pp. 585-590
-
-
Femino, A.M.1
Fay, F.S.2
Fogarty, K.3
Singer, R.H.4
-
26
-
-
0026006495
-
Progression of the cell cycle through mitosis leads to abortion of nascent transcripts
-
Shermoen, A. W., and O'Farrell, P. H. (1991) Progression of the cell cycle through mitosis leads to abortion of nascent transcripts. Cell 67, 303-310
-
(1991)
Cell
, vol.67
, pp. 303-310
-
-
Shermoen, A.W.1
O'Farrell, P.H.2
-
27
-
-
0027157980
-
Rapid changes in Drosophila transcription after an instantaneous heat shock
-
O'Brien, T., and Lis, J. T. (1993) Rapid changes in Drosophila transcription after an instantaneous heat shock. Mol. Cell. Biol. 13, 3456-3463
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 3456-3463
-
-
O'Brien, T.1
Lis, J.T.2
-
28
-
-
0016166609
-
Stability of nuclear RNA in mammalian cells
-
Brandhorst, B. P., and McConkey, E. H. (1974) Stability of nuclear RNA in mammalian cells. J. Mol. Biol. 85, 451-463
-
(1974)
J. Mol. Biol.
, vol.85
, pp. 451-463
-
-
Brandhorst, B.P.1
McConkey, E.H.2
-
29
-
-
0017167820
-
Ribonucleic acid synthesis in rabbit erythroid cells
-
Hunt, J. A. (1976) Ribonucleic acid synthesis in rabbit erythroid cells. Biochem J. 160, 727-744
-
(1976)
Biochem J.
, vol.160
, pp. 727-744
-
-
Hunt, J.A.1
-
30
-
-
0014341371
-
The turnover of nuclear DNA-like RNA in HeLa cells
-
Soeiro, R., Vaughan, M. H., Warner, J. R., and Darnell, J. E., Jr. (1968) The turnover of nuclear DNA-like RNA in HeLa cells. J. Cell Biol. 39, 112-118
-
(1968)
J. Cell Biol.
, vol.39
, pp. 112-118
-
-
Soeiro, R.1
Vaughan, M.H.2
Warner, J.R.3
Darnell J.E., Jr.4
-
31
-
-
0342819928
-
Nuclear ribonucleic acid
-
Harris, H. (1963) Nuclear ribonucleic acid. Prog. Nucleic Acids Res. 2, 19-59
-
(1963)
Prog. Nucleic Acids Res.
, vol.2
, pp. 19-59
-
-
Harris, H.1
-
32
-
-
0018166569
-
Intranuclear migration of newly synthesized extranucleolar ribonucleoproteins: A high resolution quantitative and cytochemical study
-
Puvion, E., and Moyne, G. (1978) Intranuclear migration of newly synthesized extranucleolar ribonucleoproteins: a high resolution quantitative and cytochemical study. Exp. Cell Res. 115, 79-88
-
(1978)
Exp. Cell Res.
, vol.115
, pp. 79-88
-
-
Puvion, E.1
Moyne, G.2
-
33
-
-
0017849586
-
Quantification of hepatic transcribing RNA polymerase molecules, polyribonucleotide elongation rates and messenger RNA complexity in fed and fasted rats
-
Coupar, B. E. H., Davies, J. A., and Chesterton, C. J. (1978) Quantification of hepatic transcribing RNA polymerase molecules, polyribonucleotide elongation rates and messenger RNA complexity in fed and fasted rats. Eur. J. Biochem. 84, 611-623
-
(1978)
Eur. J. Biochem.
, vol.84
, pp. 611-623
-
-
Coupar, B.E.H.1
Davies, J.A.2
Chesterton, C.J.3
-
34
-
-
0016284972
-
Transcription of the genes for 5S ribosomal RNA and transfer RNA in isolated mouse myeloma cell nuclei
-
Marzluff, W. F., Jr., Murphy, E. C., Jr., and Huang, R. C. C. (1974) Transcription of the genes for 5S ribosomal RNA and transfer RNA in isolated mouse myeloma cell nuclei. Biochemistry 13, 3689-3696
-
(1974)
Biochemistry
, vol.13
, pp. 3689-3696
-
-
Marzluff W.F., Jr.1
Murphy E.C., Jr.2
Huang, R.C.C.3
-
35
-
-
0017227404
-
Transcription of specific genes in isolated nuclei from HeLa cells in vitro
-
Udvardy, A., and Seifart, K. H. (1976) Transcription of specific genes in isolated nuclei from HeLa cells in vitro. Eur. J. Biochem. 62, 353-363
-
(1976)
Eur. J. Biochem.
, vol.62
, pp. 353-363
-
-
Udvardy, A.1
Seifart, K.H.2
-
36
-
-
0033561153
-
Regional specialization in human nuclei: Visualization of discrete sites of transcription by RNA polymerase III
-
Pombo, A., Jackson D. A, Hollinshead, M., Wang, Z., Roeder, R. G., and Cook, P. R. (1999) Regional specialization in human nuclei: visualization of discrete sites of transcription by RNA polymerase III. EMBO J. 18, 2241-2253
-
(1999)
EMBO J.
, vol.18
, pp. 2241-2253
-
-
Pombo, A.1
Jackson, D.A.2
Hollinshead, M.3
Wang, Z.4
Roeder, R.G.5
Cook, P.R.6
-
37
-
-
0016253752
-
Animal DNA-dependent RNA polymerases. 12. Determination of the cellular number of RNA polymerase B molecules
-
Cochet-Meilhac, M., Nuret, P., Courvalin, J. C., and Chambon, P. (1974) Animal DNA-dependent RNA polymerases. 12. Determination of the cellular number of RNA polymerase B molecules. Biochim. Biophys. Acta 353, 185-192
-
(1974)
Biochim. Biophys. Acta
, vol.353
, pp. 185-192
-
-
Cochet-Meilhac, M.1
Nuret, P.2
Courvalin, J.C.3
Chambon, P.4
-
38
-
-
0032808150
-
Quantitation of RNA polymerase II and its transcription factors in an HeLa cell: Little soluble holoenzyme but significant amounts of polymerases attach to the nuclear substructure
-
Kimura, H., Tao, Y., Roeder, R. G., and Cook, P. R. (1999) Quantitation of RNA polymerase II and its transcription factors in an HeLa cell: little soluble holoenzyme but significant amounts of polymerases attach to the nuclear substructure. Mol. Cell. Biol. 19, 5383-5392
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 5383-5392
-
-
Kimura, H.1
Tao, Y.2
Roeder, R.G.3
Cook, P.R.4
-
39
-
-
0022160149
-
RNP particles at splice junction sequences on Drosophila chorion transcripts
-
Osheim, Y. N., Miller, O. L., Jr., and Beyer, A. L. (1985) RNP particles at splice junction sequences on Drosophila chorion transcripts. Cell 43, 143-151
-
(1985)
Cell
, vol.43
, pp. 143-151
-
-
Osheim, Y.N.1
Miller O.L., Jr.2
Beyer, A.L.3
-
40
-
-
0019793527
-
Visualization of the major late R strand transcription unit of adenovirus serotype 2
-
Beyer, A. L., Bouton, A. H., Hodge, L. D., and Miller, O. L. (1981) Visualization of the major late R strand transcription unit of adenovirus serotype 2. J. Mol. Biol. 147, 269-295
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 269-295
-
-
Beyer, A.L.1
Bouton, A.H.2
Hodge, L.D.3
Miller, O.L.4
-
41
-
-
0019796564
-
Visualization of nascent RNA transcripts and simultaneous transcription and replication in viral nucleoprotein complexes from adenovirus 2-infected HeLa cells
-
Wolgemuth, D. J., and Hsu, M.-T. (1981) Visualization of nascent RNA transcripts and simultaneous transcription and replication in viral nucleoprotein complexes from adenovirus 2-infected HeLa cells. J. Mol. Biol. 147, 247-268
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 247-268
-
-
Wolgemuth, D.J.1
Hsu, M.-T.2
-
42
-
-
0019230277
-
The ultrastructural visualization of nucleolar and extranucleolar RNA synthesis and distribution
-
Fakan, S., and Puvion, E. (1980) The ultrastructural visualization of nucleolar and extranucleolar RNA synthesis and distribution. Int. Rev. Cytol. 65, 225-299
-
(1980)
Int. Rev. Cytol.
, vol.65
, pp. 225-299
-
-
Fakan, S.1
Puvion, E.2
-
43
-
-
0030589683
-
Ultrastructure of the nucleus in relation to transport and splicing: Roles of perichromatin fibrils and interchromatin granules
-
Puvion, E., and Puvion-Dutilleul, F. (1996) Ultrastructure of the nucleus in relation to transport and splicing: roles of perichromatin fibrils and interchromatin granules. Exp. Cell Res. 229, 217-225
-
(1996)
Exp. Cell Res.
, vol.229
, pp. 217-225
-
-
Puvion, E.1
Puvion-Dutilleul, F.2
-
44
-
-
0027499230
-
Visualization of focal sites of transcription within human nuclei
-
Jackson, D. A., Hassan, A. B., Errington, R. J., and Cook, P. R. (1993) Visualization of focal sites of transcription within human nuclei. EMBO J. 12, 1059-1065
-
(1993)
EMBO J.
, vol.12
, pp. 1059-1065
-
-
Jackson, D.A.1
Hassan, A.B.2
Errington, R.J.3
Cook, P.R.4
-
45
-
-
0027305616
-
Fluorescent labeling of nascent RNA reveals transcription by RNA polymerase II in domains scattered throughout the nucleus
-
Wansink, D. G., Schul, W., van der Kraan, I., van Steensel, B., van Driel, R., and de Jong, L. (1993) Fluorescent labeling of nascent RNA reveals transcription by RNA polymerase II in domains scattered throughout the nucleus. J. Cell Biol. 12, 283-293
-
(1993)
J. Cell Biol.
, vol.12
, pp. 283-293
-
-
Wansink, D.G.1
Schul, W.2
Van Der Kraan, I.3
Van Steensel, B.4
Van Driel, R.5
De Jong, L.6
-
46
-
-
0031585858
-
Quantitative digital analysis of diffuse and concentrated nuclear distributions of nascent transcripts, SC35 and poly(A)
-
Fay, F. S., Taneja, K. L., Shenoy, S., Lifshitz, L., and Singer, R. H. (1997) Quantitative digital analysis of diffuse and concentrated nuclear distributions of nascent transcripts, SC35 and poly(A). Exp. Cell Res. 231, 27-37
-
(1997)
Exp. Cell Res.
, vol.231
, pp. 27-37
-
-
Fay, F.S.1
Taneja, K.L.2
Shenoy, S.3
Lifshitz, L.4
Singer, R.H.5
-
47
-
-
0029973080
-
Active RNA polymerases are localized within discrete transcription 'factories' in human nuclei
-
Iborra, F. J., Pombo, A., Jackson, D. A., and Cook, P. R. (1996) Active RNA polymerases are localized within discrete transcription 'factories' in human nuclei. J. Cell Sci. 109, 1427-1436
-
(1996)
J. Cell Sci.
, vol.109
, pp. 1427-1436
-
-
Iborra, F.J.1
Pombo, A.2
Jackson, D.A.3
Cook, P.R.4
-
48
-
-
0032917782
-
Ultrastructural analysis of transcription and splicing in the cell nucleus after Bromo-UTP microinjection
-
Cmarko, D., Verschure, P. J., Martin, T. E., Dahmus, M. E., Krause, S., Fu, X.-D., van Driel, R., and Fakan, S. (1999) Ultrastructural analysis of transcription and splicing in the cell nucleus after Bromo-UTP microinjection. Mol. Biol. Cell 10, 211-223
-
(1999)
Mol. Biol. Cell
, vol.10
, pp. 211-223
-
-
Cmarko, D.1
Verschure, P.J.2
Martin, T.E.3
Dahmus, M.E.4
Krause, S.5
Fu, X.-D.6
Van Driel, R.7
Fakan, S.8
-
49
-
-
0031044482
-
RNA transport
-
Nakielny, S., Fischer, U., Michael, W. M., and Dreyfuss, G. (1997) RNA transport. Annu. Rev. Neurosci. 20, 269-301
-
(1997)
Annu. Rev. Neurosci.
, vol.20
, pp. 269-301
-
-
Nakielny, S.1
Fischer, U.2
Michael, W.M.3
Dreyfuss, G.4
-
50
-
-
0029891101
-
The structure and function of proteins involved in mammalian pre-mRNA splicing
-
Kramer, A. (1996) The structure and function of proteins involved in mammalian pre-mRNA splicing. Annu. Rev. Biochem. 65, 367-409
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 367-409
-
-
Kramer, A.1
-
51
-
-
0033059981
-
Formation of mRNA 3′ ends in eukaryotes: Mechanism, regulation, and interrelations with other steps in mRNA synthesis
-
Zhao, J., Hyman, L., and Moore, C. (1999) Formation of mRNA 3′ ends in eukaryotes: mechanism, regulation, and interrelations with other steps in mRNA synthesis. Microbiol. Mol. Biol. Rev. 63, 405-445
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 405-445
-
-
Zhao, J.1
Hyman, L.2
Moore, C.3
-
53
-
-
0014432829
-
Localization and kinetics of formation of nuclear heterodispersed RNA, cytoplasmic heterodispersed RNA and polyribosome-associated messenger RNA in HeLa cells
-
Penman, S., Vesco, C., and Penman, M. (1968) Localization and kinetics of formation of nuclear heterodispersed RNA, cytoplasmic heterodispersed RNA and polyribosome-associated messenger RNA in HeLa cells. J. Mol. Biol. 34, 49-69
-
(1968)
J. Mol. Biol.
, vol.34
, pp. 49-69
-
-
Penman, S.1
Vesco, C.2
Penman, M.3
-
54
-
-
0017031323
-
HnRNA in HeLa cells: Distribution of transcript sizes estimated from nascent molecule profiles
-
Derman, E., Goldberg, S., and Darnell, J. E., Jr. (1976) HnRNA in HeLa cells: distribution of transcript sizes estimated from nascent molecule profiles. Cell 9, 465-472
-
(1976)
Cell
, vol.9
, pp. 465-472
-
-
Derman, E.1
Goldberg, S.2
Darnell J.E., Jr.3
-
56
-
-
0019332437
-
Sequence complexity of nuclear and messenger RNA in HeLa cells
-
Holland, C. A., Mayrand, S., and Pederson, T. (1980) Sequence complexity of nuclear and messenger RNA in HeLa cells. J. Mol. Biol. 138, 755-778
-
(1980)
J. Mol. Biol.
, vol.138
, pp. 755-778
-
-
Holland, C.A.1
Mayrand, S.2
Pederson, T.3
-
57
-
-
0016345602
-
Three abundance classes in HeLa cell messenger RNA
-
Bishop, J. O., Morton, J. G., Rosbash, M., and Richardson, M. (1974) Three abundance classes in HeLa cell messenger RNA. Nature (London) 250, 199-204
-
(1974)
Nature (London)
, vol.250
, pp. 199-204
-
-
Bishop, J.O.1
Morton, J.G.2
Rosbash, M.3
Richardson, M.4
-
58
-
-
0028789793
-
Serial analysis of gene expression
-
Velculescu, V. E., Zhang, L., Vogelstein, B., and Kinzler, K. W. (1995) Serial analysis of gene expression. Science 270, 484-487
-
(1995)
Science
, vol.270
, pp. 484-487
-
-
Velculescu, V.E.1
Zhang, L.2
Vogelstein, B.3
Kinzler, K.W.4
-
59
-
-
0030962307
-
Gene expression profiles in normal and cancer cells
-
Zhang, L., Zhou, W., Velculescu, V. E., Kern, S. E., Hruban, R. H., Hamilton, S. R., Vogelstein, B., and Kinzler, K. W. (1997) Gene expression profiles in normal and cancer cells. Science 276, 1268-1272
-
(1997)
Science
, vol.276
, pp. 1268-1272
-
-
Zhang, L.1
Zhou, W.2
Velculescu, V.E.3
Kern, S.E.4
Hruban, R.H.5
Hamilton, S.R.6
Vogelstein, B.7
Kinzler, K.W.8
-
60
-
-
0032567081
-
Dissecting the regulatory circuitry of a eukaryotic genome
-
Holstege, F. C. P., Jennings, E. G., Wyrick, J. J., Lee, T. I., Hengartner, C. J., Green, M. R., Golub, T. R., Lander, E. S., and Young, R. A. (1998) Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95, 717-728
-
(1998)
Cell
, vol.95
, pp. 717-728
-
-
Holstege, F.C.P.1
Jennings, E.G.2
Wyrick, J.J.3
Lee, T.I.4
Hengartner, C.J.5
Green, M.R.6
Golub, T.R.7
Lander, E.S.8
Young, R.A.9
-
61
-
-
0032903908
-
The transcriptional program in the response of human fibroblasts to serum
-
Iyer, V. R., Eisen, M. B., Ross, D. T., Schuler, G., Moore, T., Lee, J. C. F., Trent, J. M., Staudt, L. M., Hudson, J., Jr., Boguski, M. S., Lashkari, D., Shalon, D., Botstein, D., and Brown, P. O. (1999) The transcriptional program in the response of human fibroblasts to serum. Science 283, 83-87
-
(1999)
Science
, vol.283
, pp. 83-87
-
-
Iyer, V.R.1
Eisen, M.B.2
Ross, D.T.3
Schuler, G.4
Moore, T.5
Lee, J.C.F.6
Trent, J.M.7
Staudt, L.M.8
Hudson J., Jr.9
Boguski, M.S.10
Lashkari, D.11
Shalon, D.12
Botstein, D.13
Brown, P.O.14
-
62
-
-
0032101924
-
A method for analyzing the qualitative and quantitative aspects of gene expression: A transcriptional profile revealed for HeLa cells
-
Ryo, A., Kondoh, N., Wakatsuki, T., Hada, A., Yamamoto, N., and Yamamoto, M. (1998) A method for analyzing the qualitative and quantitative aspects of gene expression: a transcriptional profile revealed for HeLa cells. Nucleic Acids Res. 26, 2586-2592
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 2586-2592
-
-
Ryo, A.1
Kondoh, N.2
Wakatsuki, T.3
Hada, A.4
Yamamoto, N.5
Yamamoto, M.6
-
63
-
-
0029738143
-
Stability of the human dystrophin transcript in muscle cells
-
Tennyson, C. N., Qinwei, S., and Worton, R. G. (1996) Stability of the human dystrophin transcript in muscle cells. Nucleic Acids Res. 24, 3059-3064
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 3059-3064
-
-
Tennyson, C.N.1
Qinwei, S.2
Worton, R.G.3
-
64
-
-
0029122344
-
Compartmentalization of specific pre-mRNA metabolism: An emerging view
-
Moen, P. T., Smith, K. P., and Lawrence, J. B. (1995) Compartmentalization of specific pre-mRNA metabolism: an emerging view. Hum. Mol. Genet. 4, 1779-1789
-
(1995)
Hum. Mol. Genet.
, vol.4
, pp. 1779-1789
-
-
Moen, P.T.1
Smith, K.P.2
Lawrence, J.B.3
-
65
-
-
0033593806
-
Processing of endogenous pre-mRNAs in association with SC-35 domains is gene specific
-
Smith, K. P., Moen, P. T., Jr., Wynder, K. L., Coleman, J. R., and Lawrence, J. B. (1999) Processing of endogenous pre-mRNAs in association with SC-35 domains is gene specific. J. Cell Biol. 144, 617-629
-
(1999)
J. Cell Biol.
, vol.144
, pp. 617-629
-
-
Smith, K.P.1
Moen, P.T.2
Wynder, K.L.3
Coleman, J.R.4
Lawrence, J.B.5
-
66
-
-
0032185810
-
Localization of ASH1 mRNA particles in living yeast
-
Bertrand, E., Chartrand, P., Schaefer, M., Shenoy, S. M., Singer, R. H., and Long, R. M. (1998) Localization of ASH1 mRNA particles in living yeast. Mol. Cell 2, 437-445
-
(1998)
Mol. Cell
, vol.2
, pp. 437-445
-
-
Bertrand, E.1
Chartrand, P.2
Schaefer, M.3
Shenoy, S.M.4
Singer, R.H.5
Long, R.M.6
-
67
-
-
0025786160
-
Discrete nuclear domains of poly(A)RNA and their relationship to the functional organization of the nucleus
-
Carter, K. C., Taneja, K. L., and Lawrence, J. B. (1991) Discrete nuclear domains of poly(A)RNA and their relationship to the functional organization of the nucleus. J. Cell Biol. 115, 1191-1202
-
(1991)
J. Cell Biol.
, vol.115
, pp. 1191-1202
-
-
Carter, K.C.1
Taneja, K.L.2
Lawrence, J.B.3
-
69
-
-
0025815557
-
Localization of pre-messenger RNA at discrete nuclear sites
-
Wang, J., Cao, L.-G., Wang, Y.-L., and Pederson, T. (1991) Localization of pre-messenger RNA at discrete nuclear sites. Proc. Natl. Acad. Sci. USA 88, 7391-7395
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 7391-7395
-
-
Wang, J.1
Cao, L.-G.2
Wang, Y.-L.3
Pederson, T.4
-
70
-
-
0033517103
-
Purification and biochemical characterization of interchromatin granule clusters
-
Mintz, P. J., Patterson, S. D., Neuwald, A. F., Spahr, C. S., and Spector, D. L. (1999) Purification and biochemical characterization of interchromatin granule clusters. EMBO J. 18, 4308-4320
-
(1999)
EMBO J.
, vol.18
, pp. 4308-4320
-
-
Mintz, P.J.1
Patterson, S.D.2
Neuwald, A.F.3
Spahr, C.S.4
Spector, D.L.5
-
71
-
-
0015924880
-
Further evidence on the nuclear origin and transfer to the cytoplasm of polyadenylic acid sequences in mammalian cell RNA
-
Jelinek, W., Adesnik, M., Salditt, M., Sheiness, D., Wall, R., Molloy, G., Philipson, L., and Darnell, J. E. (1973) Further evidence on the nuclear origin and transfer to the cytoplasm of polyadenylic acid sequences in mammalian cell RNA. J. Mol. Biol. 75, 515-532
-
(1973)
J. Mol. Biol.
, vol.75
, pp. 515-532
-
-
Jelinek, W.1
Adesnik, M.2
Salditt, M.3
Sheiness, D.4
Wall, R.5
Molloy, G.6
Philipson, L.7
Darnell, J.E.8
-
72
-
-
0033080534
-
Spatial organization of four hnRNP proteins in relation to sites of transcription, to nuclear speckles, and to each other in interphase nuclei and nuclear matrices of HeLa cells
-
Mattern, K. A., van der Kraan, L. Schul, W., de Jong, L., and van Driel, R. (1999) Spatial organization of four hnRNP proteins in relation to sites of transcription, to nuclear speckles, and to each other in interphase nuclei and nuclear matrices of HeLa cells. Exp. Cell Res. 246, 461-470
-
(1999)
Exp. Cell Res.
, vol.246
, pp. 461-470
-
-
Mattern, K.A.1
Van Der Kraan, L.2
Schul, W.3
De Jong, L.4
Van Driel, R.5
-
73
-
-
0033153543
-
RNA polymerase 11 targets pre-mRNA splicing factors to transcription sites in vivo
-
Misteli, T., and Spector, D. L. (1999) RNA polymerase 11 targets pre-mRNA splicing factors to transcription sites in vivo. Mol. Cell 3, 697-705
-
(1999)
Mol. Cell
, vol.3
, pp. 697-705
-
-
Misteli, T.1
Spector, D.L.2
-
74
-
-
0033553878
-
Intron-independent association of splicing factors with active genes
-
Jolly, C., Vourc'h, C., Robert-Nicoud, M., and Morimoto, R. I. (1999) Intron-independent association of splicing factors with active genes. J. Cell Biol. 145, 1133-1143
-
(1999)
J. Cell Biol.
, vol.145
, pp. 1133-1143
-
-
Jolly, C.1
Vourc'h, C.2
Robert-Nicoud, M.3
Morimoto, R.I.4
-
75
-
-
0031670145
-
The path of transcripts from extra-nucleolar synthetic sites to nuclear pores: Transcripts in transit are concentrated in discrete structures containing SR proteins
-
Iborra, F. J., Jackson, D. A., and Cook, P. R. (1998) The path of transcripts from extra-nucleolar synthetic sites to nuclear pores: transcripts in transit are concentrated in discrete structures containing SR proteins. J. Cell Sci. 111, 2269-2282
-
(1998)
J. Cell Sci.
, vol.111
, pp. 2269-2282
-
-
Iborra, F.J.1
Jackson, D.A.2
Cook, P.R.3
-
76
-
-
0033602460
-
Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells
-
Politz, J.C., Tuft, R.A., Pederson, T., and Singer, R.H. (1999) Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells. Curr. Biol. 9, 285-291
-
(1999)
Curr. Biol.
, vol.9
, pp. 285-291
-
-
Politz, J.C.1
Tuft, R.A.2
Pederson, T.3
Singer, R.H.4
-
77
-
-
0030826364
-
Intergenic transcription and transinduction of the human β-globin locus
-
Ashe, H. L., Monks, J., Wijgerde, M., Fraser, P., and Proudfoot, N.J. (1997) Intergenic transcription and transinduction of the human β-globin locus. Genes Dev. 11, 2494-2509
-
(1997)
Genes Dev.
, vol.11
, pp. 2494-2509
-
-
Ashe, H.L.1
Monks, J.2
Wijgerde, M.3
Fraser, P.4
Proudfoot, N.J.5
-
78
-
-
0030880815
-
X chromosome inactivation is mediated by Xist RNA stabilization
-
Panning, B., Dausman, J., and Jaenisch, R. (1997) X chromosome inactivation is mediated by Xist RNA stabilization. Cell 90, 907-916
-
(1997)
Cell
, vol.90
, pp. 907-916
-
-
Panning, B.1
Dausman, J.2
Jaenisch, R.3
-
79
-
-
0029165020
-
MRNA stability in mammalian cells
-
Ross, J. (1995) mRNA stability in mammalian cells. Microbiol. Rev. 59, 423-450
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 423-450
-
-
Ross, J.1
-
80
-
-
0030963268
-
Function and synthesis of small nucleolar RNAs
-
Tollervey, D., and Kiss, T. (1997) Function and synthesis of small nucleolar RNAs. Curr. Opin. Cell Biol. 9, 337-342
-
(1997)
Curr. Opin. Cell Biol.
, vol.9
, pp. 337-342
-
-
Tollervey, D.1
Kiss, T.2
-
81
-
-
0030964892
-
Nuclear domains of the RNA subunit of RNase P
-
Jacobson, M. R., Cao, L. G., Taneja, K., Singer, R. H., Wang, Y. L., and Pederson, T. (1997) Nuclear domains of the RNA subunit of RNase P. J. Cell Sci. 110, 829-837
-
(1997)
J. Cell Sci.
, vol.110
, pp. 829-837
-
-
Jacobson, M.R.1
Cao, L.G.2
Taneja, K.3
Singer, R.H.4
Wang, Y.L.5
Pederson, T.6
-
82
-
-
0032727868
-
The exosome: A proteasome for RNA?
-
van Hoof, A., and Parker R. (1999) The exosome: a proteasome for RNA? Cell 99, 347-350
-
(1999)
Cell
, vol.99
, pp. 347-350
-
-
Van Hoof, A.1
Parker, R.2
-
83
-
-
0021799874
-
Constitutive and conditional suppression of exogenous and endogenous genes by anti-sense RNA
-
Izant, J. G., and Weintraub, H. (1985) Constitutive and conditional suppression of exogenous and endogenous genes by anti-sense RNA. Science 229, 345-352
-
(1985)
Science
, vol.229
, pp. 345-352
-
-
Izant, J.G.1
Weintraub, H.2
-
84
-
-
0030203333
-
In vitro and in vivo action of antisense RNA
-
Nellen, W., and Sczakiel, G. (1996) In vitro and in vivo action of antisense RNA. Mol. Biotechnol. 6, 7-15
-
(1996)
Mol. Biotechnol.
, vol.6
, pp. 7-15
-
-
Nellen, W.1
Sczakiel, G.2
-
85
-
-
0029330286
-
When cells stop making sense: Effects of nonsense codons on RNA metabolism in vertebrate cells
-
Maquat, L. E. (1995) When cells stop making sense: effects of nonsense codons on RNA metabolism in vertebrate cells. RNA 1, 453-465
-
(1995)
RNA
, vol.1
, pp. 453-465
-
-
Maquat, L.E.1
-
86
-
-
0032006979
-
Nonsense surveillance in lymphocytes
-
Li, S., and Wilkinson, M. F. (1998) Nonsense surveillance in lymphocytes. Immunity 8, 135-141
-
(1998)
Immunity
, vol.8
, pp. 135-141
-
-
Li, S.1
Wilkinson, M.F.2
-
87
-
-
0031815772
-
Contribution of growing RNA molecules to the nuclear transcripts foci observed by FISH
-
Jolly, C., Robert-Nicoud, M., and Vourc'h, C. (1998) Contribution of growing RNA molecules to the nuclear transcripts foci observed by FISH. Exp. Cell Res. 238, 299-304
-
(1998)
Exp. Cell Res.
, vol.238
, pp. 299-304
-
-
Jolly, C.1
Robert-Nicoud, M.2
Vourc'h, C.3
-
88
-
-
0032479079
-
Going the distance: A current view of enhancer action
-
Blackwood, E. M., and Kadonaga, J. T. (1998) Going the distance: a current view of enhancer action. Science 281, 61-63
-
(1998)
Science
, vol.281
, pp. 61-63
-
-
Blackwood, E.M.1
Kadonaga, J.T.2
-
89
-
-
0031861637
-
Locus control regions, chromatin activation and transcription
-
Fraser, P., and Grosveld, F. (1998) Locus control regions, chromatin activation and transcription. Curr. Opin. Cell Biol. 10, 361-365
-
(1998)
Curr. Opin. Cell Biol.
, vol.10
, pp. 361-365
-
-
Fraser, P.1
Grosveld, F.2
-
90
-
-
0033521532
-
Dividing the empire: Boundary chromatin elements delimit the territory of enhancers
-
Udvardy, A. (1999) Dividing the empire: boundary chromatin elements delimit the territory of enhancers. EMBO J. 18, 1-8
-
(1999)
EMBO J.
, vol.18
, pp. 1-8
-
-
Udvardy, A.1
-
91
-
-
0024300166
-
Transgenes as probes for active chromosomal domains in mouse development
-
Allen, N. D., Cran, D. G., Barton, S. C., Hettle, S., Reik, W., and Surani, M. A. (1988) Transgenes as probes for active chromosomal domains in mouse development. Nature (London) 333, 852-855
-
(1988)
Nature (London)
, vol.333
, pp. 852-855
-
-
Allen, N.D.1
Cran, D.G.2
Barton, S.C.3
Hettle, S.4
Reik, W.5
Surani, M.A.6
-
92
-
-
0025002967
-
Patterns of expression of position-dependent transgenes in mouse embryo
-
Bonnerot, C., Grimber, G., Briand, P., and Nicolas, J.-F. (1990) Patterns of expression of position-dependent transgenes in mouse embryo. Proc. Natl. Acad. Sci. USA 87, 6331-6335
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 6331-6335
-
-
Bonnerot, C.1
Grimber, G.2
Briand, P.3
Nicolas, J.-F.4
-
93
-
-
0029791261
-
Functional compartmentalization of the nucleus
-
Strouboulis, J., and Wolffe A. P. (1996) Functional compartmentalization of the nucleus. J. Cell Sci. 109, 1991-2000
-
(1996)
J. Cell Sci.
, vol.109
, pp. 1991-2000
-
-
Strouboulis, J.1
Wolffe, A.P.2
-
94
-
-
0032562608
-
Structure and function in the nucleus
-
Lamond, A. I., and Earnshaw, W. C. (1998) Structure and function in the nucleus. Science 280, 547-553
-
(1998)
Science
, vol.280
, pp. 547-553
-
-
Lamond, A.I.1
Earnshaw, W.C.2
-
95
-
-
0027490718
-
Determination of mRNA fate by different RNA polymerase II promoters
-
Enssle, J., Kugler, W., Hentze, M. W., and Kulozik, A. E. (1993) Determination of mRNA fate by different RNA polymerase II promoters. Proc. Natl. Acad. Sci. USA 90, 10091-10095
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 10091-10095
-
-
Enssle, J.1
Kugler, W.2
Hentze, M.W.3
Kulozik, A.E.4
-
96
-
-
0033559693
-
Intronless mRNA transport elements may affect multiple steps of pre-mRNA processing
-
Huang, Y., Wimler, K., and Carmichael, G. G. (1999) Intronless mRNA transport elements may affect multiple steps of pre-mRNA processing. EMBO J. 18, 1642-1652
-
(1999)
EMBO J.
, vol.18
, pp. 1642-1652
-
-
Huang, Y.1
Wimler, K.2
Carmichael, G.G.3
-
97
-
-
0023424069
-
Specificity of RNA maturation pathways: RNAs transcribed by RNA polymerase III are not substrates for splicing or polyadenylation
-
Sisodia, S. S., Sollner-Webb, B., and Cleveland, D. W. (1987) Specificity of RNA maturation pathways: RNAs transcribed by RNA polymerase III are not substrates for splicing or polyadenylation. Mol. Cell. Biol. 7, 3602-3612
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 3602-3612
-
-
Sisodia, S.S.1
Sollner-Webb, B.2
Cleveland, D.W.3
-
98
-
-
0023726107
-
The intron requirement for immunoglobulin gene expression is dependent upon the promoter
-
Neuberger, M. S., and Williams, G. T. (1988) The intron requirement for immunoglobulin gene expression is dependent upon the promoter. Nucleic Acids Res. 16, 6713-6724
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 6713-6724
-
-
Neuberger, M.S.1
Williams, G.T.2
-
99
-
-
0033546210
-
The organization of replication and transcription
-
Cook, P. R. (1999) The organization of replication and transcription. Science 284, 1790-1795
-
(1999)
Science
, vol.284
, pp. 1790-1795
-
-
Cook, P.R.1
-
100
-
-
0031763366
-
Factors regulating the transcriptional elongation activity of RNA polymerase II
-
Shilatifard, A. (1998) Factors regulating the transcriptional elongation activity of RNA polymerase II. FASEB J. 12, 1437-1446
-
(1998)
FASEB J.
, vol.12
, pp. 1437-1446
-
-
Shilatifard, A.1
-
101
-
-
0031983653
-
Neurexins: Three genes and 1001 products
-
Missler, M., and Sudhof, T. C. (1998) Neurexins: three genes and 1001 products. Trends Genet. 14, 20-26
-
(1998)
Trends Genet.
, vol.14
, pp. 20-26
-
-
Missler, M.1
Sudhof, T.C.2
-
103
-
-
0032538297
-
Motors driving mRNA localization: New insights from in vivo imaging
-
Arn, E. A., and Macdonald, P. M. (1998) Motors driving mRNA localization: new insights from in vivo imaging. Cell 95, 151-154
-
(1998)
Cell
, vol.95
, pp. 151-154
-
-
Arn, E.A.1
Macdonald, P.M.2
|