Transcriptional transgene silencing and chromatin components

Plant Molecular Biology

Volumn 43, Issue 2-3, 2000, Pages 221-234

  Meyer, P ^a  

^a UNIVERSITY OF LEEDS   (United Kingdom)

Author keywords

Chromatin remodelling; DNA methylation; Epigenetics; Heterochromatin; Histone acetylation; Transcriptional silencing

Indexed keywords

CHROMATIN; GENE DELETION; GENE EXPRESSION REGULATION; GENETIC REGULATION; GENETIC TRANSCRIPTION; PROMOTER REGION; TRANSGENE;

ANIMALIA;

EID: 0033828434     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/a:1006483428789     Document Type: Article

References (107)

1. Role for N-CoR and histone deacetylase in Sin3-mediated transcriptional repression
2. Repression of the mouse M-lysozyme gene involves both hindrance of enhancer factor binding to the methylated enhancer and histone deacetylation
3. Mad: A heterodimeric partner for Max that antagonizes Myc transcriptional activity
4. Mad-Max transcription repression is mediated by ternary complex formation with mammalian homologs of yeast repressor Sin3
5. The acetylation patterns of histones H3 and H4 along Vicia faba chromosomes are different
6. DNA methylation and tissue-specific transcription of the storage protein genes of maize
7. Tetrahymena histone acetyltransferase A: A homolog to yeast Gcn5 linking histone acetylation to gene activation
8. Two DNA-binding factors recognize specific sequences at silencers, upstream activating sequences, autonomously replicating sequences, and telomeres in Saccharomyces cerevisiae
9. Biochemistry and structural biology of transcription factor IID
10. Chromatin remodelling machines: Similar motors, ulterior motives
11. Nuclear receptor coactivator ACTR is a novel histone acetyltransferase and forms a multimeric activation complex with P/CAF and CBP/p300
12. Epigenetic silencing of RNA polymerase I transcription: A role for DNA methylation and histone modification in nucleolar dominance
13. Genetic modification of heterochromatic association and nuclear organization in Drosophila
14. Something from nothing: The evolution and utility of satellite repeats
15. Regulated nuclear translocation of the Mig1 glucose repressor
16. Transcriptional silencing and lamins
17. A pairing-sensitive element that mediates trans-inactivation is associated with the Drosophila brown gene
18. DNA methylation models histone acetylation
19. Repression domain of the yeast global repressor Tup1 interacts directly with histones H3 and H4
20. Trichostatin A inhibits both ras-induced neurite outgrowth of PC12 cells and morphological transformation of N1H3T3 cells
21. Functional elements in Drosophila melanogaster heterochromation
22. A polycomb-group gene regulates homeotic gene expression in Arabidopsis
23. Maternal control of embryogenesis by medea, a Polycomb group gene in Arabidopsis
24. Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: A molecular model for the formation of heterochromatin in yeast
25. A complex containing N-CoR, mSin3 and histone deacetylase mediates transcriptional repression
26. A DNA methyltransferase homolog with a chromodomain exists in multiple polymorphic forms in arabidopsis
27. Transcriptional repression directed by the yeast alpha 2 protein in vitro
28. A histone octamer-like structure within TFIID
29. Differential immunostaining of plant chromosomes by antibodies recognizing acetylated histone H4 variants
30. Cis-effects of heterochromatin on heterochromatic and euchromatic gene activity in Drosophila melanogaster
31. Facilitated binding of a TATA-binding protein to nucleosomal DNA
32. Transgenic tobacco plants expressing the Drosophila Polycomb (Pc) chromodomain show developmental alterations: Possible role of Pc chromodomain proteins in chromatin-mediated gene regulation in plants
33. ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor
34. Factor-stimulated RNA polymerase II transcribes at physiological elongation rates on naked DNA but very poorly on chromatin templates
35. The DNA methylation locus DDM1 is required for maintenance of gene silencing in Arabidopsis
36. Maintenance of genomic methylation requires a SWI2/SNF2-like protein
37. How does DNA methylation repress transcription?
38. The p150 and p60 subunits of chromatin assembly factor 1: A molecular link between newly synthesised histones and DNA replication
39. SSN6-TUP1 is a general repressor of trancription in yeast
40. Heterochromatin protein 1 is required for correct chromosome segregation in Drosophila embryos
41. Heterochromatin protein 1 distribution during development and during the cell cycle in Drosophila embryos
42. DNA methylation affects the formation of active chromatin
43. Repression and activation by multiprotein complexes that alter chromatin structure
44. Different types of maize histone deacetylases are distinguished by a highly complex substrate and site specificity
45. Histone acetylases and deacetylases in cell proliferation
46. Histone deacetylases associated with the mSin3 corepressor mediate Mad transcriptional repression
47. A gene complex controlling segmentation in Drosophila
48. Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA
49. Beta-phaseolin gene activation is a two-step process: PvALF-facilitated chromatin modification followed by abscisic acid-mediated gene activation
50. Architectural specificity in chromatin structure at the TATA box in vivo: Nucleosome displacement upon β-phaseolin gene activation
51. Dosage-dependent modifiers of position effect variegation in Drosophila and mass action model that explains their effect
52. Histone acetylation: New facts - Old questions
53. Crystal structure of the nucleosome core particle at 2.8Å resolution
54. Identification of maize histone deacetylase HD2 as an acidic nucleolar phosphoprotein
55. Histone acetyltransferases during the cell cycle and differentiation of Physarum polycephalum
56. Chromatin structure of the yeast SUC2 promoter in regulatory mutants
57. Recombinant yeast TFIID, a general transcription factor, mediates activation by the gene-specific factor USF in a chromatin assembly assay
58. A correlation between development time and variegated position effect in Drosophila melanogaster
59. Histone gene multiplicity and position effect variegation in D. melanogaster
60. DNA tumour virus transforming proteins and the cell cycle
61. Butyrate suppression of position-effect variegation in Drosophila melanogaster
62. MeCP2 is a transcriptional repressor with abundant binding sites in genomic chromatin
63. Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
64. DNA methylation and chromatin modification
65. Topology and reorganisation of a human TFIID-promoter complex
66. The transcriptional coactivators p300 and CBP are histone acetyltransferases
67. Mutations in FIE, a WD polycomb group gene, allow endosperm development without fertilization
68. Mechanisms of heritable gene repression during development of Drosophila
69. The polycomb protein shares a homologous domain with a heterochromatin-associated protein in Drosophila
70. What's up and down with histone deacetylation and transcription?
71. The SWI-SNF complex: A chromatin remodeling machine?
72. Loss of transcriptional activity of a transgene is accompanied by DNA methylation and histone deacetylation and is prevented by insulators
73. Changes in chromosomal localization of heterochromatin-binding proteins during the cell cycle in Drosophila
74. Role for ADA/GCN5 products in antagonizing chromatin-mediated transcriptional repression
75. Position-effect variegation and chromatin proteins
76. Chromatin-mediated transcriptional repression in yeast
77. Sequence periodicities in chicken nucleosomal DNA
78. Nucleosome disruption at the yeast PHO5 promoter upon PHO5 induction occurs in the absence of DNA replication
79. Trichostatin A causes selective loss of DNA methylation in Neurospora
80. Position-effect variegation in Drosophila
81. A histone octamer can step around a transcribing polymerase without leaving the template
82. Transcription factors vs nucleosomes: Regulation of the PH05 promoter in yeast
83. A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p
84. Alternative chromatin structure at CpG islands
85. Histones and the regulation of heterochromatin in yeast
86. The transcriptional co-activator p/CIP binds CBP and mediated nuclear-receptor function
87. An engine for nucleosome remodeling
88. Purification and properties of an ATP-dependent nucleosome remodelling factor
89. ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor
90. Hist one-H4 isoforms acetylated at specific lysine residues define individual chromosomes and chromatin domains in Drosophila polytene nuclei
91. Functional dissection of the yeast Cyc8-Tup1 transcriptional co-repressor complex
92. Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II
93. Histone deacetylase directs the dominant silencing of transcription in chromatin: Association with MeCP2 and the Mi2 chromodomain SWI SNF ATPase
94. Drosophila CBP represses the transcription factor TCF to antagonise Wingless signalling
95. Diversity and specialization of mammalian SWI/SNF complexes
96. Heterochromatin and gene expression in Drosophila
97. Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection
98. Chromatin: Hanging on to histones
99. A role for nucleosome assembly in both silencing and activation of the Xenopus TRβA gene by the thyroid hormone receptor
100. Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II
101. Gene dosage-dependent embryonic development and proliferation defects in mice lacking the transcription integrator p300
102. Interaction between an integral protein of the nuclear-envelope inner membrane and human chromoadomain proteins homologous to Drosophila HP1
103. 2 phases by trichostatin A
104. Roles of SWI1, SWI2, and SWI3 proteins for transcriptional enhancement by steroid receptors
105. Histone acetylation in chicken erythrocytes. Rates of acetylation and evidence that histones in both active and potentially active chromatin are rapidly modified
106. The dermatomyositis-specific autoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities
107. Regulation of gene expression by oxygen in Saccharomyces cerevisiae