Calcium

Current Opinion in Chemical Biology

Volumn 2, Issue 2, 1998, Pages 293-302

  Evenäs, Johan ^a   Malmendal, Anders ^a   Forsén, Sture ^a  

^a LUND UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

CADHERIN; CALCIUM; CALCIUM BINDING PROTEIN; CALCIUM CHANNEL; CELL RECEPTOR; EPIDERMAL GROWTH FACTOR; FLUORESCENT DYE;

CELL ADHESION; CELL NUCLEUS; CHEMICAL STRUCTURE; CHEMISTRY; METABOLISM; PHYSIOLOGY; REVIEW; SIGNAL TRANSDUCTION;

CADHERINS; CALCIUM; CALCIUM CHANNELS; CALCIUM-BINDING PROTEINS; CELL ADHESION; CELL NUCLEUS; EPIDERMAL GROWTH FACTOR; FLUORESCENT DYES; MODELS, MOLECULAR; RECEPTORS, CYTOPLASMIC AND NUCLEAR; SIGNAL TRANSDUCTION;

EID: 0032043591     PISSN: 13675931     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1367-5931(98)80072-0     Document Type: Article

References (100)

1. 2+ signalling field, with an integration of a vast amount of independent experimental data into a coherent model.
2. 2+ concentrations.
3. Sako Y, Sekihata A, Yanagisawa Y, Yamamoto M, Shimada Y, Ozaki K, Kusumi A: Comparison of two-photon excitation laser scanning microscopy with UV-confocal laser scanning microscopy in three-dimensional calcium imaging using the fluorescence indicator Indo-1. J Microsc 1997, Pt 1:9-20.
4. 2+ based on green fluorescent proteins and calmodulin. Nature 1997, 388:882-887.
5. Putney JW: Capacitive calcium entry revisited. Cell Calcium 1990, 11:611-624.
6. 2+ stores in a sympathetic neuron cell line. Cell Calcium 1996, 19:399-407.
7. 2+ uptake by the mitochondria.
8. Pizzo P, Fasolato C, Pozzan T: Dynamic properties of an inositol 1,4,5-trisphosphate- and thapsigargin-insensitive calcium pool in mammalian cell lines. J Cell Biol 1997, 136:355-366.
9. 2+ signaling. Curr Opin Neurobiol 1997, 7:339-345. A brief summary of biochemical and structural information of the inositol-1,4,5-trisphosphate receptor covering the period up to the end of 1996.
10. Yoshida Y, Imai S: Structure and function of inositol 1,4,5-trisphosphate receptor. Jpn J Pharmacol 1997, 74:125-137.
11. 2+ release from inositol trisphosphate-sensitive stores in rat hepatocytes. J Physiol (Lond) 1992, 455:623-640.
12. 2+. J Membr Biol 1997, 159:179-185.
13. Lee HC, Aarhus R: A derivative of NADP mobilizes calcium stores insensitive to inositol trisphosphate and cyclic ADP-ribose. J Biol Chem 1995, 270:2152-2157.
14. 2+ release. J Biol Chem 1997, 272:7669-7675.
15. 2+ release by NAADP+. J Biol Chem 1996, 271:8513-8516.
16. 2+ release. J Biol Chem 1996, 271:11599-11602.
17. Parker I, Yao Y, Ilyin V: Fast kinetics of calcium liberation induced in Xenopus oocytes by photoreleased inositol trisphosphate. Biophys J 1996, 70:222-237.
18. 2+ release onset.
19. Thomas AP, Bird GSJ, Hajnóczky G, Robb-Gaspers LD, Putney JW Jr: Spatial and temporal aspects of cellular calcium signaling. FASEB J 1996, 10:1505-1517.
20. 3 and confocal laser scanning microscopy.
21. Li XY, Stojilkovic SS, Keizer J, Rinzel J: Sensing and refilling calcium stores in an excitable cell. Biophys J 1997, 72:1080-1091.
22. 2+ channel: an allosteric model. J Theor Biol 1997, 186:307-326.
23. Carafoli E: Plasma membrane calcium pump: Structure, function and relationships. Basic Res Cardiol 1997, 92:59-61.
24. Allbritton NL, Meyer T, Stryer L: Range of messenger action of calcium ion and inositol 1,4,5-trisphosphate. Science 1992, 258:1812-1815.
25. 2+ release channels in mammalian tissues and cell lines. Biochem J 1997, 327:251-258.
26. 3R on the membrane surface of bovine cerebrellar Purkinje cells. The tetrameric arrangement of the subunits is clearly demonstrated.
27. 2+ binding site in the type 1 inositol 1,4,5-trisphosphate receptor. J Biol Chem 1996, 271:27005-27012.
28. Tunwell RE, Wickenden C, Bertrand BM, Shevchenko VI, Walsh MB, Allen PD, Lai FA: The human cardiac muscle ryanodine receptor-calcium release channel: identification, primary structure and topological analysis. Biochem J 1996, 318:477-487.
29. 2+ differentially regulates the ligand-affinity states of type 1 and type 3 inositol 1,4,5-trisphosphate receptors. Biochem J 1997, 322:591-596.
30. Brown GR, Köhler M, Berggren P-O: Parallel changes in nuclear and cytosolic calcium in mouse pancreatic β-cells. Biochem J 1997, 1997:771-778.
31. Perez-Terzic C, Jaconi M, Clapham D: Nuclear calcium and the regulation of the nuclear pore complex. Bioessays 1997, 19:787-792.
32. Allbritton NL, Oancea E, Kuhn MA, Meyer T: Source of nuclear calcium signals. Proc Natl Acad Sci USA 1994, 91:12458-12462.
33. Al-Mohanna FA, Caddy KW, Bolsover SR: The nucleus is insulated from large cytosolic calcium ion changes. Nature 1994, 367:745-750.
34. 3Rs on the inner nuclear membrane.
35. 2+ from the nuclear envelope. Cell 1995, 80:439-444.
36. 2+ waves in rat hepatocyte nuclei.
37. 2+/calmodulin-dependent protein kinase IV gene and its protein products. Recent Prog Horm Res 1997, 52:389-407.
38. 2+-binding constants and dissociation rates of calmodulin in complexes with peptides and intact proteins.
39. Kretsinger RH: EF-hands reach out Nat Struct Biol 1996, 3:12-15.
40. Strynadka NCJ, James MNG: Crystal structures of the helix-loop-helix calcium-binding proteins. Annu Rev Biochem 1989, 58:951-998.
41. Falke JJ, Drake SK, Hazard AL, Peersen O: Molecular tuning of ion binding to calcium signaling proteins. Q Rev Biophys 1994, 27:219-290.
42. Linse S, Forsén S: Determinants that govern high-affinity calcium binding. Adv Second Messenger Phosphoprotein Res 1995, 30:89-151.
43. Drake SK, Lee KL, Falke JJ: Tuning the equilibrium ion affinity and selectivity of the EF-hand calcium binding motif: Substitutions at the gateway positions. Biochemistry 1996, 35:6697-6705.
44. Drake SK, Zimmer MA, Miller CL, Falke JJ: Optimizing the metal binding parameters of an EF-hand-like calcium chelation loop: Coordinating side chains play a more important tuning role than chelation flexibility. Biochemistry 1997, 36:9917-9926.
45. Drake SK, Zimmer MA, Kundrot C, Falke JJ: Molecular tuning of an EF-hand-like calcium binding loop: Contributions of the coordinating side chain at loop position 3. J Gen Physiol 1997, 110:173-184.
46. Wu X, Reid RE: Structure/calcium affinity relationships of site III of calmodulin: Testing the acid pair hypothesis using calmodulin mutants. Biochemistry 1997, 36:8649-8656.
47. George SE, Su Z, Fan D, Wang S, Johnson JD: The fourth EF-hand of calmodulin and its helix-loop-helix components: Impact on calcium binding and enzyme activation. Biochemistry 1996, 35:8307-8313.
48. 2+ on target recognition by calmodulin. Biochemistry 1997, 36:4309-4316.
49. 2+-saturated states.
50. Chazin WJ: Releasing the calcium trigger. Nat Struct Biol 1995, 2:707-710.
51. 2+ binding.
52. Gagné SM, Li MX, Sykes BD: Mechanism of the direct coupling between binding and induced structural change in regulatory calcium binding proteins. Biochemistry 1997, 36:4386-4392.
53. 2+ binding. The critical role of this bidentate ligand in site I is emphasized.
54. Spyracopoulous L, Li MX, Sia SK, Gagné SM, Chandra M, Solaro RL, Sykes BD: Calcium-induced structural transition in the regulatory domain of human cardiac troponin C. Biochemistry 1997, 36:12138-12146.
55. 2+-binding proteins.
56. 2+/CaM-dependent protein ki-nase I in the autoinhibited form.
57. Ikura M, Clore GM, Gronenborn AM, Zhu G, Klee CB, Bax A: Solution structure of a calmodulin-target peptide complex by multidimensional NMR. Science 1992, 256:632-638.
58. Brown SE, Martin SR, Bayley PM: Kinetic control of the dissociation pathway of calmodulin-peptide complexes. J Biol Chem 1997, 272:3389-3397.
59. Martin SR, Bayley PM, Brown SE, Porumb T, Zhang M, Ikura M: Spectroscopic characterization of a high-affinity calmodulin-target peptide hybride molecule. Biochemistry 1996, 35:3508-3517.
60. Chin D, Means AR: Methionine to glutamine substitutions in the C-terminal domain of calmodulin impair the activation of three protein kinases. J Biol Chem 1996, 271:30465-30471.
61. Browne JP, Strom M, Martin SR, Bayley PM: The role of β-sheet interactions in domain stability, folding, and target recognition reactions of calmodulin. Biochemistry 1997, 36:9550-9561.
62. 2+-dependent inhibition of G protein-coupled receptor kinase 2 by calmodulin. Biochemistry 1997, 36:1315-1321.
63. 1H NMR studies on the structures of peptides from the calmodulin-binding domains of inducible and endothelial nitric-oxide synthase in solution and complex with calmodulin. J Biol Chem 1997, 272:23050-23056.
64. Stevens-Truss R, Beckingham K, Marletta MA: Calcium binding sites of calmodulin and electron transfer by neuronal nitric oxide synthase. Biochemistry 1997, 36:12337-12345.
65. 2+ level is suggested to module the activity through CaM-activation.
66. Houdusse A, Cohen C: Structure of the regulatory domain of scallop myosin at 2A resolution: Implications for regulation. Structure 1996, 4:21-32.
67. 2+. A model for subunit dimerization in calpain is presented.
68. 2+-bound domain VI of porcine calpain is presented. A model for subunit dimerization in calpain is given.
69. Kretsinger RH: EF-hands embrace. Nat Struct Biol 1997, 4:514-516.
70. Nalefski EA, Falke JJ: The C2 domain calcium-binding motif: Structural and functional diversity. Protein Sci 1996, 5:2375-2390. An ambitious compilation of the knowledge so far collected on C2 domains.
71. Essen LO, Perisic O, Cheung R, Katan M, Williams RL: Crystal structure of a mammalian phosphoinositide-specific phospholipase Cδ. Nature 1996, 380:595-602. The structure described here gives important clues to the function of a multidomain protein, phospholipase Cδ, involved in phospholipid signaling.
72. •].
73. 2+-dependent interactions of two different C2 domains.
74. 2+ binding proteins.
75. Kishore U, Eggleton P, Reid KD: Modular organization of carbohydrate recognition domains in animal lectins. Matrix Biol 1997, 15:583-592.
76. Brown MS, Herz J, Goldstein JL: Calcium cages, acid baths and recycling receptors. Nature 1997, 388:629-630. The authors give a pleasant introduction to the low-density lipoprotein receptor.
77. 2+ or that serve as scaffolding residues.
78. Blacklow SC, Kim PS: Protein folding and calcium binding defects arising from familial hypercholesterolemia mutations of the LDL-receptor. Nat Struct Biol 1996, 3:758-762.
79. 2+-free GLA domain sheds light on membrane binding of blood coagulation proteins. Nat Struct Biol 1995, 6:504-509.
80. Freedman SJ, Blostein MD, Baleja JD, Jacobs M, Furie BC, Furie B: Identification of the phospholipid binding site in the vitamin K-dependent blood coagulation protein factor IX. J Biol Chem 1996, 271:16227-16236.
81. 2+ positions determined by a genetic algorithm. Biochemistry 1997, 36:2132-2138.
82. 2+ binding motifs in EGF-like domains. Nature 1991, 351:164-167.
83. Stenflo J, Oehlin AK, Persson E, Valcare C, Astermark J, Drakenberg T, Selander M, Björk I: Epidermal growth factor-like domains in the vitamin K-dependent clotting factors. Some structure-function relationships. Ann NY Acad Sci 1991, 614:11-29.
84. 2+-binding epidermal growth factor-like domain: its role in protein-protein interactions. Cell 1995, 82:131-141.
85. Dietz HC, Pyeritz RE: Mutations in the human gene for fibrillin-1 (FBN1) in the Marfan syndrome and related disorders. Hum Mol Gen 1995, 4:1799-1809.
86. 2+ ion.
87. 2+-stabilized Gla-EGF junction.
88. Chothia C, Jones EY: The molecular structure of cell adhesion molecules. Annu Rev Biochem 1997, 66:823-862.
89. Nagar B, Overduin M, Ikura M, Rini JM: Structural basis of calcium-induced E-cadherin rigidification and dimerization. Nature 1996, 380:360-364. This paper describes an elegant structure determination giving important clues to the mechanism of cell-cell adhesion.
90. 2+-dependent dimerization of E-cadherin fragments contribute significantly to the understanding of these molecules.
91. Lewis JE, Jensen PJ, Johnson KR, Wheelock MJ: E-cadherin mediates adherens junction organization through protein kinase C. J Cell Sci 1994, 107:3615-3621.
92. Shapiro L, Fannon AM, Kwong PD, Thompson A, Lehmann MS, Grübel G, Legrand J-F, Als-Nielsen J, Colman DR, Hendrickson WA: Structural basis of cell-cell adhesion by cadherins. Nature 1995, 374:327-337.
93. Hohenester E, Maurer P, Hohenadl C, Timpl R, Jansonius JN, Engel J: Structure of a novel extracellular calcium-binding module in BM-40. Nat Struct Biol 1996, 3:67-73. The first extracellular EF hand to be discovered is described.
94. Brown EM, Vassilev PM, Hebert SC: Calcium ions as extracellular messengers. Cell 1995, 83:679-682.
95. Gerasimenko OV, Gerasimenko JV, Petersen OH, Tepikin AV: Calcium transport pathways in the nucleus. Pflügers Arch 1996, 432:1-6.
96. Santella L: The cell nucleus: an Eldorado to future calcium research? J Membr Biol 1996, 153:83-92.
97. Kubinowa H, Tjandra N, Grzesiek S, Ren H, Klee CB, Bax A: Solution structure of calcium-free calmodulin. Nat Struct Biol 1995, 2:768-776.
98. Chattopadhyaya R, Meador WE, Means AR, Quiocho FA: Calmodulin structure refined at 1.7 ångströms. J Mol Biol 1992, 228:1177-1192.
99. Ferrin TE, Huang CC, Jarvis LE, Langridge R: The MIDAS display system. J Mol Graphics 1988, 6:13-27.
100. Santella L, Carafoli E: Calcium signalling in the cell nucleus. FASEB J 1997, 11:1091-1109.