The relative orientation of Gla and EGF domains in coagulation factor X is altered by Ca2+ binding to the first EGF domain. A combined NMR-small angle X-ray scattering study

Biochemistry

Volumn 35, Issue 36, 1996, Pages 11547-11559

  Sunnerhagen, Maria ^a,b   Olah, Glenn A ^c   Stenflo, Johan ^a   Forsén, Sture ^a   Drakenberg, Torbjörn ^a   Trewhella, Jill ^c  

^a LUND UNIVERSITY   (Sweden)

^b KAROLINSKA INSTITUTE   (Sweden)

^c LOS ALAMOS NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BLOOD CLOTTING FACTOR 10; EPIDERMAL GROWTH FACTOR;

ARTICLE; BLOOD CLOTTING; CROSS LINKING; MOLECULAR INTERACTION; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN DOMAIN; RADIATION SCATTERING;

1-CARBOXYGLUTAMIC ACID; CALCIUM; EPIDERMAL GROWTH FACTOR; FACTOR X; HUMANS; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; PEPTIDE FRAGMENTS; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SCATTERING, RADIATION; X-RAYS;

EID: 0029840317     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi960633j     Document Type: Article

References (85)

1. Appella, E., Robinson, L. A., Ullrich, S. J., Stoppelli, M. P., Corti, A., Cassani, G., & Blasi, F. (1987) J. Biol. Chem. 262, 4437-4440.
2. Astermark, J., Björk, I., Öhlin, A.-K., & Stenflo, J. (1991) J. Biol. Chem. 266, 2430-2437.
3. Bagby, S., Harvey, T. S., Eagle, S. G., Inouye, S., & Ikura, M. (1994) Structure 2, 107-122.
4. Banner, D. W., D'Arcy, A., Chène, C., Winkler, F. K., Guha, A., Konigsberg, W. H., Nemerson, Y., & Kirchhofer, D. (1996) Nature 380, 41-46.
5. Brandstetter, H., Bauer, M., Huber, R., Lollar, P., & Bode, W. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9796-9800.
6. Brünger, A. T. (1992) X-PLOR version 3.1, Yale University, New Haven, CT.
7. Barlow, P. N., Steinkasserer, A., Norman, D. G., Kieffer, B., Wiles, A. P., Sim, R. B., & Campbell, I. D. (1993) J. Mol. Biol. 232, 268-284.
8. Campbell, I. D., & Bork, P. (1993) Curr. Opin. Struct. Biol. 3, 385-392.
9. Carpenter, G., & Wahl, M. I. (1990) Handbook Exp. Pharmacol. 95, 69-171.
10. Chaing, B. S., Clarke, B., Sridhara, S., Chu, K., Friedman, P., VanDusen, W., Roberts, H. R., Blajchman, M., Monroe, D. M., & High, K. A. (1994) Blood 83, 3524-3535.
11. Chang, J.-Y., Stafford, D. W., & Straight, D. L. (1995) Biochemistry 34, 12227-12232.
12. Chazin, W. J., Rance, M., & Wright, P. E. (1988) J. Mol. Biol. 202, 603-622.
13. Chen, S.-H., & Bendedouch, D. (1986) Methods Enzymol. 130, 79-116.
14. Cheung, W.-F., Straight, D. L., Smith, K. J., Lin, S.-W., Roberts, H. R., & Stafford, D. W. (1991) J. Biol. Chem. 266, 8797-8800.
15. Clore, G. M., Brünger, A. T., Karplus, M., & Gronenborn, A. (1986) J. Mol. Biol. 191, 523-551.
16. Davis, C. G. (1990) New Biol. 2, 410-419.
17. Engel, J. (1989) FEBS Lett. 251, 1-7.
18. Familletti, P. C., Wolitzky, B. A., & Burns, D. K. (1994) Nature 367, 532-538.
19. Freedman, S. J., Furie, B. C., Furie, B., & Baleja, J. D. (1995a) J. Biol. Chem. 270, 7980-7987.
20. Freedman, S. J., Furie, B. C., Furie, B., & Baleja, J. D. (1995b) Biochemistry 34, 12126-12137.
21. Furie, B., & Furie, B. C. (1988) Cell 53, 505-518.
22. Glanville, R. W., Qian, R.-Q., McClure, D. W., & Maslen, C. L. (1994) J. Biol. Chem. 269, 26630-26634.
23. Graves, B. J., Crowter, R. L., Chandran, C., Rumberger, J. M., Li, S., Huang, K.-S., Presky, D. H., & Guinier, A. (1939) Ann. Physiol. (Paris) 12, 161-237.
24. Handford, P. A., Mayhew, M., Baron, W., Winship, P. R., Campbell, I. D., & Brownlee, G. G. (1991) Nature 351, 164-167.
25. Hansen, A. P., Petros, A. M., Meadows, R. P., Nettesheim, D. G., Mazar, A. P., Olejinczak, E. T., Xu, R. X., Pederson, T. M., Henkin, J., & Fesik, S. W. (1994) Biochemistry 33, 4847-4864.
26. Heidorn, D. B., & Trewhella, J. (1988) Biochemistry 27, 909-915.
27. Heidorn, D. B., Seeger, P. A., Rokop, S. E., Blumenthal, D. K., Means, A. R., Crespi, H., & Trewhella, J. (1989) Biochemistry 28, 6757-6764.
28. Hewett, D. R., Lynch, J. R., Smith, R., & Sykes, B. C. (1993) Hum. Mol. Genet. 2, 475-477.
29. Hogg, P. J., Öhlin, A. C., & Stenflo, J. (1992) J. Biol. Chem. 267, 703-706.
30. Husten, E. J., Esmon, C. T., & Johnsson, A. E. (1987) J. Biol. Chem. 262, 12953-12961.
31. Jacobs, M., Freedman, S. J., Furie, B. C., & Furie, B. (1994) J. Biol. Chem. 269, 25494-25501.
32. Jacrot, B., & Zaccai, G (1981) Biopolymers 20, 2413-2426.
33. Johansson, C., Ullner, M., & Drakenberg, T. (1993) Biochemistry 32, 8429-8438.
34. Kim, D. J., Thompson, A. R., & James, H. L. (1995) Hum. Genet. 95, 212-214.
35. Knott, V., Downing, A. K., Cardy, C. M., & Handford, P. (1996) J. Mol. Biol. 255, 22-27.
36. Kotkow, K. J., Furie, B., & Furie, B. C. (1993) J. Biol. Chem. 268, 15633-15639.
37. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
38. Kurosawa, S., Stearns, D. J., Jackson, K. W., & Esmon, C. T. (1988) J. Biol. Chem. 263, 5993-5996.
39. Mann, K. G., Jenny, R. G., & Krishnaswamy, S. (1988) Annu. Rev. Biochem. 57, 915-956.
40. Mann, K. G., Nesheim, M. E., Church, W. R., Haley, P., & Krishnaswamy, S. (1990) Blood 76, 1-16.
41. Medved, L. V., Vysotchin, A., & Ingham, K. C. (1994) Biochemistry 33, 478-485.
42. Moore, P. B. (1980) J. Appl. Crystallogr. 13, 168-175.
43. Nishimura, H., Takeya, H., Miyata, T., Suehiro, K., Okamura, T., Niho, Y., & Iwanaga, S. (1993) J. Biol. Chem. 268, 24041-24046.
44. Öhlin, A.-K., & Stenflo, J. (1987) J. Biol. Chem. 262, 13798-13804.
45. Öhlin, A.-K., Linse, S., & Stenflo, J. (1988) J. Biol. Chem. 263, 7411-7417.
46. Öhlin, A.-K., Björk, I., & Stenflo, J. (1990) Biochemistry 29, 644-651.
47. Olah, G. A., & Trewhella, J. (1994) Biochemistry 33, 12800-12806.
48. Olah, G. A., Trakhanov, S., Trewhella, J., & Quiocho, F. A. (1993) J. Biol. Chem. 268, 16241-16247.
49. Olah, G. A., Rokop, S. E., Wang, C.-L., Blechner, S. L., & Trewhella, J. (1994) Biochemistry 33, 8233-8239.
50. Padmanabhan, K., Padmanabhan, K. B., Tulinsky, A., Park, C. H., Bode, W., Huber, R., Blankenship, D. T., Cardin, A. D., & Kisiel, W. (1993) J. Mol. Biol. 232, 947-966.
51. Persson, E., & Petersen, L. C. (1995) Eur. J. Biochem. 234, 293-300.
52. Persson, E., Selander, M., Linse, S, Drakenberg, T., Öhlin, A.-K., & Stenflo, J. (1989) J. Biol. Chem. 264, 16897-16904.
53. Persson, E., Björk, I., & Stenflo, J. (1991) J. Biol. Chem. 266, 2444-2452.
54. Picot, D., Loll, P. J., & Garavito, R. M. (1994) Nature 367, 243-249.
55. Pilz, I. (1982) in Small-Angle X-ray Scattering (Glatter, O., & Kratky, O., Eds.) pp 244-247, Academic Press, New York.
56. Rao, Z., Handford, P., Mayhew, M., Knott, V., Brownlee, G. G., & Smart, D. (1995) Cell 82, 131-141.
57. Rebay, I., Fleming, R. J., Fehon, R. G., Cherbas, L., Cherbas, P., & Artawanis-Tsakonas, S. (1991) Cell 67, 687-699.
58. Rees, D. J. G., Jones, I. M., Handford, P. A., Walter, S. J., Esnouf, M. P., Smith, K. J., & Brownlee, G. G. (1988) EMBO 7, 2053-2061.
59. Ruf, W., Kalnik, M. W., Lund-Hansen, T., & Edgington, T. S. (1991) J. Biol. Chem. 266, 15719-15725.
60. Ryan, J., Wolitzky, B., Heimer, E., Lambrose, T., Felix, A., Tam, J. P., Huang, L. H., Nawroth, P., Wilner, G., Kisiel, W., Nelsestuen, G. L., & Stern, D. M. (1989) J. Biol. Chem. 264, 20283-20287.
61. Schwalbe, R. A., Ryan, J., Stern, D. M., Kisiel, W., Dahlbäck, B., & Nelsestuen, G. L. (1989) J. Biol. Chem. 264, 20288-20296.
62. Scott, D. L., White, S. P., Otwinowski, Z., Yuan, W., Gelb, M. H., & Sigler, P. B. (1990) Science 250, 1541-1546.
63. Selander, M., Persson, E., Stenflo, J., & Drakenberg, T. (1990) Biochemistry 29, 8111-8118.
64. Selander-Sunnerhagen, M., Ullner, M., Persson, E., Teleman, O., Stenflo, J., & Drakenberg, T. (1992) J. Biol. Chem. 267, 19642-19649.
65. Shapiro, L., Fannon, A. M., Kwong, P. D., Thompson, A., Lehmann, M. S., Grüel, G., Legrand, L.-F., Als-Nielsen, J., Colman, D. R., & Hendrickson, W. A. (1995) Nature 374, 327-337.
66. Smith, B. O., Downing, A. K., Dudgeon, T. J., Cunningham, M., Driscoll, P. C., & Campbell, I. D. (1994) Biochemistry 33, 2422-2429.
67. Smith, B. O., Downing, A. K., Driscoll, P. C., Dudgeon, T. J., & Campbell, I. D. (1995) Structure 3, 823-833.
68. Soriano-Garcia, M., Padmanabhan, K., deVos, A. M., & Tulinsky, A. (1992) Biochemistry 31, 2554-2566.
69. Sosnick, T., Charles, S., Stubbs, G., Yau, P., Bradbury, E. M., Timmins, P., & Trewhella, J. (1991) Biophys. J. 60, 1178-1189.
70. Stenflo, J. (1991) Blood 78, 1637-1651.
71. Stenflo, J., Lundwall, D Å., & Dahlbäck, B. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 368-372.
72. Stenflo, J., Öhlin, A.-K., Owen, W., & Schneider, W. J. (1988) J. Biol. Chem. 263, 21-24.
73. Strynadka, N. C. J., & James, M. N. G. (1989) Annu. Rev. Biochem. 58, 951-998.
74. Strynadka, N. C. J., & James, M. N. G. (1991) Curr. Opin. Struct. Biol. 1, 905-914.
75. Sunnerhagen, M., Forsèn, S., Hoffren, A.-M., Drakenberg, T., Teleman, O., & Stenflo, J. (1995) Nat. Struct. Biol. 2, 504-509.
76. Swairjo, M. A., Concha, N. O., Kaetzel, M. A., Dedman, J. R., & Seaton, B. A. (1995) Nat. Struct. Biol. 2, 968-974.
77. Toomey, J. R., Smith, K. J., & Stafford, D. W. (1991) J. Biol. Chem. 266, 19198-19202.
78. Toomey, J. R., Smith, K. J., Roberts, H. R., & Stafford, D. W. (1992) Biochemistry 31, 1806-1808.
79. Tulinsky, A., Park, C. H., & Skrzypczak-Jakun, E. (1988) J. Mol. Biol. 202, 885-901.
80. Ullner, M., Selander, M., Persson, E., Stenflo, J., Drakenberg, T., & Teleman, O. (1992) Biochemistry 31, 5974-5983.
81. Valcarce, C., Selander-Sunnerhagen, M., Taemlitz, A.-M., Drakenberg, T., Björk, I., & Stenflo, J. (1993) J. Biol. Chem. 268, 26673-26678.
82. Valcarce, C., Holmgren, A., & Stenflo, J. (1994) J. Biol. Chem. 269, 26011-26016.
83. Wu, Y.-S., Bevilaqua, V. L. H., & Berg. J. M. (1995) Chem. Biol. 2, 91-97.
84. Zhang, L., & Castellino, F. J. (1992) J. Biol. Chem. 267, 26078-26084.
85. Zhang, L., Jhingan, A., & Castellino, F. J. (1992) Blood 80, 942-952.