-
1
-
-
33749011189
-
Animal models of inflammatory bowel disease: Lessons from enteric infections
-
[CrossRef] [PubMed]
-
Eckmann, L. Animal models of inflammatory bowel disease: Lessons from enteric infections. Ann. N. Y. Acad. Sci. 2006, 1072, 28–38. [CrossRef] [PubMed]
-
(2006)
Ann. N. Y. Acad. Sci
, vol.1072
, pp. 28-38
-
-
Eckmann, L.1
-
2
-
-
84863115325
-
Berberine promotes recovery of colitis and inhibits inflammatory responses in colonic macrophages and epithelial cells in DSS-treated mice
-
[CrossRef] [PubMed]
-
Yan, F.; Wang, L.; Shi, Y.; Cao, H.; Liu, L.; Washington, M.K.; Chaturvedi, R.; Israel, D.A.; Cao, H.; Wang, B.; et al. Berberine promotes recovery of colitis and inhibits inflammatory responses in colonic macrophages and epithelial cells in DSS-treated mice. Am. J. Physiol. Gastrointest. Liver Physiol. 2012, 302, G504–G514. [CrossRef] [PubMed]
-
(2012)
Am. J. Physiol. Gastrointest. Liver Physiol
, vol.302
, pp. G504-G514
-
-
Yan, F.1
Wang, L.2
Shi, Y.3
Cao, H.4
Liu, L.5
Washington, M.K.6
Chaturvedi, R.7
Israel, D.A.8
Cao, H.9
Wang, B.10
-
3
-
-
84868212109
-
Crohn’s disease
-
[CrossRef]
-
Baumgart, D.C.; Sandborn, W.J. Crohn’s disease. Lancet 2012, 380, 1590–1605. [CrossRef]
-
(2012)
Lancet
, vol.380
, pp. 1590-1605
-
-
Baumgart, D.C.1
Sandborn, W.J.2
-
4
-
-
84868207481
-
Ulcerative colitis
-
[CrossRef]
-
Ordas, I.; Eckmann, L.; Talamini, M.; Baumgart, D.C.; Sandborn, W.J. Ulcerative colitis. Lancet 2012, 380, 1606–1619. [CrossRef]
-
(2012)
Lancet
, vol.380
, pp. 1606-1619
-
-
Ordas, I.1
Eckmann, L.2
Talamini, M.3
Baumgart, D.C.4
Sandborn, W.J.5
-
5
-
-
38149078906
-
Uncoupling gene-diet in inflammatory bowel disease (IBD)
-
[CrossRef] [PubMed]
-
Ferguson, L.R.; Peterman, I.; Hubner, C.; Philpott, M.; Shellin, A.N. Uncoupling gene-diet in inflammatory bowel disease (IBD). Genes Nutr. 2007, 2, 71–73. [CrossRef] [PubMed]
-
(2007)
Genes Nutr
, vol.2
, pp. 71-73
-
-
Ferguson, L.R.1
Peterman, I.2
Hubner, C.3
Philpott, M.4
Shellin, A.N.5
-
6
-
-
71949112397
-
Inflammatory bowel disease, gut bacteria and probiotic therapy
-
[CrossRef] [PubMed]
-
Reiff, C.; Kelly, D. Inflammatory bowel disease, gut bacteria and probiotic therapy. Int. J. Med. Microbiol. 2010, 300, 25–33. [CrossRef] [PubMed]
-
(2010)
Int. J. Med. Microbiol
, vol.300
, pp. 25-33
-
-
Reiff, C.1
Kelly, D.2
-
7
-
-
83755219473
-
Increasing incidence and prevalence of the inflammatory bowel diseases with time, based on systematic review
-
[CrossRef] [PubMed]
-
Molodecky, N.A.; Soon, I.S.; Rabi, D.M.; Ghali, W.A.; Ferris, M.; Chernoff, G.; Benchimol, E.I.; Panaccione, R.; Ghosh, S.; Barkema, H.W.; et al. Increasing incidence and prevalence of the inflammatory bowel diseases with time, based on systematic review. Gastroenterology 2012, 142, 46–54. [CrossRef] [PubMed]
-
(2012)
Gastroenterology
, vol.142
, pp. 46-54
-
-
Molodecky, N.A.1
Soon, I.S.2
Rabi, D.M.3
Ghali, W.A.4
Ferris, M.5
Chernoff, G.6
Benchimol, E.I.7
Panaccione, R.8
Ghosh, S.9
Barkema, H.W.10
-
8
-
-
84874652518
-
Geographical variability and environmental risk factors in inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Ng, S.C.; Bernstein, C.N.; Vatn, M.H.; Lakatos, P.L.; Loftus, E.V., Jr.; Tysk, C.; O’Morain, C.; Moum, B.; Colombel, J.F. Geographical variability and environmental risk factors in inflammatory bowel disease. Gut 2013, 62, 630–649. [CrossRef] [PubMed]
-
(2013)
Gut
, vol.62
, pp. 630-649
-
-
Ng, S.C.1
Bernstein, C.N.2
Vatn, M.H.3
Lakatos, P.L.4
Loftus, E.V.5
Tysk, C.6
O’Morain, C.7
Moum, B.8
Colombel, J.F.9
-
9
-
-
79955561083
-
Epidemiology and natural history of inflammatory bowel diseases
-
[CrossRef] [PubMed]
-
Cosnes, J.; Gower-Rousseau, C.; Seksik, P.; Cortot, A. Epidemiology and natural history of inflammatory bowel diseases. Gastroenterology 2011, 140, 1785–1794. [CrossRef] [PubMed]
-
(2011)
Gastroenterology
, vol.140
, pp. 1785-1794
-
-
Cosnes, J.1
Gower-Rousseau, C.2
Seksik, P.3
Cortot, A.4
-
10
-
-
84879962392
-
Inflammatory bowel disease epidemiology
-
[CrossRef] [PubMed]
-
Burisch, J.; Munkholm, P. Inflammatory bowel disease epidemiology. Curr. Opin. Gastroenterol. 2013, 29, 357–362. [CrossRef] [PubMed]
-
(2013)
Curr. Opin. Gastroenterol
, vol.29
, pp. 357-362
-
-
Burisch, J.1
Munkholm, P.2
-
11
-
-
36549001139
-
The prevalence and geographic distribution of Crohn’s disease and ulcerative colitis in the USA
-
[CrossRef] [PubMed]
-
Kappelman, M.D.; Rifas-Shiman, S.L.; Kleinman, K.; Ollendorf, D.; Bousvaros, A.; Grand, R.J.; Finkelstein, J.A. The prevalence and geographic distribution of Crohn’s disease and ulcerative colitis in the USA. Clin. Gastroenterol. Hepatol. 2007, 5, 1424–1429. [CrossRef] [PubMed]
-
(2007)
Clin. Gastroenterol. Hepatol
, vol.5
, pp. 1424-1429
-
-
Kappelman, M.D.1
Rifas-Shiman, S.L.2
Kleinman, K.3
Ollendorf, D.4
Bousvaros, A.5
Grand, R.J.6
Finkelstein, J.A.7
-
12
-
-
62849109967
-
Epidemiology of inflammatory bowel disease among children in poland. A prospective, population-based, 2-year study, 2002–2004
-
[CrossRef] [PubMed]
-
Karolewska-Bochenek, K.; Lazowska-Przeorek, I.; Albrecht, P.; Grzybowska, K.; Ryzko, J.; Szamotulska, K.; Radzikowski, A.; Landowski, P.; Krzesiek, E.; Ignys, I.; et al. Epidemiology of inflammatory bowel disease among children in poland. A prospective, population-based, 2-year study, 2002–2004. Digestion 2009, 79, 121–129. [CrossRef] [PubMed]
-
(2009)
Digestion
, vol.79
, pp. 121-129
-
-
Karolewska-Bochenek, K.1
Lazowska-Przeorek, I.2
Albrecht, P.3
Grzybowska, K.4
Ryzko, J.5
Szamotulska, K.6
Radzikowski, A.7
Landowski, P.8
Krzesiek, E.9
Ignys, I.10
-
13
-
-
76549112006
-
Iliac bone histomorphometry in children with newly diagnosed inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Ward, L.M.; Rauch, F.; Matzinger, M.A.; Benchimol, E.I.; Boland, M.; Mack, D.R. Iliac bone histomorphometry in children with newly diagnosed inflammatory bowel disease. Osteoporos. Int. 2010, 21, 331–337. [CrossRef] [PubMed]
-
(2010)
Osteoporos. Int
, vol.21
, pp. 331-337
-
-
Ward, L.M.1
Rauch, F.2
Matzinger, M.A.3
Benchimol, E.I.4
Boland, M.5
Mack, D.R.6
-
14
-
-
58149390157
-
An update on the epidemiology of inflammatory bowel disease in Asia
-
[CrossRef] [PubMed]
-
Thia, K.T.; Loftus, E.V., Jr.; Sandborn, W.J.; Yang, S.K. An update on the epidemiology of inflammatory bowel disease in Asia. Am. J. Gastroenterol. 2008, 103, 3167–3182. [CrossRef] [PubMed]
-
(2008)
Am. J. Gastroenterol
, vol.103
, pp. 3167-3182
-
-
Thia, K.T.1
Loftus, E.V.2
Sandborn, W.J.3
Yang, S.K.4
-
15
-
-
84859059470
-
Changing Crohn’s disease management: Need for new goals and indices to prevent disability and improve quality of life
-
[CrossRef]
-
Hommes, D.; Colombel, J.F.; Emery, P.; Greco, M.; Sandborn, W.J. Changing Crohn’s disease management: Need for new goals and indices to prevent disability and improve quality of life. J. Crohns Colitis 2012, 6, S224–S234. [CrossRef]
-
(2012)
J. Crohns Colitis
, vol.6
, pp. S224-S234
-
-
Hommes, D.1
Colombel, J.F.2
Emery, P.3
Greco, M.4
Sandborn, W.J.5
-
16
-
-
74049100421
-
Quality of care in inflammatory bowel disease: A review and discussion
-
[CrossRef] [PubMed]
-
Kappelman, M.D.; Palmer, L.; Boyle, B.M.; Rubin, D.T. Quality of care in inflammatory bowel disease: A review and discussion. Inflamm. Bowel Dis. 2010, 16, 125–133. [CrossRef] [PubMed]
-
(2010)
Inflamm. Bowel Dis
, vol.16
, pp. 125-133
-
-
Kappelman, M.D.1
Palmer, L.2
Boyle, B.M.3
Rubin, D.T.4
-
17
-
-
65849141049
-
The direct and indirect cost burden of Crohn’s disease and ulcerative colitis
-
[CrossRef] [PubMed]
-
Gibson, T.B.; Ng, E.; Ozminkowski, R.J.; Wang, S.; Burton, W.N.; Goetzel, R.Z.; Maclean, R. The direct and indirect cost burden of Crohn’s disease and ulcerative colitis. J. Occup. Environ. Med. 2008, 50, 1261–1272. [CrossRef] [PubMed]
-
(2008)
J. Occup. Environ. Med
, vol.50
, pp. 1261-1272
-
-
Gibson, T.B.1
Ng, E.2
Ozminkowski, R.J.3
Wang, S.4
Burton, W.N.5
Goetzel, R.Z.6
Maclean, R.7
-
18
-
-
84925810668
-
Role of genetics in pediatric inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Okou, D.T.; Kugathasan, S. Role of genetics in pediatric inflammatory bowel disease. Inflamm. Bowel Dis. 2014, 20, 1878–1884. [CrossRef] [PubMed]
-
(2014)
Inflamm. Bowel Dis
, vol.20
, pp. 1878-1884
-
-
Okou, D.T.1
Kugathasan, S.2
-
19
-
-
78649489009
-
Genome-wide meta-analysis increases to 71 the number of confirmed Crohn’s disease susceptibility loci
-
[CrossRef] [PubMed]
-
Franke, A.; McGovern, D.P.; Barrett, J.C.; Wang, K.; Radford-Smith, G.L.; Ahmad, T.; Lees, C.W.; Balschun, T.; Lee, J.; Roberts, R.; et al. Genome-wide meta-analysis increases to 71 the number of confirmed Crohn’s disease susceptibility loci. Nat. Genet. 2010, 42, 1118–1125. [CrossRef] [PubMed]
-
(2010)
Nat. Genet
, vol.42
, pp. 1118-1125
-
-
Franke, A.1
McGovern, D.P.2
Barrett, J.C.3
Wang, K.4
Radford-Smith, G.L.5
Ahmad, T.6
Lees, C.W.7
Balschun, T.8
Lee, J.9
Roberts, R.10
-
20
-
-
84872089246
-
Genes and ”in-vironment”: How will our concepts on the pathophysiology of inflammatory bowel disease develop in the future?
-
[CrossRef] [PubMed]
-
Fiocchi, C. Genes and ”in-vironment”: How will our concepts on the pathophysiology of inflammatory bowel disease develop in the future? Dig. Dis. 2012, 30, 2–11. [CrossRef] [PubMed]
-
(2012)
Dig. Dis
, vol.30
, pp. 2-11
-
-
Fiocchi, C.1
-
21
-
-
79955554300
-
The commensal microbiota and enteropathogens in the pathogenesis of inflammatory bowel diseases
-
[CrossRef] [PubMed]
-
Chassaing, B.; Darfeuille-Michaud, A. The commensal microbiota and enteropathogens in the pathogenesis of inflammatory bowel diseases. Gastroenterology 2011, 140, 1720–1728. [CrossRef] [PubMed]
-
(2011)
Gastroenterology
, vol.140
, pp. 1720-1728
-
-
Chassaing, B.1
Darfeuille-Michaud, A.2
-
22
-
-
84894269592
-
New cytokine targets in inflammatory bowel disease
-
Macdonald, T.T. New cytokine targets in inflammatory bowel disease. Gastroenterol Hepatol 2011, 7, 474–476.
-
(2011)
Gastroenterol Hepatol
, vol.7
, pp. 474-476
-
-
Macdonald, T.T.1
-
23
-
-
34047139587
-
Inflammatory bowel disease genetics: Nod2
-
[CrossRef] [PubMed]
-
Cho, J.H.; Abraham, C. Inflammatory bowel disease genetics: Nod2. Annu. Rev. Med. 2007, 58, 401–416. [CrossRef] [PubMed]
-
(2007)
Annu. Rev. Med
, vol.58
, pp. 401-416
-
-
Cho, J.H.1
Abraham, C.2
-
24
-
-
0033773642
-
Concordance of inflammatory bowel disease among Danish twins. Results of a nationwide study
-
[PubMed]
-
Orholm, M.; Binder, V.; Sorensen, T.I.; Rasmussen, L.P.; Kyvik, K.O. Concordance of inflammatory bowel disease among Danish twins. Results of a nationwide study. Scand. J. Gastroenterol. 2000, 35, 1075–1081. [PubMed]
-
(2000)
Scand. J. Gastroenterol
, vol.35
, pp. 1075-1081
-
-
Orholm, M.1
Binder, V.2
Sorensen, T.I.3
Rasmussen, L.P.4
Kyvik, K.O.5
-
25
-
-
33745473236
-
Family and twin studies in inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Halme, L.; Paavola-Sakki, P.; Turunen, U.; Lappalainen, M.; Farkkila, M.; Kontula, K. Family and twin studies in inflammatory bowel disease. World J. Gastroenterol. 2006, 12, 3668–3672. [CrossRef] [PubMed]
-
(2006)
World J. Gastroenterol
, vol.12
, pp. 3668-3672
-
-
Halme, L.1
Paavola-Sakki, P.2
Turunen, U.3
Lappalainen, M.4
Farkkila, M.5
Kontula, K.6
-
26
-
-
0023713859
-
Ulcerative colitis and Crohn’s disease in an unselected population of monozygotic and dizygotic twins. A study of heritability and the influence of smoking
-
[CrossRef] [PubMed]
-
Tysk, C.; Lindberg, E.; Jarnerot, G.; Floderus-Myrhed, B. Ulcerative colitis and Crohn’s disease in an unselected population of monozygotic and dizygotic twins. A study of heritability and the influence of smoking. Gut 1988, 29, 990–996. [CrossRef] [PubMed]
-
(1988)
Gut
, vol.29
, pp. 990-996
-
-
Tysk, C.1
Lindberg, E.2
Jarnerot, G.3
Floderus-Myrhed, B.4
-
27
-
-
0027205545
-
Ulcerative colitis: A genetically heterogeneous disorder defined by genetic (HLA class II) and subclinical (antineutrophil cytoplasmic antibodies) markers
-
[CrossRef] [PubMed]
-
Yang, H.; Rotter, J.I.; Toyoda, H.; Landers, C.; Tyran, D.; McElree, C.K.; Targan, S.R. Ulcerative colitis: A genetically heterogeneous disorder defined by genetic (HLA class II) and subclinical (antineutrophil cytoplasmic antibodies) markers. J. Clin. Invest. 1993, 92, 1080–1084. [CrossRef] [PubMed]
-
(1993)
J. Clin. Invest
, vol.92
, pp. 1080-1084
-
-
Yang, H.1
Rotter, J.I.2
Toyoda, H.3
Landers, C.4
Tyran, D.5
McElree, C.K.6
Targan, S.R.7
-
28
-
-
48349136889
-
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn’s disease
-
[CrossRef] [PubMed]
-
Barrett, J.C.; Hansoul, S.; Nicolae, D.L.; Cho, J.H.; Duerr, R.H.; Rioux, J.D.; Brant, S.R.; Silverberg, M.S.; Taylor, K.D.; Barmada, M.M.; et al. Genome-wide association defines more than 30 distinct susceptibility loci for Crohn’s disease. Nat. Genet. 2008, 40, 955–962. [CrossRef] [PubMed]
-
(2008)
Nat. Genet
, vol.40
, pp. 955-962
-
-
Barrett, J.C.1
Hansoul, S.2
Nicolae, D.L.3
Cho, J.H.4
Duerr, R.H.5
Rioux, J.D.6
Brant, S.R.7
Silverberg, M.S.8
Taylor, K.D.9
Barmada, M.M.10
-
29
-
-
79952195585
-
Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47
-
[CrossRef] [PubMed]
-
Anderson, C.A.; Boucher, G.; Lees, C.W.; Franke, A.; D’Amato, M.; Taylor, K.D.; Lee, J.C.; Goyette, P.; Imielinski, M.; Latiano, A.; et al. Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. Nat. Genet. 2011, 43, 246–252. [CrossRef] [PubMed]
-
(2011)
Nat. Genet
, vol.43
, pp. 246-252
-
-
Anderson, C.A.1
Boucher, G.2
Lees, C.W.3
Franke, A.4
D’Amato, M.5
Taylor, K.D.6
Lee, J.C.7
Goyette, P.8
Imielinski, M.9
Latiano, A.10
-
30
-
-
84919443322
-
The genetics of Crohn’s disease and ulcerative colitis —Status quo and beyond
-
[CrossRef] [PubMed]
-
Ellinghaus, D.; Bethune, J.; Petersen, B.S.; Franke, A. The genetics of Crohn’s disease and ulcerative colitis —Status quo and beyond. Scand. J. Gastroenterol. 2015, 50, 13–23. [CrossRef] [PubMed]
-
(2015)
Scand. J. Gastroenterol
, vol.50
, pp. 13-23
-
-
Ellinghaus, D.1
Bethune, J.2
Petersen, B.S.3
Franke, A.4
-
31
-
-
84868336049
-
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Jostins, L.; Ripke, S.; Weersma, R.K.; Duerr, R.H.; McGovern, D.P.; Hui, K.Y.; Lee, J.C.; Schumm, L.P.; Sharma, Y.; Anderson, C.A.; et al. Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. Nature 2012, 491, 119–124. [CrossRef] [PubMed]
-
(2012)
Nature
, vol.491
, pp. 119-124
-
-
Jostins, L.1
Ripke, S.2
Weersma, R.K.3
Duerr, R.H.4
McGovern, D.P.5
Hui, K.Y.6
Lee, J.C.7
Schumm, L.P.8
Sharma, Y.9
Anderson, C.A.10
-
32
-
-
79956112936
-
The changing epidemiology of paediatric inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Henderson, P.; Russell, R.K.; Satsangi, J.; Wilson, D.C. The changing epidemiology of paediatric inflammatory bowel disease. Aliment. Pharmacol. Ther. 2011, 33, 1380–1381. [CrossRef] [PubMed]
-
(2011)
Aliment. Pharmacol. Ther
, vol.33
, pp. 1380-1381
-
-
Henderson, P.1
Russell, R.K.2
Satsangi, J.3
Wilson, D.C.4
-
33
-
-
78650430453
-
Crohn disease: A current perspective on genetics, autophagy and immunity
-
[CrossRef] [PubMed]
-
Stappenbeck, T.S.; Rioux, J.D.; Mizoguchi, A.; Saitoh, T.; Huett, A.; Darfeuille-Michaud, A.; Wileman, T.; Mizushima, N.; Carding, S.; Akira, S.; et al. Crohn disease: A current perspective on genetics, autophagy and immunity. Autophagy 2011, 7, 355–374. [CrossRef] [PubMed]
-
(2011)
Autophagy
, vol.7
, pp. 355-374
-
-
Stappenbeck, T.S.1
Rioux, J.D.2
Mizoguchi, A.3
Saitoh, T.4
Huett, A.5
Darfeuille-Michaud, A.6
Wileman, T.7
Mizushima, N.8
Carding, S.9
Akira, S.10
-
34
-
-
33745416072
-
Disease outcome of inflammatory bowel disease patients: General outline of a Europe-wide population-based 10-year clinical follow-up study
-
[CrossRef] [PubMed]
-
Wolters, F.L.; Russel, M.G.; Sijbrandij, J.; Schouten, L.J.; Odes, S.; Riis, L.; Munkholm, P.; Langholz, E.; Bodini, P.; O’Morain, C.; et al. Disease outcome of inflammatory bowel disease patients: General outline of a Europe-wide population-based 10-year clinical follow-up study. Scand. J. Gastroenterol. 2006. [CrossRef] [PubMed]
-
(2006)
Scand. J. Gastroenterol
-
-
Wolters, F.L.1
Russel, M.G.2
Sijbrandij, J.3
Schouten, L.J.4
Odes, S.5
Riis, L.6
Munkholm, P.7
Langholz, E.8
Bodini, P.9
O’Morain, C.10
-
35
-
-
34548134044
-
Imbalances in dietary consumption of fatty acids, vegetables, and fruits are associated with risk for Crohn’s disease in children
-
[CrossRef] [PubMed]
-
Amre, D.K.; D’Souza, S.; Morgan, K.; Seidman, G.; Lambrette, P.; Grimard, G.; Israel, D.; Mack, D.; Ghadirian, P.; Deslandres, C.; et al. Imbalances in dietary consumption of fatty acids, vegetables, and fruits are associated with risk for Crohn’s disease in children. Am. J. Gastroenterol. 2007, 102, 2016–2025. [CrossRef] [PubMed]
-
(2007)
Am. J. Gastroenterol
, vol.102
, pp. 2016-2025
-
-
Amre, D.K.1
D’Souza, S.2
Morgan, K.3
Seidman, G.4
Lambrette, P.5
Grimard, G.6
Israel, D.7
Mack, D.8
Ghadirian, P.9
Deslandres, C.10
-
36
-
-
0023266579
-
Nonsteroidal anti-inflammatory drugs activate quiescent inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Kaufmann, H.J.; Taubin, H.L. Nonsteroidal anti-inflammatory drugs activate quiescent inflammatory bowel disease. Ann. Intern. Med. 1987, 107, 513–516. [CrossRef] [PubMed]
-
(1987)
Ann. Intern. Med
, vol.107
, pp. 513-516
-
-
Kaufmann, H.J.1
Taubin, H.L.2
-
37
-
-
0021637980
-
The impact of combat on later alcohol use by Vietnam veterans
-
[CrossRef] [PubMed]
-
Helzer, J.E. The impact of combat on later alcohol use by Vietnam veterans. J. Psychoactive Drugs 1984, 16, 183–191. [CrossRef] [PubMed]
-
(1984)
J. Psychoactive Drugs
, vol.16
, pp. 183-191
-
-
Helzer, J.E.1
-
38
-
-
84884273778
-
Advances in inflammatory bowel disease pathogenesis: Linking host genetics and the microbiome
-
[CrossRef] [PubMed]
-
Knights, D.; Lassen, K.G.; Xavier, R.J. Advances in inflammatory bowel disease pathogenesis: Linking host genetics and the microbiome. Gut 2013, 62, 1505–1510. [CrossRef] [PubMed]
-
(2013)
Gut
, vol.62
, pp. 1505-1510
-
-
Knights, D.1
Lassen, K.G.2
Xavier, R.J.3
-
39
-
-
84905389962
-
Intestinal microbiota in pathophysiology and management of irritable bowel syndrome
-
[CrossRef] [PubMed]
-
Lee, K.N.; Lee, O.Y. Intestinal microbiota in pathophysiology and management of irritable bowel syndrome. World J. Gastroenterol. 2014, 20, 8886–8897. [CrossRef] [PubMed]
-
(2014)
World J. Gastroenterol
, vol.20
, pp. 8886-8897
-
-
Lee, K.N.1
Lee, O.Y.2
-
40
-
-
0036202892
-
Systematic review of the comorbidity of irritable bowel syndrome with other disorders: What are the causes and implications?
-
[CrossRef] [PubMed]
-
Whitehead, W.E.; Palsson, O.; Jones, K.R. Systematic review of the comorbidity of irritable bowel syndrome with other disorders: What are the causes and implications? Gastroenterology 2002, 122, 1140–1156. [CrossRef] [PubMed]
-
(2002)
Gastroenterology
, vol.122
, pp. 1140-1156
-
-
Whitehead, W.E.1
Palsson, O.2
Jones, K.R.3
-
41
-
-
0017341656
-
Microbial ecology of the gastrointestinal tract
-
[CrossRef] [PubMed]
-
Savage, D.C. Microbial ecology of the gastrointestinal tract. Annu. Rev. Microbiol. 1977, 31, 107–133. [CrossRef] [PubMed]
-
(1977)
Annu. Rev. Microbiol
, vol.31
, pp. 107-133
-
-
Savage, D.C.1
-
42
-
-
84974635271
-
Revised estimates for the number of human and bacteria cells in the body
-
[CrossRef]
-
Sender, R.; Fuchs, S.; Milo, R. Revised estimates for the number of human and bacteria cells in the body. bioRxiv 2016. [CrossRef]
-
(2016)
bioRxiv
-
-
Sender, R.1
Fuchs, S.2
Milo, R.3
-
43
-
-
0030297089
-
The indigenous gastrointestinal microflora
-
[CrossRef]
-
Berg, R.D. The indigenous gastrointestinal microflora. Trends Microbiol. 1996, 4, 430–435. [CrossRef]
-
(1996)
Trends Microbiol
, vol.4
, pp. 430-435
-
-
Berg, R.D.1
-
44
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
[CrossRef] [PubMed]
-
Ley, R.E.; Peterson, D.A.; Gordon, J.I. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 2006, 124, 837–848. [CrossRef] [PubMed]
-
(2006)
Cell
, vol.124
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
45
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
[CrossRef] [PubMed]
-
Qin, J.; Li, R.; Raes, J.; Arumugam, M.; Burgdorf, K.S.; Manichanh, C.; Nielsen, T.; Pons, N.; Levenez, F.; Yamada, T.; et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 2010, 464, 59–65. [CrossRef] [PubMed]
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
Nielsen, T.7
Pons, N.8
Levenez, F.9
Yamada, T.10
-
46
-
-
33846138032
-
The role of microbes in Crohn’s disease
-
[CrossRef] [PubMed]
-
Eckburg, P.B.; Relman, D.A. The role of microbes in Crohn’s disease. Clin. Infect. Dis. 2007, 44, 256–262. [CrossRef] [PubMed]
-
(2007)
Clin. Infect. Dis
, vol.44
, pp. 256-262
-
-
Eckburg, P.B.1
Relman, D.A.2
-
47
-
-
84871814687
-
Symptomatic atherosclerosis is associated with an altered gut metagenome
-
[CrossRef] [PubMed]
-
Karlsson, F.H.; Fak, F.; Nookaew, I.; Tremaroli, V.; Fagerberg, B.; Petranovic, D.; Backhed, F.; Nielsen, J. Symptomatic atherosclerosis is associated with an altered gut metagenome. Nat. Commun. 2012. [CrossRef] [PubMed]
-
(2012)
Nat. Commun
-
-
Karlsson, F.H.1
Fak, F.2
Nookaew, I.3
Tremaroli, V.4
Fagerberg, B.5
Petranovic, D.6
Backhed, F.7
Nielsen, J.8
-
48
-
-
85027927719
-
Enterotypes of the human gut microbiome
-
[CrossRef] [PubMed]
-
Arumugam, M.; Raes, J.; Pelletier, E.; Le Paslier, D.; Yamada, T.; Mende, D.R.; Fernandes, G.R.; Tap, J.; Bruls, T.; Batto, J.M.; et al. Enterotypes of the human gut microbiome. Nature 2011, 473, 174–180. [CrossRef] [PubMed]
-
(2011)
Nature
, vol.473
, pp. 174-180
-
-
Arumugam, M.1
Raes, J.2
Pelletier, E.3
Le Paslier, D.4
Yamada, T.5
Mende, D.R.6
Fernandes, G.R.7
Tap, J.8
Bruls, T.9
Batto, J.M.10
-
49
-
-
84864756231
-
The human microbiome: Ecosystem resilience and health
-
[CrossRef] [PubMed]
-
Relman, D.A. The human microbiome: Ecosystem resilience and health. Nutr. Rev. 2012, 70, S2–S9. [CrossRef] [PubMed]
-
(2012)
Nutr. Rev
, vol.70
, pp. S2-S9
-
-
Relman, D.A.1
-
50
-
-
84865515484
-
Microbiology: Antibiotics and adiposity
-
[CrossRef] [PubMed]
-
Flint, H.J. Microbiology: Antibiotics and adiposity. Nature 2012, 488, 601–602. [CrossRef] [PubMed]
-
(2012)
Nature
, vol.488
, pp. 601-602
-
-
Flint, H.J.1
-
51
-
-
78650973052
-
High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Walker, A.W.; Sanderson, J.D.; Churcher, C.; Parkes, G.C.; Hudspith, B.N.; Rayment, N.; Brostoff, J.; Parkhill, J.; Dougan, G.; Petrovska, L. High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease. BMC Microbiol. 2011. [CrossRef] [PubMed]
-
(2011)
BMC Microbiol
-
-
Walker, A.W.1
Sanderson, J.D.2
Churcher, C.3
Parkes, G.C.4
Hudspith, B.N.5
Rayment, N.6
Brostoff, J.7
Parkhill, J.8
Dougan, G.9
Petrovska, L.10
-
52
-
-
33847233644
-
Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrate-producing bacteria in feces
-
[CrossRef] [PubMed]
-
Duncan, S.H.; Belenguer, A.; Holtrop, G.; Johnstone, A.M.; Flint, H.J.; Lobley, G.E. Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrate-producing bacteria in feces. Appl. Environ. Microbiol. 2007, 73, 1073–1078. [CrossRef] [PubMed]
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 1073-1078
-
-
Duncan, S.H.1
Belenguer, A.2
Holtrop, G.3
Johnstone, A.M.4
Flint, H.J.5
Lobley, G.E.6
-
53
-
-
79955383693
-
High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health
-
[CrossRef] [PubMed]
-
Russell, W.R.; Gratz, S.W.; Duncan, S.H.; Holtrop, G.; Ince, J.; Scobbie, L.; Duncan, G.; Johnstone, A.M.; Lobley, G.E.; Wallace, R.J.; et al. High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health. Am. J. Clin. Nutr. 2011, 93, 1062–1072. [CrossRef] [PubMed]
-
(2011)
Am. J. Clin. Nutr
, vol.93
, pp. 1062-1072
-
-
Russell, W.R.1
Gratz, S.W.2
Duncan, S.H.3
Holtrop, G.4
Ince, J.5
Scobbie, L.6
Duncan, G.7
Johnstone, A.M.8
Lobley, G.E.9
Wallace, R.J.10
-
54
-
-
84903587601
-
Chemoprevention in gastrointestinal physiology and disease. Natural products and microbiome
-
[CrossRef] [PubMed]
-
Greiner, A.K.; Papineni, R.V.; Umar, S. Chemoprevention in gastrointestinal physiology and disease. Natural products and microbiome. Am. J. Physiol. Gastrointest. Liver Physiol. 2014, 307, G1–G15. [CrossRef] [PubMed]
-
(2014)
Am. J. Physiol. Gastrointest. Liver Physiol
, vol.307
, pp. G1-G15
-
-
Greiner, A.K.1
Papineni, R.V.2
Umar, S.3
-
55
-
-
40849126449
-
Host-bacterial coevolution and the search for new drug targets
-
[CrossRef] [PubMed]
-
Zaneveld, J.; Turnbaugh, P.J.; Lozupone, C.; Ley, R.E.; Hamady, M.; Gordon, J.I.; Knight, R. Host-bacterial coevolution and the search for new drug targets. Curr. Opin. Chem. Biol. 2008, 12, 109–114. [CrossRef] [PubMed]
-
(2008)
Curr. Opin. Chem. Biol
, vol.12
, pp. 109-114
-
-
Zaneveld, J.1
Turnbaugh, P.J.2
Lozupone, C.3
Ley, R.E.4
Hamady, M.5
Gordon, J.I.6
Knight, R.7
-
56
-
-
59149103242
-
Butyrate modulates oxidative stress in the colonic mucosa of healthy humans
-
[CrossRef] [PubMed]
-
Hamer, H.M.; Jonkers, D.M.; Bast, A.; Vanhoutvin, S.A.; Fischer, M.A.; Kodde, A.; Troost, F.J.; Venema, K.; Brummer, R.J. Butyrate modulates oxidative stress in the colonic mucosa of healthy humans. Clin. Nutr. 2009, 28, 88–93. [CrossRef] [PubMed]
-
(2009)
Clin. Nutr
, vol.28
, pp. 88-93
-
-
Hamer, H.M.1
Jonkers, D.M.2
Bast, A.3
Vanhoutvin, S.A.4
Fischer, M.A.5
Kodde, A.6
Troost, F.J.7
Venema, K.8
Brummer, R.J.9
-
57
-
-
1542316379
-
Bacterial contributions to mammalian gut development
-
[CrossRef] [PubMed]
-
Hooper, L.V. Bacterial contributions to mammalian gut development. Trends Microbiol. 2004, 12, 129–134. [CrossRef] [PubMed]
-
(2004)
Trends Microbiol
, vol.12
, pp. 129-134
-
-
Hooper, L.V.1
-
58
-
-
0035843993
-
Commensal host-bacterial relationships in the gut
-
[CrossRef] [PubMed]
-
Hooper, L.V.; Gordon, J.I. Commensal host-bacterial relationships in the gut. Science 2001, 292, 1115–1118. [CrossRef] [PubMed]
-
(2001)
Science
, vol.292
, pp. 1115-1118
-
-
Hooper, L.V.1
Gordon, J.I.2
-
59
-
-
84880139283
-
The gut microflora and its variety of roles in health and disease
-
[PubMed]
-
Frick, J.S.; Autenrieth, I.B. The gut microflora and its variety of roles in health and disease. Curr. Top. Microbiol. Immunol. 2013, 358, 273–289. [PubMed]
-
(2013)
Curr. Top. Microbiol. Immunol
, vol.358
, pp. 273-289
-
-
Frick, J.S.1
Autenrieth, I.B.2
-
60
-
-
84861992014
-
The application of ecological theory toward an understanding of the human microbiome
-
[CrossRef] [PubMed]
-
Costello, E.K.; Stagaman, K.; Dethlefsen, L.; Bohannan, B.J.; Relman, D.A. The application of ecological theory toward an understanding of the human microbiome. Science 2012, 336, 1255–1262. [CrossRef] [PubMed]
-
(2012)
Science
, vol.336
, pp. 1255-1262
-
-
Costello, E.K.1
Stagaman, K.2
Dethlefsen, L.3
Bohannan, B.J.4
Relman, D.A.5
-
61
-
-
84862141704
-
Human gut microbiome viewed across age and geography
-
[CrossRef] [PubMed]
-
Yatsunenko, T.; Rey, F.E.; Manary, M.J.; Trehan, I.; Dominguez-Bello, M.G.; Contreras, M.; Magris, M.; Hidalgo, G.; Baldassano, R.N.; Anokhin, A.P.; et al. Human gut microbiome viewed across age and geography. Nature 2012, 486, 222–227. [CrossRef] [PubMed]
-
(2012)
Nature
, vol.486
, pp. 222-227
-
-
Yatsunenko, T.1
Rey, F.E.2
Manary, M.J.3
Trehan, I.4
Dominguez-Bello, M.G.5
Contreras, M.6
Magris, M.7
Hidalgo, G.8
Baldassano, R.N.9
Anokhin, A.P.10
-
62
-
-
84861708688
-
Metagenomics of human microbiome: Beyond 16s rDNA
-
[CrossRef] [PubMed]
-
Gosalbes, M.J.; Abellan, J.J.; Durban, A.; Perez-Cobas, A.E.; Latorre, A.; Moya, A. Metagenomics of human microbiome: Beyond 16s rDNA. Clin. Microbiol. Infect. 2012, 18, 47–49. [CrossRef] [PubMed]
-
(2012)
Clin. Microbiol. Infect
, vol.18
, pp. 47-49
-
-
Gosalbes, M.J.1
Abellan, J.J.2
Durban, A.3
Perez-Cobas, A.E.4
Latorre, A.5
Moya, A.6
-
63
-
-
84871454511
-
Gut microbiota composition and activity in relation to host metabolic phenotype and disease risk
-
[CrossRef] [PubMed]
-
Holmes, E.; Li, J.V.; Marchesi, J.R.; Nicholson, J.K. Gut microbiota composition and activity in relation to host metabolic phenotype and disease risk. Cell Metab. 2012, 16, 559–564. [CrossRef] [PubMed]
-
(2012)
Cell Metab
, vol.16
, pp. 559-564
-
-
Holmes, E.1
Li, J.V.2
Marchesi, J.R.3
Nicholson, J.K.4
-
64
-
-
84899128493
-
Microbiota biodiversity in inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Comito, D.; Cascio, A.; Romano, C. Microbiota biodiversity in inflammatory bowel disease. Ital. J. Pediatr. 2014. [CrossRef] [PubMed]
-
(2014)
Ital. J. Pediatr
-
-
Comito, D.1
Cascio, A.2
Romano, C.3
-
65
-
-
0038337828
-
Targeting enteric bacteria in treatment of inflammatory bowel diseases: Why, how, and when
-
[CrossRef] [PubMed]
-
Sartor, R.B. Targeting enteric bacteria in treatment of inflammatory bowel diseases: Why, how, and when. Curr. Opin. Gastroenterol. 2003, 19, 358–365. [CrossRef] [PubMed]
-
(2003)
Curr. Opin. Gastroenterol
, vol.19
, pp. 358-365
-
-
Sartor, R.B.1
-
66
-
-
0028003794
-
The germfree state prevents development of gut and joint inflammatory disease in hla-b27 transgenic rats
-
[CrossRef] [PubMed]
-
Taurog, J.D.; Richardson, J.A.; Croft, J.T.; Simmons, W.A.; Zhou, M.; Fernandez-Sueiro, J.L.; Balish, E.; Hammer, R.E. The germfree state prevents development of gut and joint inflammatory disease in hla-b27 transgenic rats. J. Exp. Med. 1994, 180, 2359–2364. [CrossRef] [PubMed]
-
(1994)
J. Exp. Med
, vol.180
, pp. 2359-2364
-
-
Taurog, J.D.1
Richardson, J.A.2
Croft, J.T.3
Simmons, W.A.4
Zhou, M.5
Fernandez-Sueiro, J.L.6
Balish, E.7
Hammer, R.E.8
-
67
-
-
3342988481
-
Inflammatory bowel disease: The role of environmental factors
-
[CrossRef] [PubMed]
-
Danese, S.; Sans, M.; Fiocchi, C. Inflammatory bowel disease: The role of environmental factors. Autoimmun. Rev. 2004, 3, 394–400. [CrossRef] [PubMed]
-
(2004)
Autoimmun. Rev
, vol.3
, pp. 394-400
-
-
Danese, S.1
Sans, M.2
Fiocchi, C.3
-
68
-
-
84888265991
-
The tuning of the gut nervous system by commensal microbiota
-
[CrossRef] [PubMed]
-
Kamada, N.; Kao, J.Y. The tuning of the gut nervous system by commensal microbiota. Gastroenterology 2013, 145, 1193–1196. [CrossRef] [PubMed]
-
(2013)
Gastroenterology
, vol.145
, pp. 1193-1196
-
-
Kamada, N.1
Kao, J.Y.2
-
69
-
-
84864336737
-
Probiotic bacteria regulate intestinal epithelial permeability in experimental ileitis by a TNF-dependent mechanism
-
[CrossRef] [PubMed]
-
Corridoni, D.; Pastorelli, L.; Mattioli, B.; Locovei, S.; Ishikawa, D.; Arseneau, K.O.; Chieppa, M.; Cominelli, F.; Pizarro, T.T. Probiotic bacteria regulate intestinal epithelial permeability in experimental ileitis by a TNF-dependent mechanism. PLoS ONE 2012, 7, e42067. [CrossRef] [PubMed]
-
(2012)
PLoS ONE
, vol.7
, pp. e42067
-
-
Corridoni, D.1
Pastorelli, L.2
Mattioli, B.3
Locovei, S.4
Ishikawa, D.5
Arseneau, K.O.6
Chieppa, M.7
Cominelli, F.8
Pizarro, T.T.9
-
70
-
-
0142156581
-
Standard treatment of ulcerative colitis
-
[CrossRef] [PubMed]
-
Gionchetti, P.; Rizzello, F.; Habal, F.; Morselli, C.; Amadini, C.; Romagnoli, R.; Campieri, M. Standard treatment of ulcerative colitis. Dig. Dis. 2003, 21, 157–167. [CrossRef] [PubMed]
-
(2003)
Dig. Dis
, vol.21
, pp. 157-167
-
-
Gionchetti, P.1
Rizzello, F.2
Habal, F.3
Morselli, C.4
Amadini, C.5
Romagnoli, R.6
Campieri, M.7
-
71
-
-
77950460778
-
The role of infection in the aetiology of inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Hansen, R.; Thomson, J.M.; El-Omar, E.M.; Hold, G.L. The role of infection in the aetiology of inflammatory bowel disease. J. Gastroenterol. 2010, 45, 266–276. [CrossRef] [PubMed]
-
(2010)
J. Gastroenterol
, vol.45
, pp. 266-276
-
-
Hansen, R.1
Thomson, J.M.2
El-Omar, E.M.3
Hold, G.L.4
-
72
-
-
35348857386
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
-
[CrossRef] [PubMed]
-
Frank, D.N.; St Amand, A.L.; Feldman, R.A.; Boedeker, E.C.; Harpaz, N.; Pace, N.R. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc. Natl. Acad. Sci. USA 2007, 104, 13780–13785. [CrossRef] [PubMed]
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 13780-13785
-
-
Frank, D.N.1
St Amand, A.L.2
Feldman, R.A.3
Boedeker, E.C.4
Harpaz, N.5
Pace, N.R.6
-
73
-
-
33748792311
-
Temperature gradient gel electrophoresis of fecal 16s rRNA reveals active Escherichia coli in the microbiota of patients with ulcerative colitis
-
[CrossRef] [PubMed]
-
Sokol, H.; Lepage, P.; Seksik, P.; Dore, J.; Marteau, P. Temperature gradient gel electrophoresis of fecal 16s rRNA reveals active Escherichia coli in the microbiota of patients with ulcerative colitis. J. Clin. Microbiol. 2006, 44, 3172–3177. [CrossRef] [PubMed]
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 3172-3177
-
-
Sokol, H.1
Lepage, P.2
Seksik, P.3
Dore, J.4
Marteau, P.5
-
74
-
-
44649118583
-
Metagenomic approaches for defining the pathogenesis of inflammatory bowel diseases
-
[CrossRef] [PubMed]
-
Peterson, D.A.; Frank, D.N.; Pace, N.R.; Gordon, J.I. Metagenomic approaches for defining the pathogenesis of inflammatory bowel diseases. Cell Host Microbe 2008, 3, 417–427. [CrossRef] [PubMed]
-
(2008)
Cell Host Microbe
, vol.3
, pp. 417-427
-
-
Peterson, D.A.1
Frank, D.N.2
Pace, N.R.3
Gordon, J.I.4
-
75
-
-
78650155416
-
Highlighting new phylogenetic specificities of Crohn’s disease microbiota
-
[CrossRef] [PubMed]
-
Mondot, S.; Kang, S.; Furet, J.P.; Aguirre de Carcer, D.; McSweeney, C.; Morrison, M.; Marteau, P.; Dore, J.; Leclerc, M. Highlighting new phylogenetic specificities of Crohn’s disease microbiota. Inflamm. Bowel Dis. 2011, 17, 185–192. [CrossRef] [PubMed]
-
(2011)
Inflamm. Bowel Dis
, vol.17
, pp. 185-192
-
-
Mondot, S.1
Kang, S.2
Furet, J.P.3
Aguirre de Carcer, D.4
McSweeney, C.5
Morrison, M.6
Marteau, P.7
Dore, J.8
Leclerc, M.9
-
76
-
-
79953748870
-
Dysbiosis of the faecal microbiota in patients with Crohn’s disease and their unaffected relatives
-
[CrossRef] [PubMed]
-
Joossens, M.; Huys, G.; Cnockaert, M.; de Preter, V.; Verbeke, K.; Rutgeerts, P.; Vandamme, P.; Vermeire, S. Dysbiosis of the faecal microbiota in patients with Crohn’s disease and their unaffected relatives. Gut 2011, 60, 631–637. [CrossRef] [PubMed]
-
(2011)
Gut
, vol.60
, pp. 631-637
-
-
Joossens, M.1
Huys, G.2
Cnockaert, M.3
de Preter, V.4
Verbeke, K.5
Rutgeerts, P.6
Vandamme, P.7
Vermeire, S.8
-
77
-
-
0034049289
-
Bacteroides fragilis enterotoxin gene sequences in patients with inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Prindiville, T.P.; Sheikh, R.A.; Cohen, S.H.; Tang, Y.J.; Cantrell, M.C.; Silva, J., Jr. Bacteroides fragilis enterotoxin gene sequences in patients with inflammatory bowel disease. Emerg. Infect. Dis. 2000, 6, 171–174. [CrossRef] [PubMed]
-
(2000)
Emerg. Infect. Dis
, vol.6
, pp. 171-174
-
-
Prindiville, T.P.1
Sheikh, R.A.2
Cohen, S.H.3
Tang, Y.J.4
Cantrell, M.C.5
Silva, J.6
-
78
-
-
0036117798
-
Changes in the bacterial flora of the neoterminal ileum after ileocolonic resection for Crohn’s disease
-
[CrossRef] [PubMed]
-
Neut, C.; Bulois, P.; Desreumaux, P.; Membre, J.M.; Lederman, E.; Gambiez, L.; Cortot, A.; Quandalle, P.; van Kruiningen, H.; Colombel, J.F. Changes in the bacterial flora of the neoterminal ileum after ileocolonic resection for Crohn’s disease. Am. J. Gastroenterol. 2002, 97, 939–946. [CrossRef] [PubMed]
-
(2002)
Am. J. Gastroenterol
, vol.97
, pp. 939-946
-
-
Neut, C.1
Bulois, P.2
Desreumaux, P.3
Membre, J.M.4
Lederman, E.5
Gambiez, L.6
Cortot, A.7
Quandalle, P.8
van Kruiningen, H.9
Colombel, J.F.10
-
79
-
-
84875717908
-
Multicenter analysis of fecal microbiota profiles in Japanese patients with Crohn’s disease
-
[CrossRef] [PubMed]
-
Andoh, A.; Kuzuoka, H.; Tsujikawa, T.; Nakamura, S.; Hirai, F.; Suzuki, Y.; Matsui, T.; Fujiyama, Y.; Matsumoto, T. Multicenter analysis of fecal microbiota profiles in Japanese patients with Crohn’s disease. J. Gastroenterol. 2012, 47, 1298–1307. [CrossRef] [PubMed]
-
(2012)
J. Gastroenterol
, vol.47
, pp. 1298-1307
-
-
Andoh, A.1
Kuzuoka, H.2
Tsujikawa, T.3
Nakamura, S.4
Hirai, F.5
Suzuki, Y.6
Matsui, T.7
Fujiyama, Y.8
Matsumoto, T.9
-
80
-
-
0037302961
-
Alterations of the dominant faecal bacterial groups in patients with Crohn’s disease of the colon
-
[CrossRef] [PubMed]
-
Seksik, P.; Rigottier-Gois, L.; Gramet, G.; Sutren, M.; Pochart, P.; Marteau, P.; Jian, R.; Dore, J. Alterations of the dominant faecal bacterial groups in patients with Crohn’s disease of the colon. Gut 2003, 52, 237–242. [CrossRef] [PubMed]
-
(2003)
Gut
, vol.52
, pp. 237-242
-
-
Seksik, P.1
Rigottier-Gois, L.2
Gramet, G.3
Sutren, M.4
Pochart, P.5
Marteau, P.6
Jian, R.7
Dore, J.8
-
81
-
-
33646241058
-
Prevalence of bacteroides and Prevotella spp. In ulcerative colitis
-
[CrossRef] [PubMed]
-
Lucke, K.; Miehlke, S.; Jacobs, E.; Schuppler, M. Prevalence of bacteroides and Prevotella spp. In ulcerative colitis. J. Med. Microbiol. 2006, 55, 617–624. [CrossRef] [PubMed]
-
(2006)
J. Med. Microbiol
, vol.55
, pp. 617-624
-
-
Lucke, K.1
Miehlke, S.2
Jacobs, E.3
Schuppler, M.4
-
82
-
-
84859443151
-
IBD-what role do proteobacteria play?
-
[CrossRef] [PubMed]
-
Mukhopadhya, I.; Hansen, R.; El-Omar, E.M.; Hold, G.L. IBD-what role do proteobacteria play? Nat. Rev. Gastroenterol. Hepatol. 2012, 9, 219–230. [CrossRef] [PubMed]
-
(2012)
Nat. Rev. Gastroenterol. Hepatol
, vol.9
, pp. 219-230
-
-
Mukhopadhya, I.1
Hansen, R.2
El-Omar, E.M.3
Hold, G.L.4
-
83
-
-
77956515952
-
Transcriptional activity of the dominant gut mucosal microbiota in chronic inflammatory bowel disease patients
-
[CrossRef] [PubMed]
-
Rehman, A.; Lepage, P.; Nolte, A.; Hellmig, S.; Schreiber, S.; Ott, S.J. Transcriptional activity of the dominant gut mucosal microbiota in chronic inflammatory bowel disease patients. J. Med. Microbiol. 2010, 59, 1114–1122. [CrossRef] [PubMed]
-
(2010)
J. Med. Microbiol
, vol.59
, pp. 1114-1122
-
-
Rehman, A.1
Lepage, P.2
Nolte, A.3
Hellmig, S.4
Schreiber, S.5
Ott, S.J.6
-
84
-
-
34548483459
-
Culture independent analysis of ileal mucosa reveals a selective increase in invasive escherichia coli of novel phylogeny relative to depletion of clostridiales in crohn’s disease involving the ileum
-
[CrossRef] [PubMed]
-
Baumgart, M.; Dogan, B.; Rishniw, M.; Weitzman, G.; Bosworth, B.; Yantiss, R.; Orsi, R.H.; Wiedmann, M.; McDonough, P.; Kim, S.G.; et al. Culture independent analysis of ileal mucosa reveals a selective increase in invasive escherichia coli of novel phylogeny relative to depletion of clostridiales in crohn’s disease involving the ileum. ISME J. 2007, 1, 403–418. [CrossRef] [PubMed]
-
(2007)
ISME J
, vol.1
, pp. 403-418
-
-
Baumgart, M.1
Dogan, B.2
Rishniw, M.3
Weitzman, G.4
Bosworth, B.5
Yantiss, R.6
Orsi, R.H.7
Wiedmann, M.8
McDonough, P.9
Kim, S.G.10
-
85
-
-
33750956239
-
Differences between tissue-associated intestinal microfloras of patients with Crohn’s disease and ulcerative colitis
-
[CrossRef] [PubMed]
-
Gophna, U.; Sommerfeld, K.; Gophna, S.; Doolittle, W.F.; Veldhuyzen van Zanten, S.J. Differences between tissue-associated intestinal microfloras of patients with Crohn’s disease and ulcerative colitis. J. Clin. Microbiol. 2006, 44, 4136–4141. [CrossRef] [PubMed]
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 4136-4141
-
-
Gophna, U.1
Sommerfeld, K.2
Gophna, S.3
Doolittle, W.F.4
Veldhuyzen van Zanten, S.J.5
-
86
-
-
34548399000
-
Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of enterobacteriaceae
-
[CrossRef] [PubMed]
-
Lupp, C.; Robertson, M.L.; Wickham, M.E.; Sekirov, I.; Champion, O.L.; Gaynor, E.C.; Finlay, B.B. Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of enterobacteriaceae. Cell Host Microbe 2007, 2, 119–129. [CrossRef] [PubMed]
-
(2007)
Cell Host Microbe
, vol.2
, pp. 119-129
-
-
Lupp, C.1
Robertson, M.L.2
Wickham, M.E.3
Sekirov, I.4
Champion, O.L.5
Gaynor, E.C.6
Finlay, B.B.7
-
87
-
-
66249129571
-
Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohn’s disease
-
[CrossRef] [PubMed]
-
Willing, B.; Halfvarson, J.; Dicksved, J.; Rosenquist, M.; Jarnerot, G.; Engstrand, L.; Tysk, C.; Jansson, J.K. Twin studies reveal specific imbalances in the mucosa-associated microbiota of patients with ileal Crohn’s disease. Inflamm. Bowel Dis. 2009, 15, 653–660. [CrossRef] [PubMed]
-
(2009)
Inflamm. Bowel Dis
, vol.15
, pp. 653-660
-
-
Willing, B.1
Halfvarson, J.2
Dicksved, J.3
Rosenquist, M.4
Jarnerot, G.5
Engstrand, L.6
Tysk, C.7
Jansson, J.K.8
-
88
-
-
0031758230
-
Presence of adherent Escherichia coli strains in ileal mucosa of patients with Crohn’s disease
-
[CrossRef]
-
Darfeuille-Michaud, A.; Neut, C.; Barnich, N.; Lederman, E.; di Martino, P.; Desreumaux, P.; Gambiez, L.; Joly, B.; Cortot, A.; Colombel, J.F. Presence of adherent Escherichia coli strains in ileal mucosa of patients with Crohn’s disease. Gastroenterology 1998, 115, 1405–1413. [CrossRef]
-
(1998)
Gastroenterology
, vol.115
, pp. 1405-1413
-
-
Darfeuille-Michaud, A.1
Neut, C.2
Barnich, N.3
Lederman, E.4
di Martino, P.5
Desreumaux, P.6
Gambiez, L.7
Joly, B.8
Cortot, A.9
Colombel, J.F.10
-
89
-
-
0032768352
-
Invasive ability of an Escherichia coli strain isolated from the ileal mucosa of a patient with Crohn’s disease
-
[PubMed]
-
Boudeau, J.; Glasser, A.L.; Masseret, E.; Joly, B.; Darfeuille-Michaud, A. Invasive ability of an Escherichia coli strain isolated from the ileal mucosa of a patient with Crohn’s disease. Infect. Immun. 1999, 67, 4499–4509. [PubMed]
-
(1999)
Infect. Immun
, vol.67
, pp. 4499-4509
-
-
Boudeau, J.1
Glasser, A.L.2
Masseret, E.3
Joly, B.4
Darfeuille-Michaud, A.5
-
90
-
-
4143069158
-
High prevalence of adherent-invasive Escherichia coli associated with ileal mucosa in Crohn’s disease
-
[CrossRef] [PubMed]
-
Darfeuille-Michaud, A.; Boudeau, J.; Bulois, P.; Neut, C.; Glasser, A.L.; Barnich, N.; Bringer, M.A.; Swidsinski, A.; Beaugerie, L.; Colombel, J.F. High prevalence of adherent-invasive Escherichia coli associated with ileal mucosa in Crohn’s disease. Gastroenterology 2004, 127, 412–421. [CrossRef] [PubMed]
-
(2004)
Gastroenterology
, vol.127
, pp. 412-421
-
-
Darfeuille-Michaud, A.1
Boudeau, J.2
Bulois, P.3
Neut, C.4
Glasser, A.L.5
Barnich, N.6
Bringer, M.A.7
Swidsinski, A.8
Beaugerie, L.9
Colombel, J.F.10
-
91
-
-
84902684907
-
Mycobacterium avium subspecies paratuberculosis causes Crohn’s disease in some inflammatory bowel disease patients
-
[CrossRef] [PubMed]
-
Naser, S.A.; Sagramsingh, S.R.; Naser, A.S.; Thanigachalam, S. Mycobacterium avium subspecies paratuberculosis causes Crohn’s disease in some inflammatory bowel disease patients. World J. Gastroenterol. 2014, 20, 7403–7415. [CrossRef] [PubMed]
-
(2014)
World J. Gastroenterol
, vol.20
, pp. 7403-7415
-
-
Naser, S.A.1
Sagramsingh, S.R.2
Naser, A.S.3
Thanigachalam, S.4
-
92
-
-
84942193176
-
Prevalence of Mycobacterium avium subsp. paratuberculosis and Escherichia coli in blood samples from patients with inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Nazareth, N.; Magro, F.; Machado, E.; Ribeiro, T.G.; Martinho, A.; Rodrigues, P.; Alves, R.; Macedo, G.N.; Gracio, D.; Coelho, R.; et al. Prevalence of Mycobacterium avium subsp. paratuberculosis and Escherichia coli in blood samples from patients with inflammatory bowel disease. Med. Microbiol. Immunol. 2015, 204, 681–692. [CrossRef] [PubMed]
-
(2015)
Med. Microbiol. Immunol
, vol.204
, pp. 681-692
-
-
Nazareth, N.1
Magro, F.2
Machado, E.3
Ribeiro, T.G.4
Martinho, A.5
Rodrigues, P.6
Alves, R.7
Macedo, G.N.8
Gracio, D.9
Coelho, R.10
-
93
-
-
80053094038
-
Prevalence of campylobacter species in adult Crohn’s disease and the preferential colonization sites of campylobacter species in the human intestine
-
[CrossRef] [PubMed]
-
Mahendran, V.; Riordan, S.M.; Grimm, M.C.; Tran, T.A.; Major, J.; Kaakoush, N.O.; Mitchell, H.; Zhang, L. Prevalence of campylobacter species in adult Crohn’s disease and the preferential colonization sites of campylobacter species in the human intestine. PLoS ONE 2011, 6, e25417. [CrossRef] [PubMed]
-
(2011)
PLoS ONE
, vol.6
, pp. e25417
-
-
Mahendran, V.1
Riordan, S.M.2
Grimm, M.C.3
Tran, T.A.4
Major, J.5
Kaakoush, N.O.6
Mitchell, H.7
Zhang, L.8
-
94
-
-
77952689163
-
Campylobacter concisus and other campylobacter species in children with newly diagnosed Crohn’s disease
-
[CrossRef] [PubMed]
-
Man, S.M.; Zhang, L.; Day, A.S.; Leach, S.T.; Lemberg, D.A.; Mitchell, H. Campylobacter concisus and other campylobacter species in children with newly diagnosed Crohn’s disease. Inflamm. Bowel Dis. 2010, 16, 1008–1016. [CrossRef] [PubMed]
-
(2010)
Inflamm. Bowel Dis
, vol.16
, pp. 1008-1016
-
-
Man, S.M.1
Zhang, L.2
Day, A.S.3
Leach, S.T.4
Lemberg, D.A.5
Mitchell, H.6
-
95
-
-
60849125086
-
Detection and isolation of campylobacter species other than C. jejuni from children with Crohn’s disease
-
[CrossRef] [PubMed]
-
Zhang, L.; Man, S.M.; Day, A.S.; Leach, S.T.; Lemberg, D.A.; Dutt, S.; Stormon, M.; Otley, A.; O’Loughlin, E.V.; Magoffin, A.; et al. Detection and isolation of campylobacter species other than C. jejuni from children with Crohn’s disease. J. Clin. Microbiol. 2009, 47, 453–455. [CrossRef] [PubMed]
-
(2009)
J. Clin. Microbiol
, vol.47
, pp. 453-455
-
-
Zhang, L.1
Man, S.M.2
Day, A.S.3
Leach, S.T.4
Lemberg, D.A.5
Dutt, S.6
Stormon, M.7
Otley, A.8
O’Loughlin, E.V.9
Magoffin, A.10
-
96
-
-
34548472378
-
Inflammation and apoptosis in clostridium difficile enteritis is mediated by PGE2 up-regulation of Fas ligand
-
[CrossRef] [PubMed]
-
Kim, H.; Rhee, S.H.; Pothoulakis, C.; Lamont, J.T. Inflammation and apoptosis in clostridium difficile enteritis is mediated by PGE2 up-regulation of Fas ligand. Gastroenterology 2007, 133, 875–886. [CrossRef] [PubMed]
-
(2007)
Gastroenterology
, vol.133
, pp. 875-886
-
-
Kim, H.1
Rhee, S.H.2
Pothoulakis, C.3
Lamont, J.T.4
-
97
-
-
33947111354
-
Impact of clostridium difficile on inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Issa, M.; Vijayapal, A.; Graham, M.B.; Beaulieu, D.B.; Otterson, M.F.; Lundeen, S.; Skaros, S.; Weber, L.R.; Komorowski, R.A.; Knox, J.F.; et al. Impact of clostridium difficile on inflammatory bowel disease. Clin. Gastroenterol. Hepatol. 2007, 5, 345–351. [CrossRef] [PubMed]
-
(2007)
Clin. Gastroenterol. Hepatol
, vol.5
, pp. 345-351
-
-
Issa, M.1
Vijayapal, A.2
Graham, M.B.3
Beaulieu, D.B.4
Otterson, M.F.5
Lundeen, S.6
Skaros, S.7
Weber, L.R.8
Komorowski, R.A.9
Knox, J.F.10
-
98
-
-
38049023064
-
Enterotoxigenic Bacteroides fragilis: A potential instigator of colitis
-
[CrossRef] [PubMed]
-
Rabizadeh, S.; Rhee, K.J.; Wu, S.; Huso, D.; Gan, C.M.; Golub, J.E.; Wu, X.; Zhang, M.; Sears, C.L. Enterotoxigenic Bacteroides fragilis: A potential instigator of colitis. Inflamm. Bowel Dis. 2007, 13, 1475–1483. [CrossRef] [PubMed]
-
(2007)
Inflamm. Bowel Dis
, vol.13
, pp. 1475-1483
-
-
Rabizadeh, S.1
Rhee, K.J.2
Wu, S.3
Huso, D.4
Gan, C.M.5
Golub, J.E.6
Wu, X.7
Zhang, M.8
Sears, C.L.9
-
99
-
-
79955569490
-
Development of the human gastrointestinal microbiota and insights from high-throughput sequencing
-
[CrossRef] [PubMed]
-
Dominguez-Bello, M.G.; Blaser, M.J.; Ley, R.E.; Knight, R. Development of the human gastrointestinal microbiota and insights from high-throughput sequencing. Gastroenterology 2011, 140, 1713–1719. [CrossRef] [PubMed]
-
(2011)
Gastroenterology
, vol.140
, pp. 1713-1719
-
-
Dominguez-Bello, M.G.1
Blaser, M.J.2
Ley, R.E.3
Knight, R.4
-
100
-
-
34547129847
-
Development of the human infant intestinal microbiota
-
[CrossRef] [PubMed]
-
Palmer, C.; Bik, E.M.; DiGiulio, D.B.; Relman, D.A.; Brown, P.O. Development of the human infant intestinal microbiota. PLoS Biol. 2007, 5, e177. [CrossRef] [PubMed]
-
(2007)
PLoS Biol
, vol.5
, pp. e177
-
-
Palmer, C.1
Bik, E.M.2
DiGiulio, D.B.3
Relman, D.A.4
Brown, P.O.5
-
101
-
-
79952763661
-
Succession of microbial consortia in the developing infant gut microbiome
-
[CrossRef] [PubMed]
-
Koenig, J.E.; Spor, A.; Scalfone, N.; Fricker, A.D.; Stombaugh, J.; Knight, R.; Angenent, L.T.; Ley, R.E. Succession of microbial consortia in the developing infant gut microbiome. Proc. Natl. Acad. Sci. USA 2011, 108, 4578–4585. [CrossRef] [PubMed]
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 4578-4585
-
-
Koenig, J.E.1
Spor, A.2
Scalfone, N.3
Fricker, A.D.4
Stombaugh, J.5
Knight, R.6
Angenent, L.T.7
Ley, R.E.8
-
102
-
-
84860450398
-
A metagenomic study of diet-dependent interaction between gut microbiota and host in infants reveals differences in immune response
-
[CrossRef] [PubMed]
-
Schwartz, S.; Friedberg, I.; Ivanov, I.V.; Davidson, L.A.; Goldsby, J.S.; Dahl, D.B.; Herman, D.; Wang, M.; Donovan, S.M.; Chapkin, R.S. A metagenomic study of diet-dependent interaction between gut microbiota and host in infants reveals differences in immune response. Genome Biol. 2012. [CrossRef] [PubMed]
-
(2012)
Genome Biol
-
-
Schwartz, S.1
Friedberg, I.2
Ivanov, I.V.3
Davidson, L.A.4
Goldsby, J.S.5
Dahl, D.B.6
Herman, D.7
Wang, M.8
Donovan, S.M.9
Chapkin, R.S.10
-
103
-
-
78049504118
-
Examination of faecal bifidobacterium populations in breast-and formula-fed infants during the first 18 months of life
-
[CrossRef] [PubMed]
-
Roger, L.C.; Costabile, A.; Holland, D.T.; Hoyles, L.; McCartney, A.L. Examination of faecal bifidobacterium populations in breast-and formula-fed infants during the first 18 months of life. Microbiology 2010, 156, 3329–3341. [CrossRef] [PubMed]
-
(2010)
Microbiology
, vol.156
, pp. 3329-3341
-
-
Roger, L.C.1
Costabile, A.2
Holland, D.T.3
Hoyles, L.4
McCartney, A.L.5
-
104
-
-
79955783588
-
Determinants of the human infant intestinal microbiota after the introduction of first complementary foods in infant samples from five European centres
-
[CrossRef] [PubMed]
-
Fallani, M.; Amarri, S.; Uusijarvi, A.; Adam, R.; Khanna, S.; Aguilera, M.; Gil, A.; Vieites, J.M.; Norin, E.; Young, D.; et al. Determinants of the human infant intestinal microbiota after the introduction of first complementary foods in infant samples from five European centres. Microbiology 2011, 157, 1385–1392. [CrossRef] [PubMed]
-
(2011)
Microbiology
, vol.157
, pp. 1385-1392
-
-
Fallani, M.1
Amarri, S.2
Uusijarvi, A.3
Adam, R.4
Khanna, S.5
Aguilera, M.6
Gil, A.7
Vieites, J.M.8
Norin, E.9
Young, D.10
-
105
-
-
77954423424
-
Intestinal microbiota of 6-week-old infants across Europe: Geographic influence beyond delivery mode, breast-feeding, and antibiotics
-
[CrossRef] [PubMed]
-
Fallani, M.; Young, D.; Scott, J.; Norin, E.; Amarri, S.; Adam, R.; Aguilera, M.; Khanna, S.; Gil, A.; Edwards, C.A.; et al. Intestinal microbiota of 6-week-old infants across Europe: Geographic influence beyond delivery mode, breast-feeding, and antibiotics. J. Pediatr. Gastroenterol. Nutr. 2010, 51, 77–84. [CrossRef] [PubMed]
-
(2010)
J. Pediatr. Gastroenterol. Nutr
, vol.51
, pp. 77-84
-
-
Fallani, M.1
Young, D.2
Scott, J.3
Norin, E.4
Amarri, S.5
Adam, R.6
Aguilera, M.7
Khanna, S.8
Gil, A.9
Edwards, C.A.10
-
106
-
-
74049134666
-
Role of diet in the development of inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Chapman-Kiddell, C.A.; Davies, P.S.; Gillen, L.; Radford-Smith, G.L. Role of diet in the development of inflammatory bowel disease. Inflamm. Bowel Dis. 2010, 16, 137–151. [CrossRef] [PubMed]
-
(2010)
Inflamm. Bowel Dis
, vol.16
, pp. 137-151
-
-
Chapman-Kiddell, C.A.1
Davies, P.S.2
Gillen, L.3
Radford-Smith, G.L.4
-
107
-
-
79953773560
-
Dietary intake and risk of developing inflammatory bowel disease: A systematic review of the literature
-
[CrossRef] [PubMed]
-
Hou, J.K.; Abraham, B.; El-Serag, H. Dietary intake and risk of developing inflammatory bowel disease: A systematic review of the literature. Am. J. Gastroenterol. 2011, 106, 563–573. [CrossRef] [PubMed]
-
(2011)
Am. J. Gastroenterol
, vol.106
, pp. 563-573
-
-
Hou, J.K.1
Abraham, B.2
El-Serag, H.3
-
108
-
-
84904460389
-
Future directions in inflammatory bowel disease management
-
[CrossRef] [PubMed]
-
D’Haens, G.R.; Sartor, R.B.; Silverberg, M.S.; Petersson, J.; Rutgeerts, P. Future directions in inflammatory bowel disease management. J. Crohns Colitis 2014, 8, 726–734. [CrossRef] [PubMed]
-
(2014)
J. Crohns Colitis
, vol.8
, pp. 726-734
-
-
D’Haens, G.R.1
Sartor, R.B.2
Silverberg, M.S.3
Petersson, J.4
Rutgeerts, P.5
-
109
-
-
84885951276
-
Review article: Evidence-based dietary advice for patients with inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Richman, E.; Rhodes, J.M. Review article: Evidence-based dietary advice for patients with inflammatory bowel disease. Aliment. Pharmacol. Ther. 2013, 38, 1156–1171. [CrossRef] [PubMed]
-
(2013)
Aliment. Pharmacol. Ther
, vol.38
, pp. 1156-1171
-
-
Richman, E.1
Rhodes, J.M.2
-
110
-
-
77957075815
-
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
-
[CrossRef] [PubMed]
-
De Filippo, C.; Cavalieri, D.; di Paola, M.; Ramazzotti, M.; Poullet, J.B.; Massart, S.; Collini, S.; Pieraccini, G.; Lionetti, P. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proc. Natl. Acad. Sci. USA 2010, 107, 14691–14696. [CrossRef] [PubMed]
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 14691-14696
-
-
De Filippo, C.1
Cavalieri, D.2
di Paola, M.3
Ramazzotti, M.4
Poullet, J.B.5
Massart, S.6
Collini, S.7
Pieraccini, G.8
Lionetti, P.9
-
111
-
-
84885959791
-
Review article: The association of diet with onset and relapse in patients with inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Spooren, C.E.; Pierik, M.J.; Zeegers, M.P.; Feskens, E.J.; Masclee, A.A.; Jonkers, D.M. Review article: The association of diet with onset and relapse in patients with inflammatory bowel disease. Aliment. Pharmacol. Ther. 2013, 38, 1172–1187. [CrossRef] [PubMed]
-
(2013)
Aliment. Pharmacol. Ther
, vol.38
, pp. 1172-1187
-
-
Spooren, C.E.1
Pierik, M.J.2
Zeegers, M.P.3
Feskens, E.J.4
Masclee, A.A.5
Jonkers, D.M.6
-
112
-
-
84908087121
-
Diet and inflammatory bowel disease: Review of patient-targeted recommendations
-
[CrossRef] [PubMed]
-
Hou, J.K.; Lee, D.; Lewis, J. Diet and inflammatory bowel disease: Review of patient-targeted recommendations. Clin. Gastroenterol. Hepatol. 2014, 12, 1592–1600. [CrossRef] [PubMed]
-
(2014)
Clin. Gastroenterol. Hepatol
, vol.12
, pp. 1592-1600
-
-
Hou, J.K.1
Lee, D.2
Lewis, J.3
-
113
-
-
84879651170
-
Environmental risk factors for inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Ananthakrishnan, A.N. Environmental risk factors for inflammatory bowel disease. Gastroenterol. Hepatol. 2013, 9, 367–374. [CrossRef] [PubMed]
-
(2013)
Gastroenterol. Hepatol
, vol.9
, pp. 367-374
-
-
Ananthakrishnan, A.N.1
-
114
-
-
84959930520
-
Diet therapy for inflammatory bowel diseases: The established and the new
-
[PubMed]
-
Durchschein, F.; Petritsch, W.; Hammer, H.F. Diet therapy for inflammatory bowel diseases: The established and the new. World J. Gastroenterol. 2016, 22, 2179–2194. [PubMed]
-
(2016)
World J. Gastroenterol
, vol.22
, pp. 2179-2194
-
-
Durchschein, F.1
Petritsch, W.2
Hammer, H.F.3
-
115
-
-
84966617030
-
Enteral feeding reduces metabolic activity of the intestinal microbiome in Crohn’s disease: An observational study
-
[CrossRef] [PubMed]
-
Walton, C.; Montoya, M.P.; Fowler, D.P.; Turner, C.; Jia, W.; Whitehead, R.N.; Griffiths, L.; Waring, R.H.; Ramsden, D.B.; Cole, J.A.; et al. Enteral feeding reduces metabolic activity of the intestinal microbiome in Crohn’s disease: An observational study. Eur. J. Clin. Nutr. 2016. [CrossRef] [PubMed]
-
(2016)
Eur. J. Clin. Nutr
-
-
Walton, C.1
Montoya, M.P.2
Fowler, D.P.3
Turner, C.4
Jia, W.5
Whitehead, R.N.6
Griffiths, L.7
Waring, R.H.8
Ramsden, D.B.9
Cole, J.A.10
-
116
-
-
84927642638
-
Effect of exclusive enteral nutrition on the microbiota of children with newly diagnosed Crohn’s disease
-
[CrossRef] [PubMed]
-
Kaakoush, N.O.; Day, A.S.; Leach, S.T.; Lemberg, D.A.; Nielsen, S.; Mitchell, H.M. Effect of exclusive enteral nutrition on the microbiota of children with newly diagnosed Crohn’s disease. Clin. Transl. Gastroenterol. 2015. [CrossRef] [PubMed]
-
(2015)
Clin. Transl. Gastroenterol
-
-
Kaakoush, N.O.1
Day, A.S.2
Leach, S.T.3
Lemberg, D.A.4
Nielsen, S.5
Mitchell, H.M.6
-
117
-
-
84930846556
-
Exclusive enteral nutrition in children with Crohn’s disease
-
[PubMed]
-
Day, A.S.; Lopez, R.N. Exclusive enteral nutrition in children with Crohn’s disease. World J. Gastroenterol. 2015, 21, 6809–6816. [PubMed]
-
(2015)
World J. Gastroenterol
, vol.21
, pp. 6809-6816
-
-
Day, A.S.1
Lopez, R.N.2
-
118
-
-
0033934166
-
Enteral nutrition and corticosteroids in the treatment of acute Crohn’s disease in children
-
[CrossRef] [PubMed]
-
Heuschkel, R.B.; Menache, C.C.; Megerian, J.T.; Baird, A.E. Enteral nutrition and corticosteroids in the treatment of acute Crohn’s disease in children. J. Pediatr. Gastroenterol. Nutr. 2000, 31, 8–15. [CrossRef] [PubMed]
-
(2000)
J. Pediatr. Gastroenterol. Nutr
, vol.31
, pp. 8-15
-
-
Heuschkel, R.B.1
Menache, C.C.2
Megerian, J.T.3
Baird, A.E.4
-
119
-
-
22844432124
-
Colonic Crohn’s disease in children does not respond well to treatment with enteral nutrition if the ileum is not involved
-
[CrossRef] [PubMed]
-
Afzal, N.A.; Davies, S.; Paintin, M.; Arnaud-Battandier, F.; Walker-Smith, J.A.; Murch, S.; Heuschkel, R.; Fell, J. Colonic Crohn’s disease in children does not respond well to treatment with enteral nutrition if the ileum is not involved. Dig. Dis. Sci. 2005, 50, 1471–1475. [CrossRef] [PubMed]
-
(2005)
Dig. Dis. Sci
, vol.50
, pp. 1471-1475
-
-
Afzal, N.A.1
Davies, S.2
Paintin, M.3
Arnaud-Battandier, F.4
Walker-Smith, J.A.5
Murch, S.6
Heuschkel, R.7
Fell, J.8
-
120
-
-
84962355471
-
Step-up fecal microbiota transplantation (FMT) strategy
-
[CrossRef] [PubMed]
-
Cui, B.; Li, P.; Xu, L.; Peng, Z.; Xiang, J.; He, Z.; Zhang, T.; Ji, G.; Nie, Y.; Wu, K.; et al. Step-up fecal microbiota transplantation (FMT) strategy. Gut Microbes 2016. [CrossRef] [PubMed]
-
(2016)
Gut Microbes
-
-
Cui, B.1
Li, P.2
Xu, L.3
Peng, Z.4
Xiang, J.5
He, Z.6
Zhang, T.7
Ji, G.8
Nie, Y.9
Wu, K.10
-
121
-
-
84908191514
-
Specific microbiome changes in a mouse model of parenteral nutrition associated liver injury and intestinal inflammation
-
[CrossRef] [PubMed]
-
Harris, J.K.; El Kasmi, K.C.; Anderson, A.L.; Devereaux, M.W.; Fillon, S.A.; Robertson, C.E.; Wagner, B.D.; Stevens, M.J.; Pace, N.R.; Sokol, R.J. Specific microbiome changes in a mouse model of parenteral nutrition associated liver injury and intestinal inflammation. PLoS ONE 2014, 9, e110396. [CrossRef] [PubMed]
-
(2014)
PLoS ONE
, vol.9
, pp. e110396
-
-
Harris, J.K.1
El Kasmi, K.C.2
Anderson, A.L.3
Devereaux, M.W.4
Fillon, S.A.5
Robertson, C.E.6
Wagner, B.D.7
Stevens, M.J.8
Pace, N.R.9
Sokol, R.J.10
-
122
-
-
84874704910
-
Diet-induced expansion of pathobionts in experimental colitis: Implications for tailored therapies
-
[CrossRef] [PubMed]
-
Devkota, S.; Chang, E.B. Diet-induced expansion of pathobionts in experimental colitis: Implications for tailored therapies. Gut Microbes 2013, 4, 172–174. [CrossRef] [PubMed]
-
(2013)
Gut Microbes
, vol.4
, pp. 172-174
-
-
Devkota, S.1
Chang, E.B.2
-
123
-
-
84863436944
-
Il10´/´ mice
-
[CrossRef] [PubMed]
-
Il10´/´ mice. Nature 2012, 487, 104–108. [CrossRef] [PubMed]
-
(2012)
Nature
, vol.487
, pp. 104-108
-
-
Devkota, S.1
Wang, Y.2
Musch, M.W.3
Leone, V.4
Fehlner-Peach, H.5
Nadimpalli, A.6
Antonopoulos, D.A.7
Jabri, B.8
Chang, E.B.9
-
124
-
-
0034959944
-
Combining genomics, metabolome analysis, and biochemical modelling to understand metabolic networks
-
[CrossRef] [PubMed]
-
Fiehn, O. Combining genomics, metabolome analysis, and biochemical modelling to understand metabolic networks. Comp. Funct Genomics 2001, 2, 155–168. [CrossRef] [PubMed]
-
(2001)
Comp. Funct Genomics
, vol.2
, pp. 155-168
-
-
Fiehn, O.1
-
125
-
-
33750431077
-
Metabolomics as a functional genomic tool for understanding lipid dysfunction in diabetes, obesity and related disorders
-
[CrossRef] [PubMed]
-
Griffin, J.L.; Nicholls, A.W. Metabolomics as a functional genomic tool for understanding lipid dysfunction in diabetes, obesity and related disorders. Pharmacogenomics 2006, 7, 1095–1107. [CrossRef] [PubMed]
-
(2006)
Pharmacogenomics
, vol.7
, pp. 1095-1107
-
-
Griffin, J.L.1
Nicholls, A.W.2
-
126
-
-
0032694577
-
”Metabonomics”: Understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data
-
[CrossRef] [PubMed]
-
Nicholson, J.K.; Lindon, J.C.; Holmes, E. ”Metabonomics”: Understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data. Xenobiotica 1999, 29, 1181–1189. [CrossRef] [PubMed]
-
(1999)
Xenobiotica
, vol.29
, pp. 1181-1189
-
-
Nicholson, J.K.1
Lindon, J.C.2
Holmes, E.3
-
127
-
-
84872535919
-
Xenobiotics shape the physiology and gene expression of the active human gut microbiome
-
[CrossRef] [PubMed]
-
Maurice, C.F.; Haiser, H.J.; Turnbaugh, P.J. Xenobiotics shape the physiology and gene expression of the active human gut microbiome. Cell 2013, 152, 39–50. [CrossRef] [PubMed]
-
(2013)
Cell
, vol.152
, pp. 39-50
-
-
Maurice, C.F.1
Haiser, H.J.2
Turnbaugh, P.J.3
-
128
-
-
80054960299
-
The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins
-
[CrossRef] [PubMed]
-
McNulty, N.P.; Yatsunenko, T.; Hsiao, A.; Faith, J.J.; Muegge, B.D.; Goodman, A.L.; Henrissat, B.; Oozeer, R.; Cools-Portier, S.; Gobert, G.; et al. The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins. Sci. Transl. Med. 2011. [CrossRef] [PubMed]
-
(2011)
Sci. Transl. Med
-
-
McNulty, N.P.1
Yatsunenko, T.2
Hsiao, A.3
Faith, J.J.4
Muegge, B.D.5
Goodman, A.L.6
Henrissat, B.7
Oozeer, R.8
Cools-Portier, S.9
Gobert, G.10
-
129
-
-
84884671077
-
A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice
-
[CrossRef] [PubMed]
-
Marcobal, A.; Kashyap, P.C.; Nelson, T.A.; Aronov, P.A.; Donia, M.S.; Spormann, A.; Fischbach, M.A.; Sonnenburg, J.L. A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice. Isme J. 2013, 7, 1933–1943. [CrossRef] [PubMed]
-
(2013)
Isme J
, vol.7
, pp. 1933-1943
-
-
Marcobal, A.1
Kashyap, P.C.2
Nelson, T.A.3
Aronov, P.A.4
Donia, M.S.5
Spormann, A.6
Fischbach, M.A.7
Sonnenburg, J.L.8
-
130
-
-
0036007687
-
Metabolomics—The link between genotypes and phenotypes
-
[CrossRef] [PubMed]
-
Fiehn, O. Metabolomics—The link between genotypes and phenotypes. Plant Mol. Biol. 2002, 48, 155–171. [CrossRef] [PubMed]
-
(2002)
Plant Mol. Biol
, vol.48
, pp. 155-171
-
-
Fiehn, O.1
-
131
-
-
33847660127
-
Time-course metabolic profiling in Arabidopsis thaliana cell cultures after salt stress treatment
-
[CrossRef] [PubMed]
-
Kim, J.K.; Bamba, T.; Harada, K.; Fukusaki, E.; Kobayashi, A. Time-course metabolic profiling in Arabidopsis thaliana cell cultures after salt stress treatment. J. Exp. Bot. 2007, 58, 415–424. [CrossRef] [PubMed]
-
(2007)
J. Exp. Bot
, vol.58
, pp. 415-424
-
-
Kim, J.K.1
Bamba, T.2
Harada, K.3
Fukusaki, E.4
Kobayashi, A.5
-
132
-
-
34347239963
-
A high-throughput method for microbial metabolome analysis using gas chromatography/mass spectrometry
-
[CrossRef] [PubMed]
-
Borner, J.; Buchinger, S.; Schomburg, D. A high-throughput method for microbial metabolome analysis using gas chromatography/mass spectrometry. Anal. Biochem. 2007, 367, 143–151. [CrossRef] [PubMed]
-
(2007)
Anal. Biochem
, vol.367
, pp. 143-151
-
-
Borner, J.1
Buchinger, S.2
Schomburg, D.3
-
133
-
-
33947216093
-
A comprehensive urinary metabolomic approach for identifying kidney cancerr
-
[CrossRef] [PubMed]
-
Kind, T.; Tolstikov, V.; Fiehn, O.; Weiss, R.H. A comprehensive urinary metabolomic approach for identifying kidney cancerr. Anal. Biochem. 2007, 363, 185–195. [CrossRef] [PubMed]
-
(2007)
Anal. Biochem
, vol.363
, pp. 185-195
-
-
Kind, T.1
Tolstikov, V.2
Fiehn, O.3
Weiss, R.H.4
-
134
-
-
34249851432
-
Application of gas chromatography-mass spectrometry metabolite profiling techniques to the analysis of heathland plant diets of sheep
-
[CrossRef] [PubMed]
-
Parveen, I.; Moorby, J.M.; Fraser, M.D.; Allison, G.G.; Kopka, J. Application of gas chromatography-mass spectrometry metabolite profiling techniques to the analysis of heathland plant diets of sheep. J. Agric. Food Chem. 2007, 55, 1129–1138. [CrossRef] [PubMed]
-
(2007)
J. Agric. Food Chem
, vol.55
, pp. 1129-1138
-
-
Parveen, I.1
Moorby, J.M.2
Fraser, M.D.3
Allison, G.G.4
Kopka, J.5
-
135
-
-
84861964370
-
Is it time for a metagenomic basis of therapeutics?
-
[CrossRef] [PubMed]
-
Haiser, H.J.; Turnbaugh, P.J. Is it time for a metagenomic basis of therapeutics? Science 2012, 336, 1253–1255. [CrossRef] [PubMed]
-
(2012)
Science
, vol.336
, pp. 1253-1255
-
-
Haiser, H.J.1
Turnbaugh, P.J.2
-
136
-
-
79959895766
-
Gcms-based metabolomic study in mice with colitis induced by dextran sulfate sodium
-
[CrossRef] [PubMed]
-
Shiomi, Y.; Nishiumi, S.; Ooi, M.; Hatano, N.; Shinohara, M.; Yoshie, T.; Kondo, Y.; Furumatsu, K.; Shiomi, H.; Kutsumi, H.; et al. Gcms-based metabolomic study in mice with colitis induced by dextran sulfate sodium. Inflamm. Bowel Dis. 2011, 17, 2261–2274. [CrossRef] [PubMed]
-
(2011)
Inflamm. Bowel Dis
, vol.17
, pp. 2261-2274
-
-
Shiomi, Y.1
Nishiumi, S.2
Ooi, M.3
Hatano, N.4
Shinohara, M.5
Yoshie, T.6
Kondo, Y.7
Furumatsu, K.8
Shiomi, H.9
Kutsumi, H.10
-
137
-
-
84891801816
-
Serum and urine metabolomic fingerprinting in diagnostics of inflammatory bowel diseases
-
[CrossRef] [PubMed]
-
Dawiskiba, T.; Deja, S.; Mulak, A.; Zabek, A.; Jawien, E.; Pawelka, D.; Banasik, M.; Mastalerz-Migas, A.; Balcerzak, W.; Kaliszewski, K.; et al. Serum and urine metabolomic fingerprinting in diagnostics of inflammatory bowel diseases. World J. Gastroenterol. 2014, 20, 163–174. [CrossRef] [PubMed]
-
(2014)
World J. Gastroenterol
, vol.20
, pp. 163-174
-
-
Dawiskiba, T.1
Deja, S.2
Mulak, A.3
Zabek, A.4
Jawien, E.5
Pawelka, D.6
Banasik, M.7
Mastalerz-Migas, A.8
Balcerzak, W.9
Kaliszewski, K.10
-
138
-
-
84922390026
-
Faecal metabolite profiling identifies medium-chain fatty acids as discriminating compounds in IBD
-
[CrossRef] [PubMed]
-
De Preter, V.; Machiels, K.; Joossens, M.; Arijs, I.; Matthys, C.; Vermeire, S.; Rutgeerts, P.; Verbeke, K. Faecal metabolite profiling identifies medium-chain fatty acids as discriminating compounds in IBD. Gut 2015, 64, 447–458. [CrossRef] [PubMed]
-
(2015)
Gut
, vol.64
, pp. 447-458
-
-
De Preter, V.1
Machiels, K.2
Joossens, M.3
Arijs, I.4
Matthys, C.5
Vermeire, S.6
Rutgeerts, P.7
Verbeke, K.8
-
139
-
-
85020146127
-
Fodmaps alter symptoms and the metabolome of patients with IBS: A randomised controlled trial
-
[CrossRef] [PubMed]
-
McIntosh, K.; Reed, D.E.; Schneider, T.; Dang, F.; Keshteli, A.H.; de Palma, G.; Madsen, K.; Bercik, P.; Vanner, S. Fodmaps alter symptoms and the metabolome of patients with IBS: A randomised controlled trial. Gut 2016. [CrossRef] [PubMed]
-
(2016)
Gut
-
-
McIntosh, K.1
Reed, D.E.2
Schneider, T.3
Dang, F.4
Keshteli, A.H.5
de Palma, G.6
Madsen, K.7
Bercik, P.8
Vanner, S.9
-
140
-
-
84904048875
-
A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis
-
[CrossRef] [PubMed]
-
Machiels, K.; Joossens, M.; Sabino, J.; de Preter, V.; Arijs, I.; Eeckhaut, V.; Ballet, V.; Claes, K.; van Immerseel, F.; Verbeke, K.; et al. A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis. Gut 2014, 63, 1275–1283. [CrossRef] [PubMed]
-
(2014)
Gut
, vol.63
, pp. 1275-1283
-
-
Machiels, K.1
Joossens, M.2
Sabino, J.3
de Preter, V.4
Arijs, I.5
Eeckhaut, V.6
Ballet, V.7
Claes, K.8
van Immerseel, F.9
Verbeke, K.10
-
141
-
-
84893029775
-
Increased proportions of bifidobacterium and the lactobacillus group and loss of butyrate-producing bacteria in inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Wang, W.; Chen, L.; Zhou, R.; Wang, X.; Song, L.; Huang, S.; Wang, G.; Xia, B. Increased proportions of bifidobacterium and the lactobacillus group and loss of butyrate-producing bacteria in inflammatory bowel disease. J. Clin. Microbiol. 2014, 52, 398–406. [CrossRef] [PubMed]
-
(2014)
J. Clin. Microbiol
, vol.52
, pp. 398-406
-
-
Wang, W.1
Chen, L.2
Zhou, R.3
Wang, X.4
Song, L.5
Huang, S.6
Wang, G.7
Xia, B.8
-
142
-
-
84924350477
-
Drugging the gut microbiome
-
[CrossRef] [PubMed]
-
Garber, K. Drugging the gut microbiome. Nat. Biotechnol. 2015, 33, 228–231. [CrossRef] [PubMed]
-
(2015)
Nat. Biotechnol
, vol.33
, pp. 228-231
-
-
Garber, K.1
-
143
-
-
85010874818
-
Irritable bowel syndrome: New insights into symptom mechanisms and advances in treatment
-
[CrossRef] [PubMed]
-
Spiller, R. Irritable bowel syndrome: New insights into symptom mechanisms and advances in treatment. F1000Research 2016. [CrossRef] [PubMed]
-
(2016)
F1000Research
-
-
Spiller, R.1
-
144
-
-
57049170939
-
Metabolism of the colonic mucosa in patients with inflammatory bowel diseases: An in vitro proton magnetic resonance spectroscopy study
-
[CrossRef] [PubMed]
-
Balasubramanian, K.; Kumar, S.; Singh, R.R.; Sharma, U.; Ahuja, V.; Makharia, G.K.; Jagannathan, N.R. Metabolism of the colonic mucosa in patients with inflammatory bowel diseases: An in vitro proton magnetic resonance spectroscopy study. Magn. Reson. Imaging 2009, 27, 79–86. [CrossRef] [PubMed]
-
(2009)
Magn. Reson. Imaging
, vol.27
, pp. 79-86
-
-
Balasubramanian, K.1
Kumar, S.2
Singh, R.R.3
Sharma, U.4
Ahuja, V.5
Makharia, G.K.6
Jagannathan, N.R.7
-
145
-
-
0034745979
-
1 H magnetic resonance spectroscopy in inflammatory bowel diseases: Distinguishing ulcerative colitis from Crohn’s disease
-
[CrossRef] [PubMed]
-
1 H magnetic resonance spectroscopy in inflammatory bowel diseases: Distinguishing ulcerative colitis from Crohn’s disease. Am. J. Gastroenterol. 2001, 96, 442–448. [CrossRef] [PubMed]
-
(2001)
Am. J. Gastroenterol
, vol.96
, pp. 442-448
-
-
Bezabeh, T.1
Somorjai, R.L.2
Smith, I.C.3
Nikulin, A.E.4
Dolenko, B.5
Bernstein, C.N.6
-
146
-
-
34447335050
-
Ileal pouch surgery for ulcerative colitis
-
[CrossRef] [PubMed]
-
Bach, S.P.; Mortensen, N.J. Ileal pouch surgery for ulcerative colitis. World J. Gastroenterol. 2007, 13, 3288–3300. [CrossRef] [PubMed]
-
(2007)
World J. Gastroenterol
, vol.13
, pp. 3288-3300
-
-
Bach, S.P.1
Mortensen, N.J.2
-
147
-
-
84920506867
-
A contemporary and critical appraisal of ”indeterminate colitis”
-
[CrossRef] [PubMed]
-
Odze, R.D. A contemporary and critical appraisal of ”indeterminate colitis”. Mod. Pathol. 2015, 28, S30–S46. [CrossRef] [PubMed]
-
(2015)
Mod. Pathol
, vol.28
, pp. S30-S46
-
-
Odze, R.D.1
-
148
-
-
84920901942
-
Differential diagnosis in inflammatory bowel disease colitis: State of the art and future perspectives
-
[CrossRef] [PubMed]
-
Tontini, G.E.; Vecchi, M.; Pastorelli, L.; Neurath, M.F.; Neumann, H. Differential diagnosis in inflammatory bowel disease colitis: State of the art and future perspectives. World J. Gastroenterol. 2015, 21, 21–46. [CrossRef] [PubMed]
-
(2015)
World J. Gastroenterol
, vol.21
, pp. 21-46
-
-
Tontini, G.E.1
Vecchi, M.2
Pastorelli, L.3
Neurath, M.F.4
Neumann, H.5
-
149
-
-
77957860638
-
New serologic markers for inflammatory bowel disease diagnosis
-
[CrossRef] [PubMed]
-
Dotan, I. New serologic markers for inflammatory bowel disease diagnosis. Dig. Dis. 2010, 28, 418–423. [CrossRef] [PubMed]
-
(2010)
Dig. Dis
, vol.28
, pp. 418-423
-
-
Dotan, I.1
-
150
-
-
84875840665
-
Serological markers predict inflammatory bowel disease years before the diagnosis
-
[CrossRef] [PubMed]
-
Van Schaik, F.D.; Oldenburg, B.; Hart, A.R.; Siersema, P.D.; Lindgren, S.; Grip, O.; Teucher, B.; Kaaks, R.; Bergmann, M.M.; Boeing, H.; et al. Serological markers predict inflammatory bowel disease years before the diagnosis. Gut 2013, 62, 683–688. [CrossRef] [PubMed]
-
(2013)
Gut
, vol.62
, pp. 683-688
-
-
Van Schaik, F.D.1
Oldenburg, B.2
Hart, A.R.3
Siersema, P.D.4
Lindgren, S.5
Grip, O.6
Teucher, B.7
Kaaks, R.8
Bergmann, M.M.9
Boeing, H.10
-
151
-
-
8744262944
-
Serologic testing with ANCA, ASCA, and anti-OmpC in children and young adults with Crohn’s disease and ulcerative colitis: Diagnostic value and correlation with disease phenotype
-
[CrossRef] [PubMed]
-
Zholudev, A.; Zurakowski, D.; Young, W.; Leichtner, A.; Bousvaros, A. Serologic testing with ANCA, ASCA, and anti-OmpC in children and young adults with Crohn’s disease and ulcerative colitis: Diagnostic value and correlation with disease phenotype. Am. J. Gastroenterol. 2004, 99, 2235–2241. [CrossRef] [PubMed]
-
(2004)
Am. J. Gastroenterol
, vol.99
, pp. 2235-2241
-
-
Zholudev, A.1
Zurakowski, D.2
Young, W.3
Leichtner, A.4
Bousvaros, A.5
-
152
-
-
84873550266
-
Serological markers of inflammatory bowel disease
-
[CrossRef]
-
Kuna, A.T. Serological markers of inflammatory bowel disease. Biochem. Med. 2013, 23, 28–42. [CrossRef]
-
(2013)
Biochem. Med
, vol.23
, pp. 28-42
-
-
Kuna, A.T.1
-
153
-
-
84861808541
-
1 H NMR spectroscopy discriminates between patients with inflammatory bowel disease and healthy individuals
-
[CrossRef] [PubMed]
-
1 H NMR spectroscopy discriminates between patients with inflammatory bowel disease and healthy individuals. J. Proteome Res. 2012, 11, 3344–3357. [CrossRef] [PubMed]
-
(2012)
J. Proteome Res
, vol.11
, pp. 3344-3357
-
-
Schicho, R.1
Shaykhutdinov, R.2
Ngo, J.3
Nazyrova, A.4
Schneider, C.5
Panaccione, R.6
Kaplan, G.G.7
Vogel, H.J.8
Storr, M.9
-
154
-
-
84866353478
-
Serum metabolic profiling in inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Williams, H.R.; Willsmore, J.D.; Cox, I.J.; Walker, D.G.; Cobbold, J.F.; Taylor-Robinson, S.D.; Orchard, T.R. Serum metabolic profiling in inflammatory bowel disease. Dig. Dis. Sci. 2012, 57, 2157–2165. [CrossRef] [PubMed]
-
(2012)
Dig. Dis. Sci
, vol.57
, pp. 2157-2165
-
-
Williams, H.R.1
Willsmore, J.D.2
Cox, I.J.3
Walker, D.G.4
Cobbold, J.F.5
Taylor-Robinson, S.D.6
Orchard, T.R.7
-
155
-
-
84872457485
-
Urinary NMR metabolomic profiles discriminate inflammatory bowel disease from healthy
-
[CrossRef] [PubMed]
-
Stephens, N.S.; Siffledeen, J.; Su, X.; Murdoch, T.B.; Fedorak, R.N.; Slupsky, C.M. Urinary NMR metabolomic profiles discriminate inflammatory bowel disease from healthy. J. Crohns Colitis 2013, 7, e42–e48. [CrossRef] [PubMed]
-
(2013)
J. Crohns Colitis
, vol.7
, pp. e42-e48
-
-
Stephens, N.S.1
Siffledeen, J.2
Su, X.3
Murdoch, T.B.4
Fedorak, R.N.5
Slupsky, C.M.6
-
156
-
-
80052481927
-
Metabolomics of fecal extracts detects altered metabolic activity of gut microbiota in ulcerative colitis and irritable bowel syndrome
-
[CrossRef] [PubMed]
-
Le Gall, G.; Noor, S.O.; Ridgway, K.; Scovell, L.; Jamieson, C.; Johnson, I.T.; Colquhoun, I.J.; Kemsley, E.K.; Narbad, A. Metabolomics of fecal extracts detects altered metabolic activity of gut microbiota in ulcerative colitis and irritable bowel syndrome. J. Proteome Res. 2011, 10, 4208–4218. [CrossRef] [PubMed]
-
(2011)
J. Proteome Res
, vol.10
, pp. 4208-4218
-
-
Le Gall, G.1
Noor, S.O.2
Ridgway, K.3
Scovell, L.4
Jamieson, C.5
Johnson, I.T.6
Colquhoun, I.J.7
Kemsley, E.K.8
Narbad, A.9
-
157
-
-
76149113262
-
Metabonomics in ulcerative colitis: Diagnostics, biomarker identification, and insight into the pathophysiology
-
[CrossRef] [PubMed]
-
Bjerrum, J.T.; Nielsen, O.H.; Hao, F.; Tang, H.; Nicholson, J.K.; Wang, Y.; Olsen, J. Metabonomics in ulcerative colitis: Diagnostics, biomarker identification, and insight into the pathophysiology. J. Proteome Res. 2010, 9, 954–962. [CrossRef] [PubMed]
-
(2010)
J. Proteome Res
, vol.9
, pp. 954-962
-
-
Bjerrum, J.T.1
Nielsen, O.H.2
Hao, F.3
Tang, H.4
Nicholson, J.K.5
Wang, Y.6
Olsen, J.7
-
158
-
-
66949180452
-
Characterization of inflammatory bowel disease with urinary metabolic profiling
-
[CrossRef] [PubMed]
-
Williams, H.R.; Cox, I.J.; Walker, D.G.; North, B.V.; Patel, V.M.; Marshall, S.E.; Jewell, D.P.; Ghosh, S.; Thomas, H.J.; Teare, J.P.; et al. Characterization of inflammatory bowel disease with urinary metabolic profiling. Am. J. Gastroenterol. 2009, 104, 1435–1444. [CrossRef] [PubMed]
-
(2009)
Am. J. Gastroenterol
, vol.104
, pp. 1435-1444
-
-
Williams, H.R.1
Cox, I.J.2
Walker, D.G.3
North, B.V.4
Patel, V.M.5
Marshall, S.E.6
Jewell, D.P.7
Ghosh, S.8
Thomas, H.J.9
Teare, J.P.10
-
159
-
-
68149099597
-
Metabolomics reveals metabolic biomarkers of Crohn’s disease
-
[CrossRef] [PubMed]
-
Jansson, J.; Willing, B.; Lucio, M.; Fekete, A.; Dicksved, J.; Halfvarson, J.; Tysk, C.; Schmitt-Kopplin, P. Metabolomics reveals metabolic biomarkers of Crohn’s disease. PLoS ONE 2009, 4, e6386. [CrossRef] [PubMed]
-
(2009)
PLoS ONE
, vol.4
, pp. e6386
-
-
Jansson, J.1
Willing, B.2
Lucio, M.3
Fekete, A.4
Dicksved, J.5
Halfvarson, J.6
Tysk, C.7
Schmitt-Kopplin, P.8
-
160
-
-
33645019411
-
Specificities of the fecal microbiota in inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Sokol, H.; Seksik, P.; Rigottier-Gois, L.; Lay, C.; Lepage, P.; Podglajen, I.; Marteau, P.; Dore, J. Specificities of the fecal microbiota in inflammatory bowel disease. Inflamm. Bowel Dis. 2006, 12, 106–111. [CrossRef] [PubMed]
-
(2006)
Inflamm. Bowel Dis
, vol.12
, pp. 106-111
-
-
Sokol, H.1
Seksik, P.2
Rigottier-Gois, L.3
Lay, C.4
Lepage, P.5
Podglajen, I.6
Marteau, P.7
Dore, J.8
-
161
-
-
55949121870
-
Therapeutic correction of bacterial dysbiosis discovered by molecular techniques
-
[CrossRef] [PubMed]
-
Sartor, R.B. Therapeutic correction of bacterial dysbiosis discovered by molecular techniques. Proc. Natl. Acad. Sci. USA 2008, 105, 16413–16414. [CrossRef] [PubMed]
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 16413-16414
-
-
Sartor, R.B.1
-
162
-
-
33847378014
-
Rapid and noninvasive metabonomic characterization of inflammatory bowel disease
-
[CrossRef] [PubMed]
-
Marchesi, J.R.; Holmes, E.; Khan, F.; Kochhar, S.; Scanlan, P.; Shanahan, F.; Wilson, I.D.; Wang, Y. Rapid and noninvasive metabonomic characterization of inflammatory bowel disease. J. Proteome Res. 2007, 6, 546–551. [CrossRef] [PubMed]
-
(2007)
J. Proteome Res
, vol.6
, pp. 546-551
-
-
Marchesi, J.R.1
Holmes, E.2
Khan, F.3
Kochhar, S.4
Scanlan, P.5
Shanahan, F.6
Wilson, I.D.7
Wang, Y.8
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