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Volumn 70, Issue 4, 2020, Pages 2580-2587

Lactobacillus Enshiensis sp. nov., a novel arsenic-resistant bacterium

Author keywords

Flavour compound; Genome. Abbreviations: ANI, average nucleotide identity; GGDC, Genome to Genome Distance; Lactic acid bacteria; Phylogeny

Indexed keywords

2,3 BUTANEDIOL; ACETOIN; ARSENIC; BACTERIAL DNA; FATTY ACID; GENOMIC DNA; LACTIC ACID; NUCLEOTIDE; RNA 16S;

EID: 85086792960     PISSN: 14665026     EISSN: 14665034     Source Type: Journal    
DOI: 10.1099/IJSEM.0.004072     Document Type: Article
Times cited : (23)

References (42)
  • 1
    • 33847673288 scopus 로고    scopus 로고
    • The genus Lactobacillus--a genomic basis for understanding its diversity
    • Claesson MJ, van Sinderen D, O'Toole PW. The genus Lactobacillus--a genomic basis for understanding its diversity. FEMS Microbiol Lett 2007;269:22–28.
    • (2007) FEMS Microbiol Lett , vol.269 , pp. 22-28
    • Claesson, MJ1    van Sinderen, D2    O'Toole, PW.3
  • 2
    • 85069681763 scopus 로고    scopus 로고
    • Effect of different Lacto-bacillus species on volatile and nonvolatile flavor compounds in juices fermentation
    • Cui S, Zhao N, Lu W, Zhao F, Zheng S et al. Effect of different Lacto-bacillus species on volatile and nonvolatile flavor compounds in juices fermentation. Food Sci Nutr 2019;7:2214–2223.
    • (2019) Food Sci Nutr , vol.7 , pp. 2214-2223
    • Cui, S1    Zhao, N2    Lu, W3    Zhao, F4    Zheng, S5
  • 3
    • 85065541603 scopus 로고    scopus 로고
    • A metagenomic analysis of the relationship between microorganisms and flavor development in Shaoxing mechanized huangjiu fermentation mashes
    • Liu S, Chen Q, Zou H, Yu Y, Zhou Z et al. A metagenomic analysis of the relationship between microorganisms and flavor development in Shaoxing mechanized huangjiu fermentation mashes. Int J Food Microbiol 2019;303:9–18.
    • (2019) Int J Food Microbiol , vol.303 , pp. 9-18
    • Liu, S1    Chen, Q2    Zou, H3    Yu, Y4    Zhou, Z5
  • 5
    • 84891817929 scopus 로고    scopus 로고
    • LPSN--list of prokaryotic names with standing in nomen-clature
    • Parte AC. LPSN--list of prokaryotic names with standing in nomen-clature. Nucleic Acids Res 2014;42:D613–D616.
    • (2014) Nucleic Acids Res , vol.42 , pp. D613-D616
    • Parte, AC.1
  • 7
    • 85026291211 scopus 로고    scopus 로고
    • Bacterial community diversity of traditional fermented vegetables in China
    • Liu D, Tong C. Bacterial community diversity of traditional fermented vegetables in China. LWT 2017;86:40–48.
    • (2017) LWT , vol.86 , pp. 40-48
    • Liu, D1    Tong, C.2
  • 8
    • 85071067778 scopus 로고    scopus 로고
    • Lactobacillus jixianensis sp. nov., Lactobacillus baoqingensis sp. nov., Lactobacillus jiayinensis sp. nov., Lactoba-cillus zhaoyuanensis sp. nov., Lactobacillus lindianensis sp. nov., Lactobacillus huananensis sp. nov., Lactobacillus tangyuanensis sp. nov., Lactobacillus fuyuanensis sp. nov., Lactobacillus tongjiangensis sp. nov., Lactobacillus fujinensis sp. nov. and Lactobacillus mulen-gensis sp. nov., isolated from Chinese traditional pickle
    • Long GY, Gu CT. Lactobacillus jixianensis sp. nov., Lactobacillus baoqingensis sp. nov., Lactobacillus jiayinensis sp. nov., Lactoba-cillus zhaoyuanensis sp. nov., Lactobacillus lindianensis sp. nov., Lactobacillus huananensis sp. nov., Lactobacillus tangyuanensis sp. nov., Lactobacillus fuyuanensis sp. nov., Lactobacillus tongjiangensis sp. nov., Lactobacillus fujinensis sp. nov. and Lactobacillus mulen-gensis sp. nov., isolated from Chinese traditional pickle. Int J Syst Evol Microbiol 2019;69:2340–2353.
    • (2019) Int J Syst Evol Microbiol , vol.69 , pp. 2340-2353
    • Long, GY1    Gu, CT.2
  • 9
    • 85072790677 scopus 로고    scopus 로고
    • Lactobacillus yilanensis sp. nov., Lactobacillus bayan-ensis sp. nov., Lactobacillus keshanensis sp. nov., Lactobacillus kedongensis sp. nov., Lactobacillus baiquanensis sp. nov., Lactoba-cillus jidongensis sp. nov., Lactobacillus hulinensis sp. nov., Lactoba-cillus mishanensis sp. nov. and Lactobacillus zhongbaensis sp. nov., isolated from Chinese traditional pickle and yogurt
    • Wei YX, Gu CT. Lactobacillus yilanensis sp. nov., Lactobacillus bayan-ensis sp. nov., Lactobacillus keshanensis sp. nov., Lactobacillus kedongensis sp. nov., Lactobacillus baiquanensis sp. nov., Lactoba-cillus jidongensis sp. nov., Lactobacillus hulinensis sp. nov., Lactoba-cillus mishanensis sp. nov. and Lactobacillus zhongbaensis sp. nov., isolated from Chinese traditional pickle and yogurt. Int J Syst Evol Microbiol 2019;69:3178–3190.
    • (2019) Int J Syst Evol Microbiol , vol.69 , pp. 3178-3190
    • Wei, YX1    Gu, CT.2
  • 10
    • 85072790867 scopus 로고    scopus 로고
    • Lactobacillus pingfangensis sp. nov., Lactobacillus daoliensis sp. nov., Lactobacillus nangangensis sp. nov., Lactoba-cillus daowaiensis sp. nov., Lactobacillus dongliensis sp. nov., Lacto-bacillus songbeiensis sp. nov. and Lactobacillus kaifaensis sp. nov., isolated from traditional Chinese pickle
    • Liu DD, Gu CT. Lactobacillus pingfangensis sp. nov., Lactobacillus daoliensis sp. nov., Lactobacillus nangangensis sp. nov., Lactoba-cillus daowaiensis sp. nov., Lactobacillus dongliensis sp. nov., Lacto-bacillus songbeiensis sp. nov. and Lactobacillus kaifaensis sp. nov., isolated from traditional Chinese pickle. Int J Syst Evol Microbiol 2019;69:3237–3247.
    • (2019) Int J Syst Evol Microbiol , vol.69 , pp. 3237-3247
    • Liu, DD1    Gu, CT.2
  • 11
    • 85071069758 scopus 로고    scopus 로고
    • Lactobacillus zhachilii sp. nov., a lactic acid bacterium isolated from Zha-Chili
    • Zhang Z, Hou Q, Wang Y, Li W, Zhao H et al. Lactobacillus zhachilii sp. nov., a lactic acid bacterium isolated from Zha-Chili. Int J Syst Evol Microbiol 2019;69:2196–2201.
    • (2019) Int J Syst Evol Microbiol , vol.69 , pp. 2196-2201
    • Zhang, Z1    Hou, Q2    Wang, Y3    Li, W4    Zhao, H5
  • 12
    • 0037239111 scopus 로고    scopus 로고
    • Applica-tion of terminal RFLP analysis to characterize oral bacterial flora in saliva of healthy subjects and patients with periodontitis
    • Sakamoto M, Takeuchi Y, Umeda M, Ishikawa I, Benno Y. Applica-tion of terminal RFLP analysis to characterize oral bacterial flora in saliva of healthy subjects and patients with periodontitis. J Med Microbiol 2003;52:79–89.
    • (2003) J Med Microbiol , vol.52 , pp. 79-89
    • Sakamoto, M1    Takeuchi, Y2    Umeda, M3    Ishikawa, I4    Benno, Y.5
  • 13
    • 85013809817 scopus 로고    scopus 로고
    • Introducing EzBi-oCloud: a taxonomically United database of 16S rRNA gene sequences and whole-genome assemblies
    • Yoon S-H, Ha S-M, Kwon S, Lim J, Kim Y et al. Introducing EzBi-oCloud: a taxonomically United database of 16S rRNA gene sequences and whole-genome assemblies. Int J Syst Evol Microbiol 2017;67:1613–.
    • (2017) Int J Syst Evol Microbiol , vol.67 , pp. 1613
    • Yoon, S-H1    Ha, S-M2    Kwon, S3    Lim, J4    Kim, Y5
  • 14
    • 85022158148 scopus 로고    scopus 로고
    • MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets
    • Kumar S, Stecher G, Tamura K. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 2016;33:1870–1874.
    • (2016) Mol Biol Evol , vol.33 , pp. 1870-1874
    • Kumar, S1    Stecher, G2    Tamura, K.3
  • 15
    • 84893511241 scopus 로고    scopus 로고
    • Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
    • Kim M, Oh H-S, Park S-C, Chun J. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Microbiol 2014;64:346–351.
    • (2014) Int J Syst Evol Microbiol , vol.64 , pp. 346-351
    • Kim, M1    Oh, H-S2    Park, S-C3    Chun, J.4
  • 17
    • 0021971202 scopus 로고
    • Surface structures (peritrichous fibrils and tufts of fibrils) found on Streptococcus sanguis strains may be related to their ability to coaggregate with other oral genera
    • Handley PS, Carter PL, Wyatt JE, Hesketh LM. Surface structures (peritrichous fibrils and tufts of fibrils) found on Streptococcus sanguis strains may be related to their ability to coaggregate with other oral genera. Infect Immun 1985;47:217–227.
    • (1985) Infect Immun , vol.47 , pp. 217-227
    • Handley, PS1    Carter, PL2    Wyatt, JE3    Hesketh, LM.4
  • 18
    • 0026651935 scopus 로고
    • Rapid cytochemical demonstration of cytochrome oxidase activity in pathogenic bacteria
    • Barer MR, Marsh PJ. Rapid cytochemical demonstration of cytochrome oxidase activity in pathogenic bacteria. J Clin Pathol 1992;45:487–489.
    • (1992) J Clin Pathol , vol.45 , pp. 487-489
    • Barer, MR1    Marsh, PJ.2
  • 19
    • 6044265186 scopus 로고
    • The use of semi-solid agar for the detection of bacterial motility
    • Tittsler RP, Sandholzer LA. The use of semi-solid agar for the detection of bacterial motility. J Bacteriol 1936;31:575–.
    • (1936) J Bacteriol , vol.31 , pp. 575
    • Tittsler, RP1    Sandholzer, LA.2
  • 20
    • 84955563657 scopus 로고    scopus 로고
    • Pedobacter ardleyensis sp. nov., isolated from soil in Antarctica
    • Da X, Jiang F, Chang X, Ren L, Qiu X et al. Pedobacter ardleyensis sp. nov., isolated from soil in Antarctica. Int J Syst Evol Microbiol 2015;65:3841–3846.
    • (2015) Int J Syst Evol Microbiol , vol.65 , pp. 3841-3846
    • Da, X1    Jiang, F2    Chang, X3    Ren, L4    Qiu, X5
  • 21
    • 85047288810 scopus 로고    scopus 로고
    • Distinct mineral weathering behaviors of the novel mineral-weathering strains Rhizobium yantingense H66 and Rhizobium etli CFN42
    • Chen W, Luo L, He L-Y, Wang Q, Sheng X-F. Distinct mineral weathering behaviors of the novel mineral-weathering strains Rhizobium yantingense H66 and Rhizobium etli CFN42. Appl Environ Microbiol 2016;82:4090–4099.
    • (2016) Appl Environ Microbiol , vol.82 , pp. 4090-4099
    • Chen, W1    Luo, L2    He, L-Y3    Wang, Q4    Sheng, X-F.5
  • 22
    • 0021182575 scopus 로고
    • An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids
    • Minnikin DE, O'Donnell AG, Goodfellow M, Alderson G, Athalye M et al. An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 1984;2:233–241.
    • (1984) J Microbiol Methods , vol.2 , pp. 233-241
    • Minnikin, DE1    O'Donnell, AG2    Goodfellow, M3    Alderson, G4    Athalye, M5
  • 23
    • 0025324750 scopus 로고
    • A comparative study of the lipid composition of Halo-bacterium saccharovorum from various sources
    • Tindall BJ. A comparative study of the lipid composition of Halo-bacterium saccharovorum from various sources. Syst Appl Microbiol 1990;13:128–130.
    • (1990) Syst Appl Microbiol , vol.13 , pp. 128-130
    • Tindall, BJ.1
  • 24
    • 0001440003 scopus 로고
    • Separation of bacterial menaquinones by HPLC using reverse phase (RP18) and a silver loaded ion exchanger as stationary phases
    • Kroppenstedt RM. Separation of bacterial menaquinones by HPLC using reverse phase (RP18) and a silver loaded ion exchanger as stationary phases. J Liq Chromatogr 1982;5:2359–2367.
    • (1982) J Liq Chromatogr , vol.5 , pp. 2359-2367
    • Kroppenstedt, RM.1
  • 25
    • 0029799185 scopus 로고    scopus 로고
    • Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa
    • Kämpfer P, Kroppenstedt RM. Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 1996;42:989–1005.
    • (1996) Can J Microbiol , vol.42 , pp. 989-1005
    • Kämpfer, P1    Kroppenstedt, RM.2
  • 26
    • 67650711615 scopus 로고    scopus 로고
    • SOAP2: an improved ultrafast tool for short read alignment
    • Li R, Yu C, Li Y, Lam T-W, Yiu S-M et al. SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics 2009;25:1966–1967.
    • (2009) Bioinformatics , vol.25 , pp. 1966-1967
    • Li, R1    Yu, C2    Li, Y3    Lam, T-W4    Yiu, S-M5
  • 27
    • 84901417347 scopus 로고    scopus 로고
    • Prokka: rapid prokaryotic genome annotation
    • Seemann T. Prokka: rapid prokaryotic genome annotation. Bioin-formatics 2014;30:2068–2069.
    • (2014) Bioin-formatics , vol.30 , pp. 2068-2069
    • Seemann, T.1
  • 28
    • 84962177747 scopus 로고    scopus 로고
    • JSpe-ciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
    • Richter M, Rosselló-Móra R, Oliver Glöckner F, Peplies J. JSpe-ciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison. Bioinformatics 2016;32:929–931.
    • (2016) Bioinformatics , vol.32 , pp. 929-931
    • Richter, M1    Rosselló-Móra, R2    Oliver Glöckner, F3    Peplies, J.4
  • 29
    • 84874011652 scopus 로고    scopus 로고
    • Genome sequence-based species delimitation with confidence intervals and improved distance functions
    • Meier-Kolthoff JP, Auch AF, Klenk H-P, Göker M. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics 2013;14:60.
    • (2013) BMC Bioinformatics , vol.14 , pp. 60
    • Meier-Kolthoff, JP1    Auch, AF2    Klenk, H-P3    Göker, M.4
  • 30
    • 84969673075 scopus 로고    scopus 로고
    • BPGA-an ultra-fast pan-genome analysis pipeline
    • Chaudhari NM, Gupta VK, Dutta C. BPGA-an ultra-fast pan-genome analysis pipeline. Sci Rep 2016;6:24373.
    • (2016) Sci Rep , vol.6 , pp. 24373
    • Chaudhari, NM1    Gupta, VK2    Dutta, C.3
  • 31
    • 85092917769 scopus 로고    scopus 로고
    • Institute of Evolutionary Biology. University of Edinburgh. Figtree.
    • Institute of Evolutionary Biology. University of Edinburgh. Figtree.
  • 33
    • 84959528568 scopus 로고    scopus 로고
    • BlastKOALA and GhostKOALA: KEGG tools for functional characterization of genome and metage-nome sequences
    • Kanehisa M, Sato Y, Morishima K. BlastKOALA and GhostKOALA: KEGG tools for functional characterization of genome and metage-nome sequences. J Mol Biol 2016;428:726–731.
    • (2016) J Mol Biol , vol.428 , pp. 726-731
    • Kanehisa, M1    Sato, Y2    Morishima, K.3
  • 34
    • 85050882041 scopus 로고    scopus 로고
    • iPath3.0: interactive pathways explorer V3
    • Darzi Y, Letunic I, Bork P, Yamada T. iPath3.0: interactive pathways explorer V3. Nucleic Acids Res 2018;46:W510–W513.
    • (2018) Nucleic Acids Res , vol.46 , pp. W510-W513
    • Darzi, Y1    Letunic, I2    Bork, P3    Yamada, T.4
  • 35
    • 85018266757 scopus 로고    scopus 로고
    • Enzyme Annotation and Metabolic Reconstruction Using KEGG
    • New York, NY: Humana Press
    • Kanehisa M. Enzyme Annotation and Metabolic Reconstruction Using KEGG. In Protein Function Prediction. New York, NY: Humana Press; 2017. pp. 135–145.
    • (2017) Protein Function Prediction , pp. 135-145
    • Kanehisa, M.1
  • 38
  • 39
    • 84945458389 scopus 로고    scopus 로고
    • Improving flavor metabolism of Saccharomyces cerevisiae by mixed culture with Bacillus licheniformis for Chinese Maotai-flavor liquor making
    • Meng X, Wu Q, Wang L, Wang D, Chen L et al. Improving flavor metabolism of Saccharomyces cerevisiae by mixed culture with Bacillus licheniformis for Chinese Maotai-flavor liquor making. J Ind Microbiol Biotechnol 2015;42:1601–1608.
    • (2015) J Ind Microbiol Biotechnol , vol.42 , pp. 1601-1608
    • Meng, X1    Wu, Q2    Wang, L3    Wang, D4    Chen, L5
  • 40
    • 84904438305 scopus 로고    scopus 로고
    • Generation of acetoin and its derivatives in foods
    • Xiao Z, Lu JR. Generation of acetoin and its derivatives in foods. J Agric Food Chem 2014;62:6487–6497.
    • (2014) J Agric Food Chem , vol.62 , pp. 6487-6497
    • Xiao, Z1    Lu, JR.2
  • 41
    • 70349759561 scopus 로고    scopus 로고
    • Biotechnological production of 2,3-butanediol—current state and prospects
    • Celińska E, Grajek W. Biotechnological production of 2,3-butanediol—current state and prospects. Biotechnol Adv 2009;27:715–725.
    • (2009) Biotechnol Adv , vol.27 , pp. 715-725
    • Celińska, E1    Grajek, W.2
  • 42
    • 85085629596 scopus 로고    scopus 로고
    • Lactobacillus suantsaicola sp. nov. and Lactobacillus suantsaiihabitans sp. nov., isolated from suan-tsai, a traditional fermented mustard green product of Taiwan
    • press
    • Lin S-T, Wang L-T, Wang H-M, Tamura T, Mori K et al. Lactobacillus suantsaicola sp. nov. and Lactobacillus suantsaiihabitans sp. nov., isolated from suan-tsai, a traditional fermented mustard green product of Taiwan. Int J Syst Evol Microbiol 2019:in press.
    • (2019) Int J Syst Evol Microbiol
    • Lin, S-T1    Wang, L-T2    Wang, H-M3    Tamura, T4    Mori, K5


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