메뉴 건너뛰기




Volumn 66, Issue 51, 2018, Pages 13444-13453

Combinatorial Optimization of Resveratrol Production in Engineered E. coli

Author keywords

combinatorial optimization; Escherichia coli; intracellular environment; metabolic engineering; resveratrol; synthetic biology

Indexed keywords

ADDITIVES; AMINO ACIDS; BIOCHEMISTRY; BIOSYNTHESIS; COMBINATORIAL OPTIMIZATION; ESCHERICHIA COLI; GENE EXPRESSION; METABOLIC ENGINEERING; PLANTS (BOTANY); POLYPHENOLIC COMPOUNDS;

EID: 85058529198     PISSN: 00218561     EISSN: 15205118     Source Type: Journal    
DOI: 10.1021/acs.jafc.8b05014     Document Type: Article
Times cited : (43)

References (46)
  • 2
    • 84965151035 scopus 로고    scopus 로고
    • Resveratrol and Cardiovascular Diseases
    • Bonnefont-Rousselot, D. Resveratrol and Cardiovascular Diseases. Nutrients 2016, 8, 250, 10.3390/nu8050250
    • (2016) Nutrients , vol.8 , pp. 250
    • Bonnefont-Rousselot, D.1
  • 3
    • 79961047423 scopus 로고    scopus 로고
    • Resveratrol and health- A comprehensive review of human clinical trials
    • Smoliga, J. M.; Baur, J. A.; Hausenblas, H. A. Resveratrol and health-a comprehensive review of human clinical trials. Mol. Nutr. Food Res. 2011, 55, 1129-1141, 10.1002/mnfr.201100143
    • (2011) Mol. Nutr. Food Res. , vol.55 , pp. 1129-1141
    • Smoliga, J.M.1    Baur, J.A.2    Hausenblas, H.A.3
  • 6
    • 34249750383 scopus 로고    scopus 로고
    • Evidence for a Trade-Off between survival and fitness caused by resveratrol treatment of Caenorhabditis elegans
    • Gruber, J. A. N.; Tang, S. Y.; Halliwell, B. H. Evidence for a Trade-Off between survival and fitness caused by resveratrol treatment of Caenorhabditis elegans. Ann. N. Y. Acad. Sci. 2007, 1100, 530-542, 10.1196/annals.1395.059
    • (2007) Ann. N. Y. Acad. Sci. , vol.1100 , pp. 530-542
    • Gruber, J.A.N.1    Tang, S.Y.2    Halliwell, B.H.3
  • 8
    • 33645779318 scopus 로고    scopus 로고
    • Biosynthesis of plant-specific stilbene polyketides in metabolically engineered Escherichia coli
    • Watts, K.; Lee, P.; Schmidt, D. C. Biosynthesis of plant-specific stilbene polyketides in metabolically engineered Escherichia coli. BMC Biotechnol. 2006, 6, 1-12, 10.1186/1472-6750-6-22
    • (2006) BMC Biotechnol. , vol.6 , pp. 1-12
    • Watts, K.1    Lee, P.2    Schmidt, D.C.3
  • 10
    • 35748972666 scopus 로고    scopus 로고
    • Precursor-directed biosynthesis of stilbene methyl ethers in Escherichia coli
    • Katsuyama, Y.; Funa, N.; Horinouchi, S. Precursor-directed biosynthesis of stilbene methyl ethers in Escherichia coli. Biotechnol. J. 2007, 2, 1286-1293, 10.1002/biot.200700098
    • (2007) Biotechnol. J. , vol.2 , pp. 1286-1293
    • Katsuyama, Y.1    Funa, N.2    Horinouchi, S.3
  • 11
    • 81055140628 scopus 로고    scopus 로고
    • Biosynthesis of plant-specific phenylpropanoids by construction of an artificial biosynthetic pathway in Escherichia coli
    • Choi, O.; Wu, C. Z.; Kang, S. Y.; Ahn, J. S.; Uhm, T. B.; Hong, Y. S. Biosynthesis of plant-specific phenylpropanoids by construction of an artificial biosynthetic pathway in Escherichia coli. J. Ind. Microbiol. Biotechnol. 2011, 38 (10), 1657-1665, 10.1007/s10295-011-0954-3
    • (2011) J. Ind. Microbiol. Biotechnol. , vol.38 , Issue.10 , pp. 1657-1665
    • Choi, O.1    Wu, C.Z.2    Kang, S.Y.3    Ahn, J.S.4    Uhm, T.B.5    Hong, Y.S.6
  • 13
    • 84892182768 scopus 로고    scopus 로고
    • Fatty acid synthesis in Escherichia coli and its applications towards the production of fatty acid based biofuels
    • Janβen, H. J.; Steinbüchel, A. Fatty acid synthesis in Escherichia coli and its applications towards the production of fatty acid based biofuels. Biotechnol. Biofuels 2014, 7, 7, 10.1186/1754-6834-7-7
    • (2014) Biotechnol. Biofuels , vol.7 , pp. 7
    • Janßen, H.J.1    Steinbüchel, A.2
  • 14
    • 34250304606 scopus 로고    scopus 로고
    • Synthesis of unnatural flavonoids and stilbenes by exploiting the plant biosynthetic pathway in Escherichia coli
    • Katsuyama, Y.; Funa, N.; Miyahisa, I.; Horinouchi, S. Synthesis of unnatural flavonoids and stilbenes by exploiting the plant biosynthetic pathway in Escherichia coli. Chem. Biol. 2007, 14, 613-621, 10.1016/j.chembiol.2007.05.004
    • (2007) Chem. Biol. , vol.14 , pp. 613-621
    • Katsuyama, Y.1    Funa, N.2    Miyahisa, I.3    Horinouchi, S.4
  • 15
    • 84883232076 scopus 로고    scopus 로고
    • Multivariate modular metabolic engineering of Escherichia coli to produce resveratrol from L-tyrosine
    • Wu, J.; Liu, P.; Fan, Y.; Bao, H.; Du, G.; Zhou, J.; Chen, J. Multivariate modular metabolic engineering of Escherichia coli to produce resveratrol from L-tyrosine. J. Biotechnol. 2013, 167, 404-411, 10.1016/j.jbiotec.2013.07.030
    • (2013) J. Biotechnol. , vol.167 , pp. 404-411
    • Wu, J.1    Liu, P.2    Fan, Y.3    Bao, H.4    Du, G.5    Zhou, J.6    Chen, J.7
  • 16
    • 84928159353 scopus 로고    scopus 로고
    • Regulating malonyl-CoA metabolism via synthetic antisense RNAs for enhanced biosynthesis of natural products
    • Yang, Y.; Lin, Y.; Li, L.; Linhardt, R. J.; Yan, Y. Regulating malonyl-CoA metabolism via synthetic antisense RNAs for enhanced biosynthesis of natural products. Metab. Eng. 2015, 29, 217-226, 10.1016/j.ymben.2015.03.018
    • (2015) Metab. Eng. , vol.29 , pp. 217-226
    • Yang, Y.1    Lin, Y.2    Li, L.3    Linhardt, R.J.4    Yan, Y.5
  • 17
    • 85015798130 scopus 로고    scopus 로고
    • Efficient de novo synthesis of resveratrol by metabolically engineered Escherichia coli
    • Wu, J.; Zhou, P.; Zhang, X.; Dong, M. Efficient de novo synthesis of resveratrol by metabolically engineered Escherichia coli. J. Ind. Microbiol. Biotechnol. 2017, 44, 1-13, 10.1007/s10295-017-1937-9
    • (2017) J. Ind. Microbiol. Biotechnol. , vol.44 , pp. 1-13
    • Wu, J.1    Zhou, P.2    Zhang, X.3    Dong, M.4
  • 18
    • 84879190343 scopus 로고    scopus 로고
    • Redirecting carbon flux into malonyl-CoA to improve resveratrol titers: Proof of concept for genetic interventions predicted by OptForce computational framework
    • Bhan, N.; Xu, P.; Khalidi, O.; Koffas, M. A. G. Redirecting carbon flux into malonyl-CoA to improve resveratrol titers: proof of concept for genetic interventions predicted by OptForce computational framework. Chem. Eng. Sci. 2013, 103, 109-114, 10.1016/j.ces.2012.10.009
    • (2013) Chem. Eng. Sci. , vol.103 , pp. 109-114
    • Bhan, N.1    Xu, P.2    Khalidi, O.3    Koffas, M.A.G.4
  • 19
    • 8344256552 scopus 로고    scopus 로고
    • Recombinant protein folding and misfolding in Escherichia coli
    • Baneyx, F.; Mujacic, M. Recombinant protein folding and misfolding in Escherichia coli. Nat. Biotechnol. 2004, 22, 1399-1408, 10.1038/nbt1029
    • (2004) Nat. Biotechnol. , vol.22 , pp. 1399-1408
    • Baneyx, F.1    Mujacic, M.2
  • 20
    • 63649137435 scopus 로고    scopus 로고
    • Improving cellular malonyl-CoA level in Escherichia coli via metabolic engineering
    • Zha, W.; Rubin-Pitel, S. B.; Shao, Z.; Zhao, H. Improving cellular malonyl-CoA level in Escherichia coli via metabolic engineering. Metab. Eng. 2009, 11, 192-198, 10.1016/j.ymben.2009.01.005
    • (2009) Metab. Eng. , vol.11 , pp. 192-198
    • Zha, W.1    Rubin-Pitel, S.B.2    Shao, Z.3    Zhao, H.4
  • 21
    • 84873596341 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs
    • Na, D.; Yoo, S. M.; Chung, H.; Park, H. J.; Lee, S. Y. Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs. Nat. Biotechnol. 2013, 31, 170-174, 10.1038/nbt.2461
    • (2013) Nat. Biotechnol. , vol.31 , pp. 170-174
    • Na, D.1    Yoo, S.M.2    Chung, H.3    Park, H.J.4    Lee, S.Y.5
  • 22
    • 85019385277 scopus 로고    scopus 로고
    • Chromosome engineering of Escherichia coli for constitutive production of salvianic acid A
    • Zhou, L.; Ding, Q.; Jiang, G. Z.; Liu, Z. N.; Wang, H. Y.; Zhao, G. R. Chromosome engineering of Escherichia coli for constitutive production of salvianic acid A. Microb. Cell Fact. 2017, 16, 84, 10.1186/s12934-017-0700-2
    • (2017) Microb. Cell Fact. , vol.16 , pp. 84
    • Zhou, L.1    Ding, Q.2    Jiang, G.Z.3    Liu, Z.N.4    Wang, H.Y.5    Zhao, G.R.6
  • 23
    • 79958715193 scopus 로고    scopus 로고
    • Optimization of a heterologous pathway for the production of flavonoids from glucose
    • Santos, C. N.; Koffas, M.; Stephanopoulos, G. Optimization of a heterologous pathway for the production of flavonoids from glucose. Metab. Eng. 2011, 13, 392-400, 10.1016/j.ymben.2011.02.002
    • (2011) Metab. Eng. , vol.13 , pp. 392-400
    • Santos, C.N.1    Koffas, M.2    Stephanopoulos, G.3
  • 24
    • 84958250665 scopus 로고    scopus 로고
    • Experimental and computational optimization of an Escherichia coli co-culture for the efficient production of flavonoids
    • Jones, J. A.; Vernacchio, V. R.; Sinkoe, A. L.; Collins, S. M.; Ibrahim, M. H. A.; Lachance, D. M.; Hahn, J.; Koffas, M. A. G. Experimental and computational optimization of an Escherichia coli co-culture for the efficient production of flavonoids. Metab. Eng. 2016, 35, 55-63, 10.1016/j.ymben.2016.01.006
    • (2016) Metab. Eng. , vol.35 , pp. 55-63
    • Jones, J.A.1    Vernacchio, V.R.2    Sinkoe, A.L.3    Collins, S.M.4    Ibrahim, M.H.A.5    Lachance, D.M.6    Hahn, J.7    Koffas, M.A.G.8
  • 26
    • 85044329955 scopus 로고    scopus 로고
    • Toward engineering E. Coli with an autoregulatory system for lignin valorization
    • Wu, W.; Liu, F.; Singh, S. Toward engineering E. coli with an autoregulatory system for lignin valorization. Proc. Natl. Acad. Sci. U. S. A. 2018, 115, 2970-2975, 10.1073/pnas.1720129115
    • (2018) Proc. Natl. Acad. Sci. U. S. A. , vol.115 , pp. 2970-2975
    • Wu, W.1    Liu, F.2    Singh, S.3
  • 27
    • 84883618380 scopus 로고    scopus 로고
    • Novel fermentation processes for manufacturing plant natural products
    • Zhou, J.; Du, G.; Chen, J. Novel fermentation processes for manufacturing plant natural products. Curr. Opin. Biotechnol. 2014, 25, 17-23, 10.1016/j.copbio.2013.08.009
    • (2014) Curr. Opin. Biotechnol. , vol.25 , pp. 17-23
    • Zhou, J.1    Du, G.2    Chen, J.3
  • 28
    • 84869122829 scopus 로고    scopus 로고
    • Engineering Escherichia coli to synthesize free fatty acids
    • Lennen, R. M.; Pfleger, B. F. Engineering Escherichia coli to synthesize free fatty acids. Trends Biotechnol. 2012, 30, 659-667, 10.1016/j.tibtech.2012.09.006
    • (2012) Trends Biotechnol. , vol.30 , pp. 659-667
    • Lennen, R.M.1    Pfleger, B.F.2
  • 29
    • 27644520003 scopus 로고    scopus 로고
    • Efficient production of (2S)-flavanones by Escherichia coli containing an artificial biosynthetic gene cluster
    • Miyahisa, I.; Kaneko, M.; Funa, N.; Kawasaki, H.; Kojima, H.; Ohnishi, Y.; Horinouchi, S. Efficient production of (2S)-flavanones by Escherichia coli containing an artificial biosynthetic gene cluster. Appl. Microbiol. Biotechnol. 2005, 68, 498-504, 10.1007/s00253-005-1916-3
    • (2005) Appl. Microbiol. Biotechnol. , vol.68 , pp. 498-504
    • Miyahisa, I.1    Kaneko, M.2    Funa, N.3    Kawasaki, H.4    Kojima, H.5    Ohnishi, Y.6    Horinouchi, S.7
  • 30
    • 40849126437 scopus 로고    scopus 로고
    • Antibacterial properties of Polygonum cuspidatum roots and their major bioactive constituents
    • Shan, B.; Cai, Y. Z.; Brooks, J. D.; Corke, H. Antibacterial properties of Polygonum cuspidatum roots and their major bioactive constituents. Food Chem. 2008, 109, 530-537, 10.1016/j.foodchem.2007.12.064
    • (2008) Food Chem. , vol.109 , pp. 530-537
    • Shan, B.1    Cai, Y.Z.2    Brooks, J.D.3    Corke, H.4
  • 31
    • 84861440312 scopus 로고    scopus 로고
    • Systems metabolic engineering of microorganisms for natural and non-natural chemicals
    • Lee, J. W.; Na, D.; Park, J. M.; Lee, J.; Choi, S.; Lee, S. Y. Systems metabolic engineering of microorganisms for natural and non-natural chemicals. Nat. Chem. Biol. 2012, 8, 536-546, 10.1038/nchembio.970
    • (2012) Nat. Chem. Biol. , vol.8 , pp. 536-546
    • Lee, J.W.1    Na, D.2    Park, J.M.3    Lee, J.4    Choi, S.5    Lee, S.Y.6
  • 32
    • 0031734033 scopus 로고    scopus 로고
    • The Escherichia coli cmlA gene encodes the multidrug efflux pump Cmr/MdfA and is responsible for isopropyl-β-D-thiogalactopyranoside exclusion and spectinomycin sensitivity
    • Bohn, C.; Bouloc, P. The Escherichia coli cmlA gene encodes the multidrug efflux pump Cmr/MdfA and is responsible for isopropyl-β-D-thiogalactopyranoside exclusion and spectinomycin sensitivity. J. Bacteriol. 1998, 180, 6072-6075
    • (1998) J. Bacteriol. , vol.180 , pp. 6072-6075
    • Bohn, C.1    Bouloc, P.2
  • 33
    • 33646445156 scopus 로고    scopus 로고
    • Structure of the multidrug transporter EmrD from Escherichia coli
    • Yin, Y.; He, X.; Szewczyk, P.; Nguyen, T.; Chang, G. Structure of the multidrug transporter EmrD from Escherichia coli. Science 2006, 312, 741-774, 10.1126/science.1125629
    • (2006) Science , vol.312 , pp. 741-774
    • Yin, Y.1    He, X.2    Szewczyk, P.3    Nguyen, T.4    Chang, G.5
  • 34
    • 0028986717 scopus 로고
    • EmrE, an Escherichia coli 12-kDa multidrug transporter, exchanges toxic cations and H+ and is soluble in organic solvents
    • Yerushalmi, H.; Lebendiker, M.; Schuldiner, S. EmrE, an Escherichia coli 12-kDa multidrug transporter, exchanges toxic cations and H+ and is soluble in organic solvents. J. Biol. Chem. 1995, 270, 6856-6863, 10.1074/jbc.270.12.6856
    • (1995) J. Biol. Chem. , vol.270 , pp. 6856-6863
    • Yerushalmi, H.1    Lebendiker, M.2    Schuldiner, S.3
  • 35
    • 3542998054 scopus 로고    scopus 로고
    • AcrA, AcrB, and TolC of Escherichia coli form a stable intermembrane multidrug efflux complex
    • Tikhonova, E. B.; Zgurskaya, H. I. AcrA, AcrB, and TolC of Escherichia coli form a stable intermembrane multidrug efflux complex. J. Biol. Chem. 2004, 279, 32116-32124, 10.1074/jbc.M402230200
    • (2004) J. Biol. Chem. , vol.279 , pp. 32116-32124
    • Tikhonova, E.B.1    Zgurskaya, H.I.2
  • 36
    • 0036897619 scopus 로고    scopus 로고
    • Regulation of bacterial drug export systems
    • Grkovic, S.; Brown, M. H.; Skurray, R. A. Regulation of bacterial drug export systems. Microbiol. Mol. Biol. Rev. 2002, 66, 671-701, 10.1128/MMBR.66.4.671-701.2002
    • (2002) Microbiol. Mol. Biol. Rev. , vol.66 , pp. 671-701
    • Grkovic, S.1    Brown, M.H.2    Skurray, R.A.3
  • 37
    • 80052033347 scopus 로고    scopus 로고
    • Stepwise increase of resveratrol biosynthesis in yeast Saccharomyces cerevisiae by metabolic engineering
    • Wang, Y.; Halls, C.; Zhang, J.; Matsuno, M.; Zhang, Y.; Yu, O. Stepwise increase of resveratrol biosynthesis in yeast Saccharomyces cerevisiae by metabolic engineering. Metab. Eng. 2011, 13, 455-463, 10.1016/j.ymben.2011.04.005
    • (2011) Metab. Eng. , vol.13 , pp. 455-463
    • Wang, Y.1    Halls, C.2    Zhang, J.3    Matsuno, M.4    Zhang, Y.5    Yu, O.6
  • 38
    • 84907984616 scopus 로고    scopus 로고
    • Identification of membrane proteins associated with phenylpropanoid tolerance and transport in Escherichia coli BL21
    • Zhou, J.; Wang, K.; Xu, S.; Wu, J.; Liu, P.; Du, G.; Li, J.; Chen, J. Identification of membrane proteins associated with phenylpropanoid tolerance and transport in Escherichia coli BL21. J. Proteomics 2015, 113, 15-28, 10.1016/j.jprot.2014.09.012
    • (2015) J. Proteomics , vol.113 , pp. 15-28
    • Zhou, J.1    Wang, K.2    Xu, S.3    Wu, J.4    Liu, P.5    Du, G.6    Li, J.7    Chen, J.8
  • 39
    • 0037040541 scopus 로고    scopus 로고
    • Molecular chaperones in the cytosol: From nascent chain to folded protein
    • Hartl, F. U.; Hayer-Hartl, M. Molecular chaperones in the cytosol: from nascent chain to folded protein. Science 2002, 295, 1852-1858, 10.1126/science.1068408
    • (2002) Science , vol.295 , pp. 1852-1858
    • Hartl, F.U.1    Hayer-Hartl, M.2
  • 40
    • 67650660144 scopus 로고    scopus 로고
    • Increased malonyl coenzyme A biosynthesis by tuning the Escherichia coli metabolic network and its application to flavanone production
    • Fowler, Z. L.; Gikandi, W. W.; Koffas, M. A. G. Increased malonyl coenzyme A biosynthesis by tuning the Escherichia coli metabolic network and its application to flavanone production. Appl. Environ. Microbiol. 2009, 75, 5831-5839, 10.1128/AEM.00270-09
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 5831-5839
    • Fowler, Z.L.1    Gikandi, W.W.2    Koffas, M.A.G.3
  • 41
    • 80052021573 scopus 로고    scopus 로고
    • Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA
    • Xu, P.; Ranganathan, S.; Fowler, Z. L.; Maranas, C. D.; Koffas, M. A. G. Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA. Metab. Eng. 2011, 13, 578-587, 10.1016/j.ymben.2011.06.008
    • (2011) Metab. Eng. , vol.13 , pp. 578-587
    • Xu, P.1    Ranganathan, S.2    Fowler, Z.L.3    Maranas, C.D.4    Koffas, M.A.G.5
  • 44
    • 84865281539 scopus 로고    scopus 로고
    • Rational, combinatorial, and genomic approaches for engineering L-tyrosine production in Escherichia coli
    • Santos, C. N. S.; Xiao, W.; Stephanopoulos, G. Rational, combinatorial, and genomic approaches for engineering L-tyrosine production in Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 2012, 109, 13538-13543, 10.1073/pnas.1206346109
    • (2012) Proc. Natl. Acad. Sci. U. S. A. , vol.109 , pp. 13538-13543
    • Santos, C.N.S.1    Xiao, W.2    Stephanopoulos, G.3
  • 45
    • 84964378468 scopus 로고    scopus 로고
    • De novo biosynthesis of resveratrol by site-specific integration of heterologous genes in Escherichia coli
    • Liu, X.; Lin, J.; Hu, H.; Zhou, B.; Zhu, B. De novo biosynthesis of resveratrol by site-specific integration of heterologous genes in Escherichia coli. FEMS Microbiol. Lett. 2016, 363, 363, 10.1093/femsle/fnw061
    • (2016) FEMS Microbiol. Lett. , vol.363 , pp. 363
    • Liu, X.1    Lin, J.2    Hu, H.3    Zhou, B.4    Zhu, B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.