-
1
-
-
3142743111
-
Neonatal adaptive immunity comes of age
-
Adkins, B., Leclerc, C., Marshall-Clarke, S., Neonatal adaptive immunity comes of age. Nat. Rev. Immunol. 4 (2004), 553–564.
-
(2004)
Nat. Rev. Immunol.
, vol.4
, pp. 553-564
-
-
Adkins, B.1
Leclerc, C.2
Marshall-Clarke, S.3
-
2
-
-
84928987900
-
HTSeq–a Python framework to work with high-throughput sequencing data
-
Anders, S., Pyl, P.T., Huber, W., HTSeq–a Python framework to work with high-throughput sequencing data. Bioinformatics 31 (2015), 166–169.
-
(2015)
Bioinformatics
, vol.31
, pp. 166-169
-
-
Anders, S.1
Pyl, P.T.2
Huber, W.3
-
3
-
-
84940380928
-
A distinct function of regulatory T cells in tissue protection
-
Arpaia, N., Green, J.A., Moltedo, B., Arvey, A., Hemmers, S., Yuan, S., Treuting, P.M., Rudensky, A.Y., A distinct function of regulatory T cells in tissue protection. Cell 162 (2015), 1078–1089.
-
(2015)
Cell
, vol.162
, pp. 1078-1089
-
-
Arpaia, N.1
Green, J.A.2
Moltedo, B.3
Arvey, A.4
Hemmers, S.5
Yuan, S.6
Treuting, P.M.7
Rudensky, A.Y.8
-
4
-
-
84943645306
-
Fitting linear mixed-effects models using lme4
-
Bates, D., Mächler, M., Bolker, B., Walker, S., Fitting linear mixed-effects models using lme4. J. Statistical Software 67 (2015), 1–48.
-
(2015)
J. Statistical Software
, vol.67
, pp. 1-48
-
-
Bates, D.1
Mächler, M.2
Bolker, B.3
Walker, S.4
-
5
-
-
28944434329
-
Influenza-associated deaths among children in the United States, 2003-2004
-
Bhat, N., Wright, J.G., Broder, K.R., Murray, E.L., Greenberg, M.E., Glover, M.J., Likos, A.M., Posey, D.L., Klimov, A., Lindstrom, S.E., et al., Influenza Special Investigations Team. Influenza-associated deaths among children in the United States, 2003-2004. N. Engl. J. Med. 353 (2005), 2559–2567.
-
(2005)
N. Engl. J. Med.
, vol.353
, pp. 2559-2567
-
-
Bhat, N.1
Wright, J.G.2
Broder, K.R.3
Murray, E.L.4
Greenberg, M.E.5
Glover, M.J.6
Likos, A.M.7
Posey, D.L.8
Klimov, A.9
Lindstrom, S.E.10
-
6
-
-
58149288679
-
CD8 T cells utilize TRAIL to control influenza virus infection
-
Brincks, E.L., Katewa, A., Kucaba, T.A., Griffith, T.S., Legge, K.L., CD8 T cells utilize TRAIL to control influenza virus infection. J. Immunol. 181 (2008), 4918–4925.
-
(2008)
J. Immunol.
, vol.181
, pp. 4918-4925
-
-
Brincks, E.L.1
Katewa, A.2
Kucaba, T.A.3
Griffith, T.S.4
Legge, K.L.5
-
7
-
-
0036582288
-
Gammadelta T cells: functional plasticity and heterogeneity
-
Carding, S.R., Egan, P.J., Gammadelta T cells: functional plasticity and heterogeneity. Nat. Rev. Immunol. 2 (2002), 336–345.
-
(2002)
Nat. Rev. Immunol.
, vol.2
, pp. 336-345
-
-
Carding, S.R.1
Egan, P.J.2
-
8
-
-
0033571730
-
Naive, effector, and memory CD8 T cells in protection against pulmonary influenza virus infection: homing properties rather than initial frequencies are crucial
-
Cerwenka, A., Morgan, T.M., Dutton, R.W., Naive, effector, and memory CD8 T cells in protection against pulmonary influenza virus infection: homing properties rather than initial frequencies are crucial. J. Immunol. 163 (1999), 5535–5543.
-
(1999)
J. Immunol.
, vol.163
, pp. 5535-5543
-
-
Cerwenka, A.1
Morgan, T.M.2
Dutton, R.W.3
-
9
-
-
79959380307
-
Innate lymphoid cells mediate influenza-induced airway hyper-reactivity independently of adaptive immunity
-
Chang, Y.-J., Kim, H.Y., Albacker, L.A., Baumgarth, N., McKenzie, A.N.J., Smith, D.E., Dekruyff, R.H., Umetsu, D.T., Innate lymphoid cells mediate influenza-induced airway hyper-reactivity independently of adaptive immunity. Nat. Immunol. 12 (2011), 631–638.
-
(2011)
Nat. Immunol.
, vol.12
, pp. 631-638
-
-
Chang, Y.-J.1
Kim, H.Y.2
Albacker, L.A.3
Baumgarth, N.4
McKenzie, A.N.J.5
Smith, D.E.6
Dekruyff, R.H.7
Umetsu, D.T.8
-
10
-
-
84863516785
-
Role of gamma-delta T cells in host response against Staphylococcus aureus-induced pneumonia
-
Cheng, P., Liu, T., Zhou, W.-Y., Zhuang, Y., Peng, L.-S., Zhang, J.-Y., Yin, Z.-N., Mao, X.-H., Guo, G., Shi, Y., Zou, Q.M., Role of gamma-delta T cells in host response against Staphylococcus aureus-induced pneumonia. BMC Immunol., 13, 2012, 38.
-
(2012)
BMC Immunol.
, vol.13
, pp. 38
-
-
Cheng, P.1
Liu, T.2
Zhou, W.-Y.3
Zhuang, Y.4
Peng, L.-S.5
Zhang, J.-Y.6
Yin, Z.-N.7
Mao, X.-H.8
Guo, G.9
Shi, Y.10
Zou, Q.M.11
-
11
-
-
84896966923
-
γδ T cells: first line of defense and beyond
-
Chien, Y.-H., Meyer, C., Bonneville, M., γδ T cells: first line of defense and beyond. Annu. Rev. Immunol. 32 (2014), 121–155.
-
(2014)
Annu. Rev. Immunol.
, vol.32
, pp. 121-155
-
-
Chien, Y.-H.1
Meyer, C.2
Bonneville, M.3
-
12
-
-
84866145898
-
Cytomegalovirus infection impairs immune responses and accentuates T-cell pool changes observed in mice with aging
-
Cicin-Sain, L., Brien, J.D., Uhrlaub, J.L., Drabig, A., Marandu, T.F., Nikolich-Zugich, J., Cytomegalovirus infection impairs immune responses and accentuates T-cell pool changes observed in mice with aging. PLoS Pathog., 8, 2012, e1002849.
-
(2012)
PLoS Pathog.
, vol.8
, pp. e1002849
-
-
Cicin-Sain, L.1
Brien, J.D.2
Uhrlaub, J.L.3
Drabig, A.4
Marandu, T.F.5
Nikolich-Zugich, J.6
-
13
-
-
0027849290
-
A remark on algorithm 643: FEXACT: an algorithm for performing Fisher's exact test in r x c contingency tables
-
Clarkson, D.B., Fan, Y.-A., Joe, H., A remark on algorithm 643: FEXACT: an algorithm for performing Fisher's exact test in r x c contingency tables. ACM Trans. Math. Softw. 19 (1993), 484–488.
-
(1993)
ACM Trans. Math. Softw.
, vol.19
, pp. 484-488
-
-
Clarkson, D.B.1
Fan, Y.-A.2
Joe, H.3
-
14
-
-
84926473508
-
IL-17-producing γδ T cells and neutrophils conspire to promote breast cancer metastasis
-
Coffelt, S.B., Kersten, K., Doornebal, C.W., Weiden, J., Vrijland, K., Hau, C.-S., Verstegen, N.J.M., Ciampricotti, M., Hawinkels, L.J.A.C., Jonkers, J., de Visser, K.E., IL-17-producing γδ T cells and neutrophils conspire to promote breast cancer metastasis. Nature 522 (2015), 345–348.
-
(2015)
Nature
, vol.522
, pp. 345-348
-
-
Coffelt, S.B.1
Kersten, K.2
Doornebal, C.W.3
Weiden, J.4
Vrijland, K.5
Hau, C.-S.6
Verstegen, N.J.M.7
Ciampricotti, M.8
Hawinkels, L.J.A.C.9
Jonkers, J.10
de Visser, K.E.11
-
15
-
-
75949114864
-
Critical role of IL-17RA in immunopathology of influenza infection
-
Crowe, C.R., Chen, K., Pociask, D.A., Alcorn, J.F., Krivich, C., Enelow, R.I., Ross, T.M., Witztum, J.L., Kolls, J.K., Critical role of IL-17RA in immunopathology of influenza infection. J. Immunol. 183 (2009), 5301–5310.
-
(2009)
J. Immunol.
, vol.183
, pp. 5301-5310
-
-
Crowe, C.R.1
Chen, K.2
Pociask, D.A.3
Alcorn, J.F.4
Krivich, C.5
Enelow, R.I.6
Ross, T.M.7
Witztum, J.L.8
Kolls, J.K.9
-
16
-
-
84921782435
-
Host detection and the stealthy phenotype in influenza virus infection
-
M.B.A. Oldstone R.W. Compans Springer International Publishing
-
Dash, P., Thomas, P.G., Host detection and the stealthy phenotype in influenza virus infection. Influenza Pathogenesis and Control Oldstone, M.B.A., Compans, R.W., (eds.), Volume II, 2014, Springer International Publishing, 121–147.
-
(2014)
Influenza Pathogenesis and Control
, vol.Volume II
, pp. 121-147
-
-
Dash, P.1
Thomas, P.G.2
-
17
-
-
78650937547
-
Paired analysis of TCRα and TCRβ chains at the single-cell level in mice
-
Dash, P., McClaren, J.L., Oguin, T.H. 3rd, Rothwell, W., Todd, B., Morris, M.Y., Becksfort, J., Reynolds, C., Brown, S.A., Doherty, P.C., Thomas, P.G., Paired analysis of TCRα and TCRβ chains at the single-cell level in mice. J. Clin. Invest. 121 (2011), 288–295.
-
(2011)
J. Clin. Invest.
, vol.121
, pp. 288-295
-
-
Dash, P.1
McClaren, J.L.2
Oguin, T.H.3
Rothwell, W.4
Todd, B.5
Morris, M.Y.6
Becksfort, J.7
Reynolds, C.8
Brown, S.A.9
Doherty, P.C.10
Thomas, P.G.11
-
18
-
-
84942858518
-
Single-cell analysis of T-cell receptor αβ repertoire
-
Dash, P., Wang, G.C., Thomas, P.G., Single-cell analysis of T-cell receptor αβ repertoire. Methods Mol. Biol. 1343 (2015), 181–197.
-
(2015)
Methods Mol. Biol.
, vol.1343
, pp. 181-197
-
-
Dash, P.1
Wang, G.C.2
Thomas, P.G.3
-
19
-
-
85006802684
-
Perinatal activation of the interleukin-33 pathway promotes type 2 immunity in the developing lung
-
de Kleer, I.M., Kool, M., de Bruijn, M.J.W., Willart, M., van Moorleghem, J., Schuijs, M.J., Plantinga, M., Beyaert, R., Hams, E., Fallon, P.G., et al. Perinatal activation of the interleukin-33 pathway promotes type 2 immunity in the developing lung. Immunity 45 (2016), 1285–1298.
-
(2016)
Immunity
, vol.45
, pp. 1285-1298
-
-
de Kleer, I.M.1
Kool, M.2
de Bruijn, M.J.W.3
Willart, M.4
van Moorleghem, J.5
Schuijs, M.J.6
Plantinga, M.7
Beyaert, R.8
Hams, E.9
Fallon, P.G.10
-
20
-
-
84871809302
-
STAR: ultrafast universal RNA-seq aligner
-
Dobin, A., Davis, C.A., Schlesinger, F., Drenkow, J., Zaleski, C., Jha, S., Batut, P., Chaisson, M., Gingeras, T.R., STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29 (2013), 15–21.
-
(2013)
Bioinformatics
, vol.29
, pp. 15-21
-
-
Dobin, A.1
Davis, C.A.2
Schlesinger, F.3
Drenkow, J.4
Zaleski, C.5
Jha, S.6
Batut, P.7
Chaisson, M.8
Gingeras, T.R.9
-
21
-
-
84903533463
-
Ontogeny of early life immunity
-
Dowling, D.J., Levy, O., Ontogeny of early life immunity. Trends Immunol. 35 (2014), 299–310.
-
(2014)
Trends Immunol.
, vol.35
, pp. 299-310
-
-
Dowling, D.J.1
Levy, O.2
-
22
-
-
84962587669
-
Balancing immune protection and immune pathology by CD8+ T-cell responses to influenza infection
-
Duan, S., Thomas, P.G., Balancing immune protection and immune pathology by CD8+ T-cell responses to influenza infection. Front. Immunol., 7, 2016, 25.
-
(2016)
Front. Immunol.
, vol.7
, pp. 25
-
-
Duan, S.1
Thomas, P.G.2
-
23
-
-
84924386651
-
Diverse heterologous primary infections radically alter immunodominance hierarchies and clinical outcomes following H7N9 influenza challenge in mice
-
Duan, S., Meliopoulos, V.A., McClaren, J.L., Guo, X.-Z.J., Sanders, C.J., Smallwood, H.S., Webby, R.J., Schultz-Cherry, S.L., Doherty, P.C., Thomas, P.G., Diverse heterologous primary infections radically alter immunodominance hierarchies and clinical outcomes following H7N9 influenza challenge in mice. PLoS Pathog., 11, 2015, e1004642.
-
(2015)
PLoS Pathog.
, vol.11
, pp. e1004642
-
-
Duan, S.1
Meliopoulos, V.A.2
McClaren, J.L.3
Guo, X.-Z.J.4
Sanders, C.J.5
Smallwood, H.S.6
Webby, R.J.7
Schultz-Cherry, S.L.8
Doherty, P.C.9
Thomas, P.G.10
-
24
-
-
68849084891
-
Structure and signalling in the IL-17 receptor family
-
Gaffen, S.L., Structure and signalling in the IL-17 receptor family. Nat. Rev. Immunol. 9 (2009), 556–567.
-
(2009)
Nat. Rev. Immunol.
, vol.9
, pp. 556-567
-
-
Gaffen, S.L.1
-
25
-
-
0042123726
-
Gamma delta T cells provide an early source of interferon gamma in tumor immunity
-
Gao, Y., Yang, W., Pan, M., Scully, E., Girardi, M., Augenlicht, L.H., Craft, J., Yin, Z., Gamma delta T cells provide an early source of interferon gamma in tumor immunity. J. Exp. Med. 198 (2003), 433–442.
-
(2003)
J. Exp. Med.
, vol.198
, pp. 433-442
-
-
Gao, Y.1
Yang, W.2
Pan, M.3
Scully, E.4
Girardi, M.5
Augenlicht, L.H.6
Craft, J.7
Yin, Z.8
-
26
-
-
0034446687
-
T cell immunity in neonates
-
Garcia, A.M., Fadel, S.A., Cao, S., Sarzotti, M., T cell immunity in neonates. Immunol. Res. 22 (2000), 177–190.
-
(2000)
Immunol. Res.
, vol.22
, pp. 177-190
-
-
Garcia, A.M.1
Fadel, S.A.2
Cao, S.3
Sarzotti, M.4
-
27
-
-
84884683942
-
Group 2 innate lymphoid cell production of IL-5 is regulated by NKT cells during influenza virus infection
-
Gorski, S.A., Hahn, Y.S., Braciale, T.J., Group 2 innate lymphoid cell production of IL-5 is regulated by NKT cells during influenza virus infection. PLoS Pathog., 9, 2013, e1003615.
-
(2013)
PLoS Pathog.
, vol.9
, pp. e1003615
-
-
Gorski, S.A.1
Hahn, Y.S.2
Braciale, T.J.3
-
28
-
-
85019731124
-
New fronts emerge in the influenza cytokine storm
-
Guo, X.J., Thomas, P.G., New fronts emerge in the influenza cytokine storm. Semin. Immunopathol. 39 (2017), 541–550.
-
(2017)
Semin. Immunopathol.
, vol.39
, pp. 541-550
-
-
Guo, X.J.1
Thomas, P.G.2
-
29
-
-
84968872488
-
Rapid cloning, expression, and functional characterization of paired αβ and γδ T-cell receptor chains from single-cell analysis
-
Guo, X.-Z.J., Dash, P., Calverley, M., Tomchuck, S., Dallas, M.H., Thomas, P.G., Rapid cloning, expression, and functional characterization of paired αβ and γδ T-cell receptor chains from single-cell analysis. Mol. Ther. Methods Clin. Dev., 3, 2016, 15054.
-
(2016)
Mol. Ther. Methods Clin. Dev.
, vol.3
, pp. 15054
-
-
Guo, X.-Z.J.1
Dash, P.2
Calverley, M.3
Tomchuck, S.4
Dallas, M.H.5
Thomas, P.G.6
-
30
-
-
84989919014
-
Progesterone-based therapy protects against influenza by promoting lung repair and recovery in females
-
Hall, O.J., Limjunyawong, N., Vermillion, M.S., Robinson, D.P., Wohlgemuth, N., Pekosz, A., Mitzner, W., Klein, S.L., Progesterone-based therapy protects against influenza by promoting lung repair and recovery in females. PLoS Pathog., 12, 2016, e1005840.
-
(2016)
PLoS Pathog.
, vol.12
, pp. e1005840
-
-
Hall, O.J.1
Limjunyawong, N.2
Vermillion, M.S.3
Robinson, D.P.4
Wohlgemuth, N.5
Pekosz, A.6
Mitzner, W.7
Klein, S.L.8
-
31
-
-
0034091286
-
[γ][δ] cells: a right time and a right place for a conserved third way of protection
-
Hayday, A.C., [γ][δ] cells: a right time and a right place for a conserved third way of protection. Annu. Rev. Immunol. 18 (2000), 975–1026.
-
(2000)
Annu. Rev. Immunol.
, vol.18
, pp. 975-1026
-
-
Hayday, A.C.1
-
32
-
-
0034705225
-
A DNA transfection system for generation of influenza A virus from eight plasmids
-
Hoffmann, E., Neumann, G., Kawaoka, Y., Hobom, G., Webster, R.G., A DNA transfection system for generation of influenza A virus from eight plasmids. Proc. Natl. Acad. Sci. USA 97 (2000), 6108–6113.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 6108-6113
-
-
Hoffmann, E.1
Neumann, G.2
Kawaoka, Y.3
Hobom, G.4
Webster, R.G.5
-
33
-
-
84905869926
-
Repair and regeneration of the respiratory system: complexity, plasticity, and mechanisms of lung stem cell function
-
Hogan, B.L.M., Barkauskas, C.E., Chapman, H.A., Epstein, J.A., Jain, R., Hsia, C.C.W., Niklason, L., Calle, E., Le, A., Randell, S.H., et al. Repair and regeneration of the respiratory system: complexity, plasticity, and mechanisms of lung stem cell function. Cell Stem Cell 15 (2014), 123–138.
-
(2014)
Cell Stem Cell
, vol.15
, pp. 123-138
-
-
Hogan, B.L.M.1
Barkauskas, C.E.2
Chapman, H.A.3
Epstein, J.A.4
Jain, R.5
Hsia, C.C.W.6
Niklason, L.7
Calle, E.8
Le, A.9
Randell, S.H.10
-
34
-
-
0002294347
-
A simple sequentially rejective multiple test procedure
-
Holm, S., A simple sequentially rejective multiple test procedure. Scand. Stat. Theory Appl. 6 (1979), 65–70.
-
(1979)
Scand. Stat. Theory Appl.
, vol.6
, pp. 65-70
-
-
Holm, S.1
-
35
-
-
84922615231
-
Impaired gamma delta T cell-derived IL-17A and inflammasome activation during early respiratory syncytial virus infection in infants
-
Huang, H., Saravia, J., You, D., Shaw, A.J., Cormier, S.A., Impaired gamma delta T cell-derived IL-17A and inflammasome activation during early respiratory syncytial virus infection in infants. Immunol. Cell Biol. 93 (2015), 126–135.
-
(2015)
Immunol. Cell Biol.
, vol.93
, pp. 126-135
-
-
Huang, H.1
Saravia, J.2
You, D.3
Shaw, A.J.4
Cormier, S.A.5
-
36
-
-
84899503850
-
Innate immunity to influenza virus infection
-
Iwasaki, A., Pillai, P.S., Innate immunity to influenza virus infection. Nat. Rev. Immunol. 14 (2014), 315–328.
-
(2014)
Nat. Rev. Immunol.
, vol.14
, pp. 315-328
-
-
Iwasaki, A.1
Pillai, P.S.2
-
37
-
-
84924871402
-
− subset
-
− subset. Nat. Commun., 6, 2015, 6477.
-
(2015)
Nat. Commun.
, vol.6
, pp. 6477
-
-
Kashani, E.1
Föhse, L.2
Raha, S.3
Sandrock, I.4
Oberdörfer, L.5
Koenecke, C.6
Suerbaum, S.7
Weiss, S.8
Prinz, I.9
-
38
-
-
85045672673
-
γδ T cells producing interleukin-17A regulate adipose regulatory T cell homeostasis and thermogenesis
-
Kohlgruber, A.C., Gal-Oz, S.T., LaMarche, N.M., Shimazaki, M., Duquette, D., Nguyen, H.N., Mina, A.I., Paras, T., Tavakkoli, A., von Andrian, U., et al. γδ T cells producing interleukin-17A regulate adipose regulatory T cell homeostasis and thermogenesis. Nat. Immunol. 19 (2018), 464–474.
-
(2018)
Nat. Immunol.
, vol.19
, pp. 464-474
-
-
Kohlgruber, A.C.1
Gal-Oz, S.T.2
LaMarche, N.M.3
Shimazaki, M.4
Duquette, D.5
Nguyen, H.N.6
Mina, A.I.7
Paras, T.8
Tavakkoli, A.9
von Andrian, U.10
-
39
-
-
84905095220
-
T cell mediated immunity to influenza: mechanisms of viral control
-
La Gruta, N.L., Turner, S.J., T cell mediated immunity to influenza: mechanisms of viral control. Trends Immunol. 35 (2014), 396–402.
-
(2014)
Trends Immunol.
, vol.35
, pp. 396-402
-
-
La Gruta, N.L.1
Turner, S.J.2
-
40
-
-
82755174177
-
Infection with influenza virus induces IL-33 in murine lungs
-
Le Goffic, R., Arshad, M.I., Rauch, M., L'Helgoualc'h, A., Delmas, B., Piquet-Pellorce, C., Samson, M., Infection with influenza virus induces IL-33 in murine lungs. Am. J. Respir. Cell Mol. Biol. 45 (2011), 1125–1132.
-
(2011)
Am. J. Respir. Cell Mol. Biol.
, vol.45
, pp. 1125-1132
-
-
Le Goffic, R.1
Arshad, M.I.2
Rauch, M.3
L'Helgoualc'h, A.4
Delmas, B.5
Piquet-Pellorce, C.6
Samson, M.7
-
41
-
-
58149316094
-
IMGT, the international ImMunoGeneTics information system
-
Lefranc, M.-P., Giudicelli, V., Ginestoux, C., Jabado-Michaloud, J., Folch, G., Bellahcene, F., Wu, Y., Gemrot, E., Brochet, X., Lane, J., et al. IMGT, the international ImMunoGeneTics information system. Nucleic Acids Res. 37 (2009), D1006–D1012.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. D1006-D1012
-
-
Lefranc, M.-P.1
Giudicelli, V.2
Ginestoux, C.3
Jabado-Michaloud, J.4
Folch, G.5
Bellahcene, F.6
Wu, Y.7
Gemrot, E.8
Brochet, X.9
Lane, J.10
-
42
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Δ Δ C(T)) Method
-
Livak, K.J., Schmittgen, T.D., Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Δ Δ C(T)) Method. Methods 25 (2001), 402–408.
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
43
-
-
33749138039
-
IL-17 production is dominated by gammadelta T cells rather than CD4 T cells during Mycobacterium tuberculosis infection
-
Lockhart, E., Green, A.M., Flynn, J.L., IL-17 production is dominated by gammadelta T cells rather than CD4 T cells during Mycobacterium tuberculosis infection. J. Immunol. 177 (2006), 4662–4669.
-
(2006)
J. Immunol.
, vol.177
, pp. 4662-4669
-
-
Lockhart, E.1
Green, A.M.2
Flynn, J.L.3
-
44
-
-
85042616430
-
A macrophage colony-stimulating-factor-producing γδ T cell subset prevents malarial parasitemic recurrence
-
Mamedov, M.R., Scholzen, A., Nair, R.V., Cumnock, K., Kenkel, J.A., Oliveira, J.H.M., Trujillo, D.L., Saligrama, N., Zhang, Y., Rubelt, F., et al. A macrophage colony-stimulating-factor-producing γδ T cell subset prevents malarial parasitemic recurrence. Immunity 48 (2018), 350–363.e7.
-
(2018)
Immunity
, vol.48
, pp. 350-363.e7
-
-
Mamedov, M.R.1
Scholzen, A.2
Nair, R.V.3
Cumnock, K.4
Kenkel, J.A.5
Oliveira, J.H.M.6
Trujillo, D.L.7
Saligrama, N.8
Zhang, Y.9
Rubelt, F.10
-
45
-
-
78649775562
-
Enrichment map: a network-based method for gene-set enrichment visualization and interpretation
-
Merico, D., Isserlin, R., Stueker, O., Emili, A., Bader, G.D., Enrichment map: a network-based method for gene-set enrichment visualization and interpretation. PLoS ONE, 5, 2010, e13984.
-
(2010)
PLoS ONE
, vol.5
, pp. e13984
-
-
Merico, D.1
Isserlin, R.2
Stueker, O.3
Emili, A.4
Bader, G.D.5
-
46
-
-
84896711467
-
IL-17A promotes the exacerbation of IL-33-induced airway hyperresponsiveness by enhancing neutrophilic inflammation via CXCR2 signaling in mice
-
Mizutani, N., Nabe, T., Yoshino, S., IL-17A promotes the exacerbation of IL-33-induced airway hyperresponsiveness by enhancing neutrophilic inflammation via CXCR2 signaling in mice. J. Immunol. 192 (2014), 1372–1384.
-
(2014)
J. Immunol.
, vol.192
, pp. 1372-1384
-
-
Mizutani, N.1
Nabe, T.2
Yoshino, S.3
-
47
-
-
85027948313
-
Innate lymphoid cells promote lung-tissue homeostasis after infection with influenza virus
-
Monticelli, L.A., Sonnenberg, G.F., Abt, M.C., Alenghat, T., Ziegler, C.G.K., Doering, T.A., Angelosanto, J.M., Laidlaw, B.J., Yang, C.Y., Sathaliyawala, T., et al. Innate lymphoid cells promote lung-tissue homeostasis after infection with influenza virus. Nat. Immunol. 12 (2011), 1045–1054.
-
(2011)
Nat. Immunol.
, vol.12
, pp. 1045-1054
-
-
Monticelli, L.A.1
Sonnenberg, G.F.2
Abt, M.C.3
Alenghat, T.4
Ziegler, C.G.K.5
Doering, T.A.6
Angelosanto, J.M.7
Laidlaw, B.J.8
Yang, C.Y.9
Sathaliyawala, T.10
-
48
-
-
0031824006
-
Contribution of virus-specific CD8+ cytotoxic T cells to virus clearance or pathologic manifestations of influenza virus infection in a T cell receptor transgenic mouse model
-
Moskophidis, D., Kioussis, D., Contribution of virus-specific CD8+ cytotoxic T cells to virus clearance or pathologic manifestations of influenza virus infection in a T cell receptor transgenic mouse model. J. Exp. Med. 188 (1998), 223–232.
-
(1998)
J. Exp. Med.
, vol.188
, pp. 223-232
-
-
Moskophidis, D.1
Kioussis, D.2
-
49
-
-
0037603607
-
Influenza virus infection in infancy and early childhood
-
Munoz, F.M., Influenza virus infection in infancy and early childhood. Paediatr. Respir. Rev. 4 (2003), 99–104.
-
(2003)
Paediatr. Respir. Rev.
, vol.4
, pp. 99-104
-
-
Munoz, F.M.1
-
50
-
-
84894231691
-
Mucosal immune responses predict clinical outcomes during influenza infection independently of age and viral load
-
Oshansky, C.M., Gartland, A.J., Wong, S.-S., Jeevan, T., Wang, D., Roddam, P.L., Caniza, M.A., Hertz, T., Devincenzo, J.P., Webby, R.J., Thomas, P.G., Mucosal immune responses predict clinical outcomes during influenza infection independently of age and viral load. Am. J. Respir. Crit. Care Med. 189 (2014), 449–462.
-
(2014)
Am. J. Respir. Crit. Care Med.
, vol.189
, pp. 449-462
-
-
Oshansky, C.M.1
Gartland, A.J.2
Wong, S.-S.3
Jeevan, T.4
Wang, D.5
Roddam, P.L.6
Caniza, M.A.7
Hertz, T.8
Devincenzo, J.P.9
Webby, R.J.10
Thomas, P.G.11
-
51
-
-
84946567263
-
Interleukin-17 promotes angiogenesis by stimulating VEGF production of cancer cells via the STAT3/GIV signaling pathway in non-small-cell lung cancer
-
Pan, B., Shen, J., Cao, J., Zhou, Y., Shang, L., Jin, S., Cao, S., Che, D., Liu, F., Yu, Y., Interleukin-17 promotes angiogenesis by stimulating VEGF production of cancer cells via the STAT3/GIV signaling pathway in non-small-cell lung cancer. Sci. Rep., 5, 2015, 16053.
-
(2015)
Sci. Rep.
, vol.5
, pp. 16053
-
-
Pan, B.1
Shen, J.2
Cao, J.3
Zhou, Y.4
Shang, L.5
Jin, S.6
Cao, S.7
Che, D.8
Liu, F.9
Yu, Y.10
-
53
-
-
84859378165
-
Endogenous IL-33 is highly expressed in mouse epithelial barrier tissues, lymphoid organs, brain, embryos, and inflamed tissues: in situ analysis using a novel Il-33-LacZ gene trap reporter strain
-
Pichery, M., Mirey, E., Mercier, P., Lefrancais, E., Dujardin, A., Ortega, N., Girard, J.-P., Endogenous IL-33 is highly expressed in mouse epithelial barrier tissues, lymphoid organs, brain, embryos, and inflamed tissues: in situ analysis using a novel Il-33-LacZ gene trap reporter strain. J. Immunol. 188 (2012), 3488–3495.
-
(2012)
J. Immunol.
, vol.188
, pp. 3488-3495
-
-
Pichery, M.1
Mirey, E.2
Mercier, P.3
Lefrancais, E.4
Dujardin, A.5
Ortega, N.6
Girard, J.-P.7
-
54
-
-
62849124659
-
CD27 is a thymic determinant of the balance between interferon-γ- and interleukin 17-producing gammadelta T cell subsets
-
Ribot, J.C., deBarros, A., Pang, D.J., Neves, J.F., Peperzak, V., Roberts, S.J., Girardi, M., Borst, J., Hayday, A.C., Pennington, D.J., Silva-Santos, B., CD27 is a thymic determinant of the balance between interferon-γ- and interleukin 17-producing gammadelta T cell subsets. Nat. Immunol. 10 (2009), 427–436.
-
(2009)
Nat. Immunol.
, vol.10
, pp. 427-436
-
-
Ribot, J.C.1
deBarros, A.2
Pang, D.J.3
Neves, J.F.4
Peperzak, V.5
Roberts, S.J.6
Girardi, M.7
Borst, J.8
Hayday, A.C.9
Pennington, D.J.10
Silva-Santos, B.11
-
55
-
-
84926507971
-
limma powers differential expression analyses for RNA-sequencing and microarray studies
-
Ritchie, M.E., Phipson, B., Wu, D., Hu, Y., Law, C.W., Shi, W., Smyth, G.K., limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucleic Acids Res., 43, 2015, e47.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. e47
-
-
Ritchie, M.E.1
Phipson, B.2
Wu, D.3
Hu, Y.4
Law, C.W.5
Shi, W.6
Smyth, G.K.7
-
56
-
-
77953176036
-
A scaling normalization method for differential expression analysis of RNA-seq data
-
Robinson, M.D., Oshlack, A., A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol., 11, 2010, R25.
-
(2010)
Genome Biol.
, vol.11
, pp. R25
-
-
Robinson, M.D.1
Oshlack, A.2
-
57
-
-
84979609779
-
IL-17A-producing resident memory γδ T cells orchestrate the innate immune response to secondary oral Listeria monocytogenes infection
-
Romagnoli, P.A., Sheridan, B.S., Pham, Q.-M., Lefrançois, L., Khanna, K.M., IL-17A-producing resident memory γδ T cells orchestrate the innate immune response to secondary oral Listeria monocytogenes infection. Proc. Natl. Acad. Sci. USA 113 (2016), 8502–8507.
-
(2016)
Proc. Natl. Acad. Sci. USA
, vol.113
, pp. 8502-8507
-
-
Romagnoli, P.A.1
Sheridan, B.S.2
Pham, Q.-M.3
Lefrançois, L.4
Khanna, K.M.5
-
58
-
-
84892604156
-
Characterization of innate responses to influenza virus infection in a novel lung type I epithelial cell model
-
Rosenberger, C.M., Podyminogin, R.L., Askovich, P.S., Navarro, G., Kaiser, S.M., Sanders, C.J., McClaren, J.L., Tam, V.C., Dash, P., Noonan, J.G., et al. Characterization of innate responses to influenza virus infection in a novel lung type I epithelial cell model. J. Gen. Virol. 95 (2014), 350–362.
-
(2014)
J. Gen. Virol.
, vol.95
, pp. 350-362
-
-
Rosenberger, C.M.1
Podyminogin, R.L.2
Askovich, P.S.3
Navarro, G.4
Kaiser, S.M.5
Sanders, C.J.6
McClaren, J.L.7
Tam, V.C.8
Dash, P.9
Noonan, J.G.10
-
59
-
-
85013921443
-
First-breath-induced type 2 pathways shape the lung immune environment
-
Saluzzo, S., Gorki, A.-D., Rana, B.M.J., Martins, R., Scanlon, S., Starkl, P., Lakovits, K., Hladik, A., Korosec, A., Sharif, O., et al. First-breath-induced type 2 pathways shape the lung immune environment. Cell Rep. 18 (2017), 1893–1905.
-
(2017)
Cell Rep.
, vol.18
, pp. 1893-1905
-
-
Saluzzo, S.1
Gorki, A.-D.2
Rana, B.M.J.3
Martins, R.4
Scanlon, S.5
Starkl, P.6
Lakovits, K.7
Hladik, A.8
Korosec, A.9
Sharif, O.10
-
60
-
-
34250658084
-
Selective chemical probe inhibitor of Stat3, identified through structure-based virtual screening, induces antitumor activity
-
Siddiquee, K., Zhang, S., Guida, W.C., Blaskovich, M.A., Greedy, B., Lawrence, H.R., Yip, M.L.R., Jove, R., McLaughlin, M.M., Lawrence, N.J., et al. Selective chemical probe inhibitor of Stat3, identified through structure-based virtual screening, induces antitumor activity. Proc. Natl. Acad. Sci. USA 104 (2007), 7391–7396.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 7391-7396
-
-
Siddiquee, K.1
Zhang, S.2
Guida, W.C.3
Blaskovich, M.A.4
Greedy, B.5
Lawrence, H.R.6
Yip, M.L.R.7
Jove, R.8
McLaughlin, M.M.9
Lawrence, N.J.10
-
61
-
-
0035134439
-
Type 1/Type 2 immunity in infectious diseases
-
Spellberg, B., Edwards, J.E. Jr., Type 1/Type 2 immunity in infectious diseases. Clin. Infect. Dis. 32 (2001), 76–102.
-
(2001)
Clin. Infect. Dis.
, vol.32
, pp. 76-102
-
-
Spellberg, B.1
Edwards, J.E.2
-
62
-
-
85004147167
-
Hedgehog: the key to maintaining adult lung repair and regeneration
-
Sriperumbudur, A., Breitzig, M., Lockey, R., Kolliputi, N., Hedgehog: the key to maintaining adult lung repair and regeneration. J. Cell Commun. Signal. 11 (2017), 95–96.
-
(2017)
J. Cell Commun. Signal.
, vol.11
, pp. 95-96
-
-
Sriperumbudur, A.1
Breitzig, M.2
Lockey, R.3
Kolliputi, N.4
-
63
-
-
27344435774
-
Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
-
Subramanian, A., Tamayo, P., Mootha, V.K., Mukherjee, S., Ebert, B.L., Gillette, M.A., Paulovich, A., Pomeroy, S.L., Golub, T.R., Lander, E.S., Mesirov, J.P., Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl. Acad. Sci. USA 102 (2005), 15545–15550.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
Mesirov, J.P.11
-
64
-
-
77956499048
-
Influenza virus evolution, host adaptation, and pandemic formation
-
Taubenberger, J.K., Kash, J.C., Influenza virus evolution, host adaptation, and pandemic formation. Cell Host Microbe 7 (2010), 440–451.
-
(2010)
Cell Host Microbe
, vol.7
, pp. 440-451
-
-
Taubenberger, J.K.1
Kash, J.C.2
-
65
-
-
41749124757
-
The pathology of influenza virus infections
-
Taubenberger, J.K., Morens, D.M., The pathology of influenza virus infections. Annu. Rev. Pathol. 3 (2008), 499–522.
-
(2008)
Annu. Rev. Pathol.
, vol.3
, pp. 499-522
-
-
Taubenberger, J.K.1
Morens, D.M.2
-
66
-
-
84872930787
-
Six-of-the-best: unique contributions of γδ T cells to immunology
-
Vantourout, P., Hayday, A., Six-of-the-best: unique contributions of γδ T cells to immunology. Nat. Rev. Immunol. 13 (2013), 88–100.
-
(2013)
Nat. Rev. Immunol.
, vol.13
, pp. 88-100
-
-
Vantourout, P.1
Hayday, A.2
-
67
-
-
0003895851
-
Modern Applied Statistics with S
-
Springer New York
-
Venables, W.N., Ripley, B.D., Modern Applied Statistics with S. 2002, Springer New York.
-
(2002)
-
-
Venables, W.N.1
Ripley, B.D.2
-
68
-
-
67650495415
-
IL-17 can promote tumor growth through an IL-6-Stat3 signaling pathway
-
Wang, L., Yi, T., Kortylewski, M., Pardoll, D.M., Zeng, D., Yu, H., IL-17 can promote tumor growth through an IL-6-Stat3 signaling pathway. J. Exp. Med. 206 (2009), 1457–1464.
-
(2009)
J. Exp. Med.
, vol.206
, pp. 1457-1464
-
-
Wang, L.1
Yi, T.2
Kortylewski, M.3
Pardoll, D.M.4
Zeng, D.5
Yu, H.6
-
69
-
-
80055117444
-
A critical role of IL-17 in modulating the B-cell response during H5N1 influenza virus infection
-
Wang, X., Chan, C.C.S., Yang, M., Deng, J., Poon, V.K.M., Leung, V.H.C., Ko, K.-H., Zhou, J., Yuen, K.Y., Zheng, B.-J., Lu, L., A critical role of IL-17 in modulating the B-cell response during H5N1 influenza virus infection. Cell. Mol. Immunol. 8 (2011), 462–468.
-
(2011)
Cell. Mol. Immunol.
, vol.8
, pp. 462-468
-
-
Wang, X.1
Chan, C.C.S.2
Yang, M.3
Deng, J.4
Poon, V.K.M.5
Leung, V.H.C.6
Ko, K.-H.7
Zhou, J.8
Yuen, K.Y.9
Zheng, B.-J.10
Lu, L.11
-
70
-
-
84902603347
-
Small intestinal intraepithelial TCRγδ+ T lymphocytes are present in the premature intestine but selectively reduced in surgical necrotizing enterocolitis
-
Weitkamp, J.-H., Rosen, M.J., Zhao, Z., Koyama, T., Geem, D., Denning, T.L., Rock, M.T., Moore, D.J., Halpern, M.D., Matta, P., Denning, P.W., Small intestinal intraepithelial TCRγδ+ T lymphocytes are present in the premature intestine but selectively reduced in surgical necrotizing enterocolitis. PLoS ONE, 9, 2014, e99042.
-
(2014)
PLoS ONE
, vol.9
, pp. e99042
-
-
Weitkamp, J.-H.1
Rosen, M.J.2
Zhao, Z.3
Koyama, T.4
Geem, D.5
Denning, T.L.6
Rock, M.T.7
Moore, D.J.8
Halpern, M.D.9
Matta, P.10
Denning, P.W.11
-
71
-
-
51549111662
-
Inchoate CD8+ T cell responses in neonatal mice permit influenza-induced persistent pulmonary dysfunction
-
You, D., Ripple, M., Balakrishna, S., Troxclair, D., Sandquist, D., Ding, L., Ahlert, T.A., Cormier, S.A., Inchoate CD8+ T cell responses in neonatal mice permit influenza-induced persistent pulmonary dysfunction. J. Immunol. 181 (2008), 3486–3494.
-
(2008)
J. Immunol.
, vol.181
, pp. 3486-3494
-
-
You, D.1
Ripple, M.2
Balakrishna, S.3
Troxclair, D.4
Sandquist, D.5
Ding, L.6
Ahlert, T.A.7
Cormier, S.A.8
-
72
-
-
84923015891
-
Emerging functions of amphiregulin in orchestrating immunity, inflammation, and tissue repair
-
Zaiss, D.M.W., Gause, W.C., Osborne, L.C., Artis, D., Emerging functions of amphiregulin in orchestrating immunity, inflammation, and tissue repair. Immunity 42 (2015), 216–226.
-
(2015)
Immunity
, vol.42
, pp. 216-226
-
-
Zaiss, D.M.W.1
Gause, W.C.2
Osborne, L.C.3
Artis, D.4
|