Slingshot: Cell lineage and pseudotime inference for single-cell transcriptomics

BMC Genomics

Volumn 19, Issue 1, 2018, Pages

  Street, Kelly ^a   Risso, Davide ^b   Fletcher, Russell B ^a   Das, Diya ^a   Ngai, John ^a,c   Yosef, Nir ^a   Purdom, Elizabeth ^a   Dudoit, Sandrine ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b WEILL CORNELL MEDICAL COLLEGE   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Lineage inference; Pseudotime inference; RNA Seq; Single cell

Indexed keywords

ARTICLE; CELL LINEAGE; CLUSTER ANALYSIS; GENE EXPRESSION; MEASUREMENT ACCURACY; PSEUDOTIME INFERENCE; RNA SEQUENCE; SIMULATION; SINGLE CELL ANALYSIS; SLINGSHOT; STATISTICAL ANALYSIS; STATISTICAL PARAMETERS; TRANSCRIPTOMICS; GENE EXPRESSION PROFILING; HUMAN; METABOLISM; PROCEDURES; SKELETAL MYOBLAST; SOFTWARE;

CELL LINEAGE; CLUSTER ANALYSIS; GENE EXPRESSION PROFILING; HUMANS; MYOBLASTS, SKELETAL; SINGLE-CELL ANALYSIS; SOFTWARE;

EID: 85048725973     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-018-4772-0     Document Type: Article

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