Genome-wide investigation of mRNA lifetime determinants in Escherichia coli cells cultured at different growth rates

BMC Genomics

Volumn 16, Issue 1, 2015, Pages

  Esquerré, Thomas ^a,b,c   Moisan, Annick ^d   Chiapello, Hélène ^d   Arike, Liisa ^e   Vilu, Raivo ^e,f   Gaspin, Christine ^d   Cocaign Bousquet, Muriel ^a,b,c   Girbal, Laurence ^a,b,c  

^a INSA   (France)

^b UMR792 INGÉNIERIE DES SYSTÈMES BIOLOGIQUES ET DES PROCÉDÉS   (France)

^c CNRS   (France)

^d CEMAGREF   (France)

^e Akadeemia tee 15A   (Estonia)

^f TALLINN UNIVERSITY OF TECHNOLOGY   (Estonia)

Author keywords

Determinants; Escherichia coli; Genome wide analysis; Growth rate; mRNA decay

Indexed keywords

MESSENGER RNA; 5' UNTRANSLATED REGION; CODON; ESCHERICHIA COLI PROTEIN;

5' UNTRANSLATED REGION; ARTICLE; BACTERIAL CELL; CARBOHYDRATE METABOLISM; CODON USAGE; DNA BASE COMPOSITION; ESCHERICHIA COLI; GENE FUNCTION; GENOME ANALYSIS; GROWTH RATE; HALF LIFE TIME; NONHUMAN; NUCLEOTIDE METABOLISM; OPEN READING FRAME; RNA STABILITY; BACTERIAL GENOME; BIOLOGICAL MODEL; CHEMISTRY; CODON; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; NUCLEOTIDE SEQUENCE;

ESCHERICHIA COLI;

5' UNTRANSLATED REGIONS; BASE COMPOSITION; BASE SEQUENCE; CODON; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENOME, BACTERIAL; HALF-LIFE; MODELS, BIOLOGICAL; OPEN READING FRAMES; RNA STABILITY; RNA, MESSENGER;

EID: 85043226173     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-015-1482-8     Document Type: Article

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