-
1
-
-
0029947261
-
STAB-SD: A Shine-Dalgarno sequence in the 5' untranslated region is a determinant of mRNA stability
-
Agaisse H, Lereclus D. 1996. STAB-SD: A Shine-Dalgarno sequence in the 5' untranslated region is a determinant of mRNA stability. Mol Microbiol 20:633-643.
-
(1996)
Mol Microbiol
, vol.20
, pp. 633-643
-
-
Agaisse, H.1
Lereclus, D.2
-
2
-
-
0018072940
-
Isolation, genetic mapping, and some characterization of a mutation in Escherichia coli that affects the processing of ribonucleic acids
-
Apirion D. 1978. Isolation, genetic mapping, and some characterization of a mutation in Escherichia coli that affects the processing of ribonucleic acids. Genetics 90:659-671.
-
(1978)
Genetics
, vol.90
, pp. 659-671
-
-
Apirion, D.1
-
3
-
-
0024095739
-
Stabilization of discrete mRNA breakdown products in ams pnp rnb multiple mutants of Escherichia coli K-12
-
Arraiano CM, Yancey SD, Kushner SR. 1988. Stabilization of discrete mRNA breakdown products in ams pnp rnb multiple mutants of Escherichia coli K-12. J Bacteriol 170:4625-4633.
-
(1988)
J Bacteriol
, vol.170
, pp. 4625-4633
-
-
Arraiano, C.M.1
Yancey, S.D.2
Kushner, S.R.3
-
4
-
-
0026008229
-
The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli
-
Babitzke P, Kushner SR. 1991. The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli. Proc Natl Acad Sci USA 88:1-5.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 1-5
-
-
Babitzke, P.1
Kushner, S.R.2
-
5
-
-
0025766223
-
Lack of a 5' non-coding region in Tn1721 encoded tetR mRNA is associated with a low efficiency of translation and a short half-life in Escherichia coli
-
Baumeister R, Flache P, Melefors Ö, von Gabain A, Hillen W. 1991. Lack of a 5' non-coding region in Tn1721 encoded tetR mRNA is associated with a low efficiency of translation and a short half-life in Escherichia coli. Nucleic Acids Res 19:4595-4600.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 4595-4600
-
-
Baumeister, R.1
Flache, P.2
Melefors, Ö.3
Von Gabain, A.4
Hillen, W.5
-
7
-
-
0022496955
-
The stability of E. coli gene transcripts is dependent on determinants localized to specific mRNA segments
-
Belasco JG, Nilsson G, von Gabain A, Cohen SN. 1986. The stability of E. coli gene transcripts is dependent on determinants localized to specific mRNA segments. Cell 46:245-251.
-
(1986)
Cell
, vol.46
, pp. 245-251
-
-
Belasco, J.G.1
Nilsson, G.2
Von Gabain, A.3
Cohen, S.N.4
-
9
-
-
0026492668
-
Control of RNase E-mediated RNA degradation by 5′-terminal base pairing in E. coli
-
Bouvet P, Belasco JG. 1992. Control of RNase E-mediated RNA degradation by 5′-terminal base pairing in E. coli. Nature 360:488-491.
-
(1992)
Nature
, vol.360
, pp. 488-491
-
-
Bouvet, P.1
Belasco, J.G.2
-
10
-
-
0028269435
-
Co-purification of E. coli RNase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation
-
Carpousis AJ, Van Houwe G, Ehretsmann C, Krisch HM. 1994. Co-purification of E. coli RNase E and PNPase: Evidence for a specific association between two enzymes important in RNA processing and degradation. Cell 76:889-900.
-
(1994)
Cell
, vol.76
, pp. 889-900
-
-
Carpousis, A.J.1
Van Houwe, G.2
Ehretsmann, C.3
Krisch, H.M.4
-
11
-
-
0025814702
-
Structure and function of a bacterial mRNA stabilizer: Analysis of the 5′ untranslated region of ompa mRNA
-
Chen LH, Emory SA, Bricker AL, Bouvet P, Belasco JG. 1991. Structure and function of a bacterial mRNA stabilizer: Analysis of the 5′ untranslated region of ompA mRNA. J Bacteriol 173:4578-4586.
-
(1991)
J Bacteriol
, vol.173
, pp. 4578-4586
-
-
Chen, L.H.1
Emory, S.A.2
Bricker, A.L.3
Bouvet, P.4
Belasco, J.G.5
-
12
-
-
34250257369
-
RNA processing and degradation by RNase III
-
Belasco JG Brawerman G, eds. San Diego: Academic Press
-
Court D. 1993. RNA processing and degradation by RNase III. In: Belasco JG Brawerman G, eds. Control of messenger RNA stability. San Diego: Academic Press, pp 71-116.
-
(1993)
Control of Messenger RNA Stability
, pp. 71-116
-
-
Court, D.1
-
13
-
-
0003395950
-
Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12
-
Donovan WP, Kushner SR. 1986. Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12. Proc Natl Acad Sci USA 83:120-124.
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 120-124
-
-
Donovan, W.P.1
Kushner, S.R.2
-
14
-
-
0025312772
-
The ompa 5′ untranslated RNA segment functions in Escherichia coli as a growth-rate-regulated mRNA stabilizer whose activity is unrelated to translational efficiency
-
Emory SA, Belasco JG. 1990. The ompA 5′ untranslated RNA segment functions in Escherichia coli as a growth-rate-regulated mRNA stabilizer whose activity is unrelated to translational efficiency. J Bacteriol 172:4472-4481.
-
(1990)
J Bacteriol
, vol.172
, pp. 4472-4481
-
-
Emory, S.A.1
Belasco, J.G.2
-
15
-
-
0026602761
-
A 5′-terminal stem-loop structure can stabilize mRNA in Escherichia coli
-
Emory SA, Bouvet P, Belasco JG. 1992. A 5′-terminal stem-loop structure can stabilize mRNA in Escherichia coli. Genes & Dev 6:135-148.
-
(1992)
Genes & Dev
, vol.6
, pp. 135-148
-
-
Emory, S.A.1
Bouvet, P.2
Belasco, J.G.3
-
16
-
-
0019476056
-
Inactivation of the ribonucleic acid-processing enzyme ribonuclease E blocks cell division
-
Goldblum K, Apirion D. 1981. Inactivation of the ribonucleic acid-processing enzyme ribonuclease E blocks cell division. J Bacteriol 146:128-132.
-
(1981)
J Bacteriol
, vol.146
, pp. 128-132
-
-
Goldblum, K.1
Apirion, D.2
-
17
-
-
0028282567
-
The ompa 5′ untranslated region impedes a major pathway for mRNA degradation in Escherichia coli
-
Hansen MJ, Chen LH, Fejzo MLS, Belasco JG. 1994. The ompA 5′ untranslated region impedes a major pathway for mRNA degradation in Escherichia coli. Mol Microbiol 12:707-716.
-
(1994)
Mol Microbiol
, vol.12
, pp. 707-716
-
-
Hansen, M.J.1
Chen, L.H.2
Fejzo, M.L.S.3
Belasco, J.G.4
-
18
-
-
0025976067
-
Detection of Escherichia coli ribosome binding at translation initiation sites in the absence of tRNA
-
Hartz D, McPheeters DS, Green L, Gold L. 1991. Detection of Escherichia coli ribosome binding at translation initiation sites in the absence of tRNA. J Mol Biol 218:99-105.
-
(1991)
J Mol Biol
, vol.218
, pp. 99-105
-
-
Hartz, D.1
McPheeters, D.S.2
Green, L.3
Gold, L.4
-
19
-
-
0029946715
-
Effect of the pufQ-pufB intercistronic region on pufmRNA stability in Rhodobacter capsulatus
-
Heck C, Rothfuchs R, Jager A, Rauhut R, Klug G. 1996. Effect of the pufQ-pufB intercistronic region on pufmRNA stability in Rhodobacter capsulatus. Mol Microbiol 20:1165-1178.
-
(1996)
Mol Microbiol
, vol.20
, pp. 1165-1178
-
-
Heck, C.1
Rothfuchs, R.2
Jager, A.3
Rauhut, R.4
Klug, G.5
-
20
-
-
0002404647
-
The role of the 3' end in mRNA stability and decay
-
Belasco JG, Brawerman G, eds. San Diego: Academic Press
-
Higgins CF, Causton HC, Dance GSC, Mudd EA. 1993. The role of the 3' end in mRNA stability and decay. In: Belasco JG, Brawerman G, eds. Control of messenger RNA stability. San Diego: Academic Press, pp 13-30.
-
(1993)
Control of Messenger RNA Stability
, pp. 13-30
-
-
Higgins, C.F.1
Causton, H.C.2
Dance, G.S.C.3
Mudd, E.A.4
-
21
-
-
0029041956
-
A polypurine sequence that acts as a 5' mRNA stabilizer in Bacillus subtilis
-
Hue KK, Cohen SD, Bechhofer DH. 1995. A polypurine sequence that acts as a 5' mRNA stabilizer in Bacillus subtilis. J Bacteriol 177:3465-3471.
-
(1995)
J Bacteriol
, vol.177
, pp. 3465-3471
-
-
Hue, K.K.1
Cohen, S.D.2
Bechhofer, D.H.3
-
22
-
-
0028797303
-
RNase E autoregulates its synthesis by controlling the degradation rate of its own mRNA in Escherichia coli: Unusual sensitivity of the me transcript to RNase e activity
-
Jain C, Belasco JG. 1995. RNase E autoregulates its synthesis by controlling the degradation rate of its own mRNA in Escherichia coli: Unusual sensitivity of the me transcript to RNase E activity. Genes & Dev 9:84-96.
-
(1995)
Genes & Dev
, vol.9
, pp. 84-96
-
-
Jain, C.1
Belasco, J.G.2
-
23
-
-
0027257206
-
IS10 mRNA stability and steady state levels in Escherichia coli: Indirect effects of translation and role of rne function
-
Jain C, Kleckner N. 1993. IS10 mRNA stability and steady state levels in Escherichia coli: Indirect effects of translation and role of rne function. Mol Microbiol 9:233-247.
-
(1993)
Mol Microbiol
, vol.9
, pp. 233-247
-
-
Jain, C.1
Kleckner, N.2
-
24
-
-
0026658531
-
RNase PH is essential for tRNA processing and viability in RNase-deficient Escherichia coli cells
-
Kelly KO, Reuven NB, Li Z, Deutscher MP. 1992. RNase PH is essential for tRNA processing and viability in RNase-deficient Escherichia coli cells. J Biol Chem 267:16015-16018.
-
(1992)
J Biol Chem
, vol.267
, pp. 16015-16018
-
-
Kelly, K.O.1
Reuven, N.B.2
Li, Z.3
Deutscher, M.P.4
-
25
-
-
0025046732
-
Cleavages in the 5′ region of the ompa and bla mRNA control stability: Studies with an E. coli mutant altering mRNA stability and a novel endoribonuclease
-
Lundberg U, von Gabain A, Melefors Ö. 1990. Cleavages in the 5′ region of the ompA and bla mRNA control stability: Studies with an E. coli mutant altering mRNA stability and a novel endoribonuclease. EMBO J 9:2731-2741.
-
(1990)
EMBO J
, vol.9
, pp. 2731-2741
-
-
Lundberg, U.1
Von Gabain, A.2
Melefors, Ö.3
-
26
-
-
0024720429
-
Stabilization of the 3′ one-third of Escherichia coli ribosomal protein S20 mRNA in mutants lacking polynucleotide phosphorylase
-
Mackie GA. 1989. Stabilization of the 3′ one-third of Escherichia coli ribosomal protein S20 mRNA in mutants lacking polynucleotide phosphorylase. J Bacteriol 171:4112-4120.
-
(1989)
J Bacteriol
, vol.171
, pp. 4112-4120
-
-
Mackie, G.A.1
-
27
-
-
0029844518
-
Expression and regulation of the rnc and pdxJ operons of Escherichia coli
-
Matsunaga J, Dyer M, Simons EL, Simons RW. 1996a. Expression and regulation of the rnc and pdxJ operons of Escherichia coli. Mol Microbiol 22:977-989.
-
(1996)
Mol Microbiol
, vol.22
, pp. 977-989
-
-
Matsunaga, J.1
Dyer, M.2
Simons, E.L.3
Simons, R.W.4
-
28
-
-
0029856238
-
RNase III autoregulation: Structure and function of rncO, the posttranscriptional "operator"
-
Matsunaga J, Simons EL, Simons RW. 1996b. RNase III autoregulation: Structure and function of rncO, the posttranscriptional "operator". RNA 2:1228-1240.
-
(1996)
RNA
, vol.2
, pp. 1228-1240
-
-
Matsunaga, J.1
Simons, E.L.2
Simons, R.W.3
-
29
-
-
0025906534
-
Genetic studies of cleavage-initiated mRNA decay and processing of ribosomal 9S RNA show that the Escherichia coli ams and rne loci are the same
-
Melefors Ö, von Gabain A. 1991. Genetic studies of cleavage-initiated mRNA decay and processing of ribosomal 9S RNA show that the Escherichia coli ams and rne loci are the same. Mol Microbiol 5:857-864.
-
(1991)
Mol Microbiol
, vol.5
, pp. 857-864
-
-
Melefors, Ö.1
Von Gabain, A.2
-
30
-
-
0022470564
-
Rapid chemical probing of conformation in 16S ribosomal RNA and 30S ribosomal subunits using primer extension
-
Moazed D, Stern S, Noller HF. 1986. Rapid chemical probing of conformation in 16S ribosomal RNA and 30S ribosomal subunits using primer extension. J Mol Biol 187:399-416.
-
(1986)
J Mol Biol
, vol.187
, pp. 399-416
-
-
Moazed, D.1
Stern, S.2
Noller, H.F.3
-
31
-
-
0025688893
-
RNase E, an endoribonuclease, has a general role in the chemical decay of E. coli mRNA: Evidence that rne and ams are the same genetic locus
-
Mudd EA, Krisch HM, Higgins CF. 1990. RNase E, an endoribonuclease, has a general role in the chemical decay of E. coli mRNA: Evidence that rne and ams are the same genetic locus. Mol Mirobiol 4:2127-2135.
-
(1990)
Mol Mirobiol
, vol.4
, pp. 2127-2135
-
-
Mudd, E.A.1
Krisch, H.M.2
Higgins, C.F.3
-
32
-
-
0023378033
-
Effect of premature termination of translation on mRNA stability depends on the site of ribosome release
-
Nilsson G, Belasco JG, Cohen SN, von Gabain A. 1987. Effect of premature termination of translation on mRNA stability depends on the site of ribosome release. Proc Natl Acad Sci USA 84:4890-4894.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 4890-4894
-
-
Nilsson, G.1
Belasco, J.G.2
Cohen, S.N.3
Von Gabain, A.4
-
33
-
-
0018791193
-
A conditional lethal mutation in an Escherichia coli strain with a longer chemical lifetime of mRNA
-
Ono M, Kuwano M. 1979. A conditional lethal mutation in an Escherichia coli strain with a longer chemical lifetime of mRNA. J Mol Biol 129:343-357.
-
(1979)
J Mol Biol
, vol.129
, pp. 343-357
-
-
Ono, M.1
Kuwano, M.2
-
34
-
-
0003011967
-
Translation and mRNA stability in bacteria: A complex relationship
-
Belasco JG, Brawerman G, eds. San Diego: Academic Press
-
Petersen C. 1993. Translation and mRNA stability in bacteria: A complex relationship. In: Belasco JG, Brawerman G, eds. Control of messenger RNA stability. San Diego: Academic Press, pp 117-145.
-
(1993)
Control of Messenger RNA Stability
, pp. 117-145
-
-
Petersen, C.1
-
35
-
-
0029742167
-
The role of the AUU initiation codon in the negative feedback regulation of the gene for translation initiation factor IF3 in Escherichia coli
-
Sacerdot C, Chiaruttini C, Engst K, Graffe M, Milet M, Mathy N, Dondon J, Springer M. 1996. The role of the AUU initiation codon in the negative feedback regulation of the gene for translation initiation factor IF3 in Escherichia coli. Mol Microbiol 21:331-346.
-
(1996)
Mol Microbiol
, vol.21
, pp. 331-346
-
-
Sacerdot, C.1
Chiaruttini, C.2
Engst, K.3
Graffe, M.4
Milet, M.5
Mathy, N.6
Dondon, J.7
Springer, M.8
-
36
-
-
0029100233
-
Predicting thermodynamic properties of RNA
-
Serra MJ, Turner DH. 1995. Predicting thermodynamic properties of RNA. Methods Enzymol 259:243-261.
-
(1995)
Methods Enzymol
, vol.259
, pp. 243-261
-
-
Serra, M.J.1
Turner, D.H.2
-
37
-
-
0002250828
-
Translation initiation
-
Reznikoff W, Gold L, eds. Boston: Butterworths
-
Stormo GD. 1986. Translation initiation. In: Reznikoff W, Gold L, eds. Maximizing gene expression. Boston: Butterworths. pp 195-224.
-
(1986)
Maximizing Gene Expression
, pp. 195-224
-
-
Stormo, G.D.1
-
38
-
-
0020671323
-
Structure and functions of ribosomal protein S1
-
Subramanian AP. 1983. Structure and functions of ribosomal protein S1. Prog Nucleic Acid Res Mol Biol 28:101-142.
-
(1983)
Prog Nucleic Acid Res Mol Biol
, vol.28
, pp. 101-142
-
-
Subramanian, A.P.1
-
39
-
-
0029745401
-
Escherichia coli translation initiation factor 3 discriminates the initiation codon in vivo
-
Sussman JK, Simons EL, Simons RW. 1996. Escherichia coli translation initiation factor 3 discriminates the initiation codon in vivo. Mol Microbiol 21:347-360.
-
(1996)
Mol Microbiol
, vol.21
, pp. 347-360
-
-
Sussman, J.K.1
Simons, E.L.2
Simons, R.W.3
-
40
-
-
0025881986
-
The gene specifying RNase E (rne) and a gene affecting mRNA stability (ams) are the same gene
-
Taraseviciene L, Miczak A, Apirion D. 1991. The gene specifying RNase E (rne) and a gene affecting mRNA stability (ams) are the same gene. Mol Microbiol 5:851-855.
-
(1991)
Mol Microbiol
, vol.5
, pp. 851-855
-
-
Taraseviciene, L.1
Miczak, A.2
Apirion, D.3
-
41
-
-
0020698372
-
Decay of mRNA in Escherichia coli: Investigation of the fate of specific segments of transcripts
-
von Gabain A, Belasco JG, Schottel JL, Chang ACY, Cohen SN. 1983. Decay of mRNA in Escherichia coli: Investigation of the fate of specific segments of transcripts. Proc Natl Acad Sci USA 80:653-657.
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 653-657
-
-
Von Gabain, A.1
Belasco, J.G.2
Schottel, J.L.3
Chang, A.C.Y.4
Cohen, S.N.5
-
42
-
-
0028176680
-
An efficient Shine-Dalgarno sequence but not translation is necessary for lacZ mRNA stability in Escherichia coli
-
Wagner LA, Gesteland RF, Dayhuff TJ, Weiss RB. 1994. An efficient Shine-Dalgarno sequence but not translation is necessary for lacZ mRNA stability in Escherichia coli. J Bacteriol 176:1683-1688.
-
(1994)
J Bacteriol
, vol.176
, pp. 1683-1688
-
-
Wagner, L.A.1
Gesteland, R.F.2
Dayhuff, T.J.3
Weiss, R.B.4
-
43
-
-
0026663105
-
Interdependence of translation, transcription and mRNA degradation in the lacZ gene
-
Yarchuk O, Jacques N, Guillerez J, Dreyfus M. 1992. Interdependence of translation, transcription and mRNA degradation in the lacZ gene. J Mol Biol 226:581-596.
-
(1992)
J Mol Biol
, vol.226
, pp. 581-596
-
-
Yarchuk, O.1
Jacques, N.2
Guillerez, J.3
Dreyfus, M.4
-
44
-
-
0026509195
-
A uridine-rich sequence required for translation of prokaryotic mRNA
-
Zhang J, Deutscher MP. 1992. A uridine-rich sequence required for translation of prokaryotic mRNA. Proc Natl Acad Sci USA 89:2605-2609.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 2605-2609
-
-
Zhang, J.1
Deutscher, M.P.2
|