Recon3D enables a three-dimensional view of gene variation in human metabolism

Nature Biotechnology

Volumn 36, Issue 3, 2018, Pages 272-281

  Brunk, Elizabeth ^a,b   Sahoo, Swagatika ^c,k   Zielinski, Daniel C ^a   Altunkaya, Ali ^d,e   Dräger, Andreas ^f   Mih, Nathan ^a   Gatto, Francesco ^a,g   Nilsson, Avlant ^g   Preciat Gonzalez, German Andres ^c   Aurich, Maike Kathrin ^c   Prlic, Andreas ^d   Sastry, Anand ^a   Danielsdottir, Anna D ^c   Heinken, Almut ^c   Noronha, Alberto ^c   Rose, Peter W ^d   Burley, Stephen K ^d,h   Fleming, Ronan M T ^c,i   Nielsen, Jens ^b,g   Thiele, Ines ^c   Palsson, Bernhard O ^a,b,j   more..

^a UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

^b Chalmers University of Technology   (Denmark)

^c UNIVERSITY OF LUXEMBOURG   (Luxembourg)

^d UNIVERSITY OF CALIFORNIA   (United States)

^e Arizona State University   (United States)

^f UNIVERSITY OF TÜBINGEN   (Germany)

^g CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

^h RUTGERS CANCER INSTITUTE OF NEW JERSEY   (United States)

ⁱ LEIDEN UNIVERSITY   (Netherlands)

^j UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

^k INDIAN INSTITUTE OF TECHNOLOGY MADRAS   (India)

more..

Author keywords

[No Author keywords available]

Indexed keywords

GENES; METABOLITES; PHYSIOLOGY; PROTEINS;

COMPUTATIONAL RESOURCES; INTEGRATED ANALYSIS; METABOLIC NETWORK MODELS; METABOLIC REACTIONS; METABOLIC RESPONSE; MOLECULAR MECHANISM; NETWORK RECONSTRUCTION; THREEDIMENSIONAL (3-D);

METABOLISM;

ARYLSULFATASE; BRUTON TYROSINE KINASE; PROTEOME; STEROL REGULATORY ELEMENT BINDING PROTEIN 1;

ACAT1 GENE; ARTICLE; CARBOHYDRATE METABOLISM; CARCINOGENESIS; GENE DELETION; GENE KNOCKDOWN; GENE MAPPING; GENETIC ALGORITHM; GENETIC VARIATION; GLIOBLASTOMA; HUMAN; LIPID METABOLISM; METABOLISM; METABOLITE; METABOLOMICS; MISSENSE MUTATION; NUCLEOTIDE METABOLISM; ONCOGENE; OPEN READING FRAME; PHARMACOGENOMICS; PRIORITY JOURNAL; PROTEIN DATA BANK; PROTEIN DOMAIN; PROTEOMICS; SINGLE NUCLEOTIDE POLYMORPHISM; SOMATIC MUTATION; SQUAMOUS CELL LUNG CARCINOMA; SYSTEMS BIOLOGY; THREE DIMENSIONAL PRINTING; TRANSCRIPTOMICS; TUMOR-RELATED GENE; VITAMIN METABOLISM; BIOLOGY; GENETIC DATABASE; GENETICS; INTERNET; MOLECULAR GENETICS; PROCEDURES; PROTEIN DATABASE;

COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; DATABASES, PROTEIN; HUMANS; INTERNET; METABOLIC NETWORKS AND PATHWAYS; MOLECULAR SEQUENCE ANNOTATION; OPEN READING FRAMES;

EID: 85042916724     PISSN: 10870156     EISSN: 15461696     Source Type: Journal    
DOI: 10.1038/nbt.4072     Document Type: Article

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