메뉴 건너뛰기




Volumn 41, Issue 5, 2017, Pages 599-623

Biophysical processes supporting the diversity of microbial life in soil

Author keywords

Bacterial communities; Microbial ecology; Microbial interactions; Soil microbiology; Soil physics; Vadose zone

Indexed keywords

BIODIVERSITY; CLIMATE; ECOLOGY; HYDROLOGY; LAND USE; LANDSCAPE; MICROBIAL COMMUNITY; NONHUMAN; REVIEW; SOIL MICROFLORA; SOIL STRUCTURE; BIOPHYSICS; ECOSYSTEM; MICROBIOLOGY; MICROFLORA; PHYSIOLOGY;

EID: 85037679703     PISSN: 01686445     EISSN: 15746976     Source Type: Journal    
DOI: 10.1093/femsre/fux039     Document Type: Review
Times cited : (340)

References (324)
  • 1
    • 84945537929 scopus 로고    scopus 로고
    • A unified initiative to harness earth's microbiomes
    • Alivisatos AP, Blaser MJ, Brodie EL et al. A unified initiative to harness earth's microbiomes. Science 2015;350:507-8.
    • (2015) Science , vol.350 , pp. 507-508
    • Alivisatos, A.P.1    Blaser, M.J.2    Brodie, E.L.3
  • 2
    • 34547865736 scopus 로고    scopus 로고
    • Mycorrhizal fungi: Highways for water and nutrients in arid soils
    • Allen MF. Mycorrhizal fungi: highways for water and nutrients in arid soils. Vadose Zone J 2007;6:291-7.
    • (2007) Vadose Zone J , vol.6 , pp. 291-297
    • Allen, M.F.1
  • 3
    • 84977097744 scopus 로고    scopus 로고
    • Temperature sensitivity of soil microbial communities: An application of macromolecular rate theory to microbial respiration
    • Alster CJ, Koyama A, Johnson NG et al. Temperature sensitivity of soil microbial communities: An application of macromolecular rate theory to microbial respiration. J Geophys Res-Biogeo 2016;121:1420-33.
    • (2016) J Geophys Res-Biogeo , vol.121 , pp. 1420-1433
    • Alster, C.J.1    Koyama, A.2    Johnson, N.G.3
  • 4
    • 0031687474 scopus 로고    scopus 로고
    • Colonization of wheat roots by an exopolysaccharide-producing Pantoea agglomerans strain and its effect on rhizosphere soil aggregation
    • Amellal N, Burtin G, Bartoli F et al. Colonization of wheat roots by an exopolysaccharide-producing Pantoea agglomerans strain and its effect on rhizosphere soil aggregation. Appl Environ Microb 1998;64:3740-7.
    • (1998) Appl Environ Microb , vol.64 , pp. 3740-3747
    • Amellal, N.1    Burtin, G.2    Bartoli, F.3
  • 5
    • 84965060771 scopus 로고    scopus 로고
    • A latitudinal diversity gradient in terrestrial bacteria of the genus Streptomyces
    • Andam CP, Doroghazi JR, Campbell AN et al. A latitudinal diversity gradient in terrestrial bacteria of the genus Streptomyces. mBio 2016;7:e02200-15.
    • (2016) mBio , vol.7 , pp. e02200-e02215
    • Andam, C.P.1    Doroghazi, J.R.2    Campbell, A.N.3
  • 6
    • 70049087749 scopus 로고    scopus 로고
    • Gene transfer and diversification of microbial eukaryotes
    • Andersson JO. Gene transfer and diversification of microbial eukaryotes. Annu Rev Microbiol 2009;63:177-93.
    • (2009) Annu Rev Microbiol , vol.63 , pp. 177-193
    • Andersson, J.O.1
  • 7
    • 77950057025 scopus 로고    scopus 로고
    • Biogeography of soil archaea and bacteria along a steep precipitation gradient
    • Angel R, Soares MIM, Ungar ED et al. Biogeography of soil archaea and bacteria along a steep precipitation gradient. ISME J 2010;4:553-63.
    • (2010) ISME J , vol.4 , pp. 553-563
    • Angel, R.1    Soares, M.I.M.2    Ungar, E.D.3
  • 9
    • 0032076192 scopus 로고    scopus 로고
    • Microbial control of oceanic carbon flux: The plot thickens
    • Azam F. Microbial control of oceanic carbon flux: The plot thickens. Science 1998;280:694-6.
    • (1998) Science , vol.280 , pp. 694-696
    • Azam, F.1
  • 11
    • 84879259592 scopus 로고    scopus 로고
    • Micrometer-scale physical structure and microbial composition of soil macroaggregates
    • Bailey VL, McCue LA, Fansler SJ et al. Micrometer-scale physical structure and microbial composition of soil macroaggregates. Soil Biol Biochem 2013;65:60-8.
    • (2013) Soil Biol Biochem , vol.65 , pp. 60-68
    • Bailey, V.L.1    McCue, L.A.2    Fansler, S.J.3
  • 12
    • 80052329249 scopus 로고    scopus 로고
    • Dispersal networks for enhancing bacterial degradation in heterogeneous environments
    • Banitz T, Wick LY, Fetzer I et al. Dispersal networks for enhancing bacterial degradation in heterogeneous environments. Environ Pollut 2011;159:2781-8.
    • (2011) Environ Pollut , vol.159 , pp. 2781-2788
    • Banitz, T.1    Wick, L.Y.2    Fetzer, I.3
  • 13
    • 84923094743 scopus 로고    scopus 로고
    • Belowground biodiversity and ecosystem functioning
    • Bardgett RD, van der Putten WH. Belowground biodiversity and ecosystem functioning. Nature 2014;515:505-11.
    • (2014) Nature , vol.515 , pp. 505-511
    • Bardgett, R.D.1    Van Der Putten, W.H.2
  • 14
    • 84886729023 scopus 로고    scopus 로고
    • Responses of soil bacterial and fungal communities to extreme desiccation and rewetting
    • Barnard RL, Osborne CA, Firestone MK. Responses of soil bacterial and fungal communities to extreme desiccation and rewetting. ISME J 2013;7:2229-41.
    • (2013) ISME J , vol.7 , pp. 2229-2241
    • Barnard, R.L.1    Osborne, C.A.2    Firestone, M.K.3
  • 15
    • 0031553821 scopus 로고    scopus 로고
    • Mathematical model for characterization of bacterial migration through sand cores
    • Barton JW, Ford RM. Mathematical model for characterization of bacterial migration through sand cores. Biotechnol Bioeng 1997;53:487-96.
    • (1997) Biotechnol Bioeng , vol.53 , pp. 487-496
    • Barton, J.W.1    Ford, R.M.2
  • 16
    • 0001684748 scopus 로고
    • Horizontal and vertical movement of Azospirillum brasilense Cd in the soil and along the rhizosphere of wheat and weeds in controlled and field environments
    • Bashan Y, Levanony H. Horizontal and vertical movement of Azospirillum brasilense Cd in the soil and along the rhizosphere of wheat and weeds in controlled and field environments. Microbiology 1987;133:3473-80.
    • (1987) Microbiology , vol.133 , pp. 3473-3480
    • Bashan, Y.1    Levanony, H.2
  • 17
    • 84955652639 scopus 로고    scopus 로고
    • Succession, resource processing, and diversity in de-trital food webs
    • Wall DH ed Oxford: Oxford University Press
    • Bastow J. Succession, resource processing, and diversity in de-trital food webs. In: Wall DH (ed.) Soil Ecology and Ecosystem Services. Oxford: Oxford University Press, 2012, 117-35.
    • (2012) Soil Ecology and Ecosystem Services , pp. 117-135
    • Bastow, J.1
  • 18
    • 84876502208 scopus 로고    scopus 로고
    • Global biogeography of highly diverse protistan communities in soil
    • Bates ST, Clemente JC, Flores GE et al. Global biogeography of highly diverse protistan communities in soil. ISME J 2013;7:652-9.
    • (2013) ISME J , vol.7 , pp. 652-659
    • Bates, S.T.1    Clemente, J.C.2    Flores, G.E.3
  • 19
    • 0029186306 scopus 로고
    • The secret life of foliar bacterial pathogens on leaves
    • Beattie GA, Lindow SE. The secret life of foliar bacterial pathogens on leaves. Annu Rev Phytopathol 1995;33:145-72.
    • (1995) Annu Rev Phytopathol , vol.33 , pp. 145-172
    • Beattie, G.A.1    Lindow, S.E.2
  • 20
    • 0031858966 scopus 로고    scopus 로고
    • Percolation theory and network modeling applications in soil physics
    • Berkowitz B, Ewing RP. Percolation theory and network modeling applications in soil physics. Surv Geophys 1998;19:23-72.
    • (1998) Surv Geophys , vol.19 , pp. 23-72
    • Berkowitz, B.1    Ewing, R.P.2
  • 21
    • 84965050751 scopus 로고    scopus 로고
    • Exopolysaccharide mi-crochannels direct bacterial motility and organize multicel-lular behavior
    • Berleman JE, Zemla M, Remis JP et al. Exopolysaccharide mi-crochannels direct bacterial motility and organize multicel-lular behavior. ISME J 2016;10:2620-32.
    • (2016) ISME J , vol.10 , pp. 2620-2632
    • Berleman, J.E.1    Zemla, M.2    Remis, J.P.3
  • 22
    • 84992202521 scopus 로고    scopus 로고
    • Short-term microbial dynamics in a drinking water plant treating groundwater with occasional high microbial loads
    • Besmer MD, Hammes F. Short-term microbial dynamics in a drinking water plant treating groundwater with occasional high microbial loads. Water Res 2016;107:11-8.
    • (2016) Water Res , vol.107 , pp. 11-18
    • Besmer, M.D.1    Hammes, F.2
  • 23
    • 84925745898 scopus 로고    scopus 로고
    • Material properties of biofilms-key methods for understanding permeability and mechanics
    • Billings N, Birjiniuk A, Samad TS et al. Material properties of biofilms-key methods for understanding permeability and mechanics. Rep Prog Phys 2015;78:036601.
    • (2015) Rep Prog Phys , vol.78 , pp. 036601
    • Billings, N.1    Birjiniuk, A.2    Samad, T.S.3
  • 24
    • 84884569526 scopus 로고    scopus 로고
    • Active microorganisms in soil: Critical review of estimation criteria and approaches
    • Blagodatskaya E, Kuzyakov Y. Active microorganisms in soil: critical review of estimation criteria and approaches. Soil Biol Biochem 2013;67:192-211.
    • (2013) Soil Biol Biochem , vol.67 , pp. 192-211
    • Blagodatskaya, E.1    Kuzyakov, Y.2
  • 25
    • 84901262098 scopus 로고    scopus 로고
    • Bacterial community structure in soil microaggregates and on particulate organic matter fractions located outside or inside soil macroaggregates
    • Blaud A, Chevallier T, Virto I et al. Bacterial community structure in soil microaggregates and on particulate organic matter fractions located outside or inside soil macroaggregates. Pedobiologia 2014;57:191-4.
    • (2014) Pedobiologia , vol.57 , pp. 191-194
    • Blaud, A.1    Chevallier, T.2    Virto, I.3
  • 26
    • 0036078096 scopus 로고    scopus 로고
    • Surface and subsurface microbial biomass, community structure and metabolic activity as a function of soil depth and season
    • Blume E, Bischoff M, Reichert JM et al. Surface and subsurface microbial biomass, community structure and metabolic activity as a function of soil depth and season. Appl Soil Ecol 2002;20:171-81.
    • (2002) Appl Soil Ecol , vol.20 , pp. 171-181
    • Blume, E.1    Bischoff, M.2    Reichert, J.M.3
  • 27
    • 84879421585 scopus 로고    scopus 로고
    • The biogeography of microbial communities and ecosystem processes: Implications for soil and ecosystem models
    • Wall DH ed Oxford: Oxford University Press
    • Bradford MA, Fierer N. The biogeography of microbial communities and ecosystem processes: Implications for soil and ecosystem models. In: Wall DH (ed.) Soil Ecology and Ecosystem Services. Oxford: Oxford University Press, 2012, 189-200.
    • (2012) Soil Ecology and Ecosystem Services , pp. 189-200
    • Bradford, M.A.1    Fierer, N.2
  • 29
    • 84993965453 scopus 로고    scopus 로고
    • Genome reduction in an abundant and ubiquitous soil bacterium 'Candidatus Udeobacter copiosus'
    • Brewer T, Handley KM, Carini P et al. Genome reduction in an abundant and ubiquitous soil bacterium 'Candidatus Udeobacter copiosus'. Nat Microbiol 2016;2:16198.
    • (2016) Nat Microbiol , vol.2 , pp. 16198
    • Brewer, T.1    Handley, K.M.2    Carini, P.3
  • 30
    • 0033764695 scopus 로고    scopus 로고
    • Life at the oxic-anoxic interface: Microbial activities and adaptations
    • Brune A, Frenzel P, Cypionka H. Life at the oxic-anoxic interface: microbial activities and adaptations. FEMS Microbiol Rev 2000;24:691-710.
    • (2000) FEMS Microbiol Rev , vol.24 , pp. 691-710
    • Brune, A.1    Frenzel, P.2    Cypionka, H.3
  • 31
    • 84867377743 scopus 로고    scopus 로고
    • Ecosystem services provided by the soil biota
    • Wall DH ed Oxford: Oxford University Press
    • Brussaard L. Ecosystem services provided by the soil biota. In: Wall DH (ed.) Soil Ecology and Ecosystem Services. Oxford: Oxford University Press, 2012, 45-58.
    • (2012) Soil Ecology and Ecosystem Services , pp. 45-58
    • Brussaard, L.1
  • 32
    • 0034898780 scopus 로고    scopus 로고
    • The structure of microbial communities in soil and the lasting impact of cultivation
    • Buckley DH, Schmidt TM. The structure of microbial communities in soil and the lasting impact of cultivation. Microb Ecol 2001;42:11-21.
    • (2001) Microb Ecol , vol.42 , pp. 11-21
    • Buckley, D.H.1    Schmidt, T.M.2
  • 33
    • 0038009298 scopus 로고    scopus 로고
    • Diversity and dynamics of microbial communities in soils from agro-ecosystems
    • Buckley DH, Schmidt TM. Diversity and dynamics of microbial communities in soils from agro-ecosystems. Environ Microbiol 2003;5:441-52.
    • (2003) Environ Microbiol , vol.5 , pp. 441-452
    • Buckley, D.H.1    Schmidt, T.M.2
  • 34
    • 0035031808 scopus 로고    scopus 로고
    • Preferential flow paths: Biological 'hot spots' in soils
    • Bundt M, Widmer F, Pesaro M et al. Preferential flow paths: biological 'hot spots' in soils. Soil Biol Biochem 2001;33:729-38.
    • (2001) Soil Biol Biochem , vol.33 , pp. 729-738
    • Bundt, M.1    Widmer, F.2    Pesaro, M.3
  • 35
    • 84968562106 scopus 로고    scopus 로고
    • Soil pH, total phosphorus, climate and distance are the major factors influencing microbial activity at a regional spatial scale
    • Cao H, Chen R, Wang L et al. Soil pH, total phosphorus, climate and distance are the major factors influencing microbial activity at a regional spatial scale. Sci Rep 2016;6:25815.
    • (2016) Sci Rep , vol.6 , pp. 25815
    • Cao, H.1    Chen, R.2    Wang, L.3
  • 36
    • 84897929445 scopus 로고    scopus 로고
    • Scanning a microhabitat: Plant-microbe interactions revealed by confocal laser microscopy
    • Cardinale M. Scanning a microhabitat: plant-microbe interactions revealed by confocal laser microscopy. Front Microbiol 2014;5:94.
    • (2014) Front Microbiol , vol.5 , pp. 94
    • Cardinale, M.1
  • 37
    • 33750283857 scopus 로고    scopus 로고
    • Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility
    • Chain PSG, Denef VJ, Konstantinidis KT et al. Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility. P Natl Acad Sci USA 2006;103:15280-7.
    • (2006) P Natl Acad Sci USA , vol.103 , pp. 15280-15287
    • Chain, P.S.G.1    Denef, V.J.2    Konstantinidis, K.T.3
  • 38
    • 0027532832 scopus 로고
    • Clay-or sand-polysaccharide associations as models for the interface between micro-organisms and soil: Water related properties and microstructure
    • Chenu C. Clay-or sand-polysaccharide associations as models for the interface between micro-organisms and soil: water related properties and microstructure. Geoderma 1993;56:143-56.
    • (1993) Geoderma , vol.56 , pp. 143-156
    • Chenu, C.1
  • 39
    • 0011347612 scopus 로고
    • Extracellular polysaccharides: An interface between microorganisms and soil constituents
    • Huang et al. eds. Boca Raton, FL: CRC Press
    • Chenu C. Extracellular polysaccharides: an interface between microorganisms and soil constituents. In: Huang et al. (eds). Environmental Impact of Soil Component Interactions. Boca Raton, FL: CRC Press, 1995;1:217-33.
    • (1995) Environmental Impact of Soil Component Interactions , vol.1 , pp. 217-233
    • Chenu, C.1
  • 41
    • 0026359684 scopus 로고
    • Mechanical strength of clay minerals as influenced by an adsorbed polysaccharide
    • Chenu C, Guerif J. Mechanical strength of clay minerals as influenced by an adsorbed polysaccharide. Soil Sci Soc Am J 1991;55:1076-80.
    • (1991) Soil Sci Soc Am J , vol.55 , pp. 1076-1080
    • Chenu, C.1    Guerif, J.2
  • 42
    • 0035165136 scopus 로고    scopus 로고
    • Short-term changes in the spatial distribution of microorganisms in soil aggregates as affected by glucose addition
    • Chenu C, Hassink J, Bloem J. Short-term changes in the spatial distribution of microorganisms in soil aggregates as affected by glucose addition. Biol Fert Soils 2001;34:349-56.
    • (2001) Biol Fert Soils , vol.34 , pp. 349-356
    • Chenu, C.1    Hassink, J.2    Bloem, J.3
  • 43
    • 0030184164 scopus 로고    scopus 로고
    • Diffusion of glucose in microbial extracellular polysaccharide as affected by water potential
    • Chenu C, Roberson EB. Diffusion of glucose in microbial extracellular polysaccharide as affected by water potential. Soil Biol Biochem 1996;28:877-84.
    • (1996) Soil Biol Biochem , vol.28 , pp. 877-884
    • Chenu, C.1    Roberson, E.B.2
  • 44
  • 45
    • 0034467820 scopus 로고    scopus 로고
    • Biogeography and degree of endemicity of fluorescent pseudomonas strains in soil
    • Cho J-C, Tiedje JM. Biogeography and degree of endemicity of fluorescent pseudomonas strains in soil. Appl Environ Microb 2000;66:5448-56.
    • (2000) Appl Environ Microb , vol.66 , pp. 5448-5456
    • Cho, J.-C.1    Tiedje, J.M.2
  • 46
    • 78349260124 scopus 로고    scopus 로고
    • Soil bacterial diversity in the arctic is not fundamentally different from that found in other biomes
    • Chu H, Fierer N, Lauber CL et al. Soil bacterial diversity in the arctic is not fundamentally different from that found in other biomes. Environ Microbiol 2010;12:2998-3006.
    • (2010) Environ Microbiol , vol.12 , pp. 2998-3006
    • Chu, H.1    Fierer, N.2    Lauber, C.L.3
  • 47
    • 84969667913 scopus 로고    scopus 로고
    • Microbial interactions and community assembly at microscales
    • Cordero OX, Datta MS. Microbial interactions and community assembly at microscales. Curr Opin Microbiol 2016;31:227-34.
    • (2016) Curr Opin Microbiol , vol.31 , pp. 227-234
    • Cordero, O.X.1    Datta, M.S.2
  • 48
    • 76049094717 scopus 로고    scopus 로고
    • The impact of long-distance horizontal gene transfer on prokaryotic genome size
    • Cordero OX, Hogeweg P. The impact of long-distance horizontal gene transfer on prokaryotic genome size. P Natl Acad Sci USA 2009;106:21748-53.
    • (2009) P Natl Acad Sci USA , vol.106 , pp. 21748-21753
    • Cordero, O.X.1    Hogeweg, P.2
  • 49
    • 84955592209 scopus 로고    scopus 로고
    • Bacteria increase arid-land soil surface temperature through the production of sunscreens
    • Couradeau E, Karaoz U, Lim HC et al. Bacteria increase arid-land soil surface temperature through the production of sunscreens. Nat Commun 2016;7:10373.
    • (2016) Nat Commun , vol.7 , pp. 10373
    • Couradeau, E.1    Karaoz, U.2    Lim, H.C.3
  • 50
    • 0034626765 scopus 로고    scopus 로고
    • Acceleration of global warming due to carbon-cycle feedbacks in a coupled climate model
    • Cox PM, Betts RA, Jones CD et al. Acceleration of global warming due to carbon-cycle feedbacks in a coupled climate model. Nature 2000;408:184-7.
    • (2000) Nature , vol.408 , pp. 184-187
    • Cox, P.M.1    Betts, R.A.2    Jones, C.D.3
  • 51
    • 12344306608 scopus 로고    scopus 로고
    • Towards an evolutionary ecology of life in soil
    • Crawford JW, Harris JA, Ritz K et al. Towards an evolutionary ecology of life in soil. Trends Ecol Evol 2005;20:81-7.
    • (2005) Trends Ecol Evol , vol.20 , pp. 81-87
    • Crawford, J.W.1    Harris, J.A.2    Ritz, K.3
  • 52
    • 84868611858 scopus 로고    scopus 로고
    • Effect of rainfall-induced soil geochemistry dynamics on grassland soil microbial communities
    • Cruz-Martínez K, Rosling A, Zhang Y et al. Effect of rainfall-induced soil geochemistry dynamics on grassland soil microbial communities. Appl Environ Microb 2012;78:7587-95.
    • (2012) Appl Environ Microb , vol.78 , pp. 7587-7595
    • Cruz-Martínez, K.1    Rosling, A.2    Zhang, Y.3
  • 53
    • 67549086723 scopus 로고    scopus 로고
    • Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland
    • Cruz-Martinez K, Suttle KB, Brodie EL et al. Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland. ISME J 2009;3:738-44.
    • (2009) ISME J , vol.3 , pp. 738-744
    • Cruz-Martinez, K.1    Suttle, K.B.2    Brodie, E.L.3
  • 54
    • 23944487811 scopus 로고    scopus 로고
    • Exploring microbial diversity-a vast below
    • Curtis TP, Sloan WT. Exploring microbial diversity-a vast below. Science 2005;309:1331-3.
    • (2005) Science , vol.309 , pp. 1331-1333
    • Curtis, T.P.1    Sloan, W.T.2
  • 56
    • 23744460935 scopus 로고    scopus 로고
    • Living in a fungal world: Impact of fungi on soil bacterial niche development
    • de Boer W, Folman LB, Summerbell RC et al. Living in a fungal world: Impact of fungi on soil bacterial niche development. FEMS Microbiol Rev 2005;29:795-811.
    • (2005) FEMS Microbiol Rev , vol.29 , pp. 795-811
    • De Boer, W.1    Folman, L.B.2    Summerbell, R.C.3
  • 57
    • 84883408849 scopus 로고    scopus 로고
    • Soil food web properties explain ecosystem services across european land use systems
    • de Vries FT, Thébault E, Liiri M et al. Soil food web properties explain ecosystem services across european land use systems. P Natl Acad Sci USA 2013;110:14296-301.
    • (2013) P Natl Acad Sci USA , vol.110 , pp. 14296-14301
    • De Vries, F.T.1    Thébault, E.2    Liiri, M.3
  • 58
    • 84920680295 scopus 로고    scopus 로고
    • Fine scale spatial variability of microbial pesticide degradation in soil: Scales, controlling factors, and implications
    • Dechesne A, Badawi N, Aamand J et al. Fine scale spatial variability of microbial pesticide degradation in soil: Scales, controlling factors, and implications. Front Microbiol 2014; 5:667.
    • (2014) Front Microbiol , vol.5 , pp. 667
    • Dechesne, A.1    Badawi, N.2    Aamand, J.3
  • 59
    • 0242575008 scopus 로고    scopus 로고
    • A novel method for characterizing the microscale 3d spatial distribution of bacteria in soil
    • Dechesne A, Pallud C, Debouzie D et al. A novel method for characterizing the microscale 3d spatial distribution of bacteria in soil. Soil Biol Biochem 2003;35:1537-46.
    • (2003) Soil Biol Biochem , vol.35 , pp. 1537-1546
    • Dechesne, A.1    Pallud, C.2    Debouzie, D.3
  • 60
    • 79955557525 scopus 로고    scopus 로고
    • Spatial distribution of bacteria at the microscale in soil
    • Franklin RB, Mills AL eds Dordrecht: Springer Netherlands
    • Dechesne A, Pallud C, Grundmann GL. Spatial distribution of bacteria at the microscale in soil. In: Franklin RB, Mills AL (eds.) The Spatial Distribution of Microbes in the Environment. Dordrecht: Springer Netherlands, 2007, 87-107.
    • (2007) The Spatial Distribution of Microbes in The Environment , pp. 87-107
    • Dechesne, A.1    Pallud, C.2    Grundmann, G.L.3
  • 61
    • 77956274591 scopus 로고    scopus 로고
    • Hydration-controlled bacterial motility and dispersal on surfaces
    • Dechesne A, Wang G, Gülez G et al. Hydration-controlled bacterial motility and dispersal on surfaces. P Natl Acad Sci USA 2010;107:14369-72.
    • (2010) P Natl Acad Sci USA , vol.107 , pp. 14369-14372
    • Dechesne, A.1    Wang, G.2    Gülez, G.3
  • 62
    • 84980047854 scopus 로고    scopus 로고
    • Carbon content and climate variability drive global soil bacterial diversity patterns
    • Delgado-Baquerizo M, Maestre FT, Reich PB et al. Carbon content and climate variability drive global soil bacterial diversity patterns. Ecol Monogr 2016;86:373-90.
    • (2016) Ecol Monogr , vol.86 , pp. 373-390
    • Delgado-Baquerizo, M.1    Maestre, F.T.2    Reich, P.B.3
  • 63
    • 77957911794 scopus 로고    scopus 로고
    • Extreme views on prokaryote evolution
    • Dion Nau-tiyal CS eds Berlin, Heidelberg: Springer Berlin Heidelberg
    • Dion P. Extreme views on prokaryote evolution. In: Dion P, Nau-tiyal CS (eds.) Microbiology of Extreme Soils. Berlin, Heidelberg: Springer Berlin Heidelberg, 2008, 45-70.
    • (2008) Microbiology of Extreme Soils , pp. 45-70
    • Dion, P.1
  • 64
    • 84994718525 scopus 로고    scopus 로고
    • Synthetic microbial ecology and the dynamic interplay between microbial genotypes
    • Dolinšek J, Goldschmidt F, Johnson DR. Synthetic microbial ecology and the dynamic interplay between microbial genotypes. FEMS Microbiol Rev 2016;40:961-79.
    • (2016) FEMS Microbiol Rev , vol.40 , pp. 961-979
    • Dolinšek, J.1    Goldschmidt, F.2    Johnson, D.R.3
  • 65
    • 68149181762 scopus 로고    scopus 로고
    • Carbon respiration from subsurface peat accelerated by climate warming in the subarctic
    • Dorrepaal E, Toet S, van Logtestijn RSP et al. Carbon respiration from subsurface peat accelerated by climate warming in the subarctic. Nature 2009;460:616-9.
    • (2009) Nature , vol.460 , pp. 616-619
    • Dorrepaal, E.1    Toet, S.2    Van Logtestijn, R.S.P.3
  • 66
    • 84945562524 scopus 로고    scopus 로고
    • Create a global microbiome effort
    • Dubilier N, McFall-Ngai M, Zhao L. Create a global microbiome effort. Nature 2015;526:631-4.
    • (2015) Nature , vol.526 , pp. 631-634
    • Dubilier, N.1    McFall-Ngai, M.2    Zhao, L.3
  • 67
    • 77149148775 scopus 로고    scopus 로고
    • Relative roles of niche and neutral processes in structuring a soil microbial community
    • Dumbrell AJ, Nelson M, Helgason T et al. Relative roles of niche and neutral processes in structuring a soil microbial community. ISME J 2010;4:337-45.
    • (2010) ISME J , vol.4 , pp. 337-345
    • Dumbrell, A.J.1    Nelson, M.2    Helgason, T.3
  • 68
    • 84956815922 scopus 로고    scopus 로고
    • Hydration and diffusion processes shape microbial community organization and function in model soil aggregates
    • Ebrahimi A, Or D. Hydration and diffusion processes shape microbial community organization and function in model soil aggregates. Water Resour Res 2015;51:9804-27.
    • (2015) Water Resour Res , vol.51 , pp. 9804-9827
    • Ebrahimi, A.1    Or, D.2
  • 69
    • 85027953621 scopus 로고    scopus 로고
    • Microbial community dynamics in soil aggregates shape biogeochemical gas fluxes from soil profiles - Upscaling an aggregate biophysical model
    • Ebrahimi A, Or D. Microbial community dynamics in soil aggregates shape biogeochemical gas fluxes from soil profiles - upscaling an aggregate biophysical model. Global Change Biol 2016;22:3141-56.
    • (2016) Global Change Biol , vol.22 , pp. 3141-3156
    • Ebrahimi, A.1    Or, D.2
  • 70
    • 84919338030 scopus 로고    scopus 로고
    • Microbial dispersal in unsaturated porous media: Characteristics of motile bacterial cell motions in unsaturated angular pore networks
    • Ebrahimi AN, Or D. Microbial dispersal in unsaturated porous media: characteristics of motile bacterial cell motions in unsaturated angular pore networks. Water Resour Res 2014; 50:7406-29.
    • (2014) Water Resour Res , vol.50 , pp. 7406-7429
    • Ebrahimi, A.N.1    Or, D.2
  • 71
    • 43649096750 scopus 로고    scopus 로고
    • Detection of microorganisms in undisturbed soil by combining fluorescence in situ hybridization (FISH) and micropedological methods
    • Eickhorst T, Tippkoetter R. Detection of microorganisms in undisturbed soil by combining fluorescence in situ hybridization (FISH) and micropedological methods. Soil Biol Biochem 2008;40:1284-93.
    • (2008) Soil Biol Biochem , vol.40 , pp. 1284-1293
    • Eickhorst, T.1    Tippkoetter, R.2
  • 72
    • 84860647701 scopus 로고    scopus 로고
    • Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil
    • Eilers KG, Debenport S, Anderson S et al. Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil. Soil Biol Biochem 2012;50:58-65.
    • (2012) Soil Biol Biochem , vol.50 , pp. 58-65
    • Eilers, K.G.1    Debenport, S.2    Anderson, S.3
  • 73
    • 0035080079 scopus 로고    scopus 로고
    • Distribution with depth of protozoa, bacteria and fungi in soil profiles from three danish forest sites
    • Ekelund F, Rønn R, Christensen S. Distribution with depth of protozoa, bacteria and fungi in soil profiles from three danish forest sites. Soil Biol Biochem 2001;33:475-81.
    • (2001) Soil Biol Biochem , vol.33 , pp. 475-481
    • Ekelund, F.1    Rønn, R.2    Christensen, S.3
  • 75
    • 84930674869 scopus 로고    scopus 로고
    • Microscale heterogeneity explains experimental variability and non-linearity in soil organic matter mineralisation
    • Falconer RE, Battaia G, Schmidt S et al. Microscale heterogeneity explains experimental variability and non-linearity in soil organic matter mineralisation. PLoS One 2015;10:e0123774.
    • (2015) PLoS One , vol.10 , pp. e0123774
    • Falconer, R.E.1    Battaia, G.2    Schmidt, S.3
  • 76
    • 85038238322 scopus 로고    scopus 로고
    • 2015 13 July 2017, date last accessed
    • FAO. 2015 International year of soil, 2015. http://www.fao.org/soils (13 July 2017, date last accessed).
    • (2015) International Year of Soil
  • 77
    • 0037052487 scopus 로고    scopus 로고
    • Microbial behavior in a heterogeneous world
    • Fenchel T. Microbial behavior in a heterogeneous world. Science 2002;296:1068-71.
    • (2002) Science , vol.296 , pp. 1068-1071
    • Fenchel, T.1
  • 78
    • 33947236971 scopus 로고    scopus 로고
    • Toward an ecological classification of soil bacteria
    • Fierer N, Bradford MA, Jackson RB. Toward an ecological classification of soil bacteria. Ecology 2007;88:1354-64.
    • (2007) Ecology , vol.88 , pp. 1354-1364
    • Fierer, N.1    Bradford, M.A.2    Jackson, R.B.3
  • 79
    • 31444447130 scopus 로고    scopus 로고
    • The diversity and biogeography of soil bacterial communities
    • Fierer N, Jackson RB. The diversity and biogeography of soil bacterial communities. P Natl Acad Sci USA 2006;103:626-31.
    • (2006) P Natl Acad Sci USA , vol.103 , pp. 626-631
    • Fierer, N.1    Jackson, R.B.2
  • 80
    • 84887301559 scopus 로고    scopus 로고
    • Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States
    • Fierer N, Ladau J, Clemente JC et al. Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the united states. Science 2013;342:621-4.
    • (2013) Science , vol.342 , pp. 621-624
    • Fierer, N.1    Ladau, J.2    Clemente, J.C.3
  • 81
    • 84871826193 scopus 로고    scopus 로고
    • Cross-biome metagenomic anal-yses of soil microbial communities and their functional attributes
    • Fierer N, Leff JW, Adams BJ et al. Cross-biome metagenomic anal-yses of soil microbial communities and their functional attributes. P Natl Acad Sci USA 2012;109:21390-5.
    • (2012) P Natl Acad Sci USA , vol.109 , pp. 21390-21395
    • Fierer, N.1    Leff, J.W.2    Adams, B.J.3
  • 82
    • 79952751932 scopus 로고    scopus 로고
    • The generation and maintenance of diversity in microbial communities
    • Fierer N, Lennon JT. The generation and maintenance of diversity in microbial communities. Am J Bot 2011;98:439-48.
    • (2011) Am J Bot , vol.98 , pp. 439-448
    • Fierer, N.1    Lennon, J.T.2
  • 83
    • 0037227464 scopus 로고    scopus 로고
    • Variations in microbial community composition through two soil depth profiles
    • Fierer N, Schimel JP, Holden PA. Variations in microbial community composition through two soil depth profiles. Soil Biol Biochem 2003;35:167-76.
    • (2003) Soil Biol Biochem , vol.35 , pp. 167-176
    • Fierer, N.1    Schimel, J.P.2    Holden, P.A.3
  • 84
    • 70350074600 scopus 로고    scopus 로고
    • Global patterns in belowground communities
    • Fierer N, Strickland MS, Liptzin D et al. Global patterns in belowground communities. Ecol Lett 2009;12:1238-49.
    • (2009) Ecol Lett , vol.12 , pp. 1238-1249
    • Fierer, N.1    Strickland, M.S.2    Liptzin, D.3
  • 87
    • 0025919030 scopus 로고
    • Physical and chemical factors influencing transport of microorganisms through porous media
    • Fontes DE, Mills AL, Hornberger GM et al. Physical and chemical factors influencing transport of microorganisms through porous media. Appl Environ Microb 1991;57:2473-81.
    • (1991) Appl Environ Microb , vol.57 , pp. 2473-2481
    • Fontes, D.E.1    Mills, A.L.2    Hornberger, G.M.3
  • 88
    • 34250088572 scopus 로고
    • Microenvironments of soil microorganisms
    • Foster RC. Microenvironments of soil microorganisms. Biol Fert Soils 1988;6:189-203.
    • (1988) Biol Fert Soils , vol.6 , pp. 189-203
    • Foster, R.C.1
  • 89
    • 33745617402 scopus 로고    scopus 로고
    • Diversity and dispersal interactively affect predictability of ecosystem function
    • France KE, Duffy JE. Diversity and dispersal interactively affect predictability of ecosystem function. Nature 2006;441:1139-43.
    • (2006) Nature , vol.441 , pp. 1139-1143
    • France, K.E.1    Duffy, J.E.2
  • 90
    • 0037721460 scopus 로고    scopus 로고
    • Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern vir-ginia agricultural field
    • Franklin RB, Mills AL. Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern vir-ginia agricultural field. FEMS Microbiol Ecol 2003;44:335-46.
    • (2003) FEMS Microbiol Ecol , vol.44 , pp. 335-346
    • Franklin, R.B.1    Mills, A.L.2
  • 91
    • 51449115465 scopus 로고    scopus 로고
    • Distantly sampled soils carry few species in common
    • Fulthorpe RR, Roesch LFW, Riva A et al. Distantly sampled soils carry few species in common. ISME J 2008;2:901-10.
    • (2008) ISME J , vol.2 , pp. 901-910
    • Fulthorpe, R.R.1    Roesch, L.F.W.2    Riva, A.3
  • 92
    • 23944525404 scopus 로고    scopus 로고
    • Computational improvements reveal great bacterial diversity and high metal toxicity in soil
    • Gans J, Wolinsky M, Dunbar J. Computational improvements reveal great bacterial diversity and high metal toxicity in soil. Science 2005;309:1387-90.
    • (2005) Science , vol.309 , pp. 1387-1390
    • Gans, J.1    Wolinsky, M.2    Dunbar, J.3
  • 93
    • 33645982883 scopus 로고    scopus 로고
    • In situ quantitation of the spatial scale of calling distances and population density-independent n-acylhomoserine lactone-mediated communication by rhizobacteria colonized on plant roots
    • Gantner S, Schmid M, Dürr C et al. In situ quantitation of the spatial scale of calling distances and population density-independent n-acylhomoserine lactone-mediated communication by rhizobacteria colonized on plant roots. FEMS Microbiol Ecol 2006;56:188-94.
    • (2006) FEMS Microbiol Ecol , vol.56 , pp. 188-194
    • Gantner, S.1    Schmid, M.2    Dürr, C.3
  • 94
    • 84879615109 scopus 로고    scopus 로고
    • Temperature drives the continental-scale distribution of key microbes in topsoil communities
    • Garcia-Pichel F, Loza V, Marusenko Y et al. Temperature drives the continental-scale distribution of key microbes in topsoil communities. Science 2013;340:1574-7.
    • (2013) Science , vol.340 , pp. 1574-1577
    • Garcia-Pichel, F.1    Loza, V.2    Marusenko, Y.3
  • 95
    • 84906829581 scopus 로고    scopus 로고
    • The earth microbiome project: Successes and aspirations
    • Gilbert JA, Jansson JK, Knight R. The earth microbiome project: successes and aspirations. BMC Biol 2014;12:1-4.
    • (2014) BMC Biol , vol.12 , pp. 1-4
    • Gilbert, J.A.1    Jansson, J.K.2    Knight, R.3
  • 96
    • 80053569422 scopus 로고    scopus 로고
    • Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance
    • Goldfarb K, Karaoz U, Hanson C et al. Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance. Front Microbiol 2011;2:94.
    • (2011) Front Microbiol , vol.2 , pp. 94
    • Goldfarb, K.1    Karaoz, U.2    Hanson, C.3
  • 97
    • 33750970282 scopus 로고    scopus 로고
    • 2,4-D impact on bacterial communities, and the activity and genetic potential of 2,4-D degrading communities in soil
    • Gonod LV, Martin-Laurent F, Chenu C. 2,4-D impact on bacterial communities, and the activity and genetic potential of 2,4-D degrading communities in soil. FEMS Microbiol Ecol 2006;58:529-37.
    • (2006) FEMS Microbiol Ecol , vol.58 , pp. 529-537
    • Gonod, L.V.1    Martin-Laurent, F.2    Chenu, C.3
  • 98
    • 84861706210 scopus 로고    scopus 로고
    • Weathering and the global carbon cycle: Ge-omorphological perspectives
    • Goudie AS, Viles HA. Weathering and the global carbon cycle: Ge-omorphological perspectives. Earth-Sci Rev 2012;113:59-71.
    • (2012) Earth-Sci Rev , vol.113 , pp. 59-71
    • Goudie, A.S.1    Viles, H.A.2
  • 99
    • 85101946644 scopus 로고
    • Water potential as a selective factor in the microbial ecology of soils
    • Parr JF, Gardner WR, Elliott LF eds. Madison: Soil Science Society of America
    • Griffin DM. Water potential as a selective factor in the microbial ecology of soils. In: Parr JF, Gardner WR, Elliott LF (eds). Water Potential Relations in Soil Microbiology. Madison: Soil Science Society of America, 1981, 141-51.
    • (1981) Water Potential Relations in Soil Microbiology , pp. 141-151
    • Griffin, D.M.1
  • 100
    • 62149140210 scopus 로고    scopus 로고
    • Challenges to incorporating spatially and temporally explicit phenomena (hotspots and hot moments) in denitrification models
    • Groffman PM, Butterbach-Bahl K, Fulweiler RW et al. Challenges to incorporating spatially and temporally explicit phenomena (hotspots and hot moments) in denitrification models. Biogeochemistry 2009;93:49-77.
    • (2009) Biogeochemistry , vol.93 , pp. 49-77
    • Groffman, P.M.1    Butterbach-Bahl, K.2    Fulweiler, R.W.3
  • 101
    • 0033780249 scopus 로고    scopus 로고
    • Geostatistical analysis of the distribution of nh4 and no2 oxidizing bacteria and serotypes at the millimeter scale along a soil transect
    • Grundmann GL, Debouzie D. Geostatistical analysis of the distribution of nh4 and no2 oxidizing bacteria and serotypes at the millimeter scale along a soil transect. FEMS Microbiol Ecol 2000;34:57-62.
    • (2000) FEMS Microbiol Ecol , vol.34 , pp. 57-62
    • Grundmann, G.L.1    Debouzie, D.2
  • 102
    • 84861967744 scopus 로고    scopus 로고
    • Metabolically versatile large-genome prokaryotes
    • Guieysse B, Wuertz S. Metabolically versatile large-genome prokaryotes. Curr Opin Biotechnol 2012;23:467-73.
    • (2012) Curr Opin Biotechnol , vol.23 , pp. 467-473
    • Guieysse, B.1    Wuertz, S.2
  • 103
    • 84911874980 scopus 로고    scopus 로고
    • Soil aggregation: Influence on microbial biomass and implications for biological processes
    • Gupta VV, Germida JJ. Soil aggregation: influence on microbial biomass and implications for biological processes. Soil Biol Biochem 2015;80:A3-9.
    • (2015) Soil Biol Biochem , vol.80 , pp. A3-A9
    • Gupta, V.V.1    Germida, J.J.2
  • 104
    • 0034281569 scopus 로고    scopus 로고
    • Release of intracellular solutes by four soil bacteria exposed to dilution stress
    • Halverson LJ, Jones TM, Firestone MK. Release of intracellular solutes by four soil bacteria exposed to dilution stress. Soil Sci Soc Am J 2000;64:1630-7.
    • (2000) Soil Sci Soc Am J , vol.64 , pp. 1630-1637
    • Halverson, L.J.1    Jones, T.M.2    Firestone, M.K.3
  • 105
    • 84880130007 scopus 로고    scopus 로고
    • Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu
    • Han K, Li Z-F, Peng R et al. Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu. Sci Rep 2013;3:2101.
    • (2013) Sci Rep , vol.3 , pp. 2101
    • Han, K.1    Li, Z.-F.2    Peng, R.3
  • 106
    • 55149112381 scopus 로고    scopus 로고
    • Fungal taxa target different carbon sources in forest soil
    • Hanson CA, Allison SD, Bradford MA et al. Fungal taxa target different carbon sources in forest soil. Ecosystems 2008;11:1157-67.
    • (2008) Ecosystems , vol.11 , pp. 1157-1167
    • Hanson, C.A.1    Allison, S.D.2    Bradford, M.A.3
  • 107
    • 84862499239 scopus 로고    scopus 로고
    • Beyond biogeographic patterns: Processes shaping the microbial landscape
    • Hanson CA, Fuhrman JA, Horner-Devine MC et al. Beyond biogeographic patterns: Processes shaping the microbial landscape. Nat Rev Microbiol 2012;10:497-506.
    • (2012) Nat Rev Microbiol , vol.10 , pp. 497-506
    • Hanson, C.A.1    Fuhrman, J.A.2    Horner-Devine, M.C.3
  • 108
    • 84945895420 scopus 로고    scopus 로고
    • Three-dimensional mapping of soil chemical characteristics at micrometric scale by combining 2D SEM-EDX data and 3D X-Ray CT images
    • Hapca S, Baveye PC, Wilson C et al. Three-dimensional mapping of soil chemical characteristics at micrometric scale by combining 2D SEM-EDX data and 3D X-Ray CT images. PLoS One 2015;10:e0137205.
    • (2015) PLoS One , vol.10 , pp. e0137205
    • Hapca, S.1    Baveye, P.C.2    Wilson, C.3
  • 109
    • 84901273253 scopus 로고    scopus 로고
    • Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics
    • Harcombe WR, Riehl WJ, Dukovski I et al. Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics. Cell Rep 2014;7:1104-15.
    • (2014) Cell Rep , vol.7 , pp. 1104-1115
    • Harcombe, W.R.1    Riehl, W.J.2    Dukovski, I.3
  • 110
    • 0030727131 scopus 로고    scopus 로고
    • Mass transfer limitation of microbial growth and pollutant degradation
    • Harms H, Bosma T. Mass transfer limitation of microbial growth and pollutant degradation. J Ind Microbiol Biot 1997;18:97-105.
    • (1997) J Ind Microbiol Biot , vol.18 , pp. 97-105
    • Harms, H.1    Bosma, T.2
  • 111
    • 33746093311 scopus 로고    scopus 로고
    • Dispersing pollutant-degrading bacteria in contaminated soil without touching it
    • Harms H, Wick L. Dispersing pollutant-degrading bacteria in contaminated soil without touching it. Eng Life Sci 2006;6:252-60.
    • (2006) Eng Life Sci , vol.6 , pp. 252-260
    • Harms, H.1    Wick, L.2
  • 112
    • 0242609023 scopus 로고    scopus 로고
    • Bacterial motility on a surface: Many ways to a common goal
    • Harshey RM. Bacterial motility on a surface: Many ways to a common goal. Annu Rev Microbiol 2003;57:249-73.
    • (2003) Annu Rev Microbiol , vol.57 , pp. 249-273
    • Harshey, R.M.1
  • 113
    • 71249160545 scopus 로고    scopus 로고
    • Bacterial, archaeal and eu-karyal community structures throughout soil horizons of harvested and naturally disturbed forest stands
    • Hartmann M, Lee S, Hallam SJ et al. Bacterial, archaeal and eu-karyal community structures throughout soil horizons of harvested and naturally disturbed forest stands. Environ Microbiol 2009;11:3045-62.
    • (2009) Environ Microbiol , vol.11 , pp. 3045-3062
    • Hartmann, M.1    Lee, S.2    Hallam, S.J.3
  • 114
    • 0028992831 scopus 로고
    • Survival of bacteria introduced into soil by means of transport by Lumbricus rubellus
    • Heijnen CE, Marinissen JCY. Survival of bacteria introduced into soil by means of transport by Lumbricus rubellus. Biol Fert Soils 1995;20:63-9.
    • (1995) Biol Fert Soils , vol.20 , pp. 63-69
    • Heijnen, C.E.1    Marinissen, J.C.Y.2
  • 115
    • 84941119526 scopus 로고    scopus 로고
    • Soil particle size fractions harbour distinct microbial communities and differ in potential for microbial mineralisation of organic pollutants
    • Hemkemeyer M, Christensen BT, Martens R et al. Soil particle size fractions harbour distinct microbial communities and differ in potential for microbial mineralisation of organic pollutants. Soil Biol Biochem 2015;90:255-65.
    • (2015) Soil Biol Biochem , vol.90 , pp. 255-265
    • Hemkemeyer, M.1    Christensen, B.T.2    Martens, R.3
  • 116
    • 84866919992 scopus 로고    scopus 로고
    • Plasmids foster diversification and adaptation of bacterial populations in soil
    • Heuer H, Smalla K. Plasmids foster diversification and adaptation of bacterial populations in soil. FEMS Microbiol Rev 2012;36:1083-104.
    • (2012) FEMS Microbiol Rev , vol.36 , pp. 1083-1104
    • Heuer, H.1    Smalla, K.2
  • 118
    • 67650997589 scopus 로고    scopus 로고
    • Rhizosphere: Biophysics, biogeochemistry and ecological relevance
    • Hinsinger P, Bengough AG, Vetterlein D et al. Rhizosphere: biophysics, biogeochemistry and ecological relevance. Plant Soil 2009;321:117-52.
    • (2009) Plant Soil , vol.321 , pp. 117-152
    • Hinsinger, P.1    Bengough, A.G.2    Vetterlein, D.3
  • 120
    • 38249000395 scopus 로고
    • Active movement of chickpea and bean rhizobia in dry soil
    • Issa S, Wood M, Simmonds LP. Active movement of chickpea and bean rhizobia in dry soil. Soil Biol Biochem 1993;25:951-8.
    • (1993) Soil Biol Biochem , vol.25 , pp. 951-958
    • Issa, S.1    Wood, M.2    Simmonds, L.P.3
  • 121
    • 0030601481 scopus 로고    scopus 로고
    • Capillary condensation and adhesion of two wetter surfaces
    • Iwamatsu M, Horii K. Capillary condensation and adhesion of two wetter surfaces. J Colloid Interf Sci 1996;182:400-6.
    • (1996) J Colloid Interf Sci , vol.182 , pp. 400-406
    • Iwamatsu, M.1    Horii, K.2
  • 122
    • 53649103674 scopus 로고    scopus 로고
    • Relative impacts of land-use, management intensity and fertilization upon soil microbial community structure in agricultural systems
    • Jangid K, Williams MA, Franzluebbers AJ et al. Relative impacts of land-use, management intensity and fertilization upon soil microbial community structure in agricultural systems. Soil Biol Biochem 2008;40:2843-53.
    • (2008) Soil Biol Biochem , vol.40 , pp. 2843-2853
    • Jangid, K.1    Williams, M.A.2    Franzluebbers, A.J.3
  • 123
    • 80051672001 scopus 로고    scopus 로고
    • Land-use history has a stronger impact on soil microbial community composition than aboveground vegetation and soil properties
    • Jangid K, Williams MA, Franzluebbers AJ et al. Land-use history has a stronger impact on soil microbial community composition than aboveground vegetation and soil properties. Soil Biol Biochem 2011;43:2184-93.
    • (2011) Soil Biol Biochem , vol.43 , pp. 2184-2193
    • Jangid, K.1    Williams, M.A.2    Franzluebbers, A.J.3
  • 124
    • 33644952722 scopus 로고    scopus 로고
    • Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes
    • Janssen PH. Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl Environ Microb 2006;72:1719-28.
    • (2006) Appl Environ Microb , vol.72 , pp. 1719-1728
    • Janssen, P.H.1
  • 125
    • 77956081699 scopus 로고    scopus 로고
    • Stewards of a changing planet: Commentaries from ISME 13 plenary lecturers
    • Jansson JK, Fredrickson JK. Stewards of a changing planet: commentaries from ISME 13 plenary lecturers. ISME J 2010;4:1079-80.
    • (2010) ISME J , vol.4 , pp. 1079-1080
    • Jansson, J.K.1    Fredrickson, J.K.2
  • 126
    • 43849084346 scopus 로고    scopus 로고
    • The surprisingly diverse ways that prokaryotes move
    • Jarrell KF, McBride MJ. The surprisingly diverse ways that prokaryotes move. Nat Rev Microbiol 2008;6:466-76.
    • (2008) Nat Rev Microbiol , vol.6 , pp. 466-476
    • Jarrell, K.F.1    McBride, M.J.2
  • 127
    • 18144363199 scopus 로고    scopus 로고
    • Isolation and identification of an EPS-producing Rhizobium strain from arid soil (Algeria): Characterization of its EPS and the effect of inoculation on wheat rhizosphere soil structure
    • Kaci Y, Heyraud A, Barakat M et al. Isolation and identification of an EPS-producing Rhizobium strain from arid soil (Algeria): characterization of its EPS and the effect of inoculation on wheat rhizosphere soil structure. Res Microbiol 2005;156:522-31.
    • (2005) Res Microbiol , vol.156 , pp. 522-531
    • Kaci, Y.1    Heyraud, A.2    Barakat, M.3
  • 128
    • 84947470193 scopus 로고    scopus 로고
    • Social dynamics within de-composer communities lead to nitrogen retention and organic matter build-up in soils
    • Kaiser C, Franklin O, Richter A et al. Social dynamics within de-composer communities lead to nitrogen retention and organic matter build-up in soils. Nat Commun 2015;6:9960.
    • (2015) Nat Commun , vol.6 , pp. 9960
    • Kaiser, C.1    Franklin, O.2    Richter, A.3
  • 129
    • 0000416929 scopus 로고
    • Distribution of microorganisms, total biomass, and enzyme activities in different particles of brown soil
    • Kanazawa S, Filip Z. Distribution of microorganisms, total biomass, and enzyme activities in different particles of brown soil. Microb Ecol 1986;12:205-15.
    • (1986) Microb Ecol , vol.12 , pp. 205-215
    • Kanazawa, S.1    Filip, Z.2
  • 130
    • 84907221036 scopus 로고    scopus 로고
    • Temperature sensitivity of soil respiration rates enhanced by microbial community response
    • Karhu K, Auffret MD, Dungait JA et al. Temperature sensitivity of soil respiration rates enhanced by microbial community response. Nature 2014;513:81-4.
    • (2014) Nature , vol.513 , pp. 81-84
    • Karhu, K.1    Auffret, M.D.2    Dungait, J.A.3
  • 131
    • 79960768353 scopus 로고    scopus 로고
    • Influence of land-use intensity on the spatial distribution of n-cycling microorganisms in grassland soils
    • Keil D, Meyer A, Berner D et al. Influence of land-use intensity on the spatial distribution of n-cycling microorganisms in grassland soils. FEMS Microbiol Ecol 2011;77:95-106.
    • (2011) FEMS Microbiol Ecol , vol.77 , pp. 95-106
    • Keil, D.1    Meyer, A.2    Berner, D.3
  • 132
    • 4644283131 scopus 로고    scopus 로고
    • Impact of lime, nitrogen and plant species on bacterial community structure in grassland microcosms
    • Kennedy N, Brodie E, Connolly J et al. Impact of lime, nitrogen and plant species on bacterial community structure in grassland microcosms. Environ Microbiol 2004;6:1070-80.
    • (2004) Environ Microbiol , vol.6 , pp. 1070-1080
    • Kennedy, N.1    Brodie, E.2    Connolly, J.3
  • 133
    • 33749508695 scopus 로고    scopus 로고
    • Seasonal influences on fungal community structure in unimproved and improved upland grassland soils
    • Kennedy N, Brodie E, Connolly J et al. Seasonal influences on fungal community structure in unimproved and improved upland grassland soils. Can J Microbiol 2006;52:689-94.
    • (2006) Can J Microbiol , vol.52 , pp. 689-694
    • Kennedy, N.1    Brodie, E.2    Connolly, J.3
  • 134
    • 0037062936 scopus 로고    scopus 로고
    • Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors
    • Kerr B, Riley MA, Feldman MW et al. Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors. Nature 2002;418:171-4.
    • (2002) Nature , vol.418 , pp. 171-174
    • Kerr, B.1    Riley, M.A.2    Feldman, M.W.3
  • 135
    • 84930181301 scopus 로고    scopus 로고
    • Biochar effects on soil aggregate properties under no-till maize
    • Khademalrasoul A, Naveed M, Heckrath G et al. Biochar effects on soil aggregate properties under no-till maize. Soil Sci 2014;179:273-83.
    • (2014) Soil Sci , vol.179 , pp. 273-283
    • Khademalrasoul, A.1    Naveed, M.2    Heckrath, G.3
  • 136
    • 84942521851 scopus 로고    scopus 로고
    • The spatial distribution of ex-oenzyme activities across the soil micro-landscape, as measured in micro- And macro-aggregates, and ecosystem processes
    • Kim H, Nunan N, Dechesne A et al. The spatial distribution of ex-oenzyme activities across the soil micro-landscape, as measured in micro- and macro-aggregates, and ecosystem processes. Soil Biol Biochem 2015;91:258-67.
    • (2015) Soil Biol Biochem , vol.91 , pp. 258-267
    • Kim, H.1    Nunan, N.2    Dechesne, A.3
  • 137
    • 84979876950 scopus 로고    scopus 로고
    • Individual-based model of microbial life on hydrated rough soil surfaces
    • Kim M, Or D. Individual-based model of microbial life on hydrated rough soil surfaces. PLoS One 2016;11:e0147394.
    • (2016) PLoS One , vol.11 , pp. e0147394
    • Kim, M.1    Or, D.2
  • 138
  • 139
    • 84925158873 scopus 로고    scopus 로고
    • Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community
    • Klumper U, Riber L, Dechesne A et al. Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community. ISME J 2015;9:934-45.
    • (2015) ISME J , vol.9 , pp. 934-945
    • Klumper, U.1    Riber, L.2    Dechesne, A.3
  • 140
    • 0002885230 scopus 로고
    • Diffusion the crucial process in many aspects of the biology of bacteria
    • Marshall KC ed. Boston, MA: Springer
    • Koch AL. Diffusion the crucial process in many aspects of the biology of bacteria. In: Marshall KC (ed). Advances in Microbial Ecology. Boston, MA: Springer, 1990, 37-70.
    • (1990) Advances in Microbial Ecology , pp. 37-70
    • Koch, A.L.1
  • 141
    • 20744445172 scopus 로고    scopus 로고
    • Taking the fungal highway: Mobilization of pollutant-degrading bacteria by fungi
    • Kohlmeier S, Smits THM, Ford RM et al. Taking the fungal highway: mobilization of pollutant-degrading bacteria by fungi. Environ Sci Technol 2005;39:4640-6.
    • (2005) Environ Sci Technol , vol.39 , pp. 4640-4646
    • Kohlmeier, S.1    Smits, T.H.M.2    Ford, R.M.3
  • 142
    • 84932194594 scopus 로고    scopus 로고
    • Dynamics in microbial communities: Unraveling mechanisms to identify principles
    • Konopka A, Lindemann S, Fredrickson J. Dynamics in microbial communities: unraveling mechanisms to identify principles. ISME J 2015;9:1488-95.
    • (2015) ISME J , vol.9 , pp. 1488-1495
    • Konopka, A.1    Lindemann, S.2    Fredrickson, J.3
  • 143
    • 57149085868 scopus 로고    scopus 로고
    • Genomics of bacteria and archaea: The emerging dynamic view of the prokaryotic world
    • Koonin EV, Wolf YI. Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world. Nucleic Acids Res 2008;36:6688-719.
    • (2008) Nucleic Acids Res , vol.36 , pp. 6688-6719
    • Koonin, E.V.1    Wolf, Y.I.2
  • 144
    • 0036418046 scopus 로고    scopus 로고
    • Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms
    • Kowalchuk GA, Buma DS, de Boer W et al. Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms. Anton Leeuw 2002;81:509-20.
    • (2002) Anton Leeuw , vol.81 , pp. 509-520
    • Kowalchuk, G.A.1    Buma, D.S.2    De Boer, W.3
  • 145
    • 85028265111 scopus 로고    scopus 로고
    • The biogeography of kin discrimination across microbial neighbourhoods
    • Kraemer SA, Wielgoss S, Fiegna F et al. The biogeography of kin discrimination across microbial neighbourhoods. Mol Ecol 2016;25:4875-88.
    • (2016) Mol Ecol , vol.25 , pp. 4875-4888
    • Kraemer, S.A.1    Wielgoss, S.2    Fiegna, F.3
  • 146
    • 84909993213 scopus 로고    scopus 로고
    • Intra-aggregate pore structure influences phylogenetic composition of bacterial community in macroaggregates
    • Kravchenko AN, Negassa WC, Guber AK et al. Intra-aggregate pore structure influences phylogenetic composition of bacterial community in macroaggregates. Soil Sci Soc Am J 2014;78:1924-39.
    • (2014) Soil Sci Soc Am J , vol.78 , pp. 1924-1939
    • Kravchenko, A.N.1    Negassa, W.C.2    Guber, A.K.3
  • 147
    • 84887289464 scopus 로고    scopus 로고
    • Mighty small: Observing and modeling of individual microbes becomes big science
    • Kreft JU, Plugge CM, Grimm V et al. Mighty small: observing and modeling of individual microbes becomes big science. P Natl Acad Sci USA 2013;110:18027-8.
    • (2013) P Natl Acad Sci USA , vol.110 , pp. 18027-18028
    • Kreft, J.U.1    Plugge, C.M.2    Grimm, V.3
  • 148
    • 79951681955 scopus 로고    scopus 로고
    • Long-term plant growth legacies overwhelm short-term plant growth effects on soil microbial community structure
    • Kulmatiski A, Beard KH. Long-term plant growth legacies overwhelm short-term plant growth effects on soil microbial community structure. Soil Biol Biochem 2011;43:823-30.
    • (2011) Soil Biol Biochem , vol.43 , pp. 823-830
    • Kulmatiski, A.1    Beard, K.H.2
  • 149
    • 83455242896 scopus 로고    scopus 로고
    • Soil characteristics more strongly influence soil bacterial communities than land-use type
    • Kuramae EE, Yergeau E, Wong LC et al. Soil characteristics more strongly influence soil bacterial communities than land-use type. FEMS Microbiol Ecol 2012;79:12-24.
    • (2012) FEMS Microbiol Ecol , vol.79 , pp. 12-24
    • Kuramae, E.E.1    Yergeau, E.2    Wong, L.C.3
  • 150
    • 84923261882 scopus 로고    scopus 로고
    • Microbial hotspots and hot moments in soil: Concept and review
    • Kuzyakov Y, Blagodatskaya E. Microbial hotspots and hot moments in soil: concept and review. Soil Biol Biochem 2015;83:184-99.
    • (2015) Soil Biol Biochem , vol.83 , pp. 184-199
    • Kuzyakov, Y.1    Blagodatskaya, E.2
  • 151
    • 84925517557 scopus 로고    scopus 로고
    • Insights from 20 years of bacterial genome sequencing
    • Land M, Hauser L, Jun S-R et al. Insights from 20 years of bacterial genome sequencing. Funct Int Genom 2015;15:141-61.
    • (2015) Funct Int Genom , vol.15 , pp. 141-161
    • Land, M.1    Hauser, L.2    Jun, S.-R.3
  • 152
    • 67651247607 scopus 로고    scopus 로고
    • Pyrosequencing-based assessment of soil ph as a predictor of soil bacterial community structure at the continental scale
    • Lauber CL, Hamady M, Knight R et al. Pyrosequencing-based assessment of soil ph as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microb 2009;75:5111-20.
    • (2009) Appl Environ Microb , vol.75 , pp. 5111-5120
    • Lauber, C.L.1    Hamady, M.2    Knight, R.3
  • 153
    • 84880917665 scopus 로고    scopus 로고
    • Temporal variability in soil microbial communities across land-use types
    • Lauber CL, Ramirez KS, Aanderud Z et al. Temporal variability in soil microbial communities across land-use types. ISME J 2013;7:1641-50.
    • (2013) ISME J , vol.7 , pp. 1641-1650
    • Lauber, C.L.1    Ramirez, K.S.2    Aanderud, Z.3
  • 154
    • 84870700026 scopus 로고    scopus 로고
    • Soil as a habitat
    • Wall DH ed Oxford, UK: Oxford University Press
    • Lavelle P. Soil as a habitat. In: Wall DH (ed.) Soil Ecology and Ecosystem Services. Oxford, UK: Oxford University Press, 2012, 7-21.
    • (2012) Soil Ecology and Ecosystem Services , pp. 7-21
    • Lavelle, P.1
  • 155
    • 4143143421 scopus 로고
    • Spread of plant pathogenic bacteria with fungal hyphae
    • Leben C. Spread of plant pathogenic bacteria with fungal hyphae. Phytopathology 1984;74:983-6.
    • (1984) Phytopathology , vol.74 , pp. 983-986
    • Leben, C.1
  • 156
    • 51649102702 scopus 로고    scopus 로고
    • Microbial distributions and their potential controlling factors in terrestrial subsurface environments
    • Franklin RB, Mills AL eds Berlin, Germany: Springer
    • Lehman RM. Microbial distributions and their potential controlling factors in terrestrial subsurface environments. In: Franklin RB, Mills AL (eds.) The Spatial Distribution of Microbes in the Environment. Berlin, Germany: Springer, 2007, 135-78.
    • (2007) The Spatial Distribution of Microbes in The Environment , pp. 135-178
    • Lehman, R.M.1
  • 157
    • 78651511845 scopus 로고    scopus 로고
    • Microbial seed banks: The ecological and evolutionary implications of dormancy
    • Lennon JT, Jones SE. Microbial seed banks: the ecological and evolutionary implications of dormancy. Nat Rev Microbiol 2011;9:119-30.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 119-130
    • Lennon, J.T.1    Jones, S.E.2
  • 158
    • 80053595263 scopus 로고    scopus 로고
    • The importance of dispersal for bacterial community composition and functioning
    • Lindström ES, Östman Ö. The importance of dispersal for bacterial community composition and functioning. PLoS One 2011;6:e25883.
    • (2011) PLoS One , vol.6 , pp. e25883
    • Lindström, E.S.1    Östman, Ö.2
  • 159
    • 33846253531 scopus 로고    scopus 로고
    • Relationships between temperature responses and bacterial community structure along seasonal and altitudi-nal gradients
    • Lipson DA. Relationships between temperature responses and bacterial community structure along seasonal and altitudi-nal gradients. FEMS Microbiol Ecol 2007;59:418-27.
    • (2007) FEMS Microbiol Ecol , vol.59 , pp. 418-427
    • Lipson, D.A.1
  • 160
    • 53849121647 scopus 로고    scopus 로고
    • Rules of engagement: Interspecies interactions that regulate microbial communities
    • Little AEF, Robinson CJ, Peterson SB et al. Rules of engagement: interspecies interactions that regulate microbial communities. Annu Rev Microbiol 2008;62:375-401.
    • (2008) Annu Rev Microbiol , vol.62 , pp. 375-401
    • Little, A.E.F.1    Robinson, C.J.2    Peterson, S.B.3
  • 161
    • 0028159926 scopus 로고
    • On the temperature dependence of soil respiration
    • Lloyd J, Taylor J. On the temperature dependence of soil respiration. Funct Ecol 1994;8:315-23.
    • (1994) Funct Ecol , vol.8 , pp. 315-323
    • Lloyd, J.1    Taylor, J.2
  • 162
    • 84969749326 scopus 로고    scopus 로고
    • Scaling laws predict global microbial diversity
    • Locey KJ, Lennon JT. Scaling laws predict global microbial diversity. P Natl Acad Sci USA 2016;113:5970-5.
    • (2016) P Natl Acad Sci USA , vol.113 , pp. 5970-5975
    • Locey, K.J.1    Lennon, J.T.2
  • 163
    • 33947627763 scopus 로고    scopus 로고
    • Microbial growth on partially saturated rough surfaces: Simulations in idealized roughness networks
    • Long T, Or D. Microbial growth on partially saturated rough surfaces: Simulations in idealized roughness networks. Water Resour Res 2007;43:W02409.
    • (2007) Water Resour Res , vol.43 , pp. W02409
    • Long, T.1    Or, D.2
  • 164
    • 84925163899 scopus 로고    scopus 로고
    • Ecology and exploration of the rare biosphere
    • Lynch MDJ, Neufeld JD. Ecology and exploration of the rare biosphere. Nat Rev Microbiol 2015;13:217-29.
    • (2015) Nat Rev Microbiol , vol.13 , pp. 217-229
    • Lynch, M.D.J.1    Neufeld, J.D.2
  • 165
    • 0020450813 scopus 로고
    • Transport of Rhizobium and Pseudomonas through soil
    • Madsen EL, Alexander M. Transport of Rhizobium and Pseudomonas through soil. Soil Sci Soc Am J 1982;46:557-60.
    • (1982) Soil Sci Soc Am J , vol.46 , pp. 557-560
    • Madsen, E.L.1    Alexander, M.2
  • 166
    • 84861410094 scopus 로고    scopus 로고
    • Responses of soil microbial communities to water stress: Results from a meta-analysis
    • Manzoni S, Schimel JP, Porporato A. Responses of soil microbial communities to water stress: results from a meta-analysis. Ecology 2012;93:930-8.
    • (2012) Ecology , vol.93 , pp. 930-938
    • Manzoni, S.1    Schimel, J.P.2    Porporato, A.3
  • 167
    • 84911410724 scopus 로고    scopus 로고
    • Invariant soil water potential at zero microbial respiration explained by hydrological discontinuity in dry soils
    • Manzoni S, Katul G. Invariant soil water potential at zero microbial respiration explained by hydrological discontinuity in dry soils. Geophys Res Lett 2014;41:7151-8.
    • (2014) Geophys Res Lett , vol.41 , pp. 7151-7158
    • Manzoni, S.1    Katul, G.2
  • 168
    • 0031956351 scopus 로고    scopus 로고
    • Bacterial diversity in the bulk soil and rhizosphere fractions of Lolium perenne and Trifolium repens as revealed by PCR restriction analysis of 16S rDNA
    • Marilley L, Vogt G, Blanc M et al. Bacterial diversity in the bulk soil and rhizosphere fractions of Lolium perenne and Trifolium repens as revealed by PCR restriction analysis of 16S rDNA. Plant Soil 1998;198:219-24.
    • (1998) Plant Soil , vol.198 , pp. 219-224
    • Marilley, L.1    Vogt, G.2    Blanc, M.3
  • 169
    • 0034851136 scopus 로고    scopus 로고
    • Soil and plant specific effects on bacterial community composition in the rhizosphere
    • Marschner P, Yang CH, Lieberei R et al. Soil and plant specific effects on bacterial community composition in the rhizosphere. Soil Biol Biochem 2001;33:1437-45.
    • (2001) Soil Biol Biochem , vol.33 , pp. 1437-1445
    • Marschner, P.1    Yang, C.H.2    Lieberei, R.3
  • 170
  • 171
    • 84881233841 scopus 로고    scopus 로고
    • The rhizosphere microbiome: Significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms
    • Mendes R, Garbeva P, Raaijmakers JM. The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. FEMS Microbiol Rev 2013;37:634-63.
    • (2013) FEMS Microbiol Rev , vol.37 , pp. 634-663
    • Mendes, R.1    Garbeva, P.2    Raaijmakers, J.M.3
  • 172
    • 84978803891 scopus 로고    scopus 로고
    • Bacterial community structure at the microscale in two different soils
    • Michelland R, Thioulouse J, Kyselková M et al. Bacterial community structure at the microscale in two different soils. Microb Ecol 2016;72:717-24.
    • (2016) Microb Ecol , vol.72 , pp. 717-724
    • Michelland, R.1    Thioulouse, J.2    Kyselková, M.3
  • 173
    • 25844497520 scopus 로고    scopus 로고
    • Keeping in touch: Microbial life on soil particle surfaces
    • Mills AL. Keeping in touch: Microbial life on soil particle surfaces. Adv Agron 2003;78:1-43.
    • (2003) Adv Agron , vol.78 , pp. 1-43
    • Mills, A.L.1
  • 174
    • 84879045964 scopus 로고    scopus 로고
    • Strong inter-population cooperation leads to partner intermixing in microbial communities
    • Momeni B, Brileya KA, Fields MW et al. Strong inter-population cooperation leads to partner intermixing in microbial communities. eLife 2013;2:e00230.
    • (2013) eLife , vol.2 , pp. e00230
    • Momeni, B.1    Brileya, K.A.2    Fields, M.W.3
  • 175
    • 84864633123 scopus 로고    scopus 로고
    • Impact of soil matric potential on the fine-scale spatial distribution and activity of specific microbial degrader communities
    • Monard C, Mchergui C, Nunan N et al. Impact of soil matric potential on the fine-scale spatial distribution and activity of specific microbial degrader communities. FEMS Microbiol Ecol 2012;81:673-83.
    • (2012) FEMS Microbiol Ecol , vol.81 , pp. 673-683
    • Monard, C.1    Mchergui, C.2    Nunan, N.3
  • 176
    • 3042698659 scopus 로고    scopus 로고
    • Detritus, trophic dynamics and biodiversity
    • Moore JC, Berlow EL, Coleman DC et al. Detritus, trophic dynamics and biodiversity. Ecol Lett 2004;7:584-600.
    • (2004) Ecol Lett , vol.7 , pp. 584-600
    • Moore, J.C.1    Berlow, E.L.2    Coleman, D.C.3
  • 177
    • 84994228718 scopus 로고    scopus 로고
    • The genome of the toluene-degrading Pseudomonas veronii strain 1YdBTEX2 and its differential gene expression in contaminated sand
    • Morales M, Sentchilo V, Bertelli C et al. The genome of the toluene-degrading Pseudomonas veronii strain 1YdBTEX2 and its differential gene expression in contaminated sand. PLoS One 2016;11:e0165850.
    • (2016) PLoS One , vol.11 , pp. e0165850
    • Morales, M.1    Sentchilo, V.2    Bertelli, C.3
  • 178
    • 84873321099 scopus 로고    scopus 로고
    • Responses of soil heterotrophic respiration to moisture availability: An exploration of processes and models
    • Moyano FE, Manzoni S, Chenu C. Responses of soil heterotrophic respiration to moisture availability: an exploration of processes and models. Soil Biol Biochem 2013;59:72-85.
    • (2013) Soil Biol Biochem , vol.59 , pp. 72-85
    • Moyano, F.E.1    Manzoni, S.2    Chenu, C.3
  • 179
    • 84859149160 scopus 로고    scopus 로고
    • The moisture response of soil heterotrophic respiration: Interaction with soil properties
    • Moyano FE, Vasilyeva NA, Bouckaert L et al. The moisture response of soil heterotrophic respiration: interaction with soil properties. Biogeosciences 2012;9:1173-82.
    • (2012) Biogeosciences , vol.9 , pp. 1173-1182
    • Moyano, F.E.1    Vasilyeva, N.A.2    Bouckaert, L.3
  • 180
    • 33744915723 scopus 로고    scopus 로고
    • Spatial stratification of soil bacterial populations in aggregates of diverse soils
    • Mummey D, Holben W, Six J et al. Spatial stratification of soil bacterial populations in aggregates of diverse soils. Microb Ecol 2006;51:404-11.
    • (2006) Microb Ecol , vol.51 , pp. 404-411
    • Mummey, D.1    Holben, W.2    Six, J.3
  • 181
    • 84979583990 scopus 로고    scopus 로고
    • Spatial structure, cooperation and competition in biofilms
    • Nadell CD, Drescher K, Foster KR. Spatial structure, cooperation and competition in biofilms. Nat Rev Microbiol 2016;14:589-600.
    • (2016) Nat Rev Microbiol , vol.14 , pp. 589-600
    • Nadell, C.D.1    Drescher, K.2    Foster, K.R.3
  • 183
    • 84884155935 scopus 로고    scopus 로고
    • Response of microbial communities to long-term fertilization depends on their microhabitat
    • Neumann D, Heuer A, Hemkemeyer M et al. Response of microbial communities to long-term fertilization depends on their microhabitat. FEMS Microbiol Ecol 2013;86:71-84.
    • (2013) FEMS Microbiol Ecol , vol.86 , pp. 71-84
    • Neumann, D.1    Heuer, A.2    Hemkemeyer, M.3
  • 184
  • 185
    • 38949132830 scopus 로고    scopus 로고
    • Horizontal gene transfer and microevolution in soil
    • van Elsas JD, Trevors JT, Jansson JK eds 2nd edn. Boca Raton, FL: CRC Press
    • Nielsen KM, Johnsen P, van Elsas JD. Horizontal gene transfer and microevolution in soil. In: van Elsas JD, Trevors JT, Jansson JK (eds.) Modern Soil Microbiology, 2nd edn. Boca Raton, FL: CRC Press, 2007, 55-81.
    • (2007) Modern Soil Microbiology , pp. 55-81
    • Nielsen, K.M.1    Johnsen, P.2    Van Elsas, J.D.3
  • 186
    • 84973131059 scopus 로고    scopus 로고
    • The subzero microbiome: Microbial activity in frozen and thawing soils
    • Nikrad MP, Kerkhof LJ, Häggblom MM. The subzero microbiome: microbial activity in frozen and thawing soils. FEMS Microbiol Ecol 2016;92, DOI: 10.1093/femsec/fiw081.
    • (2016) FEMS Microbiol Ecol , vol.92
    • Nikrad, M.P.1    Kerkhof, L.J.2    Häggblom, M.M.3
  • 187
    • 0034869048 scopus 로고    scopus 로고
    • Quantification of the in situ distribution of soil bacteria by large-scale imaging of thin sections of undisturbed soil
    • Nunan N, Ritz K, Crabb D et al. Quantification of the in situ distribution of soil bacteria by large-scale imaging of thin sections of undisturbed soil. FEMS Microbiol Ecol 2001;37:67-77.
    • (2001) FEMS Microbiol Ecol , vol.37 , pp. 67-77
    • Nunan, N.1    Ritz, K.2    Crabb, D.3
  • 188
    • 0036834886 scopus 로고    scopus 로고
    • In situ spatial patterns of soil bacterial populations, mapped at multiple scales, in an arable soil
    • Nunan N, Wu K, Young IM et al. In situ spatial patterns of soil bacterial populations, mapped at multiple scales, in an arable soil. Microb Ecol 2002;44:296-305.
    • (2002) Microb Ecol , vol.44 , pp. 296-305
    • Nunan, N.1    Wu, K.2    Young, I.M.3
  • 189
    • 0037447853 scopus 로고    scopus 로고
    • Spatial distribution of bacterial communities and their relationships with the micro-architecture of soil
    • Nunan N, Wu K, Young IM et al. Spatial distribution of bacterial communities and their relationships with the micro-architecture of soil. FEMS Microbiol Ecol 2003;44:203-15.
    • (2003) FEMS Microbiol Ecol , vol.44 , pp. 203-215
    • Nunan, N.1    Wu, K.2    Young, I.M.3
  • 190
    • 34548011938 scopus 로고    scopus 로고
    • Visualization, modelling and prediction in soil microbiology
    • O'Donnell AG, Young IM, Rushton SP et al. Visualization, modelling and prediction in soil microbiology. Nat Rev Microbiol 2007;5:689-99.
    • (2007) Nat Rev Microbiol , vol.5 , pp. 689-699
    • O'Donnell, A.G.1    Young, I.M.2    Rushton, S.P.3
  • 191
    • 34447514293 scopus 로고    scopus 로고
    • The nineteenth century roots of'everything is everywhere
    • O'Malley MA. The nineteenth century roots of'everything is everywhere'. Nat Rev Microbiol 2007;5:647-51.
    • (2007) Nat Rev Microbiol , vol.5 , pp. 647-651
    • O'Malley, M.A.1
  • 192
    • 0027519106 scopus 로고
    • The role of biology in the formation, stabilization and degradation of soil structure
    • Oades J. The role of biology in the formation, stabilization and degradation of soil structure. Geoderma 1993;56:377-400.
    • (1993) Geoderma , vol.56 , pp. 377-400
    • Oades, J.1
  • 193
    • 34547891867 scopus 로고    scopus 로고
    • Extracellular polymeric substances affecting pore-scale hydrologic conditions for bacterial activity in unsaturated soils
    • Or D, Phutane S, Dechesne A. Extracellular polymeric substances affecting pore-scale hydrologic conditions for bacterial activity in unsaturated soils. Vadose Zone J 2007;6:298-305.
    • (2007) Vadose Zone J , vol.6 , pp. 298-305
    • Or, D.1    Phutane, S.2    Dechesne, A.3
  • 194
    • 34247169452 scopus 로고    scopus 로고
    • Physical constraints affecting bacterial habitats and activity in unsaturated porous media - A review
    • Or D, Smets BF, Wraith JM et al. Physical constraints affecting bacterial habitats and activity in unsaturated porous media - a review. Adv Water Resour 2007;30:1505-27.
    • (2007) Adv Water Resour , vol.30 , pp. 1505-1527
    • Or, D.1    Smets, B.F.2    Wraith, J.M.3
  • 195
    • 0033452463 scopus 로고    scopus 로고
    • Liquid retention and interfacial area in variably saturated porous media: Upscaling from single-pore to sample-scale model
    • Or D, Tuller M. Liquid retention and interfacial area in variably saturated porous media: upscaling from single-pore to sample-scale model. Water Resour Res 1999;35:3591-605.
    • (1999) Water Resour Res , vol.35 , pp. 3591-3605
    • Or, D.1    Tuller, M.2
  • 196
    • 0034028258 scopus 로고    scopus 로고
    • Flow in unsaturated fractured porous media: Hydraulic conductivity of rough surfaces
    • Or D, Tuller M. Flow in unsaturated fractured porous media: Hydraulic conductivity of rough surfaces. Water Resour Res 2000;36:1165-77.
    • (2000) Water Resour Res , vol.36 , pp. 1165-1177
    • Or, D.1    Tuller, M.2
  • 198
    • 2442700718 scopus 로고    scopus 로고
    • Modification of spatial distribution of 2,4-dichlorophenoxyacetic acid degrader microhabitats during growth in soil columns
    • Pallud C, Dechesne A, Gaudet JP et al. Modification of spatial distribution of 2,4-dichlorophenoxyacetic acid degrader microhabitats during growth in soil columns. Appl Environ Microb 2004;70:2709-16.
    • (2004) Appl Environ Microb , vol.70 , pp. 2709-2716
    • Pallud, C.1    Dechesne, A.2    Gaudet, J.P.3
  • 199
    • 0033005340 scopus 로고    scopus 로고
    • Understanding and prediction of soil microbial community dynamics under global change
    • Panikov NS. Understanding and prediction of soil microbial community dynamics under global change. Appl Soil Ecol 1999;11:161-76.
    • (1999) Appl Soil Ecol , vol.11 , pp. 161-176
    • Panikov, N.S.1
  • 201
    • 84982121502 scopus 로고    scopus 로고
    • Quorum sensing signal-response systems in gram-negative bacteria
    • Papenfort K, Bassler BL. Quorum sensing signal-response systems in gram-negative bacteria. Nat Rev Microbiol 2016;14:576-88.
    • (2016) Nat Rev Microbiol , vol.14 , pp. 576-588
    • Papenfort, K.1    Bassler, B.L.2
  • 202
    • 84880792259 scopus 로고    scopus 로고
    • Spatial and temporal biogeography of soil microbial communities in arid and semiarid regions
    • Pasternak Z, Al-Ashhab A, Gatica J et al. Spatial and temporal biogeography of soil microbial communities in arid and semiarid regions. PLoS One 2013;8:e69705.
    • (2013) PLoS One , vol.8 , pp. e69705
    • Pasternak, Z.1    Al-Ashhab, A.2    Gatica, J.3
  • 203
    • 84974733351 scopus 로고    scopus 로고
    • Dimensions of biodiversity in the earth mycobiome
    • Peay KG, Kennedy PG, Talbot JM. Dimensions of biodiversity in the earth mycobiome. Nat Rev Microbiol 2016;14:434-47.
    • (2016) Nat Rev Microbiol , vol.14 , pp. 434-447
    • Peay, K.G.1    Kennedy, P.G.2    Talbot, J.M.3
  • 204
    • 84906944953 scopus 로고    scopus 로고
    • Soil fungal communities of grasslands are environmentally structured at a regional scale in the alps
    • Pellissier L, Niculita-Hirzel H, Dubuis A et al. Soil fungal communities of grasslands are environmentally structured at a regional scale in the alps. Mol Ecol 2014;23:4274-90.
    • (2014) Mol Ecol , vol.23 , pp. 4274-4290
    • Pellissier, L.1    Niculita-Hirzel, H.2    Dubuis, A.3
  • 205
    • 77953619002 scopus 로고    scopus 로고
    • The ecological coherence of high bacterial taxonomic ranks
    • Philippot L, Andersson SGE, Battin TJ et al. The ecological coherence of high bacterial taxonomic ranks. Nat Rev Microbiol 2010;8:523-9.
    • (2010) Nat Rev Microbiol , vol.8 , pp. 523-529
    • Philippot, L.1    Andersson, S.G.E.2    Battin, T.J.3
  • 206
    • 84887987909 scopus 로고    scopus 로고
    • Going back to the roots: The microbial ecology of the rhizosphere
    • Philippot L, Raaijmakers JM, Lemanceau P et al. Going back to the roots: the microbial ecology of the rhizosphere. Nat Rev Microbiol 2013;11:789-99.
    • (2013) Nat Rev Microbiol , vol.11 , pp. 789-799
    • Philippot, L.1    Raaijmakers, J.M.2    Lemanceau, P.3
  • 207
    • 84930626805 scopus 로고    scopus 로고
    • The millimetre-scale distribution of 2,4-D and its degraders drives the fate of 2,4-D at the soil core scale
    • Pinheiro M, Garnier P, Beguet J et al. The millimetre-scale distribution of 2,4-D and its degraders drives the fate of 2,4-D at the soil core scale. Soil Biol Biochem 2015;88:90-100.
    • (2015) Soil Biol Biochem , vol.88 , pp. 90-100
    • Pinheiro, M.1    Garnier, P.2    Beguet, J.3
  • 208
    • 84886653166 scopus 로고    scopus 로고
    • Gains of bacterial flagellar motility in a fungal world
    • Pion M, Bshary R, Bindschedler S et al. Gains of bacterial flagellar motility in a fungal world. Appl Environ Microb 2013;79: 6862-7.
    • (2013) Appl Environ Microb , vol.79 , pp. 6862-6867
    • Pion, M.1    Bshary, R.2    Bindschedler, S.3
  • 209
    • 84863587373 scopus 로고    scopus 로고
    • Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups
    • Placella SA, Brodie EL, Firestone MK. Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups. P Natl Acad Sci USA 2012;109:10931-6.
    • (2012) P Natl Acad Sci USA , vol.109 , pp. 10931-10936
    • Placella, S.A.1    Brodie, E.L.2    Firestone, M.K.3
  • 210
    • 0027948550 scopus 로고
    • Desiccation tolerance of prokaryotes
    • Potts M. Desiccation tolerance of prokaryotes. Microbiol Rev 1994;58:755-805.
    • (1994) Microbiol Rev , vol.58 , pp. 755-805
    • Potts, M.1
  • 211
    • 84996619268 scopus 로고    scopus 로고
    • Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments
    • Pronk GJ, Heister K, Vogel C et al. Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments. Biol Fert Soils 2017;53:9-22.
    • (2017) Biol Fert Soils , vol.53 , pp. 9-22
    • Pronk, G.J.1    Heister, K.2    Vogel, C.3
  • 212
    • 84864581417 scopus 로고    scopus 로고
    • Ecosystem processes and interactions in a morass of diversity
    • Prosser JI. Ecosystem processes and interactions in a morass of diversity. FEMS Microbiol Ecol 2012;81:507-19.
    • (2012) FEMS Microbiol Ecol , vol.81 , pp. 507-519
    • Prosser, J.I.1
  • 214
    • 84931576224 scopus 로고    scopus 로고
    • Dispersing misconceptions and identifying opportunities for the use of'omics' in soil microbial ecology
    • Prosser JI. Dispersing misconceptions and identifying opportunities for the use of'omics' in soil microbial ecology. Nat Rev Microbiol 2015;13:439-46.
    • (2015) Nat Rev Microbiol , vol.13 , pp. 439-446
    • Prosser, J.I.1
  • 215
    • 53849104257 scopus 로고    scopus 로고
    • The rational exploration of microbial diversity
    • Quince C, Curtis TP, Sloan WT. The rational exploration of microbial diversity. ISME J 2008;2:997-1006.
    • (2008) ISME J , vol.2 , pp. 997-1006
    • Quince, C.1    Curtis, T.P.2    Sloan, W.T.3
  • 216
    • 33847327474 scopus 로고    scopus 로고
    • Biogeography: An emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution
    • Ramette A, Tiedje JM. Biogeography: an emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution. Microb Ecol 2007;53:197-207.
    • (2007) Microb Ecol , vol.53 , pp. 197-207
    • Ramette, A.1    Tiedje, J.M.2
  • 217
    • 78650358038 scopus 로고    scopus 로고
    • Consistent effects of nitrogen fertilization on soil bacterial communities in contrasting systems
    • Ramirez KS, Lauber CL, Knight R et al. Consistent effects of nitrogen fertilization on soil bacterial communities in contrasting systems. Ecology 2010;91:3463-70.
    • (2010) Ecology , vol.91 , pp. 3463-3470
    • Ramirez, K.S.1    Lauber, C.L.2    Knight, R.3
  • 218
    • 0034803155 scopus 로고    scopus 로고
    • Quantitative and qualitative microscale distribution of bacteria in soil
    • Ranjard L, Richaume A. Quantitative and qualitative microscale distribution of bacteria in soil. Res Microbiol 2001;152:707-16.
    • (2001) Res Microbiol , vol.152 , pp. 707-716
    • Ranjard, L.1    Richaume, A.2
  • 219
    • 0032959040 scopus 로고    scopus 로고
    • The distribution of anoxic volume in a fractal model of soil
    • Rappoldt C, Crawford JW. The distribution of anoxic volume in a fractal model of soil. Geoderma 1999;88:329-47.
    • (1999) Geoderma , vol.88 , pp. 329-347
    • Rappoldt, C.1    Crawford, J.W.2
  • 220
    • 84900339353 scopus 로고    scopus 로고
    • Spatial ecology of bacteria at the microscale in soil
    • Raynaud X, Nunan N. Spatial ecology of bacteria at the microscale in soil. PLoS One 2014;9:e87217.
    • (2014) PLoS One , vol.9 , pp. e87217
    • Raynaud, X.1    Nunan, N.2
  • 221
    • 84893105600 scopus 로고    scopus 로고
    • Seasonal controls on grassland microbial biogeography: Are they governed by plants, abiotic properties or both?
    • Regan KM, Nunan N, Boeddinghaus RS et al. Seasonal controls on grassland microbial biogeography: Are they governed by plants, abiotic properties or both? Soil Biol Biochem 2014;71:21-30.
    • (2014) Soil Biol Biochem , vol.71 , pp. 21-30
    • Regan, K.M.1    Nunan, N.2    Boeddinghaus, R.S.3
  • 222
    • 34548305141 scopus 로고    scopus 로고
    • Mobility promotes and jeopardizes biodiversity in rock-paper-scissors games
    • Reichenbach T, Mobilia M, Frey E. Mobility promotes and jeopardizes biodiversity in rock-paper-scissors games. Nature 2007;448:1046-9.
    • (2007) Nature , vol.448 , pp. 1046-1049
    • Reichenbach, T.1    Mobilia, M.2    Frey, E.3
  • 223
    • 0028165542 scopus 로고
    • Modeling oxygen diffusion in aggregated soils: II. Anaerobiosis in topsoil layers
    • Renault P, Sierra J. Modeling oxygen diffusion in aggregated soils: II. Anaerobiosis in topsoil layers. Soil Sci Soc Am J 1994;58:1023-30.
    • (1994) Soil Sci Soc Am J , vol.58 , pp. 1023-1030
    • Renault, P.1    Sierra, J.2
  • 224
    • 84864377231 scopus 로고    scopus 로고
    • Modeling microbial dynamics in heterogeneous environments: Growth on soil carbon sources
    • Resat H, Bailey V, McCue LA et al. Modeling microbial dynamics in heterogeneous environments: growth on soil carbon sources. Microb Ecol 2012;63:883-97.
    • (2012) Microb Ecol , vol.63 , pp. 883-897
    • Resat, H.1    Bailey, V.2    McCue, L.A.3
  • 225
    • 84983283879 scopus 로고    scopus 로고
    • Next-generation studies of microbial biofilm communities
    • Rice SA, Wuertz S, Kjelleberg S. Next-generation studies of microbial biofilm communities. Microb Biotechnol 2016;9:677-80.
    • (2016) Microb Biotechnol , vol.9 , pp. 677-680
    • Rice, S.A.1    Wuertz, S.2    Kjelleberg, S.3
  • 226
    • 0000947436 scopus 로고
    • Differences between direct and indirect enumeration of soil bacteria: The influence of soil structure and cell location
    • Richaume A, Steinberg C, Jocteur-Monrozier L et al. Differences between direct and indirect enumeration of soil bacteria: the influence of soil structure and cell location. Soil Biol Biochem 1993;25:641-3.
    • (1993) Soil Biol Biochem , vol.25 , pp. 641-643
    • Richaume, A.1    Steinberg, C.2    Jocteur-Monrozier, L.3
  • 227
    • 0038579327 scopus 로고    scopus 로고
    • Effects of irrigation-induced salinity and sodicity on soil microbial activity
    • Rietz DN, Haynes RJ. Effects of irrigation-induced salinity and sodicity on soil microbial activity. Soil Biol Biochem 2003;35:845-54.
    • (2003) Soil Biol Biochem , vol.35 , pp. 845-854
    • Rietz, D.N.1    Haynes, R.J.2
  • 228
    • 3843143719 scopus 로고    scopus 로고
    • Interactions between soil structure and fungi
    • Ritz K, Young IM. Interactions between soil structure and fungi. Mycologist 2004;18:52-9.
    • (2004) Mycologist , vol.18 , pp. 52-59
    • Ritz, K.1    Young, I.M.2
  • 229
    • 0033868840 scopus 로고    scopus 로고
    • Metabolic activity of permafrost bacteria below the freezing point
    • Rivkina E, Friedmann E, McKay C et al. Metabolic activity of permafrost bacteria below the freezing point. Appl Environ Microb 2000;66:3230-3.
    • (2000) Appl Environ Microb , vol.66 , pp. 3230-3233
    • Rivkina, E.1    Friedmann, E.2    McKay, C.3
  • 230
    • 0026615649 scopus 로고
    • Relationship between desiccation and exopolysaccharide production in a soil Pseudomonas sp
    • Roberson EB, Firestone MK. Relationship between desiccation and exopolysaccharide production in a soil Pseudomonas sp. Appl Environ Microb 1992;58:1284-91.
    • (1992) Appl Environ Microb , vol.58 , pp. 1284-1291
    • Roberson, E.B.1    Firestone, M.K.2
  • 231
    • 34547800097 scopus 로고    scopus 로고
    • Pyrosequencing enumerates and contrasts soil microbial diversity
    • Roesch LFW, Fulthorpe RR, Riva A et al. Pyrosequencing enumerates and contrasts soil microbial diversity. ISME J 2007;1:283-90.
    • (2007) ISME J , vol.1 , pp. 283-290
    • Roesch, L.F.W.1    Fulthorpe, R.R.2    Riva, A.3
  • 232
    • 77956996314 scopus 로고    scopus 로고
    • Soil bacterial and fungal communities across a pH gradient in an arable soil
    • Rousk J, Baath E, Brookes PC et al. Soil bacterial and fungal communities across a pH gradient in an arable soil. ISME J 2010;4:1340-51.
    • (2010) ISME J , vol.4 , pp. 1340-1351
    • Rousk, J.1    Baath, E.2    Brookes, P.C.3
  • 233
    • 62049085271 scopus 로고    scopus 로고
    • Contrasting soil pH effects on fungal and bacterial growth suggest functional redundancy in carbon mineralization
    • Rousk J, Brookes PC, Bååth E. Contrasting soil pH effects on fungal and bacterial growth suggest functional redundancy in carbon mineralization. Appl Environ Microb 2009;75: 1589-96.
    • (2009) Appl Environ Microb , vol.75 , pp. 1589-1596
    • Rousk, J.1    Brookes, P.C.2    Bååth, E.3
  • 234
    • 78650676679 scopus 로고    scopus 로고
    • Microbial biogeography at the soil pore scale
    • Ruamps LS, Nunan N, Chenu C. Microbial biogeography at the soil pore scale. Soil Biol Biochem 2011;43:280-6.
    • (2011) Soil Biol Biochem , vol.43 , pp. 280-286
    • Ruamps, L.S.1    Nunan, N.2    Chenu, C.3
  • 235
    • 84884126620 scopus 로고    scopus 로고
    • Regulation of soil organic C mineralisation at the pore scale
    • Ruamps LS, Nunan N, Pouteau V et al. Regulation of soil organic C mineralisation at the pore scale. FEMS Microbiol Ecol 2013;86:26-35.
    • (2013) FEMS Microbiol Ecol , vol.86 , pp. 26-35
    • Ruamps, L.S.1    Nunan, N.2    Pouteau, V.3
  • 236
    • 84964286062 scopus 로고    scopus 로고
    • Protist-facilitated particle transport using emulated soil micromodels
    • Rubinstein RL, Kadilak AL, Cousens VC et al. Protist-facilitated particle transport using emulated soil micromodels. Environ Sci Technol 2015;49:1384-91.
    • (2015) Environ Sci Technol , vol.49 , pp. 1384-1391
    • Rubinstein, R.L.1    Kadilak, A.L.2    Cousens, V.C.3
  • 238
    • 0041689684 scopus 로고    scopus 로고
    • Seasonal dynamics of previously unknown fungal lineages in tundra soils
    • Schadt CW, Martin AP, Lipson DA et al. Seasonal dynamics of previously unknown fungal lineages in tundra soils. Science 2003;301:1359-61.
    • (2003) Science , vol.301 , pp. 1359-1361
    • Schadt, C.W.1    Martin, A.P.2    Lipson, D.A.3
  • 239
    • 0032892186 scopus 로고    scopus 로고
    • Moisture effects on microbial activity and community structure in decomposing birch litter in the Alaskan taiga
    • Schimel JP, Gulledge JM, Clein-Curley JS et al. Moisture effects on microbial activity and community structure in decomposing birch litter in the Alaskan taiga. Soil Biol Biochem 1999;31:831-8.
    • (1999) Soil Biol Biochem , vol.31 , pp. 831-838
    • Schimel, J.P.1    Gulledge, J.M.2    Clein-Curley, J.S.3
  • 240
    • 84870775558 scopus 로고    scopus 로고
    • Microbial control over carbon cycling in soil
    • Schimel J, Schaeffer SM. Microbial control over carbon cycling in soil. Front Microbiol 2012;3:348.
    • (2012) Front Microbiol , vol.3 , pp. 348
    • Schimel, J.1    Schaeffer, S.M.2
  • 242
    • 84895075576 scopus 로고    scopus 로고
    • Detection and quantification of native microbial populations on soil-grown rice roots by catalyzed reporter deposition-fluorescence in situ hybridization
    • Schmidt H, Eickhorst T. Detection and quantification of native microbial populations on soil-grown rice roots by catalyzed reporter deposition-fluorescence in situ hybridization. FEMS Microbiol Ecol 2014;87:390-402.
    • (2014) FEMS Microbiol Ecol , vol.87 , pp. 390-402
    • Schmidt, H.1    Eickhorst, T.2
  • 243
    • 80053916851 scopus 로고    scopus 로고
    • Persistence of soil organic matter as an ecosystem property
    • Schmidt MWI, Torn MS, Abiven S et al. Persistence of soil organic matter as an ecosystem property. Nature 2011;478:49-56.
    • (2011) Nature , vol.478 , pp. 49-56
    • Schmidt, M.W.I.1    Torn, M.S.2    Abiven, S.3
  • 244
    • 84945480936 scopus 로고    scopus 로고
    • Volatile affairs in microbial interactions
    • Schmidt R, Cordovez V, de Boer W et al. Volatile affairs in microbial interactions. ISME J 2015;9:2329-35.
    • (2015) ISME J , vol.9 , pp. 2329-2335
    • Schmidt, R.1    Cordovez, V.2    De Boer, W.3
  • 245
    • 0035658341 scopus 로고    scopus 로고
    • Seasonal, soil type, and alternative management influences on microbial communities of vegetable cropping systems
    • Schutter M, Sandeno J, Dick R. Seasonal, soil type, and alternative management influences on microbial communities of vegetable cropping systems. Biol Fert Soils 2001;34:397-410.
    • (2001) Biol Fert Soils , vol.34 , pp. 397-410
    • Schutter, M.1    Sandeno, J.2    Dick, R.3
  • 247
    • 0035462376 scopus 로고    scopus 로고
    • Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment
    • Sessitsch A, Weilharter A, Gerzabek MH et al. Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment. Appl Environ Microb 2001;67:4215-24.
    • (2001) Appl Environ Microb , vol.67 , pp. 4215-4224
    • Sessitsch, A.1    Weilharter, A.2    Gerzabek, M.H.3
  • 248
    • 0024226453 scopus 로고
    • Denitrification response to soil wetting in aggregated and unaggregated soil
    • Sexstone A, Parkin T, Tiedje J. Denitrification response to soil wetting in aggregated and unaggregated soil. Soil Biol Biochem 1988;20:767-9.
    • (1988) Soil Biol Biochem , vol.20 , pp. 767-769
    • Sexstone, A.1    Parkin, T.2    Tiedje, J.3
  • 249
    • 84988416263 scopus 로고    scopus 로고
    • Diversity is the question, not the answer
    • Shade A. Diversity is the question, not the answer. ISME J 2016;11:1-6.
    • (2016) ISME J , vol.11 , pp. 1-6
    • Shade, A.1
  • 250
    • 0030301851 scopus 로고    scopus 로고
    • Respiratory activity and oxygen distribution in natural aggregates in relation to anaerobiosis
    • Sierra J, Renault P. Respiratory activity and oxygen distribution in natural aggregates in relation to anaerobiosis. Soil Sci Soc Am J 1996;60:1428-38.
    • (1996) Soil Sci Soc Am J , vol.60 , pp. 1428-1438
    • Sierra, J.1    Renault, P.2
  • 251
    • 84949755382 scopus 로고    scopus 로고
    • Exploiting the fungal highway: Development of a novel tool for the in situ isolation of bacteria migrating along fungal mycelium
    • Simon A, Bindschedler S, Job D et al. Exploiting the fungal highway: development of a novel tool for the in situ isolation of bacteria migrating along fungal mycelium. FEMS Microbiol Ecol 2015;91:fiv116.
    • (2015) FEMS Microbiol Ecol , vol.91 , pp. fiv116
    • Simon, A.1    Bindschedler, S.2    Job, D.3
  • 252
    • 4143075749 scopus 로고    scopus 로고
    • A history of research on the link between (micro) aggregates, soil biota, and soil organic matter dynamics
    • Six J, Bossuyt H, Degryze S et al. A history of research on the link between (micro) aggregates, soil biota, and soil organic matter dynamics. Soil Till Res 2004;79:7-31.
    • (2004) Soil Till Res , vol.79 , pp. 7-31
    • Six, J.1    Bossuyt, H.2    Degryze, S.3
  • 253
    • 0034509260 scopus 로고    scopus 로고
    • Soil macroaggregate turnover and microaggregate formation: A mechanism for C sequestration under no-tillage agriculture
    • Six J, Elliott ET, Paustian K. Soil macroaggregate turnover and microaggregate formation: a mechanism for C sequestration under no-tillage agriculture. Soil Biol Biochem 2000;32:2099-103.
    • (2000) Soil Biol Biochem , vol.32 , pp. 2099-2103
    • Six, J.1    Elliott, E.T.2    Paustian, K.3
  • 254
    • 84890239039 scopus 로고    scopus 로고
    • Aggregate-associated soil organic matter as an ecosystem property and a measurement tool
    • Six J, Paustian K. Aggregate-associated soil organic matter as an ecosystem property and a measurement tool. Soil Biol Biochem 2014;68:A4-9.
    • (2014) Soil Biol Biochem , vol.68 , pp. A4-A9
    • Six, J.1    Paustian, K.2
  • 255
    • 85019861482 scopus 로고    scopus 로고
    • Water balance creates a threshold in soil pH at the global scale
    • Slessarev EW, Lin Y, Bingham NL et al. Water balance creates a threshold in soil pH at the global scale. Nature 2016;540: 567-9.
    • (2016) Nature , vol.540 , pp. 567-569
    • Slessarev, E.W.1    Lin, Y.2    Bingham, N.L.3
  • 256
    • 33644843833 scopus 로고    scopus 로고
    • Quantifying the roles of immigration and chance in shaping prokaryote community structure
    • Sloan WT, Lunn M, Woodcock S et al. Quantifying the roles of immigration and chance in shaping prokaryote community structure. Environ Microbiol 2006;8:732-40.
    • (2006) Environ Microbiol , vol.8 , pp. 732-740
    • Sloan, W.T.1    Lunn, M.2    Woodcock, S.3
  • 257
    • 0035487320 scopus 로고    scopus 로고
    • Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: Plant-dependent enrichment and seasonal shifts revealed
    • Smalla K, Wieland G, Buchner A et al. Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Appl Environ Microb 2001;67:4742-51.
    • (2001) Appl Environ Microb , vol.67 , pp. 4742-4751
    • Smalla, K.1    Wieland, G.2    Buchner, A.3
  • 258
    • 49149119258 scopus 로고    scopus 로고
    • Phages across the biosphere: Contrasts of viruses in soil and aquatic environments
    • Srinivasiah S, Bhavsar J, Thapar K et al. Phages across the biosphere: contrasts of viruses in soil and aquatic environments. Res Microbiol 2008;159:349-57.
    • (2008) Res Microbiol , vol.159 , pp. 349-357
    • Srinivasiah, S.1    Bhavsar, J.2    Thapar, K.3
  • 259
    • 85057419013 scopus 로고    scopus 로고
    • The soil environment
    • Van Elsas JD, Trevors JT, Jansson JK eds Boca Raton, FL: CRC Press
    • Standing D, Killham K. The soil environment. In: Van Elsas JD, Trevors JT, Jansson JK (eds.) Modern Soil Microbiology. Boca Raton, FL: CRC Press, 2007, 1-22.
    • (2007) Modern Soil Microbiology , pp. 1-22
    • Standing, D.1    Killham, K.2
  • 260
    • 63049134274 scopus 로고    scopus 로고
    • Social interactions and distribution of Bacillus subtilis pherotypes at microscale
    • Stefanic P, Mandic-Mulec I. Social interactions and distribution of Bacillus subtilis pherotypes at microscale. J Bacteriol 2009;191:1756-64.
    • (2009) J Bacteriol , vol.191 , pp. 1756-1764
    • Stefanic, P.1    Mandic-Mulec, I.2
  • 261
    • 84865345637 scopus 로고    scopus 로고
    • Stochastic and deterministic assembly processes in subsurface microbial communities
    • Stegen JC, Lin X, Konopka AE et al. Stochastic and deterministic assembly processes in subsurface microbial communities. ISME J 2012;6:1653-64.
    • (2012) ISME J , vol.6 , pp. 1653-1664
    • Stegen, J.C.1    Lin, X.2    Konopka, A.E.3
  • 262
    • 0037227166 scopus 로고    scopus 로고
    • Differential decomposition of arbuscu-lar mycorrhizal fungal hyphae and glomalin
    • Steinberg PD, Rillig MC. Differential decomposition of arbuscu-lar mycorrhizal fungal hyphae and glomalin. Soil Biol Biochem 2003;35:191-4.
    • (2003) Soil Biol Biochem , vol.35 , pp. 191-194
    • Steinberg, P.D.1    Rillig, M.C.2
  • 263
    • 0002169635 scopus 로고    scopus 로고
    • Soil as an environment for microbial life
    • Van Elsas J, Trevors J, Wellington E eds New York City, NY: Marcel Dekker
    • Stotzky G. Soil as an environment for microbial life. In: Van Elsas J, Trevors J, Wellington E (eds.) Modern Soil Microbiology. New York City, NY: Marcel Dekker, 1997, 1-20.
    • (1997) Modern Soil Microbiology , pp. 1-20
    • Stotzky, G.1
  • 264
    • 85017157846 scopus 로고    scopus 로고
    • Microbial community response to hydration-desiccation cycles in desert soil
    • Štovíček A, Kim M, Or D et al. Microbial community response to hydration-desiccation cycles in desert soil. Sci Rep 2017, DOI: 10.1038/srep45735.
    • (2017) Sci Rep
    • Štovíček, A.1    Kim, M.2    Or, D.3
  • 265
    • 32044432555 scopus 로고    scopus 로고
    • Crucial role of extracellular polysaccharides in desiccation and freezing tolerance in the terrestrial cyanobacterium nostoc commune
    • Tamaru Y, Takani Y, Yoshida T et al. Crucial role of extracellular polysaccharides in desiccation and freezing tolerance in the terrestrial cyanobacterium nostoc commune. Appl Environ Microb 2005;71:7327-33.
    • (2005) Appl Environ Microb , vol.71 , pp. 7327-7333
    • Tamaru, Y.1    Takani, Y.2    Yoshida, T.3
  • 266
    • 84954106722 scopus 로고    scopus 로고
    • Bacterial flagellar motility on hydrated rough surfaces controlled by aqueous film thickness and connectedness
    • Tecon R, Or D. Bacterial flagellar motility on hydrated rough surfaces controlled by aqueous film thickness and connectedness. Sci Rep 2016;6:19409.
    • (2016) Sci Rep , vol.6 , pp. 19409
    • Tecon, R.1    Or, D.2
  • 267
    • 85014790300 scopus 로고    scopus 로고
    • Cooperation in carbon source degradation shapes spatial self-organization of microbial consortia on hydrated surfaces
    • Tecon R, Or D. Cooperation in carbon source degradation shapes spatial self-organization of microbial consortia on hydrated surfaces. Sci Rep 2017;7:43726.
    • (2017) Sci Rep , vol.7 , pp. 43726
    • Tecon, R.1    Or, D.2
  • 268
    • 84914142313 scopus 로고    scopus 로고
    • Global diversity and geography of soil fungi
    • Tedersoo L, Bahram M, Põlme S et al. Global diversity and geography of soil fungi. Science 2014;346:1-11.
    • (2014) Science , vol.346 , pp. 1-11
    • Tedersoo, L.1    Bahram, M.2    Põlme, S.3
  • 269
    • 85047677674 scopus 로고    scopus 로고
    • The role of the earthworm Lumbricus terrestris in the transport of bacterial in-ocula through soil
    • Thorpe IS, Killham K, Prosser JI et al. The role of the earthworm Lumbricus terrestris in the transport of bacterial in-ocula through soil. Biol Fert Soils 1996;23:132-9.
    • (1996) Biol Fert Soils , vol.23 , pp. 132-139
    • Thorpe, I.S.1    Killham, K.2    Prosser, J.I.3
  • 271
    • 0020468896 scopus 로고
    • Organic matter and water-stable aggregates in soils
    • Tisdall JM, Oades JM. Organic matter and water-stable aggregates in soils. J Soil Sci 1982;33:141-63.
    • (1982) J Soil Sci , vol.33 , pp. 141-163
    • Tisdall, J.M.1    Oades, J.M.2
  • 272
    • 6944250573 scopus 로고    scopus 로고
    • Microbial succession in litter decomposition in the semi-arid chaco woodland
    • Torres PA, Abril AB, Bucher EH. Microbial succession in litter decomposition in the semi-arid chaco woodland. Soil Biol Biochem 2005;37:49-54.
    • (2005) Soil Biol Biochem , vol.37 , pp. 49-54
    • Torres, P.A.1    Abril, A.B.2    Bucher, E.H.3
  • 273
    • 0036270789 scopus 로고    scopus 로고
    • Microbial diversity and function in soil: From genes to ecosystems
    • Torsvik V, Øvreås L. Microbial diversity and function in soil: from genes to ecosystems. Curr Opin Microbiol 2002;5:240-5.
    • (2002) Curr Opin Microbiol , vol.5 , pp. 240-245
    • Torsvik, V.1    Øvreås, L.2
  • 274
    • 38049126083 scopus 로고    scopus 로고
    • Microbial phylogeny and diversity in soil
    • Van Elsas JD, Trevors JT, Jansson JK eds Boca Raton, FL: CRC Press
    • Torsvik V, Øvreås L. Microbial phylogeny and diversity in soil. In: Van Elsas JD, Trevors JT, Jansson JK (eds.) Modern Soil Microbiology. Boca Raton, FL: CRC Press, 2007, 24-51.
    • (2007) Modern Soil Microbiology , pp. 24-51
    • Torsvik, V.1    Øvreås, L.2
  • 275
    • 0037052493 scopus 로고    scopus 로고
    • Prokaryotic diversity-magnitude, dynamics, and controlling factors
    • Torsvik V, Øvreås L, Thingstad TF. Prokaryotic diversity-magnitude, dynamics, and controlling factors. Science 2002;296:1064-6.
    • (2002) Science , vol.296 , pp. 1064-1066
    • Torsvik, V.1    Øvreås, L.2    Thingstad, T.F.3
  • 276
    • 0030497690 scopus 로고    scopus 로고
    • Total bacterial diversity in soil and sediment communities-a review
    • Torsvik V, Sørheim R, Goksøyr J. Total bacterial diversity in soil and sediment communities-a review. J Ind Microbiol 1996;17:170-8.
    • (1996) J Ind Microbiol , vol.17 , pp. 170-178
    • Torsvik, V.1    Sørheim, R.2    Goksøyr, J.3
  • 277
    • 76349120422 scopus 로고    scopus 로고
    • Biogeochemical interfaces in soil: The interdisciplinary challenge for soil science
    • Totsche KU, Rennert T, Gerzabek MH et al. Biogeochemical interfaces in soil: The interdisciplinary challenge for soil science. J Plant Nutr Soil Sc 2010;173:88-99.
    • (2010) J Plant Nutr Soil Sc , vol.173 , pp. 88-99
    • Totsche, K.U.1    Rennert, T.2    Gerzabek, M.H.3
  • 278
    • 0037271271 scopus 로고    scopus 로고
    • A two-species test of the hypothesis that spatial isolation influences microbial diversity in soil
    • Treves DS, Xia B, Zhou J et al. A two-species test of the hypothesis that spatial isolation influences microbial diversity in soil. Microb Ecol 2003;45:20-8.
    • (2003) Microb Ecol , vol.45 , pp. 20-28
    • Treves, D.S.1    Xia, B.2    Zhou, J.3
  • 279
    • 27644588332 scopus 로고    scopus 로고
    • Water films and scaling of soil characteristic curves at low water contents
    • Tuller M, Or D. Water films and scaling of soil characteristic curves at low water contents. Water Resour Res 2005;41:w09403.
    • (2005) Water Resour Res , vol.41 , pp. w09403
    • Tuller, M.1    Or, D.2
  • 280
    • 0032991366 scopus 로고    scopus 로고
    • Adsorption and capillary condensation in porous media: Liquid retention and interfacial configurations in angular pores
    • Tuller M, Or D, Dudley LM. Adsorption and capillary condensation in porous media: liquid retention and interfacial configurations in angular pores. Water Resour Res 1999;35:1949-64.
    • (1999) Water Resour Res , vol.35 , pp. 1949-1964
    • Tuller, M.1    Or, D.2    Dudley, L.M.3
  • 281
    • 0035010903 scopus 로고    scopus 로고
    • The role of bacterial motility in the survival and spread of Pseudomonas fluorescens in soil and in the attachment and colonisation of wheat roots
    • Turnbull GA, Morgan JAW, Whipps JM et al. The role of bacterial motility in the survival and spread of Pseudomonas fluorescens in soil and in the attachment and colonisation of wheat roots. FEMS Microbiol Ecol 2001;36:21-31.
    • (2001) FEMS Microbiol Ecol , vol.36 , pp. 21-31
    • Turnbull, G.A.1    Morgan, J.A.W.2    Whipps, J.M.3
  • 282
    • 77954695132 scopus 로고    scopus 로고
    • Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil
    • Uroz S, Buée M, Murat C et al. Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil. Environ Microbiol Rep 2010;2:281-8.
    • (2010) Environ Microbiol Rep , vol.2 , pp. 281-288
    • Uroz, S.1    Buée, M.2    Murat, C.3
  • 283
    • 68749098369 scopus 로고    scopus 로고
    • Mineral weathering by bacteria: Ecology, actors and mechanisms
    • Uroz S, Calvaruso C, Turpault M-P et al. Mineral weathering by bacteria: Ecology, actors and mechanisms. Trends Microbiol 2009;17:378-87.
    • (2009) Trends Microbiol , vol.17 , pp. 378-387
    • Uroz, S.1    Calvaruso, C.2    Turpault, M.-P.3
  • 284
    • 84878981180 scopus 로고    scopus 로고
    • A thready affair: Linking fungal diversity and community dynamics to terrestrial decomposition processes
    • van der Wal A, Geydan TD, Kuyper TW et al. A thready affair: linking fungal diversity and community dynamics to terrestrial decomposition processes. FEMS Microbiol Rev 2013;37:477-94.
    • (2013) FEMS Microbiol Rev , vol.37 , pp. 477-494
    • Van Der Wal, A.1    Geydan, T.D.2    Kuyper, T.W.3
  • 285
    • 34547245484 scopus 로고    scopus 로고
    • Microbial interactions in soil
    • Van Elsas JD, Trevors JT, Jansson JK eds Boca Raton, FL: CRC Press
    • Van Elsas J, Tam L, Finlay R et al. Microbial interactions in soil. In: Van Elsas JD, Trevors JT, Jansson JK (eds.) Modern Soil Microbiology. Boca Raton, FL: CRC Press, 2007a, 1177-210.
    • (2007) Modern Soil Microbiology , pp. 1177-1210
    • Van Elsas, J.1    Tam, L.2    Finlay, R.3
  • 286
    • 85057421370 scopus 로고    scopus 로고
    • The bacteria and archaea in soil
    • Van Elsas JD, Trevors JT, Jansson JK eds Boca Raton, FL: CRC Press
    • Van Elsas J, Torsvik V, Hartmann A et al. The bacteria and archaea in soil. In: Van Elsas JD, Trevors JT, Jansson JK (eds.) Modern Soil Microbiology. Boca Raton, FL: CRC Press, 2007b, 83-105.
    • (2007) Modern Soil Microbiology , pp. 83-105
    • Van Elsas, J.1    Torsvik, V.2    Hartmann, A.3
  • 288
    • 0037341758 scopus 로고    scopus 로고
    • Horizontal gene transfer in the phytosphere
    • Van Elsas JD, Turner S, Bailey MJ. Horizontal gene transfer in the phytosphere. New Phytol 2003;157:525-37.
    • (2003) New Phytol , vol.157 , pp. 525-537
    • Van Elsas, J.D.1    Turner, S.2    Bailey, M.J.3
  • 289
    • 84935755756 scopus 로고    scopus 로고
    • Environmental factors and traits that drive plant litter decomposition do not determine home-field advantage effects
    • Veen GF, Sundqvist MK, Wardle DA. Environmental factors and traits that drive plant litter decomposition do not determine home-field advantage effects. Funct Ecol 2015;29:981-91.
    • (2015) Funct Ecol , vol.29 , pp. 981-991
    • Veen, G.F.1    Sundqvist, M.K.2    Wardle, D.A.3
  • 290
    • 70349556156 scopus 로고    scopus 로고
    • Sociobiology of the myxobacteria
    • Velicer GJ, Vos M. Sociobiology of the myxobacteria. Annu Rev Microbiol 2009;63:599-623.
    • (2009) Annu Rev Microbiol , vol.63 , pp. 599-623
    • Velicer, G.J.1    Vos, M.2
  • 291
    • 63049092891 scopus 로고    scopus 로고
    • Terragenome: A consortium for the sequencing of a soil metagenome
    • Vogel TM, Simonet P, Jansson JK et al. Terragenome: A consortium for the sequencing of a soil metagenome. Nat Rev Microbiol 2009;7:252-.
    • (2009) Nat Rev Microbiol , vol.7 , pp. 252
    • Vogel, T.M.1    Simonet, P.2    Jansson, J.K.3
  • 292
    • 84884973643 scopus 로고    scopus 로고
    • Micro-scale determinants of bacterial diversity in soil
    • Vos M, Wolf AB, Jennings SJ et al. Micro-scale determinants of bacterial diversity in soil. FEMS Microbiol Rev 2013;37:936-54.
    • (2013) FEMS Microbiol Rev , vol.37 , pp. 936-954
    • Vos, M.1    Wolf, A.B.2    Jennings, S.J.3
  • 294
    • 77953646573 scopus 로고    scopus 로고
    • Aqueous films limit bacterial cell motility and colony expansion on partially saturated rough surfaces
    • Wang G, Or D. Aqueous films limit bacterial cell motility and colony expansion on partially saturated rough surfaces. Environ Microbiol 2010;12:1363-73.
    • (2010) Environ Microbiol , vol.12 , pp. 1363-1373
    • Wang, G.1    Or, D.2
  • 295
    • 84870828527 scopus 로고    scopus 로고
    • A hydration-based biophysical index for the onset of soil microbial coexistence
    • Wang G, Or D. A hydration-based biophysical index for the onset of soil microbial coexistence. Sci Rep 2012;2:881.
    • (2012) Sci Rep , vol.2 , pp. 881
    • Wang, G.1    Or, D.2
  • 296
    • 84872927594 scopus 로고    scopus 로고
    • Hydration dynamics promote bacterial coexistence on rough surfaces
    • Wang G, Or D. Hydration dynamics promote bacterial coexistence on rough surfaces. ISME J 2013;7:395-404.
    • (2013) ISME J , vol.7 , pp. 395-404
    • Wang, G.1    Or, D.2
  • 297
    • 84945438695 scopus 로고    scopus 로고
    • Trophic interactions induce spatial self-organization of microbial consortia on rough surfaces
    • Wang G, Or D. Trophic interactions induce spatial self-organization of microbial consortia on rough surfaces. Sci Rep 2014;4:6757.
    • (2014) Sci Rep , vol.4 , pp. 6757
    • Wang, G.1    Or, D.2
  • 298
    • 84879957354 scopus 로고    scopus 로고
    • Transport and fate of microorganisms in soils with preferential flow under different solution chemistry conditions
    • Wang Y, Bradford SA, Simunek J. Transport and fate of microorganisms in soils with preferential flow under different solution chemistry conditions. Water Resour Res 2013;49:2424-36.
    • (2013) Water Resour Res , vol.49 , pp. 2424-2436
    • Wang, Y.1    Bradford, S.A.2    Simunek, J.3
  • 299
    • 63849207489 scopus 로고    scopus 로고
    • Three genomes from the phylum acidobacteria provide insight into the lifestyles of these microorganisms in soils
    • Ward NL, Challacombe JF, Janssen PH et al. Three genomes from the phylum acidobacteria provide insight into the lifestyles of these microorganisms in soils. Appl Environ Microb 2009;75:2046-56.
    • (2009) Appl Environ Microb , vol.75 , pp. 2046-2056
    • Ward, N.L.1    Challacombe, J.F.2    Janssen, P.H.3
  • 300
    • 79958719016 scopus 로고    scopus 로고
    • Terrestrial ecosystem responses to species gains and losses
    • Wardle DA, Bardgett RD, Callaway RM et al. Terrestrial ecosystem responses to species gains and losses. Science 2011;332: 1273-7.
    • (2011) Science , vol.332 , pp. 1273-1277
    • Wardle, D.A.1    Bardgett, R.D.2    Callaway, R.M.3
  • 301
    • 2942651148 scopus 로고    scopus 로고
    • Ecological linkages between aboveground and belowground biota
    • Wardle DA, Bardgett RD, Klironomos JN et al. Ecological linkages between aboveground and belowground biota. Science 2004;304:1629-33.
    • (2004) Science , vol.304 , pp. 1629-1633
    • Wardle, D.A.1    Bardgett, R.D.2    Klironomos, J.N.3
  • 302
    • 0037436142 scopus 로고    scopus 로고
    • Microbial geoengineers
    • Warren LA, Kauffman ME. Microbial geoengineers. Science 2003;299:1027-9.
    • (2003) Science , vol.299 , pp. 1027-1029
    • Warren, L.A.1    Kauffman, M.E.2
  • 303
    • 84869508724 scopus 로고    scopus 로고
    • Quorum sensing and the confusion about diffusion
    • West SA, Winzer K, Gardner A et al. Quorum sensing and the confusion about diffusion. Trends Microbiol 2012;20:586-94.
    • (2012) Trends Microbiol , vol.20 , pp. 586-594
    • West, S.A.1    Winzer, K.2    Gardner, A.3
  • 304
    • 84859482899 scopus 로고    scopus 로고
    • Fungi as transport vectors for contaminants and contaminant-degrading bacteria
    • Timmis KN ed Berlin, Heidelberg: Springer Berlin Heidelberg
    • Wick LY, Furuno S, Harms H. Fungi as transport vectors for contaminants and contaminant-degrading bacteria. In: Timmis KN (ed.) Handbook of Hydrocarbon and Lipid Microbiology. Berlin, Heidelberg: Springer Berlin Heidelberg, 2010, 1555-61.
    • (2010) Handbook of Hydrocarbon and Lipid Microbiology , pp. 1555-1561
    • Wick, L.Y.1    Furuno, S.2    Harms, H.3
  • 305
    • 84961904331 scopus 로고    scopus 로고
    • Challenges in microbial ecology: Building predictive understanding of community functions and dynamics
    • Widder S, Allen RJ, Pfeiffer T et al. Challenges in microbial ecology: building predictive understanding of community functions and dynamics. ISME J 2016;10:2557-68.
    • (2016) ISME J , vol.10 , pp. 2557-2568
    • Widder, S.1    Allen, R.J.2    Pfeiffer, T.3
  • 306
    • 0035654216 scopus 로고    scopus 로고
    • Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development
    • Wieland G, Neumann R, Backhaus H. Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development. Appl Environ Microb 2001;67:5849-54.
    • (2001) Appl Environ Microb , vol.67 , pp. 5849-5854
    • Wieland, G.1    Neumann, R.2    Backhaus, H.3
  • 307
    • 84871175572 scopus 로고    scopus 로고
    • Bacterial communities in soil mimic patterns of vegetative succession and ecosystem climax but are resilient to change between seasons
    • Williams MA, Jangid K, Shanmugam SG et al. Bacterial communities in soil mimic patterns of vegetative succession and ecosystem climax but are resilient to change between seasons. Soil Biol Biochem 2013;57:749-57.
    • (2013) Soil Biol Biochem , vol.57 , pp. 749-757
    • Williams, M.A.1    Jangid, K.2    Shanmugam, S.G.3
  • 308
    • 0000111384 scopus 로고
    • Water potential and the respiration of microorganisms in the soil
    • Wilson JM, Griffin DM. Water potential and the respiration of microorganisms in the soil. Soil Biol Biochem 1975;7: 199-204.
    • (1975) Soil Biol Biochem , vol.7 , pp. 199-204
    • Wilson, J.M.1    Griffin, D.M.2
  • 309
    • 84894280251 scopus 로고    scopus 로고
    • Impact of matric potential and pore size distribution on growth dynamics of filamentous and non-filamentous soil bacteria
    • Wolf AB, Vos M, de Boer W et al. Impact of matric potential and pore size distribution on growth dynamics of filamentous and non-filamentous soil bacteria. PLoS One 2013; 8:e83661.
    • (2013) PLoS One , vol.8 , pp. e83661
    • Wolf, A.B.1    Vos, M.2    De Boer, W.3
  • 310
    • 0005774352 scopus 로고
    • Bacterial movement at high matric potentials-I. In artificial and natural soils
    • Wong PTW, Griffin DM. Bacterial movement at high matric potentials-I. In artificial and natural soils. Soil Biol Biochem 1976;8:215-8.
    • (1976) Soil Biol Biochem , vol.8 , pp. 215-218
    • Wong, P.T.W.1    Griffin, D.M.2
  • 311
    • 0028784056 scopus 로고
    • Role of pore size location in determining bacterial activity during predation by protozoa in soil
    • Wright D, Killham K, Glover LA et al. Role of pore size location in determining bacterial activity during predation by protozoa in soil. Appl Environ Microb 1995;61:3537-43.
    • (1995) Appl Environ Microb , vol.61 , pp. 3537-3543
    • Wright, D.1    Killham, K.2    Glover, L.A.3
  • 312
    • 84903376273 scopus 로고    scopus 로고
    • The quest for a unified view of bacterial land colonization
    • Wu H, Fang Y, Yu J et al. The quest for a unified view of bacterial land colonization. ISME J 2014a;8:1358-69.
    • (2014) ISME J , vol.8 , pp. 1358-1369
    • Wu, H.1    Fang, Y.2    Yu, J.3
  • 313
    • 84923019140 scopus 로고    scopus 로고
    • Direct and indirect effects of glomalin, mycorrhizal hyphae, and roots on aggregate stability in rhizosphere of trifoliate orange
    • Wu QS, Cao MQ, Zou YN et al. Direct and indirect effects of glomalin, mycorrhizal hyphae, and roots on aggregate stability in rhizosphere of trifoliate orange. Sci Rep 2014b;4: 5823.
    • (2014) Sci Rep , vol.4 , pp. 5823
    • Wu, Q.S.1    Cao, M.Q.2    Zou, Y.N.3
  • 314
    • 38649132267 scopus 로고    scopus 로고
    • Comparison of soil bacterial communities under diverse agricultural land management and crop production practices
    • Wu T, Chellemi DO, Graham JH et al. Comparison of soil bacterial communities under diverse agricultural land management and crop production practices. Microb Ecol 2008;55:293-310.
    • (2008) Microb Ecol , vol.55 , pp. 293-310
    • Wu, T.1    Chellemi, D.O.2    Graham, J.H.3
  • 315
    • 84877628657 scopus 로고    scopus 로고
    • A global analysis of soil microbial biomass carbon, nitrogen and phosphorus in terrestrial ecosystems
    • Xu X, Thornton PE, Post WM. A global analysis of soil microbial biomass carbon, nitrogen and phosphorus in terrestrial ecosystems. Global Ecol Biogeogr 2013;22:737-49.
    • (2013) Global Ecol Biogeogr , vol.22 , pp. 737-749
    • Xu, X.1    Thornton, P.E.2    Post, W.M.3
  • 316
    • 84974706115 scopus 로고    scopus 로고
    • Influence of salinity and water content on soil microorganisms
    • Yan N, Marschner P, Cao W et al. Influence of salinity and water content on soil microorganisms. Int Soil Wat Conserv Res 2015;3:316-23.
    • (2015) Int Soil Wat Conserv Res , vol.3 , pp. 316-323
    • Yan, N.1    Marschner, P.2    Cao, W.3
  • 317
    • 84993990216 scopus 로고    scopus 로고
    • Local environmental factors drive divergent grassland soil bacterial communities in the western Swiss Alps
    • Yashiro E, Pinto-Figueroa E, Buri A et al. Local environmental factors drive divergent grassland soil bacterial communities in the western Swiss Alps. Appl Environ Microb 2016;82:6303-16.
    • (2016) Appl Environ Microb , vol.82 , pp. 6303-6316
    • Yashiro, E.1    Pinto-Figueroa, E.2    Buri, A.3
  • 318
    • 84979922762 scopus 로고    scopus 로고
    • The holistic rhizosphere: Integrating zones, processes, and semantics in the soil influenced by roots
    • York LM, Carminati A, Mooney SJ et al. The holistic rhizosphere: Integrating zones, processes, and semantics in the soil influenced by roots. J Exp Bot 2016;67:3629-43.
    • (2016) J Exp Bot , vol.67 , pp. 3629-3643
    • York, L.M.1    Carminati, A.2    Mooney, S.J.3
  • 319
    • 0034095956 scopus 로고    scopus 로고
    • Tillage, habitat space and function of soil microbes
    • Young I, Ritz K. Tillage, habitat space and function of soil microbes. Soil Till Res 2000;53:201-13.
    • (2000) Soil Till Res , vol.53 , pp. 201-213
    • Young, I.1    Ritz, K.2
  • 320
    • 2942675265 scopus 로고    scopus 로고
    • Interactions and self-organization in the soil-microbe complex
    • Young IM, Crawford JW. Interactions and self-organization in the soil-microbe complex. Science 2004;304:1634-7.
    • (2004) Science , vol.304 , pp. 1634-1637
    • Young, I.M.1    Crawford, J.W.2
  • 321
    • 58949092783 scopus 로고    scopus 로고
    • Microbial distribution in soils: Physics and scaling
    • Donald LS ed. Cambridge, MA: Academic Press
    • Young IM, Crawford JW, Nunan N et al. Microbial distribution in soils: physics and scaling. In: Donald LS (ed). Advances in Agronomy, Vol. 100. Cambridge, MA: Academic Press, 2008, 81-121.
    • (2008) Advances in Agronomy , vol.100 , pp. 81-121
    • Young, I.M.1    Crawford, J.W.2    Nunan, N.3
  • 322
    • 0345016271 scopus 로고    scopus 로고
    • Plant diversity, soil microbial communities, and ecosystem function: Are there any links?
    • Zak DR, Holmes WE, White DC et al. Plant diversity, soil microbial communities, and ecosystem function: Are there any links? Ecology 2003;84:2042-50.
    • (2003) Ecology , vol.84 , pp. 2042-2050
    • Zak, D.R.1    Holmes, W.E.2    White, D.C.3
  • 323
    • 84977270544 scopus 로고    scopus 로고
    • Temperature mediates continental-scale diversity of microbes in forest soils
    • Zhou J, Deng Y, Shen L et al. Temperature mediates continental-scale diversity of microbes in forest soils. Nat Commun 2016;7:12083.
    • (2016) Nat Commun , vol.7 , pp. 12083
    • Zhou, J.1    Deng, Y.2    Shen, L.3
  • 324
    • 0036136025 scopus 로고    scopus 로고
    • Spatial and resource factors influencing high microbial diversity in soil
    • Zhou J, Xia B, Treves DS et al. Spatial and resource factors influencing high microbial diversity in soil. Appl Environ Microb 2002;68:326-34.
    • (2002) Appl Environ Microb , vol.68 , pp. 326-334
    • Zhou, J.1    Xia, B.2    Treves, D.S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.