메뉴 건너뛰기




Volumn 7, Issue 2, 2013, Pages 395-404

Hydration dynamics promote bacterial coexistence on rough surfaces

Author keywords

bacterial coexistence; diffusion; hydration dynamics; motility

Indexed keywords

WATER;

EID: 84872927594     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2012.115     Document Type: Article
Times cited : (76)

References (60)
  • 2
    • 67650825217 scopus 로고    scopus 로고
    • Towards a theory of biodiversity
    • Banavar JR, Maritan A. (2009). Towards a theory of biodiversity. Nature 460: 334-335.
    • (2009) Nature , vol.460 , pp. 334-335
    • Banavar, J.R.1    Maritan, A.2
  • 3
    • 77956880116 scopus 로고    scopus 로고
    • Drying-rewetting cycles affect fungal and bacterial growth differently in an arable soil
    • Bapiri A, Baath E, Rousk J. (2010). Drying-rewetting cycles affect fungal and bacterial growth differently in an arable soil. Microb Ecol 60: 419-428.
    • (2010) Microb Ecol , vol.60 , pp. 419-428
    • Bapiri, A.1    Baath, E.2    Rousk, J.3
  • 4
    • 0031553821 scopus 로고    scopus 로고
    • Mathematical model for characterization of bacterial migration through sand cores
    • Barton JW, Ford RM. (1997). Mathematical model for characterization of bacterial migration through sand cores. Biotechnol Bioeng 53: 487-496.
    • (1997) Biotechnol Bioeng , vol.53 , pp. 487-496
    • Barton, J.W.1    Ford, R.M.2
  • 5
    • 0031858966 scopus 로고    scopus 로고
    • Percolation theory and network modeling applications in soil physics
    • Berkowitz B, Ewing RP. (1998). Percolation theory and network modeling applications in soil physics. Surv Geophys 19: 23-72.
    • (1998) Surv Geophys , vol.19 , pp. 23-72
    • Berkowitz, B.1    Ewing, R.P.2
  • 6
    • 0043236194 scopus 로고    scopus 로고
    • Bacterial self-organization: Coenhancement of complexification and adaptability in a dynamic environment
    • Ben-Jacob E. (2003). Bacterial self-organization: coenhancement of complexification and adaptability in a dynamic environment. Phil Trans R Soc A 361: 1283-1312.
    • (2003) Phil Trans R Soc A , vol.361 , pp. 1283-1312
    • Ben-Jacob, E.1
  • 7
    • 0034935473 scopus 로고    scopus 로고
    • Flow in porous media: Pore-network models and multiphase flow
    • Blunt MJ. (2001). Flow in porous media: pore-network models and multiphase flow. Curr Opin Colloid Interface Sci 6: 197-207.
    • (2001) Curr Opin Colloid Interface Sci , vol.6 , pp. 197-207
    • Blunt, M.J.1
  • 10
    • 0141960308 scopus 로고    scopus 로고
    • Reduced water availability influences the dynamics, development, and ultrastructural properties of Pseudomonas putida biofilms
    • Chang WS, Halverson LJ. (2003). Reduced water availability influences the dynamics, development, and ultrastructural properties of Pseudomonas putida biofilms. J Bacteriol 185: 6199-6204.
    • (2003) J Bacteriol , vol.185 , pp. 6199-6204
    • Chang, W.S.1    Halverson, L.J.2
  • 11
    • 80355126340 scopus 로고    scopus 로고
    • Motility of Pseudomonas aeruginosa in saturated granular media as affected by chemoattractant
    • Chen J, Jin Y. (2011). Motility of Pseudomonas aeruginosa in saturated granular media as affected by chemoattractant. J Contam Hydrol 126: 113-120.
    • (2011) J Contam Hydrol , vol.126 , pp. 113-120
    • Chen, J.1    Jin, Y.2
  • 12
    • 0034503114 scopus 로고    scopus 로고
    • Mechanisms of maintenance of species diversity
    • Chesson P. (2000). Mechanisms of maintenance of species diversity. Annu Rev Ecol Evol Syst 31: 343-366.
    • (2000) Annu Rev Ecol Evol Syst , vol.31 , pp. 343-366
    • Chesson, P.1
  • 15
    • 2942566096 scopus 로고    scopus 로고
    • Prokaryotic diversity and its limits: Microbial community structure in nature and implications for microbial ecology
    • Curtis TP, Sloan WT. (2004). Prokaryotic diversity and its limits: microbial community structure in nature and implications for microbial ecology. Curr Opin Microbiol 7: 221-226.
    • (2004) Curr Opin Microbiol , vol.7 , pp. 221-226
    • Curtis, T.P.1    Sloan, W.T.2
  • 16
    • 57349190161 scopus 로고    scopus 로고
    • Bacterial flagella are firmly anchored
    • Darnton NC, Berg HC. (2008). Bacterial flagella are firmly anchored. J Bacteriol 190: 8223-8224.
    • (2008) J Bacteriol , vol.190 , pp. 8223-8224
    • Darnton, N.C.1    Berg, H.C.2
  • 17
    • 0026304237 scopus 로고
    • Measuring the diffusion coefficient of rhizosphere exudates in soil I. The diffusion of nonsorbing compounds
    • Darrah PR. (1991). Measuring the diffusion coefficient of rhizosphere exudates in soil. I. The diffusion of nonsorbing compounds. J Soil Sci 42: 413-420.
    • (1991) J Soil Sci , vol.42 , pp. 413-420
    • Darrah, P.R.1
  • 18
    • 50049099176 scopus 로고    scopus 로고
    • The porous surface model, a novel experimental system for online quantitative observation of microbial processes under unsaturated conditions
    • Dechesne A, Or D, Gulez G, Smets BF. (2008). The porous surface model, a novel experimental system for online quantitative observation of microbial processes under unsaturated conditions. Appl Environ Microbiol 74: 5195-5200.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 5195-5200
    • Dechesne, A.1    Or, D.2    Gulez, G.3    Smets, B.F.4
  • 19
  • 20
    • 0010239168 scopus 로고    scopus 로고
    • On the importance of taking space into account when modeling microbial competition in structured food products
    • Dens EJ, Van Impe JF. (2000). On the importance of taking space into account when modeling microbial competition in structured food products. Math Comput Simulat 53: 443-338.
    • (2000) Math Comput Simulat , vol.53 , pp. 443-338
    • Dens, E.J.1    Van Impe, J.F.2
  • 21
    • 13844257500 scopus 로고    scopus 로고
    • Soil water content and organic carbon availability are major determinants of soil microbial community composition
    • Drenovsky RE, Vo D, Graham KJ, Scow KM. (2004). Soil water content and organic carbon availability are major determinants of soil microbial community composition. Microb Ecol 48: 424-430.
    • (2004) Microb Ecol , vol.48 , pp. 424-430
    • Drenovsky, R.E.1    Vo, D.2    Graham, K.J.3    Scow, K.M.4
  • 22
    • 0038441327 scopus 로고    scopus 로고
    • Evolution experiments with microorganisms: The dynamics and genetic bases of adaptation
    • Elena SF, Lenski RE. (2003). Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation. Nat Rev Genet 4: 457-469.
    • (2003) Nat Rev Genet , vol.4 , pp. 457-469
    • Elena, S.F.1    Lenski, R.E.2
  • 23
    • 0037052487 scopus 로고    scopus 로고
    • Microbial behavior in a heterogeneous world
    • Fenchel T. (2002). Microbial behavior in a heterogeneous world. Science 296: 1068-1071.
    • (2002) Science , vol.296 , pp. 1068-1071
    • Fenchel, T.1
  • 24
    • 31444447130 scopus 로고    scopus 로고
    • The diversity and biogeography of soil bacterial communities
    • Fierer N, Jackson R. (2006). The diversity and biogeography of soil bacterial communities. Proc Natl Acad Sci USA 103: 626-631.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 626-631
    • Fierer, N.1    Jackson, R.2
  • 25
    • 79952751932 scopus 로고    scopus 로고
    • The generation and maintenance of diversity in microbial communities
    • Fierer N, Lennon JT. (2011). The generation and maintenance of diversity in microbial communities. Am J Bot 98: 439-448.
    • (2011) Am J Bot , vol.98 , pp. 439-448
    • Fierer, N.1    Lennon, J.T.2
  • 26
    • 0036274249 scopus 로고    scopus 로고
    • Effects of drying-rewetting frequency on soil carbon and nitrogen transformations
    • Fierer N, Schimel JP. (2002). Effects of drying-rewetting frequency on soil carbon and nitrogen transformations. Soil Biol Biochem 34: 777-787.
    • (2002) Soil Biol Biochem , vol.34 , pp. 777-787
    • Fierer, N.1    Schimel, J.P.2
  • 27
    • 0037270927 scopus 로고    scopus 로고
    • Influence of drying-rewetting frequency on soil bacterial community structure
    • Fierer N, Schimel JP, Holden PA. (2003). Influence of drying-rewetting frequency on soil bacterial community structure. Microb Ecol 45: 63-71.
    • (2003) Microb Ecol , vol.45 , pp. 63-71
    • Fierer, N.1    Schimel, J.P.2    Holden, P.A.3
  • 28
    • 36048999763 scopus 로고    scopus 로고
    • Drying and rewetting effects on soil microbial community composition and nutrient leaching
    • Gordon H, Haygarth PM, Bardgett RD. (2008). Drying and rewetting effects on soil microbial community composition and nutrient leaching. Soil Biol Biochem 40: 302-311.
    • (2008) Soil Biol Biochem , vol.40 , pp. 302-311
    • Gordon, H.1    Haygarth, P.M.2    Bardgett, R.D.3
  • 29
    • 73949111750 scopus 로고    scopus 로고
    • Bacterial competition: Surviving and thriving in the microbial jungle
    • Hibbing ME, Fuqua C, Parsek MR, Peterson SB. (2010). Bacterial competition: surviving and thriving in the microbial jungle. Nat Rev Microbiol 8: 15-25.
    • (2010) Nat Rev Microbiol , vol.8 , pp. 15-25
    • Hibbing, M.E.1    Fuqua, C.2    Parsek, M.R.3    Peterson, S.B.4
  • 30
    • 0000123207 scopus 로고
    • The paradox of the plankton
    • Hutchinson GE. (1961). The paradox of the plankton. Am Nat 95: 137-145.
    • (1961) Am Nat , vol.95 , pp. 137-145
    • Hutchinson, G.E.1
  • 31
    • 49249127270 scopus 로고    scopus 로고
    • Effect of drying and rewetting on bacterial growth rates in soil
    • Iovieno P, Baath E. (2008). Effect of drying and rewetting on bacterial growth rates in soil. FEMS Microbiol Ecol 65: 400-407.
    • (2008) FEMS Microbiol Ecol , vol.65 , pp. 400-407
    • Iovieno, P.1    Baath, E.2
  • 32
    • 39749192575 scopus 로고    scopus 로고
    • Self-organization in cell biology: A brief history
    • Karsenti E. (2008). Self-organization in cell biology: a brief history. Nat Rev Mol Cell Biol 9: 255-262.
    • (2008) Nat Rev Mol Cell Biol , vol.9 , pp. 255-262
    • Karsenti, E.1
  • 33
    • 0032436318 scopus 로고    scopus 로고
    • BacSim, a simulator for individual-based modelling of bacterial colony growth
    • Kreft JU, Booth G, Wimpenny JWT. (1998). BacSim, a simulator for individual-based modelling of bacterial colony growth. Microbiology 144: 3275-3287.
    • (1998) Microbiology , vol.144 , pp. 3275-3287
    • Kreft, J.U.1    Booth, G.2    Wimpenny, J.W.T.3
  • 35
    • 25844510196 scopus 로고    scopus 로고
    • Aquatic habitats and diffusion constraints affecting microbial coexistence in unsaturated porous media
    • Long T, Or D. (2005). Aquatic habitats and diffusion constraints affecting microbial coexistence in unsaturated porous media. Water Resour Res 41: W08408.
    • (2005) Water Resour Res , vol.41
    • Long, T.1    Or, D.2
  • 36
    • 33947627763 scopus 로고    scopus 로고
    • Microbial growth on partially saturated rough surfaces: Simulations in idealized roughness networks
    • Long T, Or D. (2007). Microbial growth on partially saturated rough surfaces: simulations in idealized roughness networks. Water Resour Res 43: W02409.
    • (2007) Water Resour Res , vol.43
    • Long, T.1    Or, D.2
  • 37
    • 68549117101 scopus 로고    scopus 로고
    • Dynamics of microbial growth and coexistence on variably saturated rough surfaces
    • Long T, Or D. (2009). Dynamics of microbial growth and coexistence on variably saturated rough surfaces. Microb Ecol 58: 262-275.
    • (2009) Microb Ecol , vol.58 , pp. 262-275
    • Long, T.1    Or, D.2
  • 39
    • 0034476849 scopus 로고    scopus 로고
    • Temporal and spatial fluctuation in moisture affect humus microfungal community structure in microcosms
    • McLean MA, Huhta V. (2000). Temporal and spatial fluctuation in moisture affect humus microfungal community structure in microcosms. Biol Fertil Soils 32: 114-119.
    • (2000) Biol Fertil Soils , vol.32 , pp. 114-119
    • McLean, M.A.1    Huhta, V.2
  • 40
    • 33644945189 scopus 로고    scopus 로고
    • Bacterial motility: Links to the environment and a driving force for microbial physics
    • Mitchell JG, Kogure K. (2006). Bacterial motility: links to the environment and a driving force for microbial physics. FEMS Microbiol Ecol 55: 3-16.
    • (2006) FEMS Microbiol Ecol , vol.55 , pp. 3-16
    • Mitchell, J.G.1    Kogure, K.2
  • 41
    • 0037986612 scopus 로고    scopus 로고
    • Modeling diffusion and reaction in soils: X. A unifying model for solute and gas diffusivity in unsaturated soil
    • Moldrup P, Olesen T, Komatsu T, Yoshikawa S, Schjønning P, Rolston DE. (2003). Modeling diffusion and reaction in soils: X. A unifying model for solute and gas diffusivity in unsaturated soil. Soil Sci 168: 321-337.
    • (2003) Soil Sci , vol.168 , pp. 321-337
    • Moldrup, P.1    Olesen, T.2    Komatsu, T.3    Yoshikawa, S.4    Schjønning, P.5    Rolston, D.E.6
  • 43
    • 34247169452 scopus 로고    scopus 로고
    • Physical constraints affecting bacterial habitats and activity in unsaturated porous media-A review
    • Or D, Smets BF, Wraith JM, Dechesne A, Friedman SP. (2007). Physical constraints affecting bacterial habitats and activity in unsaturated porous media-a review. Adv Water Resour 30: 1505-1527.
    • (2007) Adv Water Resour , vol.30 , pp. 1505-1527
    • Or, D.1    Smets, B.F.2    Wraith, J.M.3    Dechesne, A.4    Friedman, S.P.5
  • 44
    • 2442706975 scopus 로고    scopus 로고
    • Impact of soil drying-rewetting stress on microbial communities and activities and on degradation of two crop protection products
    • Pesaro M, Nicollier G, Zeyer J,Widmer F. (2004). Impact of soil drying-rewetting stress on microbial communities and activities and on degradation of two crop protection products. Appl Environ Microbiol 70: 2577-2587.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 2577-2587
    • Pesaro, M.1    Nicollier, G.2    Zeyer Jwidmer, F.3
  • 45
    • 70349414424 scopus 로고    scopus 로고
    • Evolution of diversity in spatially structured escherichia coli populations
    • Ponciano JM, La HJ, Joyce P, Forney LJ. (2009). Evolution of diversity in spatially structured Escherichia coli populations. Appl Environ Microbiol 75: 6047-6054.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 6047-6054
    • Ponciano, J.M.1    La, H.J.2    Joyce, P.3    Forney, L.J.4
  • 47
    • 34548305141 scopus 로고    scopus 로고
    • Mobility promotes and jeopardizes biodiversity in rock-paperscissors games
    • Reichenbach T, Mobilia M, Frey E. (2007). Mobility promotes and jeopardizes biodiversity in rock-paperscissors games. Nature 448: 1046-1049.
    • (2007) Nature , vol.448 , pp. 1046-1049
    • Reichenbach, T.1    Mobilia, M.2    Frey, E.3
  • 49
    • 0001409359 scopus 로고
    • Motility and chemotaxis of rhizobium meliloti in soil
    • Soby S, Bergman K. (1983). Motility and chemotaxis of Rhizobium meliloti in soil. Appl Environ Microbiol 46: 995-998.
    • (1983) Appl Environ Microbiol , vol.46 , pp. 995-998
    • Soby, S.1    Bergman, K.2
  • 50
    • 0002169635 scopus 로고    scopus 로고
    • Soil as an environment for microbial life
    • In: van Elsas JD, Trevors JT, Wellington EMH (eds). Marcel: New York
    • Stotzky G. (1997). Soil as an environment for microbial life. In: van Elsas JD, Trevors JT, Wellington EMH (eds). Modern Soil Microbiology. Marcel: New York, pp 1-20.
    • (1997) Modern Soil Microbiology , pp. 1-20
    • Stotzky, G.1
  • 51
    • 0037271271 scopus 로고    scopus 로고
    • A twospecies test of the hypothesis that spatial isolation influences microbial diversity in soil
    • Treves DS, Xia BC, Zhou JZ, Tie JM. (2003). A twospecies test of the hypothesis that spatial isolation influences microbial diversity in soil. Microb Ecol 45: 20-28.
    • (2003) Microb Ecol , vol.45 , pp. 20-28
    • Treves, D.S.1    Xia, B.C.2    Zhou, J.Z.3    Tie, J.M.4
  • 52
    • 0036270789 scopus 로고    scopus 로고
    • Microbial diversity and function in soil: From genes to ecosystems
    • Torsvik V, Ovreas L. (2002). Microbial diversity and function in soil: from genes to ecosystems. Curr Opin Microbiol 5: 240-245.
    • (2002) Curr Opin Microbiol , vol.5 , pp. 240-245
    • Torsvik, V.1    Ovreas, L.2
  • 53
    • 53149112557 scopus 로고    scopus 로고
    • Microbial diversity, life strategies, and adaptation to life in extreme soils
    • In: Dion P, Nautiyal CS (eds).. Springer: Berlin, Heidelberg
    • Torsvik V, Ovreas L. (2008). Microbial diversity, life strategies, and adaptation to life in extreme soils. In: Dion P, Nautiyal CS (eds). Microbiology of Extreme Soils. Springer: Berlin, Heidelberg, pp 15-43.
    • (2008) Microbiology of Extreme Soils , pp. 15-43
    • Torsvik, V.1    Ovreas, L.2
  • 54
    • 34250682211 scopus 로고    scopus 로고
    • Solitonlike and nonsoliton models of interaction of taxis waves
    • Tsyganov MA, Ivanitsky GR. (2006). Solitonlike and nonsoliton models of interaction of taxis waves. Biophysics 51: 887-891.
    • (2006) Biophysics , vol.51 , pp. 887-891
    • Tsyganov, M.A.1    Ivanitsky, G.R.2
  • 55
    • 43149118145 scopus 로고    scopus 로고
    • Natural variation of gliding motility in a centimeter-scale population of myxococcus xanthus
    • Vos M, Velicer GJ. (2008). Natural variation of gliding motility in a centimeter-scale population of Myxococcus xanthus. FEMS Microbiol Ecol 64: 343-350.
    • (2008) FEMS Microbiol Ecol , vol.64 , pp. 343-350
    • Vos, M.1    Velicer, G.J.2
  • 56
    • 0000678046 scopus 로고
    • Lotka-volterra population models
    • Wangersky PJ. (1978). Lotka-Volterra population models. Ann Rev Ecol Evol Syst 9: 189-218.
    • (1978) Ann Rev Ecol Evol Syst , vol.9 , pp. 189-218
    • Wangersky, P.J.1
  • 57
    • 77953646573 scopus 로고    scopus 로고
    • Aqueous films limit bacterial cell motility and colony expansion on partially saturated rough surfaces
    • Wang G, Or D. (2010). Aqueous films limit bacterial cell motility and colony expansion on partially saturated rough surfaces. Environ Microbiol 12: 1363-1373.
    • (2010) Environ Microbiol , vol.12 , pp. 1363-1373
    • Wang, G.1    Or, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.