메뉴 건너뛰기




Volumn 77, Issue 1, 2011, Pages 95-106

Influence of land-use intensityon the spatial distribution of N-cyclingmicroorganisms in grassland soils

Author keywords

Ammonia oxidizers; Denitrifiers; Geostatistics; Grassland; Land use intensity

Indexed keywords

AGRICULTURAL SOIL; COEXISTENCE; DENITRIFICATION; GEOSTATISTICS; GRASSLAND; LAND USE CHANGE; LIVESTOCK FARMING; MICROBIAL COMMUNITY; NICHE PARTITIONING; NITROGEN CYCLE; PROKARYOTE; SOIL MICROORGANISM; SPATIAL DISTRIBUTION;

EID: 79960768353     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1111/j.1574-6941.2011.01091.x     Document Type: Article
Times cited : (64)

References (55)
  • 1
    • 0242308319 scopus 로고    scopus 로고
    • Herbivore-mediated linkages between aboveground and belowground communities
    • Bardgett RD &Wardle DA (2003) Herbivore-mediated linkages between aboveground and belowground communities. Ecology 84: 2258-2268.
    • (2003) Ecology , vol.84 , pp. 2258-2268
    • Bardgett, R.D.1    Wardle, D.A.2
  • 2
    • 33646371732 scopus 로고    scopus 로고
    • Bacterial activity, community structure, and centimeter-scale spatial heterogeneity in contaminated soil
    • Becker JM, Parkin T, Nakatsu CH, Wilbur JD & Konopka A (2006) Bacterial activity, community structure, and centimeter-scale spatial heterogeneity in contaminated soil. Microb Ecol 51: 220-231.
    • (2006) Microb Ecol , vol.51 , pp. 220-231
    • Becker, J.M.1    Parkin, T.2    Nakatsu, C.H.3    Wilbur, J.D.4    Konopka, A.5
  • 3
    • 0025588892 scopus 로고
    • Nitrogen mineralization potentials of shrub-steppe soils with different disturbance histories
    • Bolton H Jr, Wildung RE & Smith JL (1990) Nitrogen mineralization potentials of shrub-steppe soils with different disturbance histories. Soil Sci Soc Am J 54: 887-891.
    • (1990) Soil Sci Soc Am J , vol.54 , pp. 887-891
    • Bolton Jr., H.1    Wildung, R.E.2    Smith, J.L.3
  • 4
    • 0027831179 scopus 로고
    • Soil microbial biomass and activity of a disturbed and undisturbed shrub-steppe ecosystem
    • Bolton H Jr, Smith JL & Link SO (1993) Soil microbial biomass and activity of a disturbed and undisturbed shrub-steppe ecosystem. Soil Biol Biochem 25: 545-552.
    • (1993) Soil Biol Biochem , vol.25 , pp. 545-552
    • Bolton Jr., H.1    Smith, J.L.2    Link, S.O.3
  • 5
    • 35948950775 scopus 로고    scopus 로고
    • Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil
    • Bremer C, Braker G, Matthies D, Reuter A, Engels C & Conrad R (2007) Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil. Appl Environ Microb 73: 6878-6884.
    • (2007) Appl Environ Microb , vol.73 , pp. 6878-6884
    • Bremer, C.1    Braker, G.2    Matthies, D.3    Reuter, A.4    Engels, C.5    Conrad, R.6
  • 6
    • 34648830589 scopus 로고    scopus 로고
    • Relative abundances of proteobacterial membrane-bound and periplasmic nitrate reductases in selected environments
    • Bru D, Sarr A & Philippot L (2007) Relative abundances of proteobacterial membrane-bound and periplasmic nitrate reductases in selected environments. Appl Environ Microb 73: 5971-5974.
    • (2007) Appl Environ Microb , vol.73 , pp. 5971-5974
    • Bru, D.1    Sarr, A.2    Philippot, L.3
  • 10
    • 77950263969 scopus 로고    scopus 로고
    • Soil resources influence spatial patterns of denitrifying communities at scales compatible with land management
    • Enwall K, Throbäck IN, Stenberg M, Söderström M & Hallin S (2010) Soil resources influence spatial patterns of denitrifying communities at scales compatible with land management. Appl Environ Microb 76: 2243-2250.
    • (2010) Appl Environ Microb , vol.76 , pp. 2243-2250
    • Enwall, K.1    Throbäck, I.N.2    Stenberg, M.3    Söderström, M.4    Hallin, S.5
  • 13
    • 31444447130 scopus 로고    scopus 로고
    • The diversity and biogeography of soil bacterial communities
    • Fierer N & Jackson RB (2006) The diversity and biogeography of soil bacterial communities. P Natl Acad Sci USA 103: 626-623.
    • (2006) P Natl Acad Sci USA , vol.103 , pp. 626-623
    • Fierer, N.1    Jackson, R.B.2
  • 14
    • 77957157533 scopus 로고    scopus 로고
    • Implementing large-scale and long-term functional biodiversity research: the Biodiversity Exploratories
    • Fischer M, Bossdorf O, Gockel S et al. (2010) Implementing large-scale and long-term functional biodiversity research: the Biodiversity Exploratories. Basic Appl Ecol 11: 473-485.
    • (2010) Basic Appl Ecol , vol.11 , pp. 473-485
    • Fischer, M.1    Bossdorf, O.2    Gockel, S.3
  • 15
    • 0031704564 scopus 로고    scopus 로고
    • Ungulate vs. landscape control of soil C and N processes in grasslands of Yellowstone National Park
    • Frank DA & Groffmann PM (1998) Ungulate vs. landscape control of soil C and N processes in grasslands of Yellowstone National Park. Ecology 79: 2229-2241.
    • (1998) Ecology , vol.79 , pp. 2229-2241
    • Frank, D.A.1    Groffmann, P.M.2
  • 16
    • 0037721460 scopus 로고    scopus 로고
    • Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern Virginia agricultural field
    • Franklin RB & Mills AL (2003) Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern Virginia agricultural field. FEMS Microbiol Ecol 44: 335-346.
    • (2003) FEMS Microbiol Ecol , vol.44 , pp. 335-346
    • Franklin, R.B.1    Mills, A.L.2
  • 17
    • 0027238091 scopus 로고
    • Copper-containing nitrite reductase from Pseudomonas aureofaciens is functional in a mutationally cytochrome cd1-free background (NirS-) of Pseudomonas stutzeri
    • Glockner AB, Jüngst A & Zumft WG (1993) Copper-containing nitrite reductase from Pseudomonas aureofaciens is functional in a mutationally cytochrome cd1-free background (NirS-) of Pseudomonas stutzeri. Arch Microbiol 160: 18-26.
    • (1993) Arch Microbiol , vol.160 , pp. 18-26
    • Glockner, A.B.1    Jüngst, A.2    Zumft, W.G.3
  • 18
    • 0033780249 scopus 로고    scopus 로고
    • --oxidizing bacteria and serotypes at the millimeter scale along a soil transect
    • --oxidizing bacteria and serotypes at the millimeter scale along a soil transect. FEMS Microbiol Ecol 34: 57-62.
    • (2000) FEMS Microbiol Ecol , vol.34 , pp. 57-62
    • Grundmann, G.1    Debouzie, D.2
  • 19
    • 78049277482 scopus 로고    scopus 로고
    • Archaea rather than bacteria control nitrification in two agricultural acidic soils
    • Gubry-Rangin C, Nicol GW & Prosser J (2010) Archaea rather than bacteria control nitrification in two agricultural acidic soils. FEMS Microbiol Ecol 74: 566-574.
    • (2010) FEMS Microbiol Ecol , vol.74 , pp. 566-574
    • Gubry-Rangin, C.1    Nicol, G.W.2    Prosser, J.3
  • 21
    • 67349287510 scopus 로고    scopus 로고
    • Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment
    • Hallin S, Jones CM, Schloter M & Philippot L (2009) Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment. ISME J 3: 597-605.
    • (2009) ISME J , vol.3 , pp. 597-605
    • Hallin, S.1    Jones, C.M.2    Schloter, M.3    Philippot, L.4
  • 22
    • 34547686149 scopus 로고    scopus 로고
    • Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices
    • He J, Shen J, Zhang L, Zhu Y, Zheng Y, Xu M & Di H (2007) Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices. Environ Microbiol 9: 2364-2374.
    • (2007) Environ Microbiol , vol.9 , pp. 2364-2374
    • He, J.1    Shen, J.2    Zhang, L.3    Zhu, Y.4    Zheng, Y.5    Xu, M.6    Di, H.7
  • 23
    • 5644239930 scopus 로고    scopus 로고
    • Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR
    • Corrigendum in J Microbiol Meth 6 (2005): 289-290
    • Henry S, Baudoin E, López-Gutiérrez JC, Martin-Laurent F, Brauman A & Philippot L (2004) Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR. J Microbiol Meth 59: 327-335 Corrigendum in J Microbiol Meth 6 (2005): 289-290.
    • (2004) J Microbiol Meth , vol.59 , pp. 327-335
    • Henry, S.1    Baudoin, E.2    López-Gutiérrez, J.C.3    Martin-Laurent, F.4    Brauman, A.5    Philippot, L.6
  • 24
    • 33747335398 scopus 로고    scopus 로고
    • Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils
    • Henry S, Bru D, Stres B, Hallet S & Philippot L (2006) Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils. Appl Environ Microb 72: 5181-5189.
    • (2006) Appl Environ Microb , vol.72 , pp. 5181-5189
    • Henry, S.1    Bru, D.2    Stres, B.3    Hallet, S.4    Philippot, L.5
  • 25
    • 0035144174 scopus 로고    scopus 로고
    • Quantification of ammonia-oxidizing bacteria in arable soil by real-time PCR
    • Hermansson A & Lindgren P-E (2001) Quantification of ammonia-oxidizing bacteria in arable soil by real-time PCR. Appl Environ Microb 67: 972-976.
    • (2001) Appl Environ Microb , vol.67 , pp. 972-976
    • Hermansson, A.1    Lindgren, P.-E.2
  • 27
    • 0029666976 scopus 로고    scopus 로고
    • The fumigation-extraction method to estimate soil microbial biomass: Calibration of the KEC value
    • Joergensen RG (1996) The fumigation-extraction method to estimate soil microbial biomass: Calibration of the KEC value. Soil Biol Biochem 28: 25-31.
    • (1996) Soil Biol Biochem , vol.28 , pp. 25-31
    • Joergensen, R.G.1
  • 28
    • 0029666980 scopus 로고    scopus 로고
    • The fumigation-extraction method to estimate soil microbial biomass: Calibration of the KEN value
    • Joergensen RG & Müller T (1996) The fumigation-extraction method to estimate soil microbial biomass: Calibration of the KEN value. Soil Biol Biochem 28: 33-37.
    • (1996) Soil Biol Biochem , vol.28 , pp. 33-37
    • Joergensen, R.G.1    Müller, T.2
  • 29
    • 49749112308 scopus 로고    scopus 로고
    • Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification
    • Jones CM, Stres B, Rosenquist M & Hallin S (2008) Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification. Mol Biol Evol 25: 1955-1966.
    • (2008) Mol Biol Evol , vol.25 , pp. 1955-1966
    • Jones, C.M.1    Stres, B.2    Rosenquist, M.3    Hallin, S.4
  • 30
    • 33748792525 scopus 로고    scopus 로고
    • Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland
    • Kandeler E, Deiglmayr K, Tscherko D, Bru D & Philippot L (2006) Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland. Appl Environ Microb 72: 5957-5962.
    • (2006) Appl Environ Microb , vol.72 , pp. 5957-5962
    • Kandeler, E.1    Deiglmayr, K.2    Tscherko, D.3    Bru, D.4    Philippot, L.5
  • 32
    • 0242655009 scopus 로고    scopus 로고
    • Stimulation of soil nitrification and denitrification by grazing in grasslands: do changes in plant species composition matter?
    • Le Roux X, Bardy M, Loiseau P & Louault F (2003) Stimulation of soil nitrification and denitrification by grazing in grasslands: do changes in plant species composition matter? Oecologia 137: 417-425.
    • (2003) Oecologia , vol.137 , pp. 417-425
    • Le Roux, X.1    Bardy, M.2    Loiseau, P.3    Louault, F.4
  • 35
    • 72449157066 scopus 로고    scopus 로고
    • Denitrifier community dynamics in soil aggregates under permanent grassland and arable cropping systems
    • Miller MN, Zebarth BJ, Dandie CE, Burton DL, Goyer C & Trevors JT (2009) Denitrifier community dynamics in soil aggregates under permanent grassland and arable cropping systems. Soil Sci Soc Am J 73: 1843-1851.
    • (2009) Soil Sci Soc Am J , vol.73 , pp. 1843-1851
    • Miller, M.N.1    Zebarth, B.J.2    Dandie, C.E.3    Burton, D.L.4    Goyer, C.5    Trevors, J.T.6
  • 36
    • 52949137846 scopus 로고    scopus 로고
    • The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
    • Nicol GW, Leininger S, Schleper C & Prosser JI (2008) The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol 10: 2966-2978.
    • (2008) Environ Microbiol , vol.10 , pp. 2966-2978
    • Nicol, G.W.1    Leininger, S.2    Schleper, C.3    Prosser, J.I.4
  • 37
    • 33745488833 scopus 로고    scopus 로고
    • Effects of plant species diversity and composition on nitrogen cycling and the trace gas balance of soils
    • Niklaus PA, Wardle DA &Tate KR (2006) Effects of plant species diversity and composition on nitrogen cycling and the trace gas balance of soils. Plant Soil 282: 83-98.
    • (2006) Plant Soil , vol.282 , pp. 83-98
    • Niklaus, P.A.1    Wardle, D.A.2    Tate, K.R.3
  • 38
    • 20044388327 scopus 로고    scopus 로고
    • Effects of grazing on microbial functional groups involved in soil N dynamics
    • Patra AK, Abbadie L, Clays-Josserand A et al. (2005) Effects of grazing on microbial functional groups involved in soil N dynamics. Ecol Monogr 75: 65-80.
    • (2005) Ecol Monogr , vol.75 , pp. 65-80
    • Patra, A.K.1    Abbadie, L.2    Clays-Josserand, A.3
  • 39
    • 0037184270 scopus 로고    scopus 로고
    • Denitrifying genes in bacterial and archaeal genomes
    • Philippot L (2002) Denitrifying genes in bacterial and archaeal genomes. BBA-Gene Struct Expr 1577: 355-376.
    • (2002) BBA-Gene Struct Expr , vol.1577 , pp. 355-376
    • Philippot, L.1
  • 40
    • 0033040979 scopus 로고    scopus 로고
    • Dissimilatory nitrate reductases in bacteria
    • Philippot L & Højberg O (1999) Dissimilatory nitrate reductases in bacteria. Biochim Biophys Acta 1446: 1-23.
    • (1999) Biochim Biophys Acta , vol.1446 , pp. 1-23
    • Philippot, L.1    Højberg, O.2
  • 41
    • 35148888713 scopus 로고    scopus 로고
    • Ecology of denitrifying prokaryotes in agricultural soil
    • Philippot L, Hallin S & Schloter M(2007) Ecology of denitrifying prokaryotes in agricultural soil. Adv Agron 96: 249-305.
    • (2007) Adv Agron , vol.96 , pp. 249-305
    • Philippot, L.1    Hallin, S.2    Schloter, M.3
  • 42
    • 71249135203 scopus 로고    scopus 로고
    • Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree
    • Philippot L, Bru D, Saby NP, Cuhel J, Arrouays D, Šimek M & Hallin S (2009a) Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree. Environ Microbiol 11: 3096-3104.
    • (2009) Environ Microbiol , vol.11 , pp. 3096-3104
    • Philippot, L.1    Bru, D.2    Saby, N.P.3    Cuhel, J.4    Arrouays, D.5    Šimek, M.6    Hallin, S.7
  • 44
    • 43649096060 scopus 로고    scopus 로고
    • Dynamics of litter carbon turnover and microbial abundance in a rye detritusphere
    • Poll C, Marhan S, Ingwersen J & Kandeler E (2008) Dynamics of litter carbon turnover and microbial abundance in a rye detritusphere. Soil Biol Biochem 40: 1306-1321.
    • (2008) Soil Biol Biochem , vol.40 , pp. 1306-1321
    • Poll, C.1    Marhan, S.2    Ingwersen, J.3    Kandeler, E.4
  • 45
    • 5344244656 scopus 로고    scopus 로고
    • R Development Core Team, R Foundation for Statistical Computing, Vienna,. Austria. Available at
    • R Development Core Team (2008) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. Available at http://www.R-project.org.
    • (2008) R: A language and environment for statistical computing
  • 46
    • 3142722201 scopus 로고    scopus 로고
    • Spatial structure in soil chemical and microbiological properties in an upland grassland
    • Ritz K, McNicol J, Nunan N et al. (2004) Spatial structure in soil chemical and microbiological properties in an upland grassland. FEMS Microbiol Ecol 49: 191-205.
    • (2004) FEMS Microbiol Ecol , vol.49 , pp. 191-205
    • Ritz, K.1    McNicol, J.2    Nunan, N.3
  • 47
    • 84972496336 scopus 로고
    • That BLUP is a good thing: the estimation of random effects
    • Robinson GK (1991) That BLUP is a good thing: the estimation of random effects. Stat Sci 6: 15-32.
    • (1991) Stat Sci , vol.6 , pp. 15-32
    • Robinson, G.K.1
  • 48
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations
    • Rotthauwe J, Witzel K & Liesack W (1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microb 63: 4704-4712.
    • (1997) Appl Environ Microb , vol.63 , pp. 4704-4712
    • Rotthauwe, J.1    Witzel, K.2    Liesack, W.3
  • 49
    • 0004282518 scopus 로고    scopus 로고
    • SAS Institute Inc. SAS Institute Inc, Cary, NC
    • SAS Institute Inc. (1999) SAS/STAT® User's Guide, Version 9.2. SAS Institute Inc, Cary, NC.
    • (1999) SAS/STAT® User's Guide, Version 9.2
  • 51
    • 77956095401 scopus 로고    scopus 로고
    • Ammonia oxidation: different niches for archaea and bacteria?
    • Schleper C (2010) Ammonia oxidation: different niches for archaea and bacteria? ISME J 4: 1092-1094
    • (2010) ISME J , vol.4 , pp. 1092-1094
    • Schleper, C.1
  • 52
    • 0001197512 scopus 로고
    • Perspectives on measurement of denitrification in the field including recommended protocols for acetylene based methods
    • Tiedje J, Simkins S & Groffman P (1989) Perspectives on measurement of denitrification in the field including recommended protocols for acetylene based methods. Plant Soil 115: 261-284.
    • (1989) Plant Soil , vol.115 , pp. 261-284
    • Tiedje, J.1    Simkins, S.2    Groffman, P.3
  • 53
    • 28644435323 scopus 로고    scopus 로고
    • Novel genes for nitrite reductase and Amorelated proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
    • Treusch AH, Leininger S, Kletzin A, Schuster SC, Klenk HP & Schleper C (2005) Novel genes for nitrite reductase and Amorelated proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling. Environ Microbiol 7: 1985-1995.
    • (2005) Environ Microbiol , vol.7 , pp. 1985-1995
    • Treusch, A.H.1    Leininger, S.2    Kletzin, A.3    Schuster, S.C.4    Klenk, H.P.5    Schleper, C.6
  • 54
    • 0023488186 scopus 로고
    • An extraction method for measuring soil microbial biomass C
    • Vance ED, Brookes PC & Jenkinson DS (1987) An extraction method for measuring soil microbial biomass C. Soil Biol Biochem 19: 703-707.
    • (1987) Soil Biol Biochem , vol.19 , pp. 703-707
    • Vance, E.D.1    Brookes, P.C.2    Jenkinson, D.S.3
  • 55
    • 0031456471 scopus 로고    scopus 로고
    • Cell biology and molecular basis of denitrification
    • Zumft W (1997) Cell biology and molecular basis of denitrification. Microbiol Mol Biol R 61: 533-616.
    • (1997) Microbiol Mol Biol R , vol.61 , pp. 533-616
    • Zumft, W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.