메뉴 건너뛰기




Volumn 77, Issue 22, 2017, Pages 6330-6339

Genome-wide CRISPR screen for essential cell growth mediators in mutant KRAS colorectal cancers

Author keywords

[No Author keywords available]

Indexed keywords

KETOHEXOKINASE; NICOTINAMIDE ADENINE DINUCLEOTIDE; DNA HELICASE; FRUCTOKINASE; INO80 PROTEIN, HUMAN; KRAS PROTEIN, HUMAN; NICOTINAMIDE; NICOTINAMIDE ADENINE DINUCLEOTIDE KINASE; PHOSPHOTRANSFERASE; PROTEIN P21; THIONICOTINAMIDE;

EID: 85033791261     PISSN: 00085472     EISSN: 15387445     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-17-2043     Document Type: Article
Times cited : (86)

References (43)
  • 1
    • 84927609396 scopus 로고    scopus 로고
    • RAS synthetic lethal screens revisited: Still seeking the elusive prize?
    • Downward J. RAS synthetic lethal screens revisited: still seeking the elusive prize? Clin Cancer Res 2015;21:1802–9.
    • (2015) Clin Cancer Res , vol.21 , pp. 1802-1809
    • Downward, J.1
  • 3
    • 84873729095 scopus 로고    scopus 로고
    • Multiplex genome engineering using CRISPR/Cas systems
    • Cong L, Ran FA, Cox D, Lin S, Barretto R, Habib N, et al. Multiplex genome engineering using CRISPR/Cas systems. Science 2013;339:819–23.
    • (2013) Science , vol.339 , pp. 819-823
    • Cong, L.1    Ran, F.A.2    Cox, D.3    Lin, S.4    Barretto, R.5    Habib, N.6
  • 4
  • 6
    • 84957605863 scopus 로고    scopus 로고
    • Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
    • Doench JG, Fusi N, Sullender M, Hegde M, Vaimberg EW, Donovan KF, et al. Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9. Nat Biotechnol 2016;34:184–91.
    • (2016) Nat Biotechnol , vol.34 , pp. 184-191
    • Doench, J.G.1    Fusi, N.2    Sullender, M.3    Hegde, M.4    Vaimberg, E.W.5    Donovan, K.F.6
  • 7
    • 84949233942 scopus 로고    scopus 로고
    • High-resolution CRISPR screens reveal fitness genes and genotype-specific cancer liabilities
    • Hart T, Chandrashekhar M, Aregger M, Steinhart Z, Brown KR, MacLeod G, et al. High-resolution CRISPR screens reveal fitness genes and genotype-specific cancer liabilities. Cell 2015;163:1515–26.
    • (2015) Cell , vol.163 , pp. 1515-1526
    • Hart, T.1    Chandrashekhar, M.2    Aregger, M.3    Steinhart, Z.4    Brown, K.R.5    MacLeod, G.6
  • 8
    • 84905262730 scopus 로고    scopus 로고
    • Improved vectors and genome-wide libraries for CRISPR screening
    • Sanjana NE, Shalem O, Zhang F. Improved vectors and genome-wide libraries for CRISPR screening. Nat Methods 2014;11:783–4.
    • (2014) Nat Methods , vol.11 , pp. 783-784
    • Sanjana, N.E.1    Shalem, O.2    Zhang, F.3
  • 10
    • 84947471999 scopus 로고    scopus 로고
    • Identification and characterization of essential genes in the human genome
    • Wang T, Birsoy K, Hughes NW, Krupczak KM, Post Y, Wei JJ, et al. Identification and characterization of essential genes in the human genome. Science 2015;350:1096–101.
    • (2015) Science , vol.350 , pp. 1096-1101
    • Wang, T.1    Birsoy, K.2    Hughes, N.W.3    Krupczak, K.M.4    Post, Y.5    Wei, J.J.6
  • 11
    • 84925008880 scopus 로고    scopus 로고
    • Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis
    • Chen S, Sanjana NE, Zheng K, Shalem O, Lee K, Shi X, et al. Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis. Cell 2015;160:1246–60.
    • (2015) Cell , vol.160 , pp. 1246-1260
    • Chen, S.1    Sanjana, N.E.2    Zheng, K.3    Shalem, O.4    Lee, K.5    Shi, X.6
  • 12
    • 79960394818 scopus 로고    scopus 로고
    • Inhibitors of ketohexokinase: Discovery of pyrimidinopyrimidines with specific substitution that complements the ATP-binding site
    • Maryanoff BE, O'Neill JC, McComsey DF, Yabut SC, Luci DK, Jordan AD Jr, et al. Inhibitors of ketohexokinase: discovery of pyrimidinopyrimidines with specific substitution that complements the ATP-binding site. ACS Med Chem Lett 2011;2:538–43.
    • (2011) ACS Med Chem Lett , vol.2 , pp. 538-543
    • Maryanoff, B.E.1    O'Neill, J.C.2    McComsey, D.F.3    Yabut, S.C.4    Luci, D.K.5    Jr, J.A.D.6
  • 13
    • 84989828686 scopus 로고    scopus 로고
    • MiR-1298 inhibits mutant KRAS-driven tumor growth by repressing FAK and LAMB3
    • Zhou Y, Dang J, Chang KY, Yau E, Aza-Blanc P, Moscat J, et al. miR-1298 inhibits mutant KRAS-driven tumor growth by repressing FAK and LAMB3. Cancer Res 2016;76:5777–87.
    • (2016) Cancer Res , vol.76 , pp. 5777-5787
    • Zhou, Y.1    Dang, J.2    Chang, K.Y.3    Yau, E.4    Aza-Blanc, P.5    Moscat, J.6
  • 14
    • 84905274395 scopus 로고    scopus 로고
    • Measuring error rates in genomic perturbation screens: Gold standards for human functional genomics
    • Hart T, Brown KR, Sircoulomb F, Rottapel R, Moffat J. Measuring error rates in genomic perturbation screens: gold standards for human functional genomics. Mol Syst Biol 2014;10:733.
    • (2014) Mol Syst Biol , vol.10 , pp. 733
    • Hart, T.1    Brown, K.R.2    Sircoulomb, F.3    Rottapel, R.4    Moffat, J.5
  • 16
    • 84860321700 scopus 로고    scopus 로고
    • Oncogenic Kras maintains pancreatic tumors through regulation of anabolic glucose metabolism
    • Ying H, Kimmelman AC, Lyssiotis CA, Hua S, Chu GC, Fletcher-Sananikone E, et al. Oncogenic Kras maintains pancreatic tumors through regulation of anabolic glucose metabolism. Cell 2012;149:656–70.
    • (2012) Cell , vol.149 , pp. 656-670
    • Ying, H.1    Kimmelman, A.C.2    Lyssiotis, C.A.3    Hua, S.4    Chu, G.C.5    Fletcher-Sananikone, E.6
  • 18
    • 84947920445 scopus 로고    scopus 로고
    • Suppression of cytosolic NADPH pool by thionicotinamide increases oxidative stress and synergizes with chemotherapy
    • Tedeschi PM, Lin H, Gounder M, Kerrigan JE, Abali EE, Scotto K, et al. Suppression of cytosolic NADPH pool by thionicotinamide increases oxidative stress and synergizes with chemotherapy. Mol Pharmacol 2015;88:720–7.
    • (2015) Mol Pharmacol , vol.88 , pp. 720-727
    • Tedeschi, P.M.1    Lin, H.2    Gounder, M.3    Kerrigan, J.E.4    Abali, E.E.5    Scotto, K.6
  • 19
    • 84979988451 scopus 로고    scopus 로고
    • Fructokinase A acts as a protein kinase to promote nucleotide synthesis
    • Li X, Qian X, Lu Z. Fructokinase A acts as a protein kinase to promote nucleotide synthesis. Cell Cycle 2016;15:2689–90.
    • (2016) Cell Cycle , vol.15 , pp. 2689-2690
    • Li, X.1    Qian, X.2    Lu, Z.3
  • 22
    • 84991099377 scopus 로고    scopus 로고
    • Merlin, a regulator of Hippo signaling, regulates Wnt/ b-catenin signaling
    • Kim S, Jho E-H. Merlin, a regulator of Hippo signaling, regulates Wnt/ b-catenin signaling. BMB Rep 2016;49:357–8.
    • (2016) BMB Rep , vol.49 , pp. 357-358
    • Kim, S.1    Jho, E.-H.2
  • 23
    • 84975505315 scopus 로고    scopus 로고
    • Loss of tumor suppressor Merlin results in aberrant activation of Wnt/b-catenin signaling in cancer
    • Morrow KA, Das S, Meng E, Menezes ME, Bailey SK, Metge BJ, et al. Loss of tumor suppressor Merlin results in aberrant activation of Wnt/b-catenin signaling in cancer. Oncotarget 2016;7:17991–8005.
    • (2016) Oncotarget , vol.7 , pp. 17991-18005
    • Morrow, K.A.1    Das, S.2    Meng, E.3    Menezes, M.E.4    Bailey, S.K.5    Metge, B.J.6
  • 24
    • 84963795930 scopus 로고    scopus 로고
    • Merlin/NF2-Lin28B-let-7 is a tumor-suppressive pathway that is cell-density dependent and hippo independent
    • Hikasa H, Sekido Y, Suzuki A. Merlin/NF2-Lin28B-let-7 is a tumor-suppressive pathway that is cell-density dependent and hippo independent. Cell Rep 2016;14:2950–61.
    • (2016) Cell Rep , vol.14 , pp. 2950-2961
    • Hikasa, H.1    Sekido, Y.2    Suzuki, A.3
  • 25
    • 84892853050 scopus 로고    scopus 로고
    • Ral and Rheb GTPase activating proteins integrate mTOR and GTPase signaling in aging, autophagy, and tumor cell invasion
    • Martin TD, Chen X-W, Kaplan REW, Saltiel AR, Walker CL, Reiner DJ, et al. Ral and Rheb GTPase activating proteins integrate mTOR and GTPase signaling in aging, autophagy, and tumor cell invasion. Mol Cell 2014;53:209–20.
    • (2014) Mol Cell , vol.53 , pp. 209-220
    • Martin, T.D.1    Chen, X.-W.2    Kaplan, R.E.W.3    Saltiel, A.R.4    Walker, C.L.5    Reiner, D.J.6
  • 26
    • 84868019043 scopus 로고    scopus 로고
    • Cancer cell metabolism: One hallmark, many faces
    • Cantor JR, Sabatini DM. Cancer cell metabolism: one hallmark, many faces. Cancer Discov 2012;2:881–98.
    • (2012) Cancer Discov , vol.2 , pp. 881-898
    • Cantor, J.R.1    Sabatini, D.M.2
  • 29
    • 84949679802 scopus 로고    scopus 로고
    • Vitamin C selectively kills KRAS and BRAF mutant colorectal cancer cells by targeting GAPDH
    • Yun J, Mullarky E, Lu C, Bosch KN, Kavalier A, Rivera K, et al. Vitamin C selectively kills KRAS and BRAF mutant colorectal cancer cells by targeting GAPDH. Science 2015;350:1391–6.
    • (2015) Science , vol.350 , pp. 1391-1396
    • Yun, J.1    Mullarky, E.2    Lu, C.3    Bosch, K.N.4    Kavalier, A.5    Rivera, K.6
  • 32
    • 0034637482 scopus 로고    scopus 로고
    • The splicing factor U1C represses EWS/FLI-mediated transactivation
    • Knoop LL, Baker SJ. The splicing factor U1C represses EWS/FLI-mediated transactivation. J Biol Chem 2000;275:24865–71.
    • (2000) J Biol Chem , vol.275 , pp. 24865-24871
    • Knoop, L.L.1    Baker, S.J.2
  • 33
    • 0037016674 scopus 로고    scopus 로고
    • The EWS/NOR1 fusion gene product gains a novel activity affecting pre-mRNA splicing
    • Ohkura N, Yaguchi H, Tsukada T, Yamaguchi K. The EWS/NOR1 fusion gene product gains a novel activity affecting pre-mRNA splicing. J Biol Chem 2002;277:535–43.
    • (2002) J Biol Chem , vol.277 , pp. 535-543
    • Ohkura, N.1    Yaguchi, H.2    Tsukada, T.3    Yamaguchi, K.4
  • 34
    • 0041672262 scopus 로고    scopus 로고
    • Functional analysis of the EWS/ETS target gene uridine phosphorylase
    • Deneen B, Hamidi H, Denny CT. Functional analysis of the EWS/ETS target gene uridine phosphorylase. Cancer Res 2003;63:4268–74.
    • (2003) Cancer Res , vol.63 , pp. 4268-4274
    • Deneen, B.1    Hamidi, H.2    Denny, C.T.3
  • 35
    • 0034648695 scopus 로고    scopus 로고
    • Interference with the constitutive activation of ERK1 and ERK2 impairs EWS/FLI-1-dependent transformation
    • Silvany RE, Eliazer S, Wolff NC, Ilaria RL. Interference with the constitutive activation of ERK1 and ERK2 impairs EWS/FLI-1-dependent transformation. Oncogene 2000;19:4523–30.
    • (2000) Oncogene , vol.19 , pp. 4523-4530
    • Silvany, R.E.1    Eliazer, S.2    Wolff, N.C.3    Ilaria, R.L.4
  • 37
    • 33750378322 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 Vpr induces G2 checkpoint activation by interacting with the splicing factor SAP145
    • Terada Y, Yasuda Y. Human immunodeficiency virus type 1 Vpr induces G2 checkpoint activation by interacting with the splicing factor SAP145. Mol Cell Biol 2006;26:8149–58.
    • (2006) Mol Cell Biol , vol.26 , pp. 8149-8158
    • Terada, Y.1    Yasuda, Y.2
  • 38
    • 78651394912 scopus 로고    scopus 로고
    • Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    • Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, et al. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. Cancer Res 2011;71:78–86.
    • (2011) Cancer Res , vol.71 , pp. 78-86
    • Persson, H.1    Kvist, A.2    Rego, N.3    Staaf, J.4    Vallon-Christersson, J.5    Luts, L.6
  • 39
    • 84988410997 scopus 로고    scopus 로고
    • INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer
    • Zhang S, Zhou B, Wang L, Li P, Bennett BD, Snyder R, et al. INO80 is required for oncogenic transcription and tumor growth in non-small cell lung cancer. Oncogene 2017;36:1430–9.
    • (2017) Oncogene , vol.36 , pp. 1430-1439
    • Zhang, S.1    Zhou, B.2    Wang, L.3    Li, P.4    Bennett, B.D.5    Snyder, R.6
  • 40
    • 84975717751 scopus 로고    scopus 로고
    • INO80 governs superenhancer-mediated oncogenic transcription and tumor growth in melanoma
    • Zhou B, Wang L, Zhang S, Bennett BD, He F, Zhang Y, et al. INO80 governs superenhancer-mediated oncogenic transcription and tumor growth in melanoma. Genes Dev 2016;30:1440–53.
    • (2016) Genes Dev , vol.30 , pp. 1440-1453
    • Zhou, B.1    Wang, L.2    Zhang, S.3    Bennett, B.D.4    He, F.5    Zhang, Y.6
  • 41
    • 84994908321 scopus 로고    scopus 로고
    • Monoubiquitination of histone H2B blocks eviction of histone variant H2A.Z from inducible enhancers
    • Segala G, Bennesch MA, Pandey DP, Hulo N, Picard D. Monoubiquitination of histone H2B blocks eviction of histone variant H2A.Z from inducible enhancers. Mol Cell 2016;64:334–46.
    • (2016) Mol Cell , vol.64 , pp. 334-346
    • Segala, G.1    Bennesch, M.A.2    Pandey, D.P.3    Hulo, N.4    Picard, D.5
  • 42
    • 84960407051 scopus 로고    scopus 로고
    • The INO80 complex requires the Arp5-Ies6 subcomplex for chromatin remodeling and metabolic regulation
    • Yao W, King DA, Beckwith SL, Gowans GJ, Yen K, Zhou C, et al. The INO80 complex requires the Arp5-Ies6 subcomplex for chromatin remodeling and metabolic regulation. Mol Cell Biol 2016;36:979–91.
    • (2016) Mol Cell Biol , vol.36 , pp. 979-991
    • Yao, W.1    King, D.A.2    Beckwith, S.L.3    Gowans, G.J.4    Yen, K.5    Zhou, C.6
  • 43
    • 84923064365 scopus 로고    scopus 로고
    • The Ino80 complex prevents invasion of euchromatin into silent chromatin
    • Xue Y, Van C, Pradhan SK, Su T, Gehrke J, Kuryan BG, et al. The Ino80 complex prevents invasion of euchromatin into silent chromatin. Genes Dev 2015;29:350–5.
    • (2015) Genes Dev , vol.29 , pp. 350-355
    • Xue, Y.1    Van, C.2    Pradhan, S.K.3    Su, T.4    Gehrke, J.5    Kuryan, B.G.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.