-
1
-
-
84902603107
-
Stem cell plasticity. Plasticity of epithelial stem cells in tissue regeneration
-
Blanpain, C. & Fuchs, E. Stem cell plasticity. Plasticity of epithelial stem cells in tissue regeneration. Science 344, 1242281 (2014).
-
(2014)
Science
, vol.344
, pp. 1242281
-
-
Blanpain, C.1
Fuchs, E.2
-
2
-
-
84891802435
-
Lineage analysis of epidermal stem cells. Cold Spring Harb
-
Alcolea, M. P. & Jones, P. H. Lineage analysis of epidermal stem cells. Cold Spring Harb. Perspect. Med. 4, a015206 (2014).
-
(2014)
Perspect. Med
, vol.4
, pp. a015206
-
-
Alcolea, M.P.1
Jones, P.H.2
-
3
-
-
84929211885
-
Pioneer factors govern super-enhancer dynamics in stem cell plasticity and lineage choice
-
Adam, R. C. et al. Pioneer factors govern super-enhancer dynamics in stem cell plasticity and lineage choice. Nature 521, 366-370 (2015).
-
(2015)
Nature
, vol.521
, pp. 366-370
-
-
Adam, R.C.1
-
4
-
-
84905730523
-
Emerging interactions between skin stem cells and their niches
-
Hsu, Y.-C., Li, L. & Fuchs, E. Emerging interactions between skin stem cells and their niches. Nat. Med. 20, 847-856 (2014).
-
(2014)
Nat. Med
, vol.20
, pp. 847-856
-
-
Hsu, Y.-C.1
Li, L.2
Fuchs, E.3
-
5
-
-
32944462834
-
Bacterial RNA and small antiviral compounds activate caspase-1 through cryopyrin/Nalp3
-
Kanneganti, T.-D. et al. Bacterial RNA and small antiviral compounds activate caspase-1 through cryopyrin/Nalp3. Nature 440, 233-236 (2006).
-
(2006)
Nature
, vol.440
, pp. 233-236
-
-
Kanneganti, T.-D.1
-
6
-
-
66949162673
-
Imiquimod-induced psoriasis-like skin inflammation in mice is mediated via the IL-23/IL-17 axis
-
van der Fits, L. et al. Imiquimod-induced psoriasis-like skin inflammation in mice is mediated via the IL-23/IL-17 axis. J. Immunol. 182, 5836-5845 (2009).
-
(2009)
J. Immunol
, vol.182
, pp. 5836-5845
-
-
Van Der Fits, L.1
-
7
-
-
84896320691
-
TLRs to cytokines: Mechanistic insights from the imiquimod mouse model of psoriasis
-
Flutter, B. & Nestle, F. O. TLRs to cytokines: mechanistic insights from the imiquimod mouse model of psoriasis. Eur. J. Immunol. 43, 3138-3146 (2013).
-
(2013)
Eur. J. Immunol
, vol.43
, pp. 3138-3146
-
-
Flutter, B.1
Nestle, F.O.2
-
8
-
-
0033587776
-
The magical touch: Genome targeting in epidermal stem cells induced by tamoxifen application to mouse skin
-
Vasioukhin, V., Degenstein, L., Wise, B. & Fuchs, E. The magical touch: genome targeting in epidermal stem cells induced by tamoxifen application to mouse skin. Proc. Natl Acad. Sci. USA 96, 8551-8556 (1999).
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 8551-8556
-
-
Vasioukhin, V.1
Degenstein, L.2
Wise, B.3
Fuchs, E.4
-
9
-
-
33746792458
-
Topical vitamin D3 and low-calcemic analogs induce thymic stromal lymphopoietin in mouse keratinocytes and trigger an atopic dermatitis
-
Li, M. et al. Topical vitamin D3 and low-calcemic analogs induce thymic stromal lymphopoietin in mouse keratinocytes and trigger an atopic dermatitis. Proc. Natl Acad. Sci. USA 103, 11736-11741 (2006).
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 11736-11741
-
-
Li, M.1
-
10
-
-
84899475081
-
Peripheral inflammation is associated with remote global gene expression changes in the brain
-
Thomson, C. A., McColl, A., Cavanagh, J. & Graham, G. J. Peripheral inflammation is associated with remote global gene expression changes in the brain. J. Neuroinflammation 11, 73 (2014).
-
(2014)
J. Neuroinflammation
, vol.11
, pp. 73
-
-
Thomson, C.A.1
McColl, A.2
Cavanagh, J.3
Graham, G.J.4
-
11
-
-
34247631592
-
Epidermal stem cells arise from the hair follicle after wounding
-
Levy, V., Lindon, C., Zheng, Y., Harfe, B. D. & Morgan, B. A. Epidermal stem cells arise from the hair follicle after wounding. FASEB J. 21, 1358-1366 (2007).
-
(2007)
FASEB J
, vol.21
, pp. 1358-1366
-
-
Levy, V.1
Lindon, C.2
Zheng, Y.3
Harfe, B.D.4
Morgan, B.A.5
-
12
-
-
84928704650
-
Commensal-dendritic-cell interaction specifies a unique protective skin immune signature
-
Naik, S. et al. Commensal-dendritic-cell interaction specifies a unique protective skin immune signature. Nature 520, 104-108 (2015).
-
(2015)
Nature
, vol.520
, pp. 104-108
-
-
Naik, S.1
-
13
-
-
84995769352
-
Impaired epidermal to dendritic T cell signaling slows wound repair in aged skin
-
Keyes, B. E. et al. Impaired epidermal to dendritic T cell signaling slows wound repair in aged skin. Cell 167, 1323-1338 (2016).
-
(2016)
Cell
, vol.167
, pp. 1323-1338
-
-
Keyes, B.E.1
-
14
-
-
84980332319
-
Murine model of wound healing
-
Dunn, L. et al. Murine model of wound healing. J. Vis. Exp. 75, 50265 (2013).
-
(2013)
J. Vis. Exp
, vol.75
, pp. 50265
-
-
Dunn, L.1
-
15
-
-
84865559289
-
Compartmentalized control of skin immunity by resident commensals
-
Naik, S. et al. Compartmentalized control of skin immunity by resident commensals. Science 337, 1115-1119 (2012).
-
(2012)
Science
, vol.337
, pp. 1115-1119
-
-
Naik, S.1
-
16
-
-
84920747918
-
Resident memory T cells in human health and disease
-
Clark, R. A. Resident memory T cells in human health and disease. Sci. Transl Med. 7, 269rv1 (2015).
-
(2015)
Sci. Transl Med
, vol.7
, pp. 269rv1
-
-
Clark, R.A.1
-
17
-
-
84964787418
-
Trained immunity: A program of innate immune memory in health and disease
-
Netea, M. G. et al. Trained immunity: A program of innate immune memory in health and disease. Science 352, aaf1098 (2016).
-
(2016)
Science
, vol.352
, pp. aaf1098
-
-
Netea, M.G.1
-
18
-
-
84949212255
-
ATAC-seq: A method for assaying chromatin accessibility genome-wide
-
Buenrostro, J. D., Wu, B., Chang, H. Y. & Greenleaf, W. J. ATAC-seq: A method for assaying chromatin accessibility genome-wide. Curr. Protoc. Mol. Biol. 109, 21.29.1-21.29.9 (2015).
-
(2015)
Curr. Protoc. Mol. Biol
, vol.109
, pp. 21291-21299
-
-
Buenrostro, J.D.1
Wu, B.2
Chang, H.Y.3
Greenleaf, W.J.4
-
19
-
-
84866127830
-
Identifying ChIP-seq enrichment using MACS
-
Feng, J., Liu, T., Qin, B., Zhang, Y. & Liu, X. S. Identifying ChIP-seq enrichment using MACS. Nat. Protocols 7, 1728-1740 (2012).
-
(2012)
Nat. Protocols
, vol.7
, pp. 1728-1740
-
-
Feng, J.1
Liu, T.2
Qin, B.3
Zhang, Y.4
Liu, X.S.5
-
20
-
-
77952214662
-
GREAT improves functional interpretation of cis-regulatory regions
-
McLean, C. Y. et al. GREAT improves functional interpretation of cis-regulatory regions. Nat. Biotechnol. 28, 495-501 (2010).
-
(2010)
Nat. Biotechnol
, vol.28
, pp. 495-501
-
-
McLean, C.Y.1
-
21
-
-
77952567987
-
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
-
Heinz, S. et al. Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol. Cell 38, 576-589 (2010).
-
(2010)
Mol. Cell
, vol.38
, pp. 576-589
-
-
Heinz, S.1
-
22
-
-
77954534273
-
Rapid functional dissection of genetic networks via tissue-specific transduction and RNAi in mouse embryos
-
Beronja, S., Livshits, G., Williams, S. & Fuchs, E. Rapid functional dissection of genetic networks via tissue-specific transduction and RNAi in mouse embryos. Nat. Med. 16, 821-827 (2010).
-
(2010)
Nat. Med
, vol.16
, pp. 821-827
-
-
Beronja, S.1
Livshits, G.2
Williams, S.3
Fuchs, E.4
-
23
-
-
0030775488
-
Cloning a novel member of the human interferoninducible gene family associated with control of tumorigenicity in a model of human melanoma
-
DeYoung, K. L. et al. Cloning a novel member of the human interferoninducible gene family associated with control of tumorigenicity in a model of human melanoma. Oncogene 15, 453-457 (1997).
-
(1997)
Oncogene
, vol.15
, pp. 453-457
-
-
DeYoung, K.L.1
-
24
-
-
84956825823
-
AIM2 inflammasome in infection, cancer, and autoimmunity: Role in DNA sensing, inflammation, and innate immunity
-
Man, S. M., Karki, R. & Kanneganti, T.-D. AIM2 inflammasome in infection, cancer, and autoimmunity: role in DNA sensing, inflammation, and innate immunity. Eur. J. Immunol. 46, 269-280 (2016).
-
(2016)
Eur. J. Immunol
, vol.46
, pp. 269-280
-
-
Man, S.M.1
Karki, R.2
Kanneganti, T.-D.3
-
25
-
-
79955897768
-
Cytosolic DNA triggers inflammasome activation in keratinocytes in psoriatic lesions
-
Dombrowski, Y. et al. Cytosolic DNA triggers inflammasome activation in keratinocytes in psoriatic lesions. Sci. Transl Med. 3, 82ra38 (2011).
-
(2011)
Sci. Transl Med
, vol.3
, pp. 82ra38
-
-
Dombrowski, Y.1
-
26
-
-
84934346989
-
Critical role for the DNA sensor AIM2 in stem cell proliferation and cancer
-
Man, S. M. et al. Critical role for the DNA sensor AIM2 in stem cell proliferation and cancer. Cell 162, 45-58 (2015).
-
(2015)
Cell
, vol.162
, pp. 45-58
-
-
Man, S.M.1
-
27
-
-
84938996802
-
Inflammasome-independent role of AIM2 in suppressing colon tumorigenesis via DNA-PK and Akt
-
Wilson, J. E. et al. Inflammasome-independent role of AIM2 in suppressing colon tumorigenesis via DNA-PK and Akt. Nat. Med. 21, 906-913 (2015).
-
(2015)
Nat. Med
, vol.21
, pp. 906-913
-
-
Wilson, J.E.1
-
28
-
-
84994507182
-
The DNA-sensing AIM2 inflammasome controls radiation-induced cell death and tissue injury
-
Hu, B. et al. The DNA-sensing AIM2 inflammasome controls radiation-induced cell death and tissue injury. Science 354, 765-768 (2016).
-
(2016)
Science
, vol.354
, pp. 765-768
-
-
Hu, B.1
-
29
-
-
84963642471
-
The caspase-1 inhibitor AC-YVAD-CMK attenuates acute gastric injury in mice: Involvement of silencing NLRP3 inflammasome activities
-
Zhang, F. et al. The caspase-1 inhibitor AC-YVAD-CMK attenuates acute gastric injury in mice: involvement of silencing NLRP3 inflammasome activities. Sci. Rep. 6, 24166 (2016).
-
(2016)
Sci. Rep
, vol.6
, pp. 24166
-
-
Zhang, F.1
-
30
-
-
85018571651
-
Stem cell lineage infidelity drives wound repair and cancer
-
e14
-
Ge, Y. et al. Stem cell lineage infidelity drives wound repair and cancer. Cell 169, 636-650.e14 (2017).
-
(2017)
Cell
, vol.169
, pp. 636-650
-
-
Ge, Y.1
-
31
-
-
84988622178
-
Germline NLRP1 mutations cause skin inflammatory and cancer susceptibility syndromes via inflammasome activation
-
Zhong, F. L. et al. Germline NLRP1 mutations cause skin inflammatory and cancer susceptibility syndromes via inflammasome activation. Cell 167, 187-202.e17 (2016).
-
(2016)
Cell
, vol.167
, pp. 187-187e17
-
-
Zhong, F.L.1
-
32
-
-
85022194008
-
Tumor cell-specific AIM2 regulates growth and invasion of cutaneous squamous cell carcinoma
-
Farshchian, M. et al. Tumor cell-specific AIM2 regulates growth and invasion of cutaneous squamous cell carcinoma. Oncotarget 8, 45825-45836 (2017).
-
(2017)
Oncotarget
, vol.8
, pp. 45825-45836
-
-
Farshchian, M.1
-
33
-
-
21444454735
-
A Cre-inducible diphtheria toxin receptor mediates cell lineage ablation after toxin administration
-
Buch, T. et al. A Cre-inducible diphtheria toxin receptor mediates cell lineage ablation after toxin administration. Nat. Methods 2, 419-426 (2005).
-
(2005)
Nat. Methods
, vol.2
, pp. 419-426
-
-
Buch, T.1
-
34
-
-
45149109643
-
In vivo equilibrium of proinflammatory IL-17+ and regulatory IL-10+ Foxp3+ RORγt+ T cells
-
Lochner, M. et al. In vivo equilibrium of proinflammatory IL-17+ and regulatory IL-10+ Foxp3+ RORγt+ T cells. J. Exp. Med. 205, 1381-1393 (2008).
-
(2008)
J. Exp. Med
, vol.205
, pp. 1381-1393
-
-
Lochner, M.1
-
35
-
-
84891904882
-
Identification of cancer initiating cells in K-Ras driven lung adenocarcinoma
-
Mainardi, S. et al. Identification of cancer initiating cells in K-Ras driven lung adenocarcinoma. Proc. Natl Acad. Sci. USA 111, 255-260 (2014).
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. 255-260
-
-
Mainardi, S.1
-
36
-
-
33749065765
-
Tcf3 governs stem cell features and represses cell fate determination in skin
-
Nguyen, H., Rendl, M. & Fuchs, E. Tcf3 governs stem cell features and represses cell fate determination in skin. Cell 127, 171-183 (2006).
-
(2006)
Cell
, vol.127
, pp. 171-183
-
-
Nguyen, H.1
Rendl, M.2
Fuchs, E.3
-
37
-
-
3042856262
-
Cre reporter strains produced by targeted insertion of EYFP and ECFP into the ROSA26 locus
-
Srinivas, S. et al. Cre reporter strains produced by targeted insertion of EYFP and ECFP into the ROSA26 locus. BMC Dev. Biol. 1, 4 (2001).
-
(2001)
BMC Dev. Biol
, vol.1
, pp. 4
-
-
Srinivas, S.1
-
38
-
-
0034660250
-
Inhibition of caspase-1-like activity by Ac-Tyr-Val-Ala-Aspchloromethyl ketone induces long-lasting neuroprotection in cerebral ischemia through apoptosis reduction and decrease of proinflammatory cytokines
-
Rabuffetti, M. et al. Inhibition of caspase-1-like activity by Ac-Tyr-Val-Ala-Aspchloromethyl ketone induces long-lasting neuroprotection in cerebral ischemia through apoptosis reduction and decrease of proinflammatory cytokines. J. Neurosci. 20, 4398-4404 (2000).
-
(2000)
J. Neurosci
, vol.20
, pp. 4398-4404
-
-
Rabuffetti, M.1
-
39
-
-
59749096851
-
Isolation and culture of epithelial stem cells
-
Nowak, J. A. & Fuchs, E. Isolation and culture of epithelial stem cells. Methods Mol. Biol. 482, 215-232 (2009).
-
(2009)
Methods Mol. Biol
, vol.482
, pp. 215-232
-
-
Nowak, J.A.1
Fuchs, E.2
-
40
-
-
0017349282
-
Epidermal growth factor and the multiplication of cultured human epidermal keratinocytes
-
Rheinwald, J. G. & Green, H. Epidermal growth factor and the multiplication of cultured human epidermal keratinocytes. Nature 265, 421-424 (1977).
-
(1977)
Nature
, vol.265
, pp. 421-424
-
-
Rheinwald, J.G.1
Green, H.2
-
41
-
-
84871809302
-
STAR ultrafast universal RNA-seq aligner
-
Dobin, A. et al. STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29, 15-21 (2013).
-
(2013)
Bioinformatics
, vol.29
, pp. 15-21
-
-
Dobin, A.1
-
42
-
-
84924629414
-
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
-
Love, M. I., Huber, W. & Anders, S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 15, 550 (2014).
-
(2014)
Genome Biol
, vol.15
, pp. 550
-
-
Love, M.I.1
Huber, W.2
Anders, S.3
-
43
-
-
84888877924
-
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
-
Buenrostro, J. D., Giresi, P. G., Zaba, L. C., Chang, H. Y. & Greenleaf, W. J. Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nat. Methods 10, 1213-1218 (2013).
-
(2013)
Nat. Methods
, vol.10
, pp. 1213-1218
-
-
Buenrostro, J.D.1
Giresi, P.G.2
Zaba, L.C.3
Chang, H.Y.4
Greenleaf, W.J.5
-
44
-
-
70349871718
-
CEAS: Cis-regulatory element annotation system
-
Shin, H., Liu, T., Manrai, A. K. & Liu, X. S. CEAS: cis-regulatory element annotation system. Bioinformatics 25, 2605-2606 (2009).
-
(2009)
Bioinformatics
, vol.25
, pp. 2605-2606
-
-
Shin, H.1
Liu, T.2
Manrai, A.K.3
Liu, X.S.4
-
45
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS
-
Zhang, Y. et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 9, R137 (2008).
-
(2008)
Genome Biol
, vol.9
, pp. R137
-
-
Zhang, Y.1
-
46
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
Eisen, M. B., Spellman, P. T., Brown, P. O. & Botstein, D. Cluster analysis and display of genome-wide expression patterns. Proc. Natl Acad. Sci. USA 95, 14863-14868 (1998).
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
47
-
-
84976878634
-
The UCSC Genome Browser database: 2016 update
-
Speir, M. L. et al. The UCSC Genome Browser database: 2016 update. Nucleic Acids Res. 44, D717-D725 (2016).
-
(2016)
Nucleic Acids Res
, vol.44
, pp. D717-D725
-
-
Speir, M.L.1
|