-
1
-
-
35349014587
-
Molecular signature of CD8+ T cell exhaustion during chronic viral infection
-
Wherry, E.J. et al. Molecular signature of CD8+ T cell exhaustion during chronic viral infection. Immunity 27, 670-684 (2007).
-
(2007)
Immunity
, vol.27
, pp. 670-684
-
-
Wherry, E.J.1
-
2
-
-
22944433872
-
Aberrant T cell differentiation in the absence of Dicer
-
Muljo, S.A. et al. Aberrant T cell differentiation in the absence of Dicer. J. Exp. Med. 202, 261-269 (2005).
-
(2005)
J. Exp. Med.
, vol.202
, pp. 261-269
-
-
Muljo, S.A.1
-
3
-
-
20844432885
-
T cell lineage choice and differentiation in the absence of the RNase III enzyme Dicer
-
Cobb, B.S. et al. T cell lineage choice and differentiation in the absence of the RNase III enzyme Dicer. J. Exp. Med. 201, 1367-1373 (2005).
-
(2005)
J. Exp. Med.
, vol.201
, pp. 1367-1373
-
-
Cobb, B.S.1
-
4
-
-
78650754295
-
Dicer controls CD8+ T-cell activation, migration, and survival
-
Zhang, N. & Bevan, M.J. Dicer controls CD8+ T-cell activation, migration, and survival. Proc. Natl. Acad. Sci. USA 107, 21629-21634 (2010).
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 21629-21634
-
-
Zhang, N.1
Bevan, M.J.2
-
5
-
-
84862533928
-
Temporal expression of microRNA cluster miR-17-92 regulates effector and memory CD8+ T-cell differentiation
-
Wu, T. et al. Temporal expression of microRNA cluster miR-17-92 regulates effector and memory CD8+ T-cell differentiation. Proc. Natl. Acad. Sci. USA 109, 9965-9970 (2012).
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 9965-9970
-
-
Wu, T.1
-
6
-
-
84866354593
-
MiR-146a controls the resolution of T cell responses in mice
-
Yang, L. et al. miR-146a controls the resolution of T cell responses in mice. J. Exp. Med. 209, 1655-1670 (2012).
-
(2012)
J. Exp. Med.
, vol.209
, pp. 1655-1670
-
-
Yang, L.1
-
7
-
-
33747608638
-
NF-B-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses
-
Taganov, K.D., Boldin, M.P., Chang, K.J. & Baltimore, D. NF-B-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses. Proc. Natl. Acad. Sci. USA 103, 12481-12486 (2006).
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 12481-12486
-
-
Taganov, K.D.1
Boldin, M.P.2
Chang, K.J.3
Baltimore, D.4
-
8
-
-
84878259075
-
The microRNA miR-155 controls CD8+ T cell responses by regulating interferon signaling
-
Gracias, D.T. et al. The microRNA miR-155 controls CD8+ T cell responses by regulating interferon signaling. Nat. Immunol. 14, 593-602 (2013).
-
(2013)
Nat. Immunol.
, vol.14
, pp. 593-602
-
-
Gracias, D.T.1
-
9
-
-
58149268107
-
Foxp3-dependent microRNA155 confers competitive fitness to regulatory T cells by targeting SOCS1 protein
-
Lu, L.F. et al. Foxp3-dependent microRNA155 confers competitive fitness to regulatory T cells by targeting SOCS1 protein. Immunity 30, 80-91 (2009).
-
(2009)
Immunity
, vol.30
, pp. 80-91
-
-
Lu, L.F.1
-
10
-
-
84887485410
-
MicroRNA-directed program of cytotoxic CD8+ T-cell differentiation
-
Trifari, S. et al. MicroRNA-directed program of cytotoxic CD8+ T-cell differentiation. Proc. Natl. Acad. Sci. USA 110, 18608-18613 (2013).
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 18608-18613
-
-
Trifari, S.1
-
11
-
-
84874573555
-
T cell activation induces proteasomal degradation of Argonaute and rapid remodeling of the microRNA repertoire
-
Bronevetsky, Y. et al. T cell activation induces proteasomal degradation of Argonaute and rapid remodeling of the microRNA repertoire. J. Exp. Med. 210, 417-432 (2013).
-
(2013)
J. Exp. Med.
, vol.210
, pp. 417-432
-
-
Bronevetsky, Y.1
-
12
-
-
0036773634
-
NFAT1 and NFAT2 are positive regulators of IL-4 gene transcription
-
Monticelli, S. & Rao, A. NFAT1 and NFAT2 are positive regulators of IL-4 gene transcription. Eur. J. Immunol. 32, 2971-2978 (2002).
-
(2002)
Eur. J. Immunol.
, vol.32
, pp. 2971-2978
-
-
Monticelli, S.1
Rao, A.2
-
13
-
-
84923026945
-
The transcription factor NFAT promotes exhaustion of activated CD8+ T cells
-
Martinez, G.J. et al. The transcription factor NFAT promotes exhaustion of activated CD8+ T cells. Immunity 42, 265-278 (2015).
-
(2015)
Immunity
, vol.42
, pp. 265-278
-
-
Martinez, G.J.1
-
14
-
-
85006747281
-
Dynamic changes in chromatin accessibility occur in CD8+ T cells responding to viral infection
-
Scott-Browne, J.P. et al. Dynamic changes in chromatin accessibility occur in CD8+ T cells responding to viral infection. Immunity 45, 1327-1340 (2016).
-
(2016)
Immunity
, vol.45
, pp. 1327-1340
-
-
Scott-Browne, J.P.1
-
15
-
-
74049088856
-
Lost in translation: An assessment and perspective for computational microRNA target identification
-
Alexiou, P., Maragkakis, M., Papadopoulos, G.L., Reczko, M. & Hatzigeorgiou, A.G. Lost in translation: an assessment and perspective for computational microRNA target identification. Bioinformatics 25, 3049-3055 (2009).
-
(2009)
Bioinformatics
, vol.25
, pp. 3049-3055
-
-
Alexiou, P.1
Maragkakis, M.2
Papadopoulos, G.L.3
Reczko, M.4
Hatzigeorgiou, A.G.5
-
16
-
-
49949116902
-
The impact of microRNAs on protein output
-
Baek, D. et al. The impact of microRNAs on protein output. Nature 455, 64-71 (2008).
-
(2008)
Nature
, vol.455
, pp. 64-71
-
-
Baek, D.1
-
17
-
-
49949117302
-
Widespread changes in protein synthesis induced by microRNAs
-
Selbach, M. et al. Widespread changes in protein synthesis induced by microRNAs. Nature 455, 58-63 (2008).
-
(2008)
Nature
, vol.455
, pp. 58-63
-
-
Selbach, M.1
-
18
-
-
13944282215
-
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
-
Lim, L.P. et al. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature 433, 769-773 (2005).
-
(2005)
Nature
, vol.433
, pp. 769-773
-
-
Lim, L.P.1
-
19
-
-
84954604181
-
MiR-31 reduces cell growth of papillary thyroid carcinoma by RNA-binding protein HuR
-
Wu, D., Wang, B., Shang, J., Song, J. & Zhang, H. miR-31 reduces cell growth of papillary thyroid carcinoma by RNA-binding protein HuR. Clin. Lab. 61, 1625-1634 (2015).
-
(2015)
Clin. Lab.
, vol.61
, pp. 1625-1634
-
-
Wu, D.1
Wang, B.2
Shang, J.3
Song, J.4
Zhang, H.5
-
20
-
-
77950202790
-
Molecular profiling uncovers a p53-associated role for microRNA-31 in inhibiting the proliferation of serous ovarian carcinomas and other cancers
-
Creighton, C.J. et al. Molecular profiling uncovers a p53-associated role for microRNA-31 in inhibiting the proliferation of serous ovarian carcinomas and other cancers. Cancer Res. 70, 1906-1915 (2010).
-
(2010)
Cancer Res.
, vol.70
, pp. 1906-1915
-
-
Creighton, C.J.1
-
21
-
-
77954926304
-
Pro-tumorigenic effects of miR-31 loss in mesothelioma
-
Ivanov, S.V. et al. Pro-tumorigenic effects of miR-31 loss in mesothelioma. J. Biol. Chem. 285, 22809-22817 (2010).
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 22809-22817
-
-
Ivanov, S.V.1
-
22
-
-
77951154173
-
MicroRNA-31 functions as an oncogenic microRNA in mouse and human lung cancer cells by repressing specific tumor suppressors
-
Liu, X. et al. MicroRNA-31 functions as an oncogenic microRNA in mouse and human lung cancer cells by repressing specific tumor suppressors. J. Clin. Invest. 120, 1298-1309 (2010).
-
(2010)
J. Clin. Invest.
, vol.120
, pp. 1298-1309
-
-
Liu, X.1
-
23
-
-
84960452731
-
Identification of microRNAs associated with allergic airway disease using a genetically diverse mouse population
-
Rutledge, H. et al. Identification of microRNAs associated with allergic airway disease using a genetically diverse mouse population. BMC Genomics 16, 633 (2015).
-
(2015)
BMC Genomics
, vol.16
, pp. 633
-
-
Rutledge, H.1
-
24
-
-
84939947684
-
Prostaglandin E2 and programmed cell death 1 signaling coordinately impair CTL function and survival during chronic viral infection
-
Chen, J.H. et al. Prostaglandin E2 and programmed cell death 1 signaling coordinately impair CTL function and survival during chronic viral infection. Nat. Med. 21, 327-334 (2015).
-
(2015)
Nat. Med.
, vol.21
, pp. 327-334
-
-
Chen, J.H.1
-
25
-
-
84986285632
-
A distinct gene module for dysfunction uncoupled from activation in tumor-infiltrating T cells
-
Singer, M., Wang, C., Cong, L., Marjanovic, N.D., Kowalczyk, M.S. & Zhang, H. et al. A distinct gene module for dysfunction uncoupled from activation in tumor-infiltrating T cells. Cell 166, 1500-1511 (2016).
-
(2016)
Cell
, vol.166
, pp. 1500-1511
-
-
Singer, M.1
Wang, C.2
Cong, L.3
Marjanovic, N.D.4
Kowalczyk, M.S.5
Zhang, H.6
-
26
-
-
84893075305
-
Regulation of type i interferon responses
-
Ivashkiv, L.B. & Donlin, L.T. Regulation of type I interferon responses. Nat. Rev. Immunol. 14, 36-49 (2014).
-
(2014)
Nat. Rev. Immunol.
, vol.14
, pp. 36-49
-
-
Ivashkiv, L.B.1
Donlin, L.T.2
-
27
-
-
0034968096
-
Attrition of bystander CD8 T cells during virus-induced T-cell and interferon responses
-
McNally, J.M. et al. Attrition of bystander CD8 T cells during virus-induced T-cell and interferon responses. J. Virol. 75, 5965-5976 (2001).
-
(2001)
J. Virol.
, vol.75
, pp. 5965-5976
-
-
McNally, J.M.1
-
28
-
-
79958081170
-
Virus-induced transient immune suppression and the inhibition of T cell proliferation by type i interferon
-
Marshall, H.D., Urban, S.L. & Welsh, R.M. Virus-induced transient immune suppression and the inhibition of T cell proliferation by type I interferon. J. Virol. 85, 5929-5939 (2011).
-
(2011)
J. Virol.
, vol.85
, pp. 5929-5939
-
-
Marshall, H.D.1
Urban, S.L.2
Welsh, R.M.3
-
29
-
-
79952767536
-
IFN- directly promotes programmed cell death-1 transcription and limits the duration of T cell-mediated immunity
-
Terawaki, S. et al. IFN- directly promotes programmed cell death-1 transcription and limits the duration of T cell-mediated immunity. J. Immunol. 186, 2772-2779 (2011).
-
(2011)
J. Immunol.
, vol.186
, pp. 2772-2779
-
-
Terawaki, S.1
-
30
-
-
34547697828
-
Protein phosphatase PP6 N terminal domain restricts G1 to S phase progression in human cancer cells
-
Stefansson, B. & Brautigan, D.L. Protein phosphatase PP6 N terminal domain restricts G1 to S phase progression in human cancer cells. Cell Cycle 6, 1386-1392 (2007).
-
(2007)
Cell Cycle
, vol.6
, pp. 1386-1392
-
-
Stefansson, B.1
Brautigan, D.L.2
-
31
-
-
33845994781
-
Protein phosphatase 6 down-regulates TAK1 kinase activation in the IL-1 signaling pathway
-
Kajino, T. et al. Protein phosphatase 6 down-regulates TAK1 kinase activation in the IL-1 signaling pathway. J. Biol. Chem. 281, 39891-39896 (2006).
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 39891-39896
-
-
Kajino, T.1
-
32
-
-
84872684650
-
Identification of regulators of the innate immune response to cytosolic DNA and retroviral infection by an integrative approach
-
Lee, M.N. et al. Identification of regulators of the innate immune response to cytosolic DNA and retroviral infection by an integrative approach. Nat. Immunol. 14, 179-185 (2013).
-
(2013)
Nat. Immunol.
, vol.14
, pp. 179-185
-
-
Lee, M.N.1
-
33
-
-
32544459770
-
Restoring function in exhausted CD8 T cells during chronic viral infection
-
Barber, D.L. et al. Restoring function in exhausted CD8 T cells during chronic viral infection. Nature 439, 682-687 (2006).
-
(2006)
Nature
, vol.439
, pp. 682-687
-
-
Barber, D.L.1
-
34
-
-
84876311772
-
Persistent LCMV infection is controlled by blockade of type i interferon signaling
-
Teijaro, J.R. et al. Persistent LCMV infection is controlled by blockade of type I interferon signaling. Science 340, 207-211 (2013).
-
(2013)
Science
, vol.340
, pp. 207-211
-
-
Teijaro, J.R.1
-
35
-
-
84876299371
-
Blockade of chronic type i interferon signaling to control persistent LCMV infection
-
Wilson, E.B. et al. Blockade of chronic type I interferon signaling to control persistent LCMV infection. Science 340, 202-207 (2013).
-
(2013)
Science
, vol.340
, pp. 202-207
-
-
Wilson, E.B.1
-
36
-
-
79952755703
-
Regulatory T-cell expansion during chronic viral infection is dependent on endogenous retroviral superantigens
-
Punkosdy, G.A. et al. Regulatory T-cell expansion during chronic viral infection is dependent on endogenous retroviral superantigens. Proc. Natl. Acad. Sci. USA 108, 3677-3682 (2011).
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 3677-3682
-
-
Punkosdy, G.A.1
-
37
-
-
84906536054
-
Interplay between regulatory T cells and PD-1 in modulating T cell exhaustion and viral control during chronic LCMV infection
-
Penaloza-MacMaster, P. et al. Interplay between regulatory T cells and PD-1 in modulating T cell exhaustion and viral control during chronic LCMV infection. J. Exp. Med. 211, 1905-1918 (2014).
-
(2014)
J. Exp. Med.
, vol.211
, pp. 1905-1918
-
-
Penaloza-MacMaster, P.1
-
38
-
-
67649528173
-
Human natural Treg microRNA signature: Role of microRNA-31 and microRNA-21 in FOXP3 expression
-
Rouas, R. et al. Human natural Treg microRNA signature: role of microRNA-31 and microRNA-21 in FOXP3 expression. Eur. J. Immunol. 39, 1608-1618 (2009).
-
(2009)
Eur. J. Immunol.
, vol.39
, pp. 1608-1618
-
-
Rouas, R.1
-
39
-
-
84954193320
-
MicroRNA-31 negatively regulates peripherally derived regulatory T-cell generation by repressing retinoic acid-inducible protein 3
-
Zhang, L. et al. MicroRNA-31 negatively regulates peripherally derived regulatory T-cell generation by repressing retinoic acid-inducible protein 3. Nat. Commun. 6, 7639 (2015).
-
(2015)
Nat. Commun.
, vol.6
, pp. 7639
-
-
Zhang, L.1
-
40
-
-
84874760462
-
MiR-31 regulates interleukin 2 and kinase suppressor of ras 2 during T cell activation
-
Xue, F. et al. miR-31 regulates interleukin 2 and kinase suppressor of ras 2 during T cell activation. Genes Immun. 14, 127-131 (2013).
-
(2013)
Genes Immun.
, vol.14
, pp. 127-131
-
-
Xue, F.1
-
41
-
-
84864865406
-
Identification of microRNA-31 as a novel regulator contributing to impaired interleukin-2 production in T cells from patients with systemic lupus erythematosus
-
Fan, W. et al. Identification of microRNA-31 as a novel regulator contributing to impaired interleukin-2 production in T cells from patients with systemic lupus erythematosus. Arthritis Rheum. 64, 3715-3725 (2012).
-
(2012)
Arthritis Rheum.
, vol.64
, pp. 3715-3725
-
-
Fan, W.1
-
42
-
-
84862294199
-
Timing and magnitude of type i interferon responses by distinct sensors impact CD8 T cell exhaustion and chronic viral infection
-
Wang, Y. et al. Timing and magnitude of type I interferon responses by distinct sensors impact CD8 T cell exhaustion and chronic viral infection. Cell Host Microbe 11, 631-642 (2012).
-
(2012)
Cell Host Microbe
, vol.11
, pp. 631-642
-
-
Wang, Y.1
-
43
-
-
33646034648
-
IFN-induced attrition of CD8 T cells in the presence or absence of cognate antigen during the early stages of viral infections
-
Bahl, K. et al. IFN-induced attrition of CD8 T cells in the presence or absence of cognate antigen during the early stages of viral infections. J. Immunol. 176, 4284-4295 (2006).
-
(2006)
J. Immunol.
, vol.176
, pp. 4284-4295
-
-
Bahl, K.1
-
44
-
-
79958081170
-
Virus-induced transient immune suppression and the inhibition of T cell proliferation by type i interferon
-
Marshall, H.D., Urban, S.L. & Welsh, R.M. Virus-induced transient immune suppression and the inhibition of T cell proliferation by type I interferon. J. Virol. 85, 5929-5939 (2011).
-
(2011)
J. Virol.
, vol.85
, pp. 5929-5939
-
-
Marshall, H.D.1
Urban, S.L.2
Welsh, R.M.3
-
45
-
-
79952767536
-
IFN-directly promotes programmed cell death-1 transcription and limits the duration of T cell-mediated immunity
-
Terawaki, S. et al. IFN-directly promotes programmed cell death-1 transcription and limits the duration of T cell-mediated immunity. J. Immunol. 186, 2772-2779 (2011).
-
(2011)
J. Immunol.
, vol.186
, pp. 2772-2779
-
-
Terawaki, S.1
-
46
-
-
84874760462
-
MiR-31 regulates interleukin 2 and kinase suppressor of ras 2 during T cell activation
-
Xue, F. et al. miR-31 regulates interleukin 2 and kinase suppressor of ras 2 during T cell activation. Genes Immun. 14, 127-131 (2013).
-
(2013)
Genes Immun.
, vol.14
, pp. 127-131
-
-
Xue, F.1
-
47
-
-
84902203558
-
Type i interferon in the pathogenesis of lupus
-
Crow, M.K. Type I interferon in the pathogenesis of lupus. J. Immunol. 192, 5459-5468 (2014).
-
(2014)
J. Immunol.
, vol.192
, pp. 5459-5468
-
-
Crow, M.K.1
-
48
-
-
84864865406
-
Identification of microRNA-31 as a novel regulator contributing to impaired interleukin-2 production in T cells from patients with systemic lupus erythematosus
-
Fan, W. et al. Identification of microRNA-31 as a novel regulator contributing to impaired interleukin-2 production in T cells from patients with systemic lupus erythematosus. Arthritis Rheum. 64, 3715-3725 (2012).
-
(2012)
Arthritis Rheum.
, vol.64
, pp. 3715-3725
-
-
Fan, W.1
-
49
-
-
53449094376
-
Lymphocytic choriomeningitis virus (LCMV): Propagation, quantitation, and storage
-
15A11
-
Welsh, R.M. & Seedhom, M.O. Lymphocytic choriomeningitis virus (LCMV): propagation, quantitation, and storage. Current Protocols in Microbiology Ch 15, Unit 15A 11 (2008).
-
(2008)
Current Protocols in Microbiology Ch
, vol.15
-
-
Welsh, R.M.1
Seedhom, M.O.2
-
50
-
-
84857031449
-
An intermediate dose of LCMV clone 13 causes prolonged morbidity that is maintained by CD4+ T cells
-
Stamm, A., Valentine, L., Potts, R. & Premenko-Lanier, M. An intermediate dose of LCMV clone 13 causes prolonged morbidity that is maintained by CD4+ T cells. Virology 425, 122-132 (2012).
-
(2012)
Virology
, vol.425
, pp. 122-132
-
-
Stamm, A.1
Valentine, L.2
Potts, R.3
Premenko-Lanier, M.4
-
51
-
-
84875992924
-
Cooperativity between CD8+ T cells, non-neutralizing antibodies, and alveolar macrophages is important for heterosubtypic influenza virus immunity
-
Laidlaw, B.J. et al. Cooperativity between CD8+ T cells, non-neutralizing antibodies, and alveolar macrophages is important for heterosubtypic influenza virus immunity. PLoS Pathog. 9, e1003207 (2013).
-
(2013)
PLoS Pathog.
, vol.9
, pp. e1003207
-
-
Laidlaw, B.J.1
-
52
-
-
77954478724
-
Cell-intrinsic defects in the proliferative response of antiviral memory CD8 T cells in aged mice upon secondary infection
-
Decman, V. et al. Cell-intrinsic defects in the proliferative response of antiviral memory CD8 T cells in aged mice upon secondary infection. J. Immunol. 184, 5151-5159 (2010).
-
(2010)
J. Immunol.
, vol.184
, pp. 5151-5159
-
-
Decman, V.1
-
53
-
-
77956914605
-
Qualitatively different memory CD8+ T cells are generated after lymphocytic choriomeningitis virus and influenza virus infections
-
Mueller, S.N. et al. Qualitatively different memory CD8+ T cells are generated after lymphocytic choriomeningitis virus and influenza virus infections. J. Immunol. 185, 2182-2190 (2010).
-
(2010)
J. Immunol.
, vol.185
, pp. 2182-2190
-
-
Mueller, S.N.1
-
54
-
-
0037383592
-
Viral persistence alters CD8 T-cell immunodominance and tissue distribution and results in distinct stages of functional impairment
-
Wherry, E.J., Blattman, J.N., Murali-Krishna, K., van der Most, R. & Ahmed, R. Viral persistence alters CD8 T-cell immunodominance and tissue distribution and results in distinct stages of functional impairment. J. Virol. 77, 4911-4927 (2003).
-
(2003)
J. Virol.
, vol.77
, pp. 4911-4927
-
-
Wherry, E.J.1
Blattman, J.N.2
Murali-Krishna, K.3
Van Der Most, R.4
Ahmed, R.5
-
55
-
-
70349119901
-
In vivo enhancement of peptide display by MHC class II molecules with small molecule catalysts of peptide exchange
-
Call, M.J. et al. In vivo enhancement of peptide display by MHC class II molecules with small molecule catalysts of peptide exchange. J. Immunol. 182, 6342-6352 (2009).
-
(2009)
J. Immunol.
, vol.182
, pp. 6342-6352
-
-
Call, M.J.1
-
56
-
-
84923026945
-
The transcription factor NFAT promotes exhaustion of activated CD8+ T cells
-
Martinez, G.J. et al. The transcription factor NFAT promotes exhaustion of activated CD8+ T cells. Immunity 42, 265-278 (2015).
-
(2015)
Immunity
, vol.42
, pp. 265-278
-
-
Martinez, G.J.1
-
57
-
-
0036079158
-
The human genome browser at UCSC
-
Kent, W.J. et al. The human genome browser at UCSC. Genome Res. 12, 996-1006 (2002).
-
(2002)
Genome Res.
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
-
58
-
-
84875945705
-
ENCODE data in the UCSC Genome Browser: Year 5 update
-
Rosenbloom, K.R. et al. ENCODE data in the UCSC Genome Browser: year 5 update. Nucleic Acids Res. 41, D56-D63 (2013).
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. D56-D63
-
-
Rosenbloom, K.R.1
-
59
-
-
0033634846
-
Concerted dephosphorylation of the transcription factor NFAT1 induces a conformational switch that regulates transcriptional activity
-
Okamura, H. et al. Concerted dephosphorylation of the transcription factor NFAT1 induces a conformational switch that regulates transcriptional activity. Mol. Cell 6, 539-550 (2000).
-
(2000)
Mol. Cell
, vol.6
, pp. 539-550
-
-
Okamura, H.1
-
60
-
-
20444460289
-
MicroRNA expression profiles classify human cancers
-
Lu, J. et al. MicroRNA expression profiles classify human cancers. Nature 435, 834-838 (2005).
-
(2005)
Nature
, vol.435
, pp. 834-838
-
-
Lu, J.1
-
61
-
-
33646361583
-
GenePattern 2.0
-
Reich, M. et al. GenePattern 2.0. Nat. Genet. 38, 500-501 (2006).
-
(2006)
Nat. Genet.
, vol.38
, pp. 500-501
-
-
Reich, M.1
-
62
-
-
0035752668
-
Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array data
-
Schadt, E.E., Li, C., Ellis, B. & Wong, W.H. Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array data. J. Cell. Biochem. Suppl. 37, 120-125 (2001).
-
(2001)
J. Cell. Biochem. Suppl.
, vol.37
, pp. 120-125
-
-
Schadt, E.E.1
Li, C.2
Ellis, B.3
Wong, W.H.4
-
63
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
Tusher, V.G., Tibshirani, R. & Chu, G. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA 98, 5116-5121 (2001).
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
64
-
-
33748587841
-
A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes
-
Miranda, K.C. et al. A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes. Cell 126, 1203-1217 (2006).
-
(2006)
Cell
, vol.126
, pp. 1203-1217
-
-
Miranda, K.C.1
-
65
-
-
60149095444
-
Most mammalian mRNAs are conserved targets of microRNAs
-
Friedman, R.C., Farh, K.K., Burge, C.B. & Bartel, D.P. Most mammalian mRNAs are conserved targets of microRNAs. Genome Res. 19, 92-105 (2009).
-
(2009)
Genome Res.
, vol.19
, pp. 92-105
-
-
Friedman, R.C.1
Farh, K.K.2
Burge, C.B.3
Bartel, D.P.4
-
66
-
-
77955963884
-
Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites
-
Betel, D., Koppal, A., Agius, P., Sander, C. & Leslie, C. Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites. Genome Biol. 11, R90 (2010).
-
(2010)
Genome Biol.
, vol.11
, pp. R90
-
-
Betel, D.1
Koppal, A.2
Agius, P.3
Sander, C.4
Leslie, C.5
-
67
-
-
78651307694
-
StarBase: A database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
-
Yang, J.H. et al. starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data. Nucleic Acids Res. 39, D202-D209 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. D202-D209
-
-
Yang, J.H.1
-
68
-
-
20944450160
-
Combinatorial microRNA target predictions
-
Krek, A. et al. Combinatorial microRNA target predictions. Nat. Genet. 37, 495-500 (2005).
-
(2005)
Nat. Genet.
, vol.37
, pp. 495-500
-
-
Krek, A.1
|