메뉴 건너뛰기




Volumn 9, Issue 6, 2017, Pages

The human gut phage community and its implications for health and disease

Author keywords

Gut microbiome bacteriophages; Gut microbiome phages; Gut prophage reservoir; Healthy gut phages

Indexed keywords

BACTERIAL GROWTH; BACTERIOPHAGE; DYSBIOSIS; ECOSYSTEM RESILIENCE; GENETIC VARIABILITY; HOST PARASITE INTERACTION; HUMAN; LYSOGENIZATION; METAGENOMICS; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; NONHUMAN; REVIEW; TRANSMISSION ELECTRON MICROSCOPY; ANIMAL; BACTERIUM; GASTROINTESTINAL TRACT; GENETICS; INTESTINE FLORA; METAGENOME; MOUSE; PATHOPHYSIOLOGY; PHYSIOLOGY; PROPHAGE; VIROLOGY;

EID: 85020737732     PISSN: None     EISSN: 19994915     Source Type: Journal    
DOI: 10.3390/v9060141     Document Type: Review
Times cited : (184)

References (130)
  • 4
    • 56849106496 scopus 로고    scopus 로고
    • The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing
    • Dethlefsen, L.; Huse, S.; Sogin, M.L.; Relman, D.A. The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol. 2008, 6, e280.
    • (2008) Plos Biol , vol.6
    • Dethlefsen, L.1    Huse, S.2    Sogin, M.L.3    Relman, D.A.4
  • 5
    • 84864756231 scopus 로고    scopus 로고
    • The human microbiome: Ecosystem resilience and health
    • Relman, D.A. The human microbiome: ecosystem resilience and health. Nutr. Rev. 2012, 70, S2–S9.
    • (2012) Nutr. Rev , vol.70 , pp. S2-S9
    • Relman, D.A.1
  • 6
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • Human Microbiome Project. Structure, function and diversity of the healthy human microbiome. Nature 2012, 486, 207–214.
    • (2012) Nature , vol.486 , pp. 207-214
  • 9
    • 44649118583 scopus 로고    scopus 로고
    • Metagenomic approaches for defining the pathogenesis of inflammatory bowel diseases
    • Peterson, D.A.; Frank, D.N.; Pace, N.R.; Gordon, J.I. Metagenomic approaches for defining the pathogenesis of inflammatory bowel diseases. Cell Host Microbe 2008, 3, 417–427.
    • (2008) Cell Host Microbe , vol.3 , pp. 417-427
    • Peterson, D.A.1    Frank, D.N.2    Pace, N.R.3    Gordon, J.I.4
  • 10
    • 84858376593 scopus 로고    scopus 로고
    • The impact of the gut microbiota on human health: An integrative view
    • Clemente, J.C.; Ursell, L.K.; Parfrey, L.W.; Knight, R. The impact of the gut microbiota on human health: an integrative view. Cell 2012, 148, 1258–1270.
    • (2012) Cell , vol.148 , pp. 1258-1270
    • Clemente, J.C.1    Ursell, L.K.2    Parfrey, L.W.3    Knight, R.4
  • 12
    • 20444503665 scopus 로고    scopus 로고
    • Phage therapy: An attractive option for dealing with antibiotic‐resistant bacterial infections
    • Sulakvelidze, A. Phage therapy: an attractive option for dealing with antibiotic‐resistant bacterial infections. Drug Discov. Today 2005, 10, 807–809.
    • (2005) Drug Discov. Today , vol.10 , pp. 807-809
    • Sulakvelidze, A.1
  • 13
    • 4544321685 scopus 로고    scopus 로고
    • Phages and the evolution of bacterial pathogens: From genomic rearrangements to lysogenic conversion
    • Brussow, H.; Canchaya, C.; Hardt, W.D. Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol. Mol. Biol. Rev. 2004, 68, 560–602.
    • (2004) Microbiol. Mol. Biol. Rev , vol.68 , pp. 560-602
    • Brussow, H.1    Canchaya, C.2    Hardt, W.D.3
  • 14
    • 0036070576 scopus 로고    scopus 로고
    • Bacteriophage control of bacterial virulence
    • Wagner, P.L.; Waldor, M.K., Bacteriophage control of bacterial virulence. Infect. Immun. 2002, 70, 3985–3993.
    • (2002) Infect. Immun , vol.70 , pp. 3985-3993
    • Wagner, P.L.1    Waldor, M.K.2
  • 15
    • 0033542481 scopus 로고    scopus 로고
    • Marine viruses and their biogeochemical and ecological effects
    • Fuhrman, J. A. Marine viruses and their biogeochemical and ecological effects. Nature 1999, 399, 541–548.
    • (1999) Nature , vol.399 , pp. 541-548
    • Fuhrman, J.A.1
  • 16
    • 84865169911 scopus 로고    scopus 로고
    • Going viral: Next‐generation sequencing applied to phage populations in the human gut
    • Reyes, A.; Semenkovich, N.P.; Whiteson, K.; Rohwer, F.; Gordon, J.I., Going viral: next‐generation sequencing applied to phage populations in the human gut. Nat. Rev. Microbiol. 2012, 10, 607–617.
    • (2012) Nat. Rev. Microbiol , vol.10 , pp. 607-617
    • Reyes, A.1    Semenkovich, N.P.2    Whiteson, K.3    Rohwer, F.4    Gordon, J.I.5
  • 18
    • 84871860604 scopus 로고    scopus 로고
    • Movers and shakers: Influence of bacteriophages in shaping the mammalian gut microbiota
    • Mills, S.; Shanahan, F.; Stanton, C.; Hill, C.; Coffey, A.; Ross, R.P. Movers and shakers: influence of bacteriophages in shaping the mammalian gut microbiota. Gut Microbes 2013, 4, 4–16.
    • (2013) Gut Microbes , vol.4 , pp. 4-16
    • Mills, S.1    Shanahan, F.2    Stanton, C.3    Hill, C.4    Coffey, A.5    Ross, R.P.6
  • 19
    • 84946740229 scopus 로고    scopus 로고
    • The human gut virome: A multifaceted majority. Front
    • Ogilvie, L.A.; Jones, B.V. The human gut virome: a multifaceted majority. Front. Microbiol. 2015, 6, 918.
    • (2015) Microbiol , vol.6 , pp. 918
    • Ogilvie, L.A.1    Jones, B.V.2
  • 20
    • 84903616167 scopus 로고    scopus 로고
    • Exploiting gut bacteriophages for human health
    • Dalmasso, M.; Hill, C.; Ross, R.P. Exploiting gut bacteriophages for human health. Trends Microbiol. 2014, 22, 399–405.
    • (2014) Trends Microbiol , vol.22 , pp. 399-405
    • Dalmasso, M.1    Hill, C.2    Ross, R.P.3
  • 21
    • 77952536835 scopus 로고    scopus 로고
    • Decision making at a subcellular level determines the outcome of bacteriophage infection
    • Zeng, L.; Skinner, S.O.; Zong, C.; Sippy, J.; Feiss, M.; Golding, I. Decision making at a subcellular level determines the outcome of bacteriophage infection. Cell 2010, 141, 682–691.
    • (2010) Cell , vol.141 , pp. 682-691
    • Zeng, L.1    Skinner, S.O.2    Zong, C.3    Sippy, J.4    Feiss, M.5    Golding, I.6
  • 22
  • 23
    • 84953231449 scopus 로고    scopus 로고
    • Viral Transmission Dynamics at Single‐Cell Resolution Reveal Transiently Immune Subpopulations Caused by a Carrier State Association
    • Cenens, W.; Makumi, A.; Govers, S.K.; Lavigne, R.; Aertsen, A. Viral Transmission Dynamics at Single‐Cell Resolution Reveal Transiently Immune Subpopulations Caused by a Carrier State Association. PLoS Genet. 2015, 11, e1005770.
    • (2015) Plos Genet , vol.11
    • Cenens, W.1    Makumi, A.2    Govers, S.K.3    Lavigne, R.4    Aertsen, A.5
  • 24
    • 0022178371 scopus 로고
    • Bacteroides bacteriophages isolated from human feces
    • Kai, M.; Watanabe, S.; Furuse, K.; Ozawa, A. Bacteroides bacteriophages isolated from human feces. Microbiol. Immunol. 1985, 29, 895–899.
    • (1985) Microbiol. Immunol , vol.29 , pp. 895-899
    • Kai, M.1    Watanabe, S.2    Furuse, K.3    Ozawa, A.4
  • 25
    • 84899057953 scopus 로고    scopus 로고
    • On the interactions between virulent bacteriophages and bacteria in the gut
    • Maura, D.; Debarbieux, L. On the interactions between virulent bacteriophages and bacteria in the gut. Bacteriophage 2012, 2, 229–233.
    • (2012) Bacteriophage , vol.2 , pp. 229-233
    • Maura, D.1    Debarbieux, L.2
  • 26
    • 84994500716 scopus 로고    scopus 로고
    • Simulation of the M13 life cycle I: Assembly of a genetically‐structured deterministic chemical kinetic simulation
    • Smeal, S.W.; Schmitt, M.A.; Pereira, R.R.; Prasad, A.; Fisk, J.D. Simulation of the M13 life cycle I: Assembly of a genetically‐structured deterministic chemical kinetic simulation. Virology 2017, 500, 259–274.
    • (2017) Virology , vol.500 , pp. 259-274
    • Smeal, S.W.1    Schmitt, M.A.2    Pereira, R.R.3    Prasad, A.4    Fisk, J.D.5
  • 28
    • 84923568014 scopus 로고    scopus 로고
    • Rising to the challenge: Accelerated pace of discovery transforms marine virology
    • Brum, J.R.; Sullivan, M.B. Rising to the challenge: accelerated pace of discovery transforms marine virology. Nat. Rev. Microbiol. 2015, 13, 147–159.
    • (2015) Nat. Rev. Microbiol , vol.13 , pp. 147-159
    • Brum, J.R.1    Sullivan, M.B.2
  • 29
    • 37249025333 scopus 로고    scopus 로고
    • Coevolution with viruses drives the evolution of bacterial mutation rates
    • Pal, C.; Macia, M.D.; Oliver, A.; Schachar, I.; Buckling, A. Coevolution with viruses drives the evolution of bacterial mutation rates. Nature 2007, 450, 1079–1081.
    • (2007) Nature , vol.450 , pp. 1079-1081
    • Pal, C.1    Macia, M.D.2    Oliver, A.3    Schachar, I.4    Buckling, A.5
  • 31
    • 85015931686 scopus 로고    scopus 로고
    • Bacteria
    • Scanlan, P.D. Bacteria‐Bacteriophage Coevolution in the Human Gut: Implications for Microbial Diversity and Functionality. Trends Microbiol. 2017, doi: 10.1016/j.tim.2017.02.012.
    • (2017) Trends Microbiol
    • Scanlan, P.D.1
  • 32
    • 0007913866 scopus 로고
    • Fluctuations in the abundance of a species considered mathematically
    • Lotka, A.J. Fluctuations in the abundance of a species considered mathematically. Nature 1927, 119, 12.
    • (1927) Nature , vol.119 , pp. 12
    • Lotka, A.J.1
  • 33
    • 0006170098 scopus 로고
    • Fluctuations in the abundance of a species considered mathematically
    • Volterra, V. Fluctuations in the abundance of a species considered mathematically. Nature 1926, 118, 558–560.
    • (1926) Nature , vol.118 , pp. 558-560
    • Volterra, V.1
  • 34
    • 84872451505 scopus 로고    scopus 로고
    • Phage
    • Williams, H.T. Phage‐induced diversification improves host evolvability. BMC Evol. Biol. 2013, 13, 17.
    • (2013) BMC Evol. Biol , vol.13 , pp. 17
    • Williams, H.T.1
  • 35
    • 44849088966 scopus 로고    scopus 로고
    • Prophages in marine bacteria: Dangerous molecular time bombs or the key to survival in the seas?
    • Paul, J.H. Prophages in marine bacteria: dangerous molecular time bombs or the key to survival in the seas? ISME J 2008, 2, 579–589.
    • (2008) ISME J , vol.2 , pp. 579-589
    • Paul, J.H.1
  • 36
    • 83655191021 scopus 로고    scopus 로고
    • Marine viruses: Truth or dare
    • Breitbart, M. Marine viruses: truth or dare. Ann. Rev. Mar. Sci. 2012, 4, 425–448.
    • (2012) Ann. Rev. Mar. Sci , vol.4 , pp. 425-448
    • Breitbart, M.1
  • 37
    • 0031902076 scopus 로고    scopus 로고
    • Gene transfer by transduction in the marine environment
    • Jiang, S.C.; Paul, J.H. Gene transfer by transduction in the marine environment. Appl. Environ. Microbiol. 1998, 64, 2780–2787.
    • (1998) Appl. Environ. Microbiol , vol.64 , pp. 2780-2787
    • Jiang, S.C.1    Paul, J.H.2
  • 39
    • 84880509968 scopus 로고    scopus 로고
    • Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome
    • Modi, S.R.; Lee, H.H.; Spina, C.S.; Collins, J.J. Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome. Nature 2013, 499, 219–222.
    • (2013) Nature , vol.499 , pp. 219-222
    • Modi, S.R.1    Lee, H.H.2    Spina, C.S.3    Collins, J.J.4
  • 40
    • 84955204689 scopus 로고    scopus 로고
    • Seasonal time bombs: Dominant temperate viruses affect Southern Ocean microbial dynamics
    • Brum, J.R.; Hurwitz, B.L.; Schofield, O.; Ducklow, H.W.; Sullivan, M.B. Seasonal time bombs: dominant temperate viruses affect Southern Ocean microbial dynamics. ISME J. 2016, 10, 437–449.
    • (2016) ISME J , vol.10 , pp. 437-449
    • Brum, J.R.1    Hurwitz, B.L.2    Schofield, O.3    Ducklow, H.W.4    Sullivan, M.B.5
  • 42
    • 84929676980 scopus 로고    scopus 로고
    • The virome in host health and disease
    • Cadwell, K. The virome in host health and disease. Immunity 2015, 42, 805–813.
    • (2015) Immunity , vol.42 , pp. 805-813
    • Cadwell, K.1
  • 43
    • 84921690179 scopus 로고    scopus 로고
    • Expanding the role of the virome: Commensalism in the gut
    • Cadwell, K. Expanding the role of the virome: commensalism in the gut. J. Virol. 2015, 89, 1951–1953.
    • (2015) J. Virol , vol.89 , pp. 1951-1953
    • Cadwell, K.1
  • 44
    • 84857371051 scopus 로고    scopus 로고
    • Metagenomics and future perspectives in virus discovery
    • Mokili, J.L.; Rohwer, F.; Dutilh, B.E. Metagenomics and future perspectives in virus discovery. Curr. Opin. Virol. 2012, 2, 63–77.
    • (2012) Curr. Opin. Virol , vol.2 , pp. 63-77
    • Mokili, J.L.1    Rohwer, F.2    Dutilh, B.E.3
  • 47
    • 84879373236 scopus 로고    scopus 로고
    • Resident viruses and their interactions with the immune system
    • Duerkop, B.A.; Hooper, L.V. Resident viruses and their interactions with the immune system. Nat. Immunol. 2013, 14, 654–659.
    • (2013) Nat. Immunol , vol.14 , pp. 654-659
    • Duerkop, B.A.1    Hooper, L.V.2
  • 49
    • 84948992933 scopus 로고    scopus 로고
    • Gut microbiota and aging
    • O’Toole, P.W.; Jeffery, I.B. Gut microbiota and aging. Science 2015, 350, 1214–1215.
    • (2015) Science , vol.350 , pp. 1214-1215
    • O’Toole, P.W.1    Jeffery, I.B.2
  • 54
    • 84871956840 scopus 로고    scopus 로고
    • Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization
    • Sharon, I.; Morowitz, M.J.; Thomas, B.C.; Costello, E.K.; Relman, D.A.; Banfield, J.F. Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization. Genome. Res. 2013, 23, 111–120.
    • (2013) Genome. Res , vol.23 , pp. 111-120
    • Sharon, I.1    Morowitz, M.J.2    Thomas, B.C.3    Costello, E.K.4    Relman, D.A.5    Banfield, J.F.6
  • 56
  • 59
    • 84869214358 scopus 로고    scopus 로고
    • Virulent bacteriophages can target O104:H4 enteroaggregative Escherichia coli in the mouse intestine. Antimicrob
    • Maura, D.; Galtier, M.; Le Bouguenec, C.; Debarbieux, L. Virulent bacteriophages can target O104:H4 enteroaggregative Escherichia coli in the mouse intestine. Antimicrob. Agents Chemother. 2012, 56, 6235–6242.
    • (2012) Agents Chemother , vol.56 , pp. 6235-6242
    • Maura, D.1    Galtier, M.2    Le Bouguenec, C.3    Debarbieux, L.4
  • 60
    • 0020512991 scopus 로고
    • Bacteriophage distribution in human faeces: Continuous survey of healthy subjects and patients with internal and leukaemic diseases
    • Furuse, K.; Osawa, S.; Kawashiro, J.; Tanaka, R.; Ozawa, A.; Sawamura, S.; Yanagawa, Y.; Nagao, T.; Watanabe, I. Bacteriophage distribution in human faeces: continuous survey of healthy subjects and patients with internal and leukaemic diseases. J. Gen. Virol. 1983, 64, 2039–2043.
    • (1983) J. Gen. Virol , vol.64 , pp. 2039-2043
    • Furuse, K.1    Osawa, S.2    Kawashiro, J.3    Tanaka, R.4    Ozawa, A.5    Sawamura, S.6    Yanagawa, Y.7    Nagao, T.8    Watanabe, I.9
  • 67
    • 0022602470 scopus 로고
    • Bacteriophages and indicator bacteria in human and animal faeces
    • Havelaar, A.H.; Furuse, K.; Hogeboom, W.M. Bacteriophages and indicator bacteria in human and animal faeces. J. Appl. Bacteriol. 1986, 60, 255–262.
    • (1986) J. Appl. Bacteriol , vol.60 , pp. 255-262
    • Havelaar, A.H.1    Furuse, K.2    Hogeboom, W.M.3
  • 68
    • 84942198154 scopus 로고    scopus 로고
    • Viral assemblage composition in Yellowstone acidic hot springs assessed by network analysis
    • Bolduc, B.; Wirth, J.F.; Mazurie, A.; Young, M.J. Viral assemblage composition in Yellowstone acidic hot springs assessed by network analysis. ISME J. 2015, 9, 2162–2177.
    • (2015) ISME J , vol.9 , pp. 2162-2177
    • Bolduc, B.1    Wirth, J.F.2    Mazurie, A.3    Young, M.J.4
  • 69
    • 40849126681 scopus 로고    scopus 로고
    • Reticulate representation of evolutionary and functional relationships between phage genomes
    • Lima-Mendez, G.; Van Helden, J.; Toussaint, A.; Leplae, R. Reticulate representation of evolutionary and functional relationships between phage genomes. Mol. Biol. Evol. 2008, 25, 762–777.
    • (2008) Mol. Biol. Evol , vol.25 , pp. 762-777
    • Lima-Mendez, G.1    Van Helden, J.2    Toussaint, A.3    Leplae, R.4
  • 70
    • 84930658013 scopus 로고    scopus 로고
    • VirSorter: Mining viral signal from microbial genomic data
    • Roux, S.; Enault, F.; Hurwitz, B.L.; Sullivan, M.B. VirSorter: mining viral signal from microbial genomic data. PeerJ. 2015, 3, e985.
    • (2015) Peerj , vol.3
    • Roux, S.1    Enault, F.2    Hurwitz, B.L.3    Sullivan, M.B.4
  • 71
    • 84939526110 scopus 로고    scopus 로고
    • Viral dark matter and virus‐host interactions resolved from publicly available microbial genomes
    • Roux, S.; Hallam, S.J.; Woyke, T.; Sullivan, M.B. Viral dark matter and virus‐host interactions resolved from publicly available microbial genomes. Elife 2015, 4, e08490.
    • (2015) Elife , vol.4
    • Roux, S.1    Hallam, S.J.2    Woyke, T.3    Sullivan, M.B.4
  • 75
    • 84899552918 scopus 로고    scopus 로고
    • Metavir 2: New tools for viral metagenome comparison and assembled virome analysis
    • Roux, S.; Tournayre, J.; Mahul, A.; Debroas, D.; Enault, F, Metavir 2: new tools for viral metagenome comparison and assembled virome analysis. BMC Bioinformatics 2014, 15, 76.
    • (2014) BMC Bioinformatics , vol.15 , pp. 76
    • Roux, S.1    Tournayre, J.2    Mahul, A.3    Debroas, D.4    Enault, F.5
  • 79
    • 83055177100 scopus 로고    scopus 로고
    • Diversity and abundance of single
    • Kim, M.S.; Park, E.J.; Roh, S.W.; Bae, J.W. Diversity and abundance of single‐stranded DNA viruses in human feces. Appl. Environ. Microbiol. 2011, 77, 8062–8070.
    • (2011) Appl. Environ. Microbiol , vol.77 , pp. 8062-8070
    • Kim, M.S.1    Park, E.J.2    Roh, S.W.3    Bae, J.W.4
  • 80
    • 84863838397 scopus 로고    scopus 로고
    • Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads
    • Roux, S.; Krupovic, M.; Poulet, A.; Debroas, D.; Enault, F. Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads. PLoS One 2012, 7, e40418.
    • (2012) Plos One , vol.7
    • Roux, S.1    Krupovic, M.2    Poulet, A.3    Debroas, D.4    Enault, F.5
  • 81
    • 79955894106 scopus 로고    scopus 로고
    • Microviridae goes temperate: Microvirus‐related proviruses reside in the genomes of Bacteroidetes
    • Krupovic, M.; Forterre, P. Microviridae goes temperate: microvirus‐related proviruses reside in the genomes of Bacteroidetes. PLoS One 2011, 6, e19893.
    • (2011) Plos One , vol.6
    • Krupovic, M.1    Forterre, P.2
  • 85
    • 84865169354 scopus 로고    scopus 로고
    • CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome
    • Stern, A.; Mick, E.; Tirosh, I.; Sagy, O.; Sorek, R. CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome. Genome Research 2012, 22, 1985–1994.
    • (2012) Genome Research , vol.22 , pp. 1985-1994
    • Stern, A.1    Mick, E.2    Tirosh, I.3    Sagy, O.4    Sorek, R.5
  • 86
    • 84883192222 scopus 로고    scopus 로고
    • Association between living environment and human oral viral ecology
    • Robles-Sikisaka, R.; Ly, M.; Boehm, T.; Naidu, M.; Salzman, J.; Pride, D.T. Association between living environment and human oral viral ecology. ISME J. 2013, 7, 1710–1724.
    • (2013) ISME J , vol.7 , pp. 1710-1724
    • Robles-Sikisaka, R.1    Ly, M.2    Boehm, T.3    Naidu, M.4    Salzman, J.5    Pride, D.T.6
  • 88
    • 39649093188 scopus 로고    scopus 로고
    • Dysbiosis in inflammatory bowel disease: A role for bacteriophages?
    • Lepage, P.; Colombet, J.; Marteau, P.; Sime-Ngando, T.; Dore, J.; Leclerc, M. Dysbiosis in inflammatory bowel disease: a role for bacteriophages? Gut 2008, 57, 424–425.
    • (2008) Gut , vol.57 , pp. 424-425
    • Lepage, P.1    Colombet, J.2    Marteau, P.3    Sime-Ngando, T.4    Dore, J.5    Leclerc, M.6
  • 89
    • 84958068920 scopus 로고    scopus 로고
    • Spatial disturbances in altered mucosal and luminal gut viromes of diet
    • Kim, M.S.; Bae, J.W. Spatial disturbances in altered mucosal and luminal gut viromes of diet‐induced obese mice. Environ. Microbiol. 2016, 18, 1498–1510.
    • (2016) Environ. Microbiol , vol.18 , pp. 1498-1510
    • Kim, M.S.1    Bae, J.W.2
  • 90
    • 85020751893 scopus 로고    scopus 로고
    • Piggy‐back‐the‐Winner in host‐associated microbial communities
    • Silveira, C.B; Rowler, F.L. Piggy‐back‐the‐Winner in host‐associated microbial communities. Biofilms and Microbiomes 2016, 18, 1498–1510.
    • (2016) Biofilms and Microbiomes , vol.18 , pp. 1498-1510
    • Silveira, C.B.1    Rowler, F.L.2
  • 93
    • 85018297391 scopus 로고    scopus 로고
    • Menage a trois in the human gut: Interactions between host, bacteria and phages
    • Mirzaei, M.K.; Maurice, C.F. Menage a trois in the human gut: interactions between host, bacteria and phages. Nat. Rev. Microbiol. 2017. doi:10.1038/nrmicro.2017.30.
    • (2017) Nat. Rev. Microbiol
    • Mirzaei, M.K.1    Maurice, C.F.2
  • 95
    • 84908456823 scopus 로고    scopus 로고
    • Conditional tolerance of temperate phages via transcription‐dependent CRISPR‐Cas targeting
    • Goldberg, G.W.; Jiang, W.; Bikard, D.; Marraffini, L.A. Conditional tolerance of temperate phages via transcription‐dependent CRISPR‐Cas targeting. Nature 2014, 514, 633–637.
    • (2014) Nature , vol.514 , pp. 633-637
    • Goldberg, G.W.1    Jiang, W.2    Bikard, D.3    Marraffini, L.A.4
  • 97
    • 84879007876 scopus 로고    scopus 로고
    • Holding a grudge: Persisting anti‐phage CRISPR immunity in multiple human gut microbiomes
    • Mick, E.; Stern, A.; Sorek, R., Holding a grudge: persisting anti‐phage CRISPR immunity in multiple human gut microbiomes. RNA Biol. 2013, 10, 900–906.
    • (2013) RNA Biol , vol.10 , pp. 900-906
    • Mick, E.1    Stern, A.2    Sorek, R.3
  • 98
    • 78649342032 scopus 로고    scopus 로고
    • The Escherichia coli CRISPR system protects from lambda lysogenization, lysogens, and prophage induction
    • Edgar, R.; Qimron, U. The Escherichia coli CRISPR system protects from lambda lysogenization, lysogens, and prophage induction. J. Bacteriol. 2010, 192, 6291–6294.
    • (2010) J. Bacteriol , vol.192 , pp. 6291-6294
    • Edgar, R.1    Qimron, U.2
  • 99
    • 84872607723 scopus 로고    scopus 로고
    • Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system
    • Bondy-Denomy, J.; Pawluk, A.; Maxwell, K.L.; Davidson, A.R. Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system. Nature 2013, 493, 429–432.
    • (2013) Nature , vol.493 , pp. 429-432
    • Bondy-Denomy, J.1    Pawluk, A.2    Maxwell, K.L.3    Davidson, A.R.4
  • 101
    • 84890281518 scopus 로고    scopus 로고
    • Gnotobiotic mouse model of phage‐bacterial host dynamics in the human gut
    • Reyes, A.; Wu, M.; McNulty, N.P.; Rohwer, F.L.; Gordon, J.I. Gnotobiotic mouse model of phage‐bacterial host dynamics in the human gut. Proc. Natl. Acad. Sci. USA 2013, 110, 20236–20241.
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 20236-20241
    • Reyes, A.1    Wu, M.2    McNulty, N.P.3    Rohwer, F.L.4    Gordon, J.I.5
  • 102
    • 84859418457 scopus 로고    scopus 로고
    • Intestinal colonization by enteroaggregative Escherichia coli supports long‐term bacteriophage replication in mice
    • Maura, D.; Morello, E.; du Merle, L.; Bomme, P.; Le Bouguenec, C.; Debarbieux, L. Intestinal colonization by enteroaggregative Escherichia coli supports long‐term bacteriophage replication in mice. Environ. Microbiol. 2012, 14, 1844–1854.
    • (2012) Environ. Microbiol , vol.14 , pp. 1844-1854
    • Maura, D.1    Morello, E.2    Du Merle, L.3    Bomme, P.4    Le Bouguenec, C.5    Debarbieux, L.6
  • 105
    • 84953273098 scopus 로고    scopus 로고
    • Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut‐on‐a‐chip
    • Kim, H.J.; Li, H.; Collins, J.J.; Ingber, D.E. Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut‐on‐a‐chip. Proc. Natl. Acad. Sci. USA 2016, 113, E7–E15.
    • (2016) Proc. Natl. Acad. Sci. USA , vol.113 , pp. EE7-E15
    • Kim, H.J.1    Li, H.2    Collins, J.J.3    Ingber, D.E.4
  • 107
    • 84963785503 scopus 로고    scopus 로고
    • Computational approaches to predict bacteriophage‐host relationships
    • Edwards, R.A.; McNair, K.; Faust, K.; Raes, J.; Dutilh, B.E. Computational approaches to predict bacteriophage‐host relationships. FEMS Microbiol. Rev. 2016, 40, 258–272.
    • (2016) FEMS Microbiol. Rev , vol.40 , pp. 258-272
    • Edwards, R.A.1    McNair, K.2    Faust, K.3    Raes, J.4    Dutilh, B.E.5
  • 108
    • 85020779896 scopus 로고    scopus 로고
    • Scaffolding bacterial genomes and probing host
    • Marbouty, M.; Baudry, L.; Cournac, A.; Koszul, R. Scaffolding bacterial genomes and probing host‐virus interactions in gut microbiome by proximity ligation (chromosome capture) assay. Sci. Adv. 2017, 3, e1602105.
    • (2017) Sci. Adv , vol.3
    • Marbouty, M.1    Baudry, L.2    Cournac, A.3    Koszul, R.4
  • 109
    • 0035174582 scopus 로고    scopus 로고
    • Comparative study of vaginal Lactobacillus phages isolated from women in the United States and Turkey: Prevalence, morphology, host range, and DNA homology
    • Kilic, A.O.; Pavlova, S.I.; Alpay, S.; Kilic, S.S.; Tao, L. Comparative study of vaginal Lactobacillus phages isolated from women in the United States and Turkey: prevalence, morphology, host range, and DNA homology. Clin. Diagn. Lab. Immunol. 2001, 8, 31–39.
    • (2001) Clin. Diagn. Lab. Immunol , vol.8 , pp. 31-39
    • Kilic, A.O.1    Pavlova, S.I.2    Alpay, S.3    Kilic, S.S.4    Tao, L.5
  • 111
    • 84957990262 scopus 로고    scopus 로고
    • Antibiotics and the Human Gut Microbiome: Dysbioses and Accumulation of Resistances
    • Francino, M.P. Antibiotics and the Human Gut Microbiome: Dysbioses and Accumulation of Resistances. Front. Microbiol. 2015, 6, 1543.
    • (2015) Front. Microbiol , vol.6 , pp. 1543
    • Francino, M.P.1
  • 112
    • 84943258596 scopus 로고    scopus 로고
    • Effects of Long Term Antibiotic Therapy on Human Oral and Fecal Viromes
    • Abeles, S.R.; Ly, M.; Santiago-Rodriguez, T.M.; Pride, D.T. Effects of Long Term Antibiotic Therapy on Human Oral and Fecal Viromes. PLoS One 2015, 10, e0134941.
    • (2015) Plos One , vol.10
    • Abeles, S.R.1    Ly, M.2    Santiago-Rodriguez, T.M.3    Pride, D.T.4
  • 113
    • 84883788802 scopus 로고    scopus 로고
    • Microbiota’s ‘little helpers’: Bacteriophages and antibiotic‐associated responses in the gut microbiome
    • Sun, C.L.; Relman, D.A. Microbiota’s ‘little helpers’: bacteriophages and antibiotic‐associated responses in the gut microbiome. Genome Biol. 2013, 14, 127.
    • (2013) Genome Biol , vol.14 , pp. 127
    • Sun, C.L.1    Relman, D.A.2
  • 114
    • 84982822142 scopus 로고    scopus 로고
    • Fecal Transplants: What Is Being Transferred?
    • Bojanova, D.P.; Bordenstein, S.R. Fecal Transplants: What Is Being Transferred? PLoS Biol. 2016, 14, e1002503.
    • (2016) Plos Biol , vol.14
    • Bojanova, D.P.1    Bordenstein, S.R.2
  • 115
    • 85008164834 scopus 로고    scopus 로고
    • An evaluation of the therapeutic potential of fecal microbiota transplantation to treat infectious and metabolic diseases
    • Groen, A.K.; Nieuwdorp, M. An evaluation of the therapeutic potential of fecal microbiota transplantation to treat infectious and metabolic diseases. EMBO Mol. Med. 2017, 9, 1–3.
    • (2017) EMBO Mol. Med , vol.9 , pp. 1-3
    • Groen, A.K.1    Nieuwdorp, M.2
  • 118
    • 85020751607 scopus 로고    scopus 로고
    • Fecal microbiota transplantation to fight Clostridium difficile infections and other intestinal diseases
    • Moelling, K.; Broecker, F. Fecal microbiota transplantation to fight Clostridium difficile infections and other intestinal diseases. Bacteriophage 2016, 6, e1251380.
    • (2016) Bacteriophage , vol.6
    • Moelling, K.1    Broecker, F.2
  • 120
    • 0027452419 scopus 로고
    • Putting back the bugs”: Bacterial treatment relieves chronic constipation and symptoms of irritable bowel syndrome
    • Andrews, P.J.; Borody, T.J. “Putting back the bugs”: bacterial treatment relieves chronic constipation and symptoms of irritable bowel syndrome. Med. J. Aust. 1993, 159, 633–634.
    • (1993) Med. J. Aust. , vol.159 , pp. 633-634
    • Andrews, P.J.1    Borody, T.J.2
  • 123
    • 84978923047 scopus 로고    scopus 로고
    • Long
    • Broecker, F.; Klumpp, J.; Moelling, K. Long‐term microbiota and virome in a Zurich patient after fecal transplantation against Clostridium difficile infection. Ann. N. Y. Acad. Sci. 2016, 1372, 29–41.
    • (2016) Ann. N. Y. Acad. Sci , vol.1372 , pp. 29-41
    • Broecker, F.1    Klumpp, J.2    Moelling, K.3
  • 129
    • 84936972447 scopus 로고    scopus 로고
    • The evolution of bacterial resistance against bacteriophages in the horse chestnut phyllosphere is general across both space and time
    • Koskella, B.; Parr, N. The evolution of bacterial resistance against bacteriophages in the horse chestnut phyllosphere is general across both space and time. Philos. Trans. R. Soc. Lond. B. 2015, 370. doi:10.1098/rstb.2014.0297.
    • (2015) Philos. Trans. R. Soc. Lond. B , pp. 370
    • Koskella, B.1    Parr, N.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.