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Volumn 18, Issue 5, 2016, Pages 1498-1510

Spatial disturbances in altered mucosal and luminal gut viromes of diet-induced obese mice

Author keywords

[No Author keywords available]

Indexed keywords

ADVERSE EFFECTS; ANIMAL; BACTEROIDETES; CLASSIFICATION; GENETICS; INTESTINE FLORA; INTESTINE MUCOSA; LIPID DIET; MICROBIOLOGY; MICROFLORA; MOUSE; MOUSE MUTANT; OBESITY; VIROLOGY; VIRUS;

EID: 84958068920     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/1462-2920.13182     Document Type: Article
Times cited : (63)

References (71)
  • 1
    • 84908306828 scopus 로고    scopus 로고
    • Correlation between intraluminal oxygen gradient and radial partitioning of intestinal microbiota
    • e1058
    • Albenberg, L., Esipova, T.V., Judge, C.P., Bittinger, K., Chen, J., Laughlin, A., etal. (2014) Correlation between intraluminal oxygen gradient and radial partitioning of intestinal microbiota. Gastroenterology 147: 1055-1063 e1058.
    • (2014) Gastroenterology , vol.147 , pp. 1055-1063
    • Albenberg, L.1    Esipova, T.V.2    Judge, C.P.3    Bittinger, K.4    Chen, J.5    Laughlin, A.6
  • 3
    • 84897138296 scopus 로고    scopus 로고
    • Role of the microbiota in immunity and inflammation
    • Belkaid, Y., and Hand, T.W. (2014) Role of the microbiota in immunity and inflammation. Cell 157: 121-141.
    • (2014) Cell , vol.157 , pp. 121-141
    • Belkaid, Y.1    Hand, T.W.2
  • 4
    • 84905049901 scopus 로고    scopus 로고
    • Trimmomatic: a flexible trimmer for Illumina sequence data
    • Bolger, A.M., Lohse, M., and Usadel, B. (2014) Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30: 2114-2120.
    • (2014) Bioinformatics , vol.30 , pp. 2114-2120
    • Bolger, A.M.1    Lohse, M.2    Usadel, B.3
  • 5
    • 0035153828 scopus 로고    scopus 로고
    • Comparative phage genomics and the evolution of Siphoviridae: insights from dairy phages
    • Brussow, H., and Desiere, F. (2001) Comparative phage genomics and the evolution of Siphoviridae: insights from dairy phages. Mol Microbiol 39: 213-222.
    • (2001) Mol Microbiol , vol.39 , pp. 213-222
    • Brussow, H.1    Desiere, F.2
  • 6
    • 48249125862 scopus 로고    scopus 로고
    • Changes in gut microbiota control metabolic endotoxemia-induced inflammation in high-fat diet-induced obesity and diabetes in mice
    • Cani, P.D., Bibiloni, R., Knauf, C., Waget, A., Neyrinck, A.M., Delzenne, N.M., and Burcelin, R. (2008) Changes in gut microbiota control metabolic endotoxemia-induced inflammation in high-fat diet-induced obesity and diabetes in mice. Diabetes 57: 1470-1481.
    • (2008) Diabetes , vol.57 , pp. 1470-1481
    • Cani, P.D.1    Bibiloni, R.2    Knauf, C.3    Waget, A.4    Neyrinck, A.M.5    Delzenne, N.M.6    Burcelin, R.7
  • 8
    • 84866015194 scopus 로고    scopus 로고
    • Fecal lipocalin 2, a sensitive and broadly dynamic non-invasive biomarker for intestinal inflammation
    • Chassaing, B., Srinivasan, G., Delgado, M.A., Young, A.N., Gewirtz, A.T., and Vijay-Kumar, M. (2012) Fecal lipocalin 2, a sensitive and broadly dynamic non-invasive biomarker for intestinal inflammation. PLoS ONE 7: e44328.
    • (2012) PLoS ONE , vol.7
    • Chassaing, B.1    Srinivasan, G.2    Delgado, M.A.3    Young, A.N.4    Gewirtz, A.T.5    Vijay-Kumar, M.6
  • 9
    • 84924301510 scopus 로고    scopus 로고
    • Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome
    • Chassaing, B., Koren, O., Goodrich, J.K., Poole, A.C., Srinivasan, S., Ley, R.E., and Gewirtz, A.T. (2015) Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome. Nature 519: 92-96.
    • (2015) Nature , vol.519 , pp. 92-96
    • Chassaing, B.1    Koren, O.2    Goodrich, J.K.3    Poole, A.C.4    Srinivasan, S.5    Ley, R.E.6    Gewirtz, A.T.7
  • 10
    • 72949091232 scopus 로고    scopus 로고
    • Bacterial community variation in human body habitats across space and time
    • Costello, E.K., Lauber, C.L., Hamady, M., Fierer, N., Gordon, J.I., and Knight, R. (2009) Bacterial community variation in human body habitats across space and time. Science 326: 1694-1697.
    • (2009) Science , vol.326 , pp. 1694-1697
    • Costello, E.K.1    Lauber, C.L.2    Hamady, M.3    Fierer, N.4    Gordon, J.I.5    Knight, R.6
  • 11
    • 84907563983 scopus 로고    scopus 로고
    • Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences
    • Cox, L.M., Yamanishi, S., Sohn, J., Alekseyenko, A.V., Leung, J.M., Cho, I., etal. (2014) Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences. Cell 158: 705-721.
    • (2014) Cell , vol.158 , pp. 705-721
    • Cox, L.M.1    Yamanishi, S.2    Sohn, J.3    Alekseyenko, A.V.4    Leung, J.M.5    Cho, I.6
  • 12
    • 84903978009 scopus 로고    scopus 로고
    • Evidence of extensive DNA transfer between bacteroidales species within the human gut
    • Coyne, M.J., Zitomersky, N.L., McGuire, A.M., Earl, A.M., and Comstock, L.E. (2014) Evidence of extensive DNA transfer between bacteroidales species within the human gut. MBio 5: e1305-e1314.
    • (2014) MBio , vol.5 , pp. e1305-e1314
    • Coyne, M.J.1    Zitomersky, N.L.2    McGuire, A.M.3    Earl, A.M.4    Comstock, L.E.5
  • 14
    • 85014083140 scopus 로고    scopus 로고
    • Gut microbial succession follows acute secretory diarrhea in humans
    • David, L.A., Weil, A., Ryan, E.T., Calderwood, S.B., Harris, J.B., Chowdhury, F., etal. (2015) Gut microbial succession follows acute secretory diarrhea in humans. MBio 6: e00381-15.
    • (2015) MBio , vol.6 , pp. e00315-e00381
    • David, L.A.1    Weil, A.2    Ryan, E.T.3    Calderwood, S.B.4    Harris, J.B.5    Chowdhury, F.6
  • 15
    • 68249110221 scopus 로고    scopus 로고
    • The role of pH in determining the species composition of the human colonic microbiota
    • Duncan, S.H., Louis, P., Thomson, J.M., and Flint, H.J. (2009) The role of pH in determining the species composition of the human colonic microbiota. Environ Microbiol 11: 2112-2122.
    • (2009) Environ Microbiol , vol.11 , pp. 2112-2122
    • Duncan, S.H.1    Louis, P.2    Thomson, J.M.3    Flint, H.J.4
  • 16
    • 84905041075 scopus 로고    scopus 로고
    • A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
    • Dutilh, B.E., Cassman, N., McNair, K., Sanchez, S.E., Silva, G.G., Boling, L., etal. (2014) A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes. Nat Commun 5: 4498.
    • (2014) Nat Commun , vol.5 , pp. 4498
    • Dutilh, B.E.1    Cassman, N.2    McNair, K.3    Sanchez, S.E.4    Silva, G.G.5    Boling, L.6
  • 17
    • 78149317654 scopus 로고    scopus 로고
    • The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea
    • Endt, K., Stecher, B., Chaffron, S., Slack, E., Tchitchek, N., Benecke, A., etal. (2010) The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea. PLoS Pathog 6: e1001097.
    • (2010) PLoS Pathog , vol.6
    • Endt, K.1    Stecher, B.2    Chaffron, S.3    Slack, E.4    Tchitchek, N.5    Benecke, A.6
  • 19
    • 0032566919 scopus 로고    scopus 로고
    • A short noncoding viral DNA element showing characteristics of a replication origin confers bacteriophage resistance to Streptococcus thermophilus
    • Foley, S., Lucchini, S., Zwahlen, M.C., and Brussow, H. (1998) A short noncoding viral DNA element showing characteristics of a replication origin confers bacteriophage resistance to Streptococcus thermophilus. Virology 250: 377-387.
    • (1998) Virology , vol.250 , pp. 377-387
    • Foley, S.1    Lucchini, S.2    Zwahlen, M.C.3    Brussow, H.4
  • 20
    • 84875838012 scopus 로고    scopus 로고
    • Trends in energy intake among adults in the United States: findings from NHANES
    • Ford, E.S., and Dietz, W.H. (2013) Trends in energy intake among adults in the United States: findings from NHANES. Am J Clin Nutr 97: 848-853.
    • (2013) Am J Clin Nutr , vol.97 , pp. 848-853
    • Ford, E.S.1    Dietz, W.H.2
  • 22
    • 85014843778 scopus 로고    scopus 로고
    • Linear growth faltering in infants is associated with Acidaminococcus sp. and community-level changes in the gut microbiota
    • Gough, E.K., Stephens, D.A., Moodie, E.E., Prendergast, A.J., Stoltzfus, R.J., Humphrey, J.H., and Manges, A.R. (2015) Linear growth faltering in infants is associated with Acidaminococcus sp. and community-level changes in the gut microbiota. Microbiome 3: 24.
    • (2015) Microbiome , vol.3 , pp. 24
    • Gough, E.K.1    Stephens, D.A.2    Moodie, E.E.3    Prendergast, A.J.4    Stoltzfus, R.J.5    Humphrey, J.H.6    Manges, A.R.7
  • 23
    • 0001886818 scopus 로고
    • Generalized Procrustes analysis
    • Gower, J.C. (1975) Generalized Procrustes analysis. Psychometrika 40: 33-50.
    • (1975) Psychometrika , vol.40 , pp. 33-50
    • Gower, J.C.1
  • 24
    • 84924256492 scopus 로고    scopus 로고
    • Gut microbiota. Microbiota organization - a key to understanding CRC development
    • Hold, G.L., and Garrett, W.S. (2015) Gut microbiota. Microbiota organization - a key to understanding CRC development. Nat Rev Gastroenterol Hepatol 12: 128-129.
    • (2015) Nat Rev Gastroenterol Hepatol , vol.12 , pp. 128-129
    • Hold, G.L.1    Garrett, W.S.2
  • 25
  • 26
    • 84867658789 scopus 로고    scopus 로고
    • Intestinal commensal microbes as immune modulators
    • Ivanov, I.I., and Honda, K. (2012) Intestinal commensal microbes as immune modulators. Cell Host Microbe 12: 496-508.
    • (2012) Cell Host Microbe , vol.12 , pp. 496-508
    • Ivanov, I.I.1    Honda, K.2
  • 28
    • 84891736162 scopus 로고    scopus 로고
    • Bacteria penetrate the normally impenetrable inner colon mucus layer in both murine colitis models and patients with ulcerative colitis
    • Johansson, M.E., Gustafsson, J.K., Holmen-Larsson, J., Jabbar, K.S., Xia, L., Xu, H., etal. (2014) Bacteria penetrate the normally impenetrable inner colon mucus layer in both murine colitis models and patients with ulcerative colitis. Gut 63: 281-291.
    • (2014) Gut , vol.63 , pp. 281-291
    • Johansson, M.E.1    Gustafsson, J.K.2    Holmen-Larsson, J.3    Jabbar, K.S.4    Xia, L.5    Xu, H.6
  • 29
    • 84885711264 scopus 로고    scopus 로고
    • Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota
    • Kashyap, P.C., Marcobal, A., Ursell, L.K., Smits, S.A., Sonnenburg, E.D., Costello, E.K., etal. (2013) Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. Proc Natl Acad Sci USA 110: 17059-17064.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 17059-17064
    • Kashyap, P.C.1    Marcobal, A.2    Ursell, L.K.3    Smits, S.A.4    Sonnenburg, E.D.5    Costello, E.K.6
  • 30
    • 79959201412 scopus 로고    scopus 로고
    • Human nutrition, the gut microbiome and the immune system
    • Kau, A.L., Ahern, P.P., Griffin, N.W., Goodman, A.L., and Gordon, J.I. (2011) Human nutrition, the gut microbiome and the immune system. Nature 474: 327-336.
    • (2011) Nature , vol.474 , pp. 327-336
    • Kau, A.L.1    Ahern, P.P.2    Griffin, N.W.3    Goodman, A.L.4    Gordon, J.I.5
  • 31
    • 83055177100 scopus 로고    scopus 로고
    • Diversity and abundance of single-stranded DNA viruses in human feces
    • Kim, M.S., Park, E.J., Roh, S.W., and Bae, J.W. (2011) Diversity and abundance of single-stranded DNA viruses in human feces. Appl Environ Microbiol 77: 8062-8070.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 8062-8070
    • Kim, M.S.1    Park, E.J.2    Roh, S.W.3    Bae, J.W.4
  • 32
    • 84884943201 scopus 로고    scopus 로고
    • Strict vegetarian diet improves the risk factors associated with metabolic diseases by modulating gut microbiota and reducing intestinal inflammation
    • Kim, M.S., Hwang, S.S., Park, E.J., and Bae, J.W. (2013) Strict vegetarian diet improves the risk factors associated with metabolic diseases by modulating gut microbiota and reducing intestinal inflammation. Environ Microbiol Rep 5: 765-775.
    • (2013) Environ Microbiol Rep , vol.5 , pp. 765-775
    • Kim, M.S.1    Hwang, S.S.2    Park, E.J.3    Bae, J.W.4
  • 33
    • 84888367816 scopus 로고    scopus 로고
    • Gene product 0.4 increases bacteriophage T7 competitiveness by inhibiting host cell division
    • Kiro, R., Molshanski-Mor, S., Yosef, I., Milam, S.L., Erickson, H.P., and Qimron, U. (2013) Gene product 0.4 increases bacteriophage T7 competitiveness by inhibiting host cell division. Proc Natl Acad Sci USA 110: 19549-19554.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 19549-19554
    • Kiro, R.1    Molshanski-Mor, S.2    Yosef, I.3    Milam, S.L.4    Erickson, H.P.5    Qimron, U.6
  • 34
    • 84859925158 scopus 로고    scopus 로고
    • How glycan metabolism shapes the human gut microbiota
    • Koropatkin, N.M., Cameron, E.A., and Martens, E.C. (2012) How glycan metabolism shapes the human gut microbiota. Nat Rev Microbiol 10: 323-335.
    • (2012) Nat Rev Microbiol , vol.10 , pp. 323-335
    • Koropatkin, N.M.1    Cameron, E.A.2    Martens, E.C.3
  • 36
    • 79955894106 scopus 로고    scopus 로고
    • Microviridae goes temperate: microvirus-related proviruses reside in the genomes of Bacteroidetes
    • Krupovic, M., and Forterre, P. (2011) Microviridae goes temperate: microvirus-related proviruses reside in the genomes of Bacteroidetes. PLoS ONE 6: e19893.
    • (2011) PLoS ONE , vol.6
    • Krupovic, M.1    Forterre, P.2
  • 37
    • 84941270425 scopus 로고    scopus 로고
    • Spatial variation of the colonic microbiota in patients with ulcerative colitis and control volunteers
    • Lavelle, A., Lennon, G., O'Sullivan, O., Docherty, N., Balfe, A., Maguire, A., etal. (2015) Spatial variation of the colonic microbiota in patients with ulcerative colitis and control volunteers. Gut 64: 1553-1561.
    • (2015) Gut , vol.64 , pp. 1553-1561
    • Lavelle, A.1    Lennon, G.2    O'Sullivan, O.3    Docherty, N.4    Balfe, A.5    Maguire, A.6
  • 38
    • 39649093188 scopus 로고    scopus 로고
    • Dysbiosis in inflammatory bowel disease: a role for bacteriophages?
    • Lepage, P., Colombet, J., Marteau, P., Sime-Ngando, T., Dore, J., and Leclerc, M. (2008) Dysbiosis in inflammatory bowel disease: a role for bacteriophages? Gut 57: 424-425.
    • (2008) Gut , vol.57 , pp. 424-425
    • Lepage, P.1    Colombet, J.2    Marteau, P.3    Sime-Ngando, T.4    Dore, J.5    Leclerc, M.6
  • 39
    • 58149183697 scopus 로고    scopus 로고
    • ARDB - antibiotic resistance genes database
    • Liu, B., and Pop, M. (2009) ARDB - antibiotic resistance genes database. Nucleic Acids Res 37: D443-D447.
    • (2009) Nucleic Acids Res , vol.37 , pp. D443-D447
    • Liu, B.1    Pop, M.2
  • 40
    • 84904999639 scopus 로고    scopus 로고
    • Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations
    • Looft, T., Allen, H.K., Cantarel, B.L., Levine, U.Y., Bayles, D.O., Alt, D.P., etal. (2014) Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations. ISME J 8: 1566-1576.
    • (2014) ISME J , vol.8 , pp. 1566-1576
    • Looft, T.1    Allen, H.K.2    Cantarel, B.L.3    Levine, U.Y.4    Bayles, D.O.5    Alt, D.P.6
  • 42
    • 80053528043 scopus 로고    scopus 로고
    • The human gut virome: inter-individual variation and dynamic response to diet
    • Minot, S., Sinha, R., Chen, J., Li, H., Keilbaugh, S.A., Wu, G.D., etal. (2011) The human gut virome: inter-individual variation and dynamic response to diet. Genome Res 21: 1616-1625.
    • (2011) Genome Res , vol.21 , pp. 1616-1625
    • Minot, S.1    Sinha, R.2    Chen, J.3    Li, H.4    Keilbaugh, S.A.5    Wu, G.D.6
  • 45
    • 84880509968 scopus 로고    scopus 로고
    • Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome
    • Modi, S.R., Lee, H.H., Spina, C.S., and Collins, J.J. (2013) Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome. Nature 499: 219-222.
    • (2013) Nature , vol.499 , pp. 219-222
    • Modi, S.R.1    Lee, H.H.2    Spina, C.S.3    Collins, J.J.4
  • 46
    • 79959496268 scopus 로고    scopus 로고
    • Diversity of the autochthonous colonic microbiota
    • Nava, G.M., and Stappenbeck, T.S. (2011) Diversity of the autochthonous colonic microbiota. Gut Microbes 2: 99-104.
    • (2011) Gut Microbes , vol.2 , pp. 99-104
    • Nava, G.M.1    Stappenbeck, T.S.2
  • 47
    • 79953025268 scopus 로고    scopus 로고
    • Spatial organization of intestinal microbiota in the mouse ascending colon
    • Nava, G.M., Friedrichsen, H.J., and Stappenbeck, T.S. (2011) Spatial organization of intestinal microbiota in the mouse ascending colon. ISME J 5: 627-638.
    • (2011) ISME J , vol.5 , pp. 627-638
    • Nava, G.M.1    Friedrichsen, H.J.2    Stappenbeck, T.S.3
  • 48
    • 84922245262 scopus 로고    scopus 로고
    • Disease-specific alterations in the enteric virome in inflammatory bowel disease
    • Norman, J.M., Handley, S.A., Baldridge, M.T., Droit, L., Liu, C.Y., Keller, B.C., etal. (2015) Disease-specific alterations in the enteric virome in inflammatory bowel disease. Cell 160: 447-460.
    • (2015) Cell , vol.160 , pp. 447-460
    • Norman, J.M.1    Handley, S.A.2    Baldridge, M.T.3    Droit, L.4    Liu, C.Y.5    Keller, B.C.6
  • 49
    • 84884239907 scopus 로고    scopus 로고
    • Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences
    • Ogilvie, L.A., Bowler, L.D., Caplin, J., Dedi, C., Diston, D., Cheek, E., etal. (2013) Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences. Nat Commun 4: 2420.
    • (2013) Nat Commun , vol.4 , pp. 2420
    • Ogilvie, L.A.1    Bowler, L.D.2    Caplin, J.3    Dedi, C.4    Diston, D.5    Cheek, E.6
  • 51
    • 84861760530 scopus 로고    scopus 로고
    • IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
    • Peng, Y., Leung, H.C., Yiu, S.M., and Chin, F.Y. (2012) IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics 28: 1420-1428.
    • (2012) Bioinformatics , vol.28 , pp. 1420-1428
    • Peng, Y.1    Leung, H.C.2    Yiu, S.M.3    Chin, F.Y.4
  • 52
  • 53
    • 84865169911 scopus 로고    scopus 로고
    • Going viral: next-generation sequencing applied to phage populations in the human gut
    • Reyes, A., Semenkovich, N.P., Whiteson, K., Rohwer, F., and Gordon, J.I. (2012) Going viral: next-generation sequencing applied to phage populations in the human gut. Nat Rev Microbiol 10: 607-617.
    • (2012) Nat Rev Microbiol , vol.10 , pp. 607-617
    • Reyes, A.1    Semenkovich, N.P.2    Whiteson, K.3    Rohwer, F.4    Gordon, J.I.5
  • 54
    • 84890281518 scopus 로고    scopus 로고
    • Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut
    • Reyes, A., Wu, M., McNulty, N.P., Rohwer, F.L., and Gordon, J.I. (2013) Gnotobiotic mouse model of phage-bacterial host dynamics in the human gut. Proc Natl Acad Sci USA 110: 20236-20241.
    • (2013) Proc Natl Acad Sci USA , vol.110 , pp. 20236-20241
    • Reyes, A.1    Wu, M.2    McNulty, N.P.3    Rohwer, F.L.4    Gordon, J.I.5
  • 55
    • 84883478660 scopus 로고    scopus 로고
    • Gut microbiota from twins discordant for obesity modulate metabolism in mice
    • Ridaura, V.K., Faith, J.J., Rey, F.E., Cheng, J., Duncan, A.E., Kau, A.L., etal. (2013) Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science 341: 1241214.
    • (2013) Science , vol.341 , pp. 1241214
    • Ridaura, V.K.1    Faith, J.J.2    Rey, F.E.3    Cheng, J.4    Duncan, A.E.5    Kau, A.L.6
  • 57
    • 79952422304 scopus 로고    scopus 로고
    • Quality control and preprocessing of metagenomic datasets
    • Schmieder, R., and Edwards, R. (2011) Quality control and preprocessing of metagenomic datasets. Bioinformatics 27: 863-864.
    • (2011) Bioinformatics , vol.27 , pp. 863-864
    • Schmieder, R.1    Edwards, R.2
  • 59
    • 84908325271 scopus 로고    scopus 로고
    • Artificial sweeteners induce glucose intolerance by altering the gut microbiota
    • Suez, J., Korem, T., Zeevi, D., Zilberman-Schapira, G., Thaiss, C.A., Maza, O., etal. (2014) Artificial sweeteners induce glucose intolerance by altering the gut microbiota. Nature 514: 181-186.
    • (2014) Nature , vol.514 , pp. 181-186
    • Suez, J.1    Korem, T.2    Zeevi, D.3    Zilberman-Schapira, G.4    Thaiss, C.A.5    Maza, O.6
  • 61
    • 77950669604 scopus 로고    scopus 로고
    • The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice
    • 6ra14
    • Turnbaugh, P.J., Ridaura, V.K., Faith, J.J., Rey, F.E., Knight, R., and Gordon, J.I. (2009) The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Sci Transl Med 1: 6ra14.
    • (2009) Sci Transl Med , vol.1
    • Turnbaugh, P.J.1    Ridaura, V.K.2    Faith, J.J.3    Rey, F.E.4    Knight, R.5    Gordon, J.I.6
  • 62
    • 84866461477 scopus 로고    scopus 로고
    • Familial transmission rather than defective innate immunity shapes the distinct intestinal microbiota of TLR-deficient mice
    • Ubeda, C., Lipuma, L., Gobourne, A., Viale, A., Leiner, I., Equinda, M., etal. (2012) Familial transmission rather than defective innate immunity shapes the distinct intestinal microbiota of TLR-deficient mice. J Exp Med 209: 1445-1456.
    • (2012) J Exp Med , vol.209 , pp. 1445-1456
    • Ubeda, C.1    Lipuma, L.2    Gobourne, A.3    Viale, A.4    Leiner, I.5    Equinda, M.6
  • 64
    • 79952755048 scopus 로고    scopus 로고
    • Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity
    • Willner, D., Furlan, M., Schmieder, R., Grasis, J.A., Pride, D.T., Relman, D.A., etal. (2011) Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity. Proc Natl Acad Sci USA 108 (Suppl. 1): 4547-4553.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 4547-4553
    • Willner, D.1    Furlan, M.2    Schmieder, R.3    Grasis, J.A.4    Pride, D.T.5    Relman, D.A.6
  • 65
    • 80053618114 scopus 로고    scopus 로고
    • Linking long-term dietary patterns with gut microbial enterotypes
    • Wu, G.D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.Y., Keilbaugh, S.A., etal. (2011a) Linking long-term dietary patterns with gut microbial enterotypes. Science 334: 105-108.
    • (2011) Science , vol.334 , pp. 105-108
    • Wu, G.D.1    Chen, J.2    Hoffmann, C.3    Bittinger, K.4    Chen, Y.Y.5    Keilbaugh, S.A.6
  • 66
    • 80052606131 scopus 로고    scopus 로고
    • WebMGA: a customizable web server for fast metagenomic sequence analysis
    • Wu, S., Zhu, Z., Fu, L., Niu, B., and Li, W. (2011b) WebMGA: a customizable web server for fast metagenomic sequence analysis. BMC Genomics 12: 444.
    • (2011) BMC Genomics , vol.12 , pp. 444
    • Wu, S.1    Zhu, Z.2    Fu, L.3    Niu, B.4    Li, W.5
  • 67
    • 84926248729 scopus 로고    scopus 로고
    • Biogeography of the intestinal mucosal and lumenal microbiome in the rhesus macaque
    • Yasuda, K., Oh, K., Ren, B., Tickle, T.L., Franzosa, E.A., Wachtman, L.M., etal. (2015) Biogeography of the intestinal mucosal and lumenal microbiome in the rhesus macaque. Cell Host Microbe 17: 385-391.
    • (2015) Cell Host Microbe , vol.17 , pp. 385-391
    • Yasuda, K.1    Oh, K.2    Ren, B.3    Tickle, T.L.4    Franzosa, E.A.5    Wachtman, L.M.6
  • 68
    • 84899452861 scopus 로고    scopus 로고
    • Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota
    • Zhang, Z., Geng, J., Tang, X., Fan, H., Xu, J., Wen, X., etal. (2014) Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota. ISME J 8: 881-893.
    • (2014) ISME J , vol.8 , pp. 881-893
    • Zhang, Z.1    Geng, J.2    Tang, X.3    Fan, H.4    Xu, J.5    Wen, X.6
  • 70
    • 77955902981 scopus 로고    scopus 로고
    • Ab initio gene identification in metagenomic sequences
    • Zhu, W., Lomsadze, A., and Borodovsky, M. (2010) Ab initio gene identification in metagenomic sequences. Nucleic Acids Res 38: e132.
    • (2010) Nucleic Acids Res , vol.38 , pp. e132
    • Zhu, W.1    Lomsadze, A.2    Borodovsky, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.