-
1
-
-
84879373085
-
Recent developments in Blastocystis research
-
1 Clark, C.G., van der Giezen, M., Alfellani, M.A., Stensvold, C.R., Recent developments in Blastocystis research. Adv. Parasitol. 82 (2013), 1–32.
-
(2013)
Adv. Parasitol.
, vol.82
, pp. 1-32
-
-
Clark, C.G.1
van der Giezen, M.2
Alfellani, M.A.3
Stensvold, C.R.4
-
2
-
-
84992724136
-
Current status of Blastocystis: a personal view
-
2 Stensvold, C.R., Clark, C.G., Current status of Blastocystis: a personal view. Parasitol. Int. 65:6 Pt B (2016), 763–771.
-
(2016)
Parasitol. Int.
, vol.65
, Issue.6
, pp. 763-771
-
-
Stensvold, C.R.1
Clark, C.G.2
-
3
-
-
79953094250
-
Genome sequence of the stramenopile Blastocystis, a human anaerobic parasite
-
3 Denoeud, F., Roussel, M., Noel, B., Wawrzyniak, I., Da Silva, C., Diogon, M., Viscogliosi, E., Brochier-Armanet, C., Couloux, A., Poulain, J., et al. Genome sequence of the stramenopile Blastocystis, a human anaerobic parasite. Genome Biol., 12, 2011, R29.
-
(2011)
Genome Biol.
, vol.12
, pp. R29
-
-
Denoeud, F.1
Roussel, M.2
Noel, B.3
Wawrzyniak, I.4
Da Silva, C.5
Diogon, M.6
Viscogliosi, E.7
Brochier-Armanet, C.8
Couloux, A.9
Poulain, J.10
-
4
-
-
84929416762
-
Draft genome sequence of the intestinal parasite Blastocystis subtype 4-isolate WR1
-
4 Wawrzyniak, I., Courtine, D., Osman, M., Hubans-Pierlot, C., Cian, A., Nourrisson, C., Chabe, M., Poirier, P., Bart, A., Polonais, V., et al. Draft genome sequence of the intestinal parasite Blastocystis subtype 4-isolate WR1. Genom. Data 4 (2015), 22–23.
-
(2015)
Genom. Data
, vol.4
, pp. 22-23
-
-
Wawrzyniak, I.1
Courtine, D.2
Osman, M.3
Hubans-Pierlot, C.4
Cian, A.5
Nourrisson, C.6
Chabe, M.7
Poirier, P.8
Bart, A.9
Polonais, V.10
-
5
-
-
84949209280
-
A retrospective metagenomics approach to studying Blastocystis
-
5 Andersen, L.O.B., Bonde, I., Nielsen, H.B.H.B., Stensvold, C.R., A retrospective metagenomics approach to studying Blastocystis. FEMS Microbiol. Ecol., 91, 2015, fiv072.
-
(2015)
FEMS Microbiol. Ecol.
, vol.91
, pp. fiv072
-
-
Andersen, L.O.B.1
Bonde, I.2
Nielsen, H.B.H.B.3
Stensvold, C.R.4
-
6
-
-
34548768028
-
Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes
-
6 Dunning Hotopp, J.C., Clark, M.E., Oliveira, D.C.S.G., Foster, J.M., Fischer, P., Muñoz Torres, M.C., Giebel, J.D., Kumar, N., Ishmael, N., Wang, S., et al. Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes. Science 317 (2007), 1753–1756.
-
(2007)
Science
, vol.317
, pp. 1753-1756
-
-
Dunning Hotopp, J.C.1
Clark, M.E.2
Oliveira, D.C.S.G.3
Foster, J.M.4
Fischer, P.5
Muñoz Torres, M.C.6
Giebel, J.D.7
Kumar, N.8
Ishmael, N.9
Wang, S.10
-
7
-
-
84905465132
-
Horizontal gene transfer in eukaryotic plant pathogens
-
7 Soanes, D., Richards, T.A., Horizontal gene transfer in eukaryotic plant pathogens. Annu. Rev. Phytopathol. 52 (2014), 583–614.
-
(2014)
Annu. Rev. Phytopathol.
, vol.52
, pp. 583-614
-
-
Soanes, D.1
Richards, T.A.2
-
8
-
-
84874163102
-
Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes
-
8 Alsmark, C., Foster, P.G., Sicheritz-Ponten, T., Nakjang, S., Martin Embley, T., Hirt, R.P., Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes. Genome Biol., 14, 2013, R19.
-
(2013)
Genome Biol.
, vol.14
, pp. R19
-
-
Alsmark, C.1
Foster, P.G.2
Sicheritz-Ponten, T.3
Nakjang, S.4
Martin Embley, T.5
Hirt, R.P.6
-
9
-
-
84937507813
-
Endosymbiotic gene transfer from prokaryotic pangenomes: Inherited chimerism in eukaryotes
-
9 Ku, C., Nelson-Sathi, S., Roettger, M., Garg, S., Hazkani-Covo, E., Martin, W.F., Endosymbiotic gene transfer from prokaryotic pangenomes: Inherited chimerism in eukaryotes. Proc. Natl. Acad. Sci. USA 112 (2015), 10139–10146.
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, pp. 10139-10146
-
-
Ku, C.1
Nelson-Sathi, S.2
Roettger, M.3
Garg, S.4
Hazkani-Covo, E.5
Martin, W.F.6
-
10
-
-
84995794392
-
A natural barrier to lateral gene transfer from prokaryotes to eukaryotes revealed from genomes: the 70 % rule
-
10 Ku, C., Martin, W.F., A natural barrier to lateral gene transfer from prokaryotes to eukaryotes revealed from genomes: the 70 % rule. BMC Biol., 14, 2016, 89.
-
(2016)
BMC Biol.
, vol.14
, pp. 89
-
-
Ku, C.1
Martin, W.F.2
-
11
-
-
84927171650
-
A large number of nuclear genes in the human parasite blastocystis require mRNA polyadenylation to create functional termination codons
-
11 Klimeš, V., Gentekaki, E., Roger, A.J., Eliáš, M., A large number of nuclear genes in the human parasite blastocystis require mRNA polyadenylation to create functional termination codons. Genome Biol. Evol. 6 (2014), 1956–1961.
-
(2014)
Genome Biol. Evol.
, vol.6
, pp. 1956-1961
-
-
Klimeš, V.1
Gentekaki, E.2
Roger, A.J.3
Eliáš, M.4
-
12
-
-
84879744885
-
The long-term stability of the human gut microbiota
-
12 Faith, J.J., Guruge, J.L., Charbonneau, M., Subramanian, S., Seedorf, H., Goodman, A.L., Clemente, J.C., Knight, R., Heath, A.C., Leibel, R.L., et al. The long-term stability of the human gut microbiota. Science, 341, 2013, 1237439.
-
(2013)
Science
, vol.341
, pp. 1237439
-
-
Faith, J.J.1
Guruge, J.L.2
Charbonneau, M.3
Subramanian, S.4
Seedorf, H.5
Goodman, A.L.6
Clemente, J.C.7
Knight, R.8
Heath, A.C.9
Leibel, R.L.10
-
13
-
-
77953620332
-
High levels of oxidative stress in rats infected with Blastocystis hominis
-
13 Chandramathi, S., Suresh, K., Shuba, S., Mahmood, A., Kuppusamy, U.R., High levels of oxidative stress in rats infected with Blastocystis hominis. Parasitology 137 (2010), 605–611.
-
(2010)
Parasitology
, vol.137
, pp. 605-611
-
-
Chandramathi, S.1
Suresh, K.2
Shuba, S.3
Mahmood, A.4
Kuppusamy, U.R.5
-
14
-
-
84876166199
-
Methylglyoxal, oxidative stress, and aging
-
S. Bondy K. Maiese Humana
-
14 Kalapos, M.P., Desai, K.M., Wu, L., Methylglyoxal, oxidative stress, and aging. Bondy, S., Maiese, K., (eds.) Aging and Age-Related Disorders, 2010, Humana, 149–167.
-
(2010)
Aging and Age-Related Disorders
, pp. 149-167
-
-
Kalapos, M.P.1
Desai, K.M.2
Wu, L.3
-
15
-
-
78649731697
-
Bacterial metabolic ‘toxins’: a new mechanism for lactose and food intolerance, and irritable bowel syndrome
-
15 Campbell, A.K., Matthews, S.B., Vassel, N., Cox, C.D., Naseem, R., Chaichi, J., Holland, I.B., Green, J., Wann, K.T., Bacterial metabolic ‘toxins’: a new mechanism for lactose and food intolerance, and irritable bowel syndrome. Toxicology 278 (2010), 268–276.
-
(2010)
Toxicology
, vol.278
, pp. 268-276
-
-
Campbell, A.K.1
Matthews, S.B.2
Vassel, N.3
Cox, C.D.4
Naseem, R.5
Chaichi, J.6
Holland, I.B.7
Green, J.8
Wann, K.T.9
-
16
-
-
0035350814
-
Clostridium beijerinckii and Clostridium difficile detoxify methylglyoxal by a novel mechanism involving glycerol dehydrogenase
-
16 Liyanage, H., Kashket, S., Young, M., Kashket, E.R., Clostridium beijerinckii and Clostridium difficile detoxify methylglyoxal by a novel mechanism involving glycerol dehydrogenase. Appl. Environ. Microbiol. 67 (2001), 2004–2010.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2004-2010
-
-
Liyanage, H.1
Kashket, S.2
Young, M.3
Kashket, E.R.4
-
17
-
-
65549126370
-
Proteomic comparison of Entamoeba histolytica and Entamoeba dispar and the role of E. histolytica alcohol dehydrogenase 3 in virulence
-
17 Davis, P.H., Chen, M., Zhang, X., Clark, C.G., Townsend, R.R., Stanley, S.L. Jr., Proteomic comparison of Entamoeba histolytica and Entamoeba dispar and the role of E. histolytica alcohol dehydrogenase 3 in virulence. PLoS Negl. Trop. Dis., 3, 2009, e415.
-
(2009)
PLoS Negl. Trop. Dis.
, vol.3
, pp. e415
-
-
Davis, P.H.1
Chen, M.2
Zhang, X.3
Clark, C.G.4
Townsend, R.R.5
Stanley, S.L.6
-
18
-
-
0141619386
-
Isolation and characterization of a novel human thioredoxin-like gene hTLP19 encoding a secretory protein
-
18 Liu, F., Rong, Y.P., Zeng, L.C., Zhang, X., Han, Z.G., Isolation and characterization of a novel human thioredoxin-like gene hTLP19 encoding a secretory protein. Gene 315 (2003), 71–78.
-
(2003)
Gene
, vol.315
, pp. 71-78
-
-
Liu, F.1
Rong, Y.P.2
Zeng, L.C.3
Zhang, X.4
Han, Z.G.5
-
19
-
-
0023880696
-
Chemotactic behavior of Campylobacter jejuni
-
19 Hugdahl, M.B., Beery, J.T., Doyle, M.P., Chemotactic behavior of Campylobacter jejuni. Infect. Immun. 56 (1988), 1560–1566.
-
(1988)
Infect. Immun.
, vol.56
, pp. 1560-1566
-
-
Hugdahl, M.B.1
Beery, J.T.2
Doyle, M.P.3
-
20
-
-
84908403149
-
Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness
-
20 Pickard, J.M., Maurice, C.F., Kinnebrew, M.A., Abt, M.C., Schenten, D., Golovkina, T.V., Bogatyrev, S.R., Ismagilov, R.F., Pamer, E.G., Turnbaugh, P.J., Chervonsky, A.V., Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness. Nature 514 (2014), 638–641.
-
(2014)
Nature
, vol.514
, pp. 638-641
-
-
Pickard, J.M.1
Maurice, C.F.2
Kinnebrew, M.A.3
Abt, M.C.4
Schenten, D.5
Golovkina, T.V.6
Bogatyrev, S.R.7
Ismagilov, R.F.8
Pamer, E.G.9
Turnbaugh, P.J.10
Chervonsky, A.V.11
-
21
-
-
0029845965
-
A model of host-microbial interactions in an open mammalian ecosystem
-
21 Bry, L., Falk, P.G., Midtvedt, T., Gordon, J.I., A model of host-microbial interactions in an open mammalian ecosystem. Science 273 (1996), 1380–1383.
-
(1996)
Science
, vol.273
, pp. 1380-1383
-
-
Bry, L.1
Falk, P.G.2
Midtvedt, T.3
Gordon, J.I.4
-
22
-
-
0035054508
-
Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity
-
22 Hooper, L.V., Gordon, J.I., Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity. Glycobiology 11 (2001), 1R–10R.
-
(2001)
Glycobiology
, vol.11
, pp. 1R-10R
-
-
Hooper, L.V.1
Gordon, J.I.2
-
23
-
-
62849083844
-
Differential carbohydrate recognition by Campylobacter jejuni strain 11168: influences of temperature and growth conditions
-
23 Day, C.J., Tiralongo, J., Hartnell, R.D., Logue, C.A., Wilson, J.C., von Itzstein, M., Korolik, V., Differential carbohydrate recognition by Campylobacter jejuni strain 11168: influences of temperature and growth conditions. PLoS ONE, 4, 2009, e4927.
-
(2009)
PLoS ONE
, vol.4
, pp. e4927
-
-
Day, C.J.1
Tiralongo, J.2
Hartnell, R.D.3
Logue, C.A.4
Wilson, J.C.5
von Itzstein, M.6
Korolik, V.7
-
24
-
-
0037470975
-
A genomic view of the human-Bacteroides thetaiotaomicron symbiosis
-
24 Xu, J., Bjursell, M.K., Himrod, J., Deng, S., Carmichael, L.K., Chiang, H.C., Hooper, L.V., Gordon, J.I., A genomic view of the human-Bacteroides thetaiotaomicron symbiosis. Science 299 (2003), 2074–2076.
-
(2003)
Science
, vol.299
, pp. 2074-2076
-
-
Xu, J.1
Bjursell, M.K.2
Himrod, J.3
Deng, S.4
Carmichael, L.K.5
Chiang, H.C.6
Hooper, L.V.7
Gordon, J.I.8
-
25
-
-
79955556849
-
L-fucose utilization provides Campylobacter jejuni with a competitive advantage
-
25 Stahl, M., Friis, L.M., Nothaft, H., Liu, X., Li, J., Szymanski, C.M., Stintzi, A., L-fucose utilization provides Campylobacter jejuni with a competitive advantage. Proc. Natl. Acad. Sci. USA 108 (2011), 7194–7199.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 7194-7199
-
-
Stahl, M.1
Friis, L.M.2
Nothaft, H.3
Liu, X.4
Li, J.5
Szymanski, C.M.6
Stintzi, A.7
-
26
-
-
0013238319
-
Campylobacter jejuni binds intestinal H(O) antigen (Fuc alpha 1, 2Gal beta 1, 4GlcNAc), and fucosyloligosaccharides of human milk inhibit its binding and infection
-
26 Ruiz-Palacios, G.M., Cervantes, L.E., Ramos, P., Chavez-Munguia, B., Newburg, D.S., Campylobacter jejuni binds intestinal H(O) antigen (Fuc alpha 1, 2Gal beta 1, 4GlcNAc), and fucosyloligosaccharides of human milk inhibit its binding and infection. J. Biol. Chem. 278 (2003), 14112–14120.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 14112-14120
-
-
Ruiz-Palacios, G.M.1
Cervantes, L.E.2
Ramos, P.3
Chavez-Munguia, B.4
Newburg, D.S.5
-
27
-
-
0030152963
-
Identification of surface coat carbohydrates in Blastocystis hominis by lectin probes
-
27 Lanuza, M.D., Carbajal, J.A., Borrás, R., Identification of surface coat carbohydrates in Blastocystis hominis by lectin probes. Int. J. Parasitol. 26 (1996), 527–532.
-
(1996)
Int. J. Parasitol.
, vol.26
, pp. 527-532
-
-
Lanuza, M.D.1
Carbajal, J.A.2
Borrás, R.3
-
28
-
-
27144437574
-
Biochemical and mutational analysis of glutamine synthetase type III from the rumen anaerobe Ruminococcus albus 8
-
28 Amaya, K.R., Kocherginskaya, S.A., Mackie, R.I., Cann, I.K.O., Biochemical and mutational analysis of glutamine synthetase type III from the rumen anaerobe Ruminococcus albus 8. J. Bacteriol. 187 (2005), 7481–7491.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 7481-7491
-
-
Amaya, K.R.1
Kocherginskaya, S.A.2
Mackie, R.I.3
Cann, I.K.O.4
-
29
-
-
84862492833
-
Glutamine versus ammonia utilization in the NAD synthetase family
-
29 De Ingeniis, J., Kazanov, M.D., Shatalin, K., Gelfand, M.S., Osterman, A.L., Sorci, L., Glutamine versus ammonia utilization in the NAD synthetase family. PLoS ONE, 7, 2012, e39115.
-
(2012)
PLoS ONE
, vol.7
, pp. e39115
-
-
De Ingeniis, J.1
Kazanov, M.D.2
Shatalin, K.3
Gelfand, M.S.4
Osterman, A.L.5
Sorci, L.6
-
30
-
-
84903367764
-
Metabolic and bactericidal effects of targeted suppression of NadD and NadE enzymes in mycobacteria
-
e00747–13
-
30 Rodionova, I.A., Schuster, B.M., Guinn, K.M., Sorci, L., Scott, D.A., Li, X., Kheterpal, I., Shoen, C., Cynamon, M., Locher, C., et al. Metabolic and bactericidal effects of targeted suppression of NadD and NadE enzymes in mycobacteria. MBio, 5, 2014 e00747–13.
-
(2014)
MBio
, vol.5
-
-
Rodionova, I.A.1
Schuster, B.M.2
Guinn, K.M.3
Sorci, L.4
Scott, D.A.5
Li, X.6
Kheterpal, I.7
Shoen, C.8
Cynamon, M.9
Locher, C.10
-
31
-
-
61849150037
-
Virtual screening to identify lead inhibitors for bacterial NAD synthetase (NADs)
-
31 Moro, W.B., Yang, Z., Kane, T.A., Brouillette, C.G., Brouillette, W.J., Virtual screening to identify lead inhibitors for bacterial NAD synthetase (NADs). Bioorg. Med. Chem. Lett. 19 (2009), 2001–2005.
-
(2009)
Bioorg. Med. Chem. Lett.
, vol.19
, pp. 2001-2005
-
-
Moro, W.B.1
Yang, Z.2
Kane, T.A.3
Brouillette, C.G.4
Brouillette, W.J.5
-
32
-
-
34250161577
-
Antibacterial nicotinamide adenine dinucleotide synthetase inhibitors: amide- and ether-linked tethered dimers with α-amino acid end groups
-
32 Velu, S.E., Mou, L., Luan, C.-H., Yang, Z.W., DeLucas, L.J., Brouillette, C.G., Brouillette, W.J., Antibacterial nicotinamide adenine dinucleotide synthetase inhibitors: amide- and ether-linked tethered dimers with α-amino acid end groups. J. Med. Chem. 50 (2007), 2612–2621.
-
(2007)
J. Med. Chem.
, vol.50
, pp. 2612-2621
-
-
Velu, S.E.1
Mou, L.2
Luan, C.-H.3
Yang, Z.W.4
DeLucas, L.J.5
Brouillette, C.G.6
Brouillette, W.J.7
-
33
-
-
65649151404
-
NAD(P) biosynthesis enzymes as potential targets for selective drug design
-
33 Magni, G., Di Stefano, M., Orsomando, G., Raffaelli, N., Ruggieri, S., NAD(P) biosynthesis enzymes as potential targets for selective drug design. Curr. Med. Chem. 16 (2009), 1372–1390.
-
(2009)
Curr. Med. Chem.
, vol.16
, pp. 1372-1390
-
-
Magni, G.1
Di Stefano, M.2
Orsomando, G.3
Raffaelli, N.4
Ruggieri, S.5
-
34
-
-
42149138547
-
Reduction of polynitroaromatic compounds: the bacterial nitroreductases
-
34 Roldán, M.D., Pérez-Reinado, E., Castillo, F., Moreno-Vivián, C., Reduction of polynitroaromatic compounds: the bacterial nitroreductases. FEMS Microbiol. Rev. 32 (2008), 474–500.
-
(2008)
FEMS Microbiol. Rev.
, vol.32
, pp. 474-500
-
-
Roldán, M.D.1
Pérez-Reinado, E.2
Castillo, F.3
Moreno-Vivián, C.4
-
35
-
-
84860012273
-
Nitroreductases: enzymes with environmental, biotechnological and clinical importance
-
A. Mendez-Vilas Formatex Research Center
-
35 De Oliveira, I.M., Bonatto, D., Antonio, J., Henriques, J.A.P., Nitroreductases: enzymes with environmental, biotechnological and clinical importance. Mendez-Vilas, A., (eds.) Current Research, Technology and Education Topics in Applied Microbiology and Microbial Biotechnology, 2010, Formatex Research Center, 1008–1019.
-
(2010)
Current Research, Technology and Education Topics in Applied Microbiology and Microbial Biotechnology
, pp. 1008-1019
-
-
De Oliveira, I.M.1
Bonatto, D.2
Antonio, J.3
Henriques, J.A.P.4
-
36
-
-
79960472745
-
Pyruvate:ferredoxin oxidoreductase and thioredoxin reductase are involved in 5-nitroimidazole activation while flavin metabolism is linked to 5-nitroimidazole resistance in Giardia lamblia
-
36 Leitsch, D., Burgess, A.G., Dunn, L.A., Krauer, K.G., Tan, K., Duchêne, M., Upcroft, P., Eckmann, L., Upcroft, J.A., Pyruvate:ferredoxin oxidoreductase and thioredoxin reductase are involved in 5-nitroimidazole activation while flavin metabolism is linked to 5-nitroimidazole resistance in Giardia lamblia. J. Antimicrob. Chemother. 66 (2011), 1756–1765.
-
(2011)
J. Antimicrob. Chemother.
, vol.66
, pp. 1756-1765
-
-
Leitsch, D.1
Burgess, A.G.2
Dunn, L.A.3
Krauer, K.G.4
Tan, K.5
Duchêne, M.6
Upcroft, P.7
Eckmann, L.8
Upcroft, J.A.9
-
37
-
-
53449090144
-
Biochemical characterization of a mitochondrial-like organelle from Blastocystis sp. subtype 7
-
37 Lantsman, Y., Tan, K.S.W., Morada, M., Yarlett, N., Biochemical characterization of a mitochondrial-like organelle from Blastocystis sp. subtype 7. Microbiology 154 (2008), 2757–2766.
-
(2008)
Microbiology
, vol.154
, pp. 2757-2766
-
-
Lantsman, Y.1
Tan, K.S.W.2
Morada, M.3
Yarlett, N.4
-
38
-
-
78751690774
-
A rapid, high-throughput viability assay for Blastocystis spp. reveals metronidazole resistance and extensive subtype-dependent variations in drug susceptibilities
-
38 Mirza, H., Teo, J.D.W., Upcroft, J., Tan, K.S.W., A rapid, high-throughput viability assay for Blastocystis spp. reveals metronidazole resistance and extensive subtype-dependent variations in drug susceptibilities. Antimicrob. Agents Chemother. 55 (2011), 637–648.
-
(2011)
Antimicrob. Agents Chemother.
, vol.55
, pp. 637-648
-
-
Mirza, H.1
Teo, J.D.W.2
Upcroft, J.3
Tan, K.S.W.4
-
39
-
-
0033617363
-
Cloning, expression, and characterization of a novel UDP-galactose:beta-N-acetylglucosamine beta1,3-galactosyltransferase (beta3Gal-T5) responsible for synthesis of type 1 chain in colorectal and pancreatic epithelia and tumor cells derived therefrom
-
39 Isshiki, S., Togayachi, A., Kudo, T., Nishihara, S., Watanabe, M., Kubota, T., Kitajima, M., Shiraishi, N., Sasaki, K., Andoh, T., Narimatsu, H., Cloning, expression, and characterization of a novel UDP-galactose:beta-N-acetylglucosamine beta1,3-galactosyltransferase (beta3Gal-T5) responsible for synthesis of type 1 chain in colorectal and pancreatic epithelia and tumor cells derived therefrom. J. Biol. Chem. 274 (1999), 12499–12507.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 12499-12507
-
-
Isshiki, S.1
Togayachi, A.2
Kudo, T.3
Nishihara, S.4
Watanabe, M.5
Kubota, T.6
Kitajima, M.7
Shiraishi, N.8
Sasaki, K.9
Andoh, T.10
Narimatsu, H.11
-
40
-
-
45049086147
-
Relevance of fucosylation and Lewis antigen expression in the bacterial gastroduodenal pathogen Helicobacter pylori
-
40 Moran, A.P., Relevance of fucosylation and Lewis antigen expression in the bacterial gastroduodenal pathogen Helicobacter pylori. Carbohydr. Res. 343 (2008), 1952–1965.
-
(2008)
Carbohydr. Res.
, vol.343
, pp. 1952-1965
-
-
Moran, A.P.1
-
41
-
-
3843114339
-
Carbohydrate mimicry between human ganglioside GM1 and Campylobacter jejuni lipooligosaccharide causes Guillain-Barre syndrome
-
41 Yuki, N., Susuki, K., Koga, M., Nishimoto, Y., Odaka, M., Hirata, K., Taguchi, K., Miyatake, T., Furukawa, K., Kobata, T., Yamada, M., Carbohydrate mimicry between human ganglioside GM1 and Campylobacter jejuni lipooligosaccharide causes Guillain-Barre syndrome. Proc. Natl. Acad. Sci. USA 101 (2004), 11404–11409.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 11404-11409
-
-
Yuki, N.1
Susuki, K.2
Koga, M.3
Nishimoto, Y.4
Odaka, M.5
Hirata, K.6
Taguchi, K.7
Miyatake, T.8
Furukawa, K.9
Kobata, T.10
Yamada, M.11
-
42
-
-
33748462851
-
Cholesterol glucosylation promotes immune evasion by Helicobacter pylori
-
42 Wunder, C., Churin, Y., Winau, F., Warnecke, D., Vieth, M., Lindner, B., Zähringer, U., Mollenkopf, H.-J., Heinz, E., Meyer, T.F., Cholesterol glucosylation promotes immune evasion by Helicobacter pylori. Nat. Med. 12 (2006), 1030–1038.
-
(2006)
Nat. Med.
, vol.12
, pp. 1030-1038
-
-
Wunder, C.1
Churin, Y.2
Winau, F.3
Warnecke, D.4
Vieth, M.5
Lindner, B.6
Zähringer, U.7
Mollenkopf, H.-J.8
Heinz, E.9
Meyer, T.F.10
-
43
-
-
4043099127
-
Natural antibiotic function of a human gastric mucin against Helicobacter pylori infection
-
43 Kawakubo, M., Ito, Y., Okimura, Y., Kobayashi, M., Sakura, K., Kasama, S., Fukuda, M.N., Fukuda, M., Katsuyama, T., Nakayama, J., Natural antibiotic function of a human gastric mucin against Helicobacter pylori infection. Science 305 (2004), 1003–1006.
-
(2004)
Science
, vol.305
, pp. 1003-1006
-
-
Kawakubo, M.1
Ito, Y.2
Okimura, Y.3
Kobayashi, M.4
Sakura, K.5
Kasama, S.6
Fukuda, M.N.7
Fukuda, M.8
Katsuyama, T.9
Nakayama, J.10
-
44
-
-
0034823196
-
Mucin gene expression in intestinal epithelial cells in Crohn's disease
-
44 Buisine, M.P., Desreumaux, P., Leteurtre, E., Copin, M.C., Colombel, J.F., Porchet, N., Aubert, J.P., Mucin gene expression in intestinal epithelial cells in Crohn's disease. Gut 49 (2001), 544–551.
-
(2001)
Gut
, vol.49
, pp. 544-551
-
-
Buisine, M.P.1
Desreumaux, P.2
Leteurtre, E.3
Copin, M.C.4
Colombel, J.F.5
Porchet, N.6
Aubert, J.P.7
-
45
-
-
84876493328
-
Active ulcerative colitis associated with low prevalence of Blastocystis and Dientamoeba fragilis infection
-
45 Petersen, A.M., Stensvold, C.R., Mirsepasi, H., Engberg, J., Friis-Møller, A., Porsbo, L.J., Hammerum, A.M., Nordgaard-Lassen, I., Nielsen, H.V., Krogfelt, K.A., Active ulcerative colitis associated with low prevalence of Blastocystis and Dientamoeba fragilis infection. Scand. J. Gastroenterol. 48 (2013), 638–639.
-
(2013)
Scand. J. Gastroenterol.
, vol.48
, pp. 638-639
-
-
Petersen, A.M.1
Stensvold, C.R.2
Mirsepasi, H.3
Engberg, J.4
Friis-Møller, A.5
Porsbo, L.J.6
Hammerum, A.M.7
Nordgaard-Lassen, I.8
Nielsen, H.V.9
Krogfelt, K.A.10
-
46
-
-
84947804704
-
Genomic insights into the distribution, genetic diversity and evolution of polyketide synthases and nonribosomal peptide synthetases
-
46 Wang, H., Sivonen, K., Fewer, D.P., Genomic insights into the distribution, genetic diversity and evolution of polyketide synthases and nonribosomal peptide synthetases. Curr. Opin. Genet. Dev. 35 (2015), 79–85.
-
(2015)
Curr. Opin. Genet. Dev.
, vol.35
, pp. 79-85
-
-
Wang, H.1
Sivonen, K.2
Fewer, D.P.3
-
47
-
-
84861214012
-
New insights into Blastocystis spp.: a potential link with irritable bowel syndrome
-
47 Poirier, P., Wawrzyniak, I., Vivarès, C.P., Delbac, F., El Alaoui, H., New insights into Blastocystis spp.: a potential link with irritable bowel syndrome. PLoS Pathog., 8, 2012, e1002545.
-
(2012)
PLoS Pathog.
, vol.8
, pp. e1002545
-
-
Poirier, P.1
Wawrzyniak, I.2
Vivarès, C.P.3
Delbac, F.4
El Alaoui, H.5
-
48
-
-
0027243104
-
Nucleotide sequences and heterologous expression of tcmG and tcmP, biosynthetic genes for tetracenomycin C in Streptomyces glaucescens
-
48 Decker, H., Motamedi, H., Hutchinson, C.R., Nucleotide sequences and heterologous expression of tcmG and tcmP, biosynthetic genes for tetracenomycin C in Streptomyces glaucescens. J. Bacteriol. 175 (1993), 3876–3886.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3876-3886
-
-
Decker, H.1
Motamedi, H.2
Hutchinson, C.R.3
-
49
-
-
0037143585
-
Enzymes involved in fatty acid and polyketide biosynthesis in Streptomyces glaucescens: role of FabH and FabD and their acyl carrier protein specificity
-
49 Florova, G., Kazanina, G., Reynolds, K.A., Enzymes involved in fatty acid and polyketide biosynthesis in Streptomyces glaucescens: role of FabH and FabD and their acyl carrier protein specificity. Biochemistry 41 (2002), 10462–10471.
-
(2002)
Biochemistry
, vol.41
, pp. 10462-10471
-
-
Florova, G.1
Kazanina, G.2
Reynolds, K.A.3
-
50
-
-
0032474472
-
Reconstitution of the iterative type II polyketide synthase for tetracenomycin F2 biosynthesis
-
50 Bao, W., Wendt-Pienkowski, E., Hutchinson, C.R., Reconstitution of the iterative type II polyketide synthase for tetracenomycin F2 biosynthesis. Biochemistry 37 (1998), 8132–8138.
-
(1998)
Biochemistry
, vol.37
, pp. 8132-8138
-
-
Bao, W.1
Wendt-Pienkowski, E.2
Hutchinson, C.R.3
-
51
-
-
84873670839
-
Indole production by the tryptophanase TnaA in Escherichia coli is determined by the amount of exogenous tryptophan
-
51 Li, G., Young, K.D., Indole production by the tryptophanase TnaA in Escherichia coli is determined by the amount of exogenous tryptophan. Microbiology 159 (2013), 402–410.
-
(2013)
Microbiology
, vol.159
, pp. 402-410
-
-
Li, G.1
Young, K.D.2
-
52
-
-
84861978076
-
Host-gut microbiota metabolic interactions
-
52 Nicholson, J.K., Holmes, E., Kinross, J., Burcelin, R., Gibson, G., Jia, W., Pettersson, S., Host-gut microbiota metabolic interactions. Science 336 (2012), 1262–1267.
-
(2012)
Science
, vol.336
, pp. 1262-1267
-
-
Nicholson, J.K.1
Holmes, E.2
Kinross, J.3
Burcelin, R.4
Gibson, G.5
Jia, W.6
Pettersson, S.7
-
53
-
-
42049100344
-
Organelles in Blastocystis that blur the distinction between mitochondria and hydrogenosomes
-
53 Stechmann, A., Hamblin, K., Pérez-Brocal, V., Gaston, D., Richmond, G.S., van der Giezen, M., Clark, C.G., Roger, A.J., Organelles in Blastocystis that blur the distinction between mitochondria and hydrogenosomes. Curr. Biol. 18 (2008), 580–585.
-
(2008)
Curr. Biol.
, vol.18
, pp. 580-585
-
-
Stechmann, A.1
Hamblin, K.2
Pérez-Brocal, V.3
Gaston, D.4
Richmond, G.S.5
van der Giezen, M.6
Clark, C.G.7
Roger, A.J.8
-
54
-
-
84902190342
-
A SUF Fe-S cluster biogenesis system in the mitochondrion-related organelles of the anaerobic protist Pygsuia
-
54 Stairs, C.W., Eme, L., Brown, M.W., Mutsaers, C., Susko, E., Dellaire, G., Soanes, D.M., van der Giezen, M., Roger, A.J., A SUF Fe-S cluster biogenesis system in the mitochondrion-related organelles of the anaerobic protist Pygsuia. Curr. Biol. 24 (2014), 1176–1186.
-
(2014)
Curr. Biol.
, vol.24
, pp. 1176-1186
-
-
Stairs, C.W.1
Eme, L.2
Brown, M.W.3
Mutsaers, C.4
Susko, E.5
Dellaire, G.6
Soanes, D.M.7
van der Giezen, M.8
Roger, A.J.9
-
55
-
-
0016366135
-
Asparagine utilization in Escherichia coli
-
55 Willis, R.C., Woolfolk, C.A., Asparagine utilization in Escherichia coli. J. Bacteriol. 118 (1974), 231–241.
-
(1974)
J. Bacteriol.
, vol.118
, pp. 231-241
-
-
Willis, R.C.1
Woolfolk, C.A.2
-
56
-
-
45149111730
-
Amino acid-dependent growth of Campylobacter jejuni: key roles for aspartase (AspA) under microaerobic and oxygen-limited conditions and identification of AspB (Cj0762), essential for growth on glutamate
-
56 Guccione, E., Leon-Kempis, Mdel.R., Pearson, B.M., Hitchin, E., Mulholland, F., van Diemen, P.M., Stevens, M.P., Kelly, D.J., Amino acid-dependent growth of Campylobacter jejuni: key roles for aspartase (AspA) under microaerobic and oxygen-limited conditions and identification of AspB (Cj0762), essential for growth on glutamate. Mol. Microbiol. 69 (2008), 77–93.
-
(2008)
Mol. Microbiol.
, vol.69
, pp. 77-93
-
-
Guccione, E.1
Leon-Kempis, M.R.2
Pearson, B.M.3
Hitchin, E.4
Mulholland, F.5
van Diemen, P.M.6
Stevens, M.P.7
Kelly, D.J.8
-
57
-
-
0346881405
-
L-serine catabolism via an oxygen-labile L-serine dehydratase is essential for colonization of the avian gut by Campylobacter jejuni
-
57 Velayudhan, J., Jones, M.A., Barrow, P.A., Kelly, D.J., L-serine catabolism via an oxygen-labile L-serine dehydratase is essential for colonization of the avian gut by Campylobacter jejuni. Infect. Immun. 72 (2004), 260–268.
-
(2004)
Infect. Immun.
, vol.72
, pp. 260-268
-
-
Velayudhan, J.1
Jones, M.A.2
Barrow, P.A.3
Kelly, D.J.4
-
58
-
-
84871713337
-
Anaerobic energy metabolism in unicellular photosynthetic eukaryotes
-
58 Atteia, A., van Lis, R., Tielens, A.G.M., Martin, W.F., Anaerobic energy metabolism in unicellular photosynthetic eukaryotes. Biochim. Biophys. Acta 1827 (2013), 210–223.
-
(2013)
Biochim. Biophys. Acta
, vol.1827
, pp. 210-223
-
-
Atteia, A.1
van Lis, R.2
Tielens, A.G.M.3
Martin, W.F.4
-
59
-
-
44949255549
-
Structure and function of the virulence-associated high-temperature requirement A of Mycobacterium tuberculosis
-
59 Mohamedmohaideen, N.N., Palaninathan, S.K., Morin, P.M., Williams, B.J., Braunstein, M., Tichy, S.E., Locker, J., Russell, D.H., Jacobs, W.R. Jr., Sacchettini, J.C., Structure and function of the virulence-associated high-temperature requirement A of Mycobacterium tuberculosis. Biochemistry 47 (2008), 6092–6102.
-
(2008)
Biochemistry
, vol.47
, pp. 6092-6102
-
-
Mohamedmohaideen, N.N.1
Palaninathan, S.K.2
Morin, P.M.3
Williams, B.J.4
Braunstein, M.5
Tichy, S.E.6
Locker, J.7
Russell, D.H.8
Jacobs, W.R.9
Sacchettini, J.C.10
-
60
-
-
84858679239
-
Deciphering the magainin resistance process of Escherichia coli strains in light of the cytosolic proteome
-
60 Maria-Neto, S., Cândido, Ede.S., Rodrigues, D.R., de Sousa, D.A., da Silva, E.M., de Moraes, L.M.P., Otero-Gonzalez, Ade.J., Magalhães, B.S., Dias, S.C., Franco, O.L., Deciphering the magainin resistance process of Escherichia coli strains in light of the cytosolic proteome. Antimicrob. Agents Chemother. 56 (2012), 1714–1724.
-
(2012)
Antimicrob. Agents Chemother.
, vol.56
, pp. 1714-1724
-
-
Maria-Neto, S.1
Cândido, E.S.2
Rodrigues, D.R.3
de Sousa, D.A.4
da Silva, E.M.5
de Moraes, L.M.P.6
Otero-Gonzalez, A.J.7
Magalhães, B.S.8
Dias, S.C.9
Franco, O.L.10
-
61
-
-
84861234069
-
Representational difference analysis identifies specific genes in the interaction of Giardia duodenalis with the murine intestinal epithelial cell line, IEC-6
-
61 Ma'ayeh, S.Y., Brook-Carter, P.T., Representational difference analysis identifies specific genes in the interaction of Giardia duodenalis with the murine intestinal epithelial cell line, IEC-6. Int. J. Parasitol. 42 (2012), 501–509.
-
(2012)
Int. J. Parasitol.
, vol.42
, pp. 501-509
-
-
Ma'ayeh, S.Y.1
Brook-Carter, P.T.2
-
62
-
-
85015466442
-
Mycobacterial glycolipids: pathways to synthesis and role in virulence. PhD thesis
-
University of Birmingham
-
62 Sarkar, D., Mycobacterial glycolipids: pathways to synthesis and role in virulence. PhD thesis. 2012, University of Birmingham.
-
(2012)
-
-
Sarkar, D.1
-
63
-
-
33745634395
-
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
-
63 Li, W., Godzik, A., Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22 (2006), 1658–1659.
-
(2006)
Bioinformatics
, vol.22
, pp. 1658-1659
-
-
Li, W.1
Godzik, A.2
-
64
-
-
0037100671
-
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
-
64 Katoh, K., Misawa, K., Kuma, K., Miyata, T., MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30 (2002), 3059–3066.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
65
-
-
77954403053
-
BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments
-
65 Criscuolo, A., Gribaldo, S., BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments. BMC Evol. Biol., 10, 2010, 210.
-
(2010)
BMC Evol. Biol.
, vol.10
, pp. 210
-
-
Criscuolo, A.1
Gribaldo, S.2
-
66
-
-
84922362345
-
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies
-
66 Nguyen, L.-T., Schmidt, H.A., von Haeseler, A., Minh, B.Q., IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol. Biol. Evol. 32 (2015), 268–274.
-
(2015)
Mol. Biol. Evol.
, vol.32
, pp. 268-274
-
-
Nguyen, L.-T.1
Schmidt, H.A.2
von Haeseler, A.3
Minh, B.Q.4
-
67
-
-
84959528568
-
BlastKOALA and GhostKOALA: KEGG tools for functional characterization of genome and metagenome sequences
-
67 Kanehisa, M., Sato, Y., Morishima, K., BlastKOALA and GhostKOALA: KEGG tools for functional characterization of genome and metagenome sequences. J. Mol. Biol. 428 (2016), 726–731.
-
(2016)
J. Mol. Biol.
, vol.428
, pp. 726-731
-
-
Kanehisa, M.1
Sato, Y.2
Morishima, K.3
-
68
-
-
79959931985
-
HMMER web server: interactive sequence similarity searching
-
68 Finn, R.D., Clements, J., Eddy, S.R., HMMER web server: interactive sequence similarity searching. Nucleic Acids Res. 39 (2011), W29–W37.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. W29-W37
-
-
Finn, R.D.1
Clements, J.2
Eddy, S.R.3
-
69
-
-
84858077472
-
The Pfam protein families database
-
69 Punta, M., Coggill, P.C., Eberhardt, R.Y., Mistry, J., Tate, J., Boursnell, C., Pang, N., Forslund, K., Ceric, G., Clements, J., et al. The Pfam protein families database. Nucleic Acids Res. 40 (2012), D290–D301.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. D290-D301
-
-
Punta, M.1
Coggill, P.C.2
Eberhardt, R.Y.3
Mistry, J.4
Tate, J.5
Boursnell, C.6
Pang, N.7
Forslund, K.8
Ceric, G.9
Clements, J.10
-
70
-
-
76749100709
-
ETE: a python environment for tree exploration
-
70 Huerta-Cepas, J., Dopazo, J., Gabaldón, T., ETE: a python environment for tree exploration. BMC Bioinformatics, 11, 2010, 24.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 24
-
-
Huerta-Cepas, J.1
Dopazo, J.2
Gabaldón, T.3
-
71
-
-
0034697980
-
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
-
71 Emanuelsson, O., Nielsen, H., Brunak, S., von Heijne, G., Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J. Mol. Biol. 300 (2000), 1005–1016.
-
(2000)
J. Mol. Biol.
, vol.300
, pp. 1005-1016
-
-
Emanuelsson, O.1
Nielsen, H.2
Brunak, S.3
von Heijne, G.4
-
72
-
-
80053345905
-
SignalP 4.0: discriminating signal peptides from transmembrane regions
-
72 Petersen, T.N., Brunak, S., von Heijne, G., Nielsen, H., SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat. Methods 8 (2011), 785–786.
-
(2011)
Nat. Methods
, vol.8
, pp. 785-786
-
-
Petersen, T.N.1
Brunak, S.2
von Heijne, G.3
Nielsen, H.4
-
73
-
-
84926501050
-
MitoFates: improved prediction of mitochondrial targeting sequences and their cleavage sites
-
73 Fukasawa, Y., Tsuji, J., Fu, S.-C., Tomii, K., Horton, P., Imai, K., MitoFates: improved prediction of mitochondrial targeting sequences and their cleavage sites. Mol. Cell. Proteomics 14 (2015), 1113–1126.
-
(2015)
Mol. Cell. Proteomics
, vol.14
, pp. 1113-1126
-
-
Fukasawa, Y.1
Tsuji, J.2
Fu, S.-C.3
Tomii, K.4
Horton, P.5
Imai, K.6
|