-
1
-
-
0036668471
-
MBLR, a new RING finger protein resembling mammalian Polycomb gene products, is regulated by cell cycle-dependent phosphorylation
-
Akasaka, T., Takahashi, N., Suzuki, M., Koseki, H., Bodmer, R., Koga, H., MBLR, a new RING finger protein resembling mammalian Polycomb gene products, is regulated by cell cycle-dependent phosphorylation. Genes Cells 7 (2002), 835–850.
-
(2002)
Genes Cells
, vol.7
, pp. 835-850
-
-
Akasaka, T.1
Takahashi, N.2
Suzuki, M.3
Koseki, H.4
Bodmer, R.5
Koga, H.6
-
2
-
-
84905392053
-
H3K4me3 breadth is linked to cell identity and transcriptional consistency
-
Benayoun, B.A., Pollina, E.A., Ucar, D., Mahmoudi, S., Karra, K., Wong, E.D., Devarajan, K., Daugherty, A.C., Kundaje, A.B., Mancini, E., et al. H3K4me3 breadth is linked to cell identity and transcriptional consistency. Cell 158 (2014), 673–688.
-
(2014)
Cell
, vol.158
, pp. 673-688
-
-
Benayoun, B.A.1
Pollina, E.A.2
Ucar, D.3
Mahmoudi, S.4
Karra, K.5
Wong, E.D.6
Devarajan, K.7
Daugherty, A.C.8
Kundaje, A.B.9
Mancini, E.10
-
3
-
-
84888877924
-
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
-
Buenrostro, J.D., Giresi, P.G., Zaba, L.C., Chang, H.Y., Greenleaf, W.J., Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nat. Methods 10 (2013), 1213–1218.
-
(2013)
Nat. Methods
, vol.10
, pp. 1213-1218
-
-
Buenrostro, J.D.1
Giresi, P.G.2
Zaba, L.C.3
Chang, H.Y.4
Greenleaf, W.J.5
-
4
-
-
0035313447
-
Regulatory activity of autocrine IL-10 on dendritic cell functions
-
Corinti, S., Albanesi, C., la Sala, A., Pastore, S., Girolomoni, G., Regulatory activity of autocrine IL-10 on dendritic cell functions. J. Immunol. 166 (2001), 4312–4318.
-
(2001)
J. Immunol.
, vol.166
, pp. 4312-4318
-
-
Corinti, S.1
Albanesi, C.2
la Sala, A.3
Pastore, S.4
Girolomoni, G.5
-
5
-
-
84865761246
-
Modeling gene expression using chromatin features in various cellular contexts
-
Dong, X., Greven, M.C., Kundaje, A., Djebali, S., Brown, J.B., Cheng, C., Gingeras, T.R., Gerstein, M., Guigó, R., Birney, E., Weng, Z., Modeling gene expression using chromatin features in various cellular contexts. Genome Biol., 13, 2012, R53.
-
(2012)
Genome Biol.
, vol.13
, pp. R53
-
-
Dong, X.1
Greven, M.C.2
Kundaje, A.3
Djebali, S.4
Brown, J.B.5
Cheng, C.6
Gingeras, T.R.7
Gerstein, M.8
Guigó, R.9
Birney, E.10
Weng, Z.11
-
6
-
-
84896654124
-
TLR-driven early glycolytic reprogramming via the kinases TBK1-IKKε supports the anabolic demands of dendritic cell activation
-
Everts, B., Amiel, E., Huang, S.C.-C., Smith, A.M., Chang, C.-H., Lam, W.Y., Redmann, V., Freitas, T.C., Blagih, J., van der Windt, G.J.W., et al. TLR-driven early glycolytic reprogramming via the kinases TBK1-IKKε supports the anabolic demands of dendritic cell activation. Nat. Immunol. 15 (2014), 323–332.
-
(2014)
Nat. Immunol.
, vol.15
, pp. 323-332
-
-
Everts, B.1
Amiel, E.2
Huang, S.C.-C.3
Smith, A.M.4
Chang, C.-H.5
Lam, W.Y.6
Redmann, V.7
Freitas, T.C.8
Blagih, J.9
van der Windt, G.J.W.10
-
7
-
-
34250823515
-
Gene-specific control of inflammation by TLR-induced chromatin modifications
-
Foster, S.L., Hargreaves, D.C., Medzhitov, R., Gene-specific control of inflammation by TLR-induced chromatin modifications. Nature 447 (2007), 972–978.
-
(2007)
Nature
, vol.447
, pp. 972-978
-
-
Foster, S.L.1
Hargreaves, D.C.2
Medzhitov, R.3
-
8
-
-
84863011309
-
PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes
-
Gao, Z., Zhang, J., Bonasio, R., Strino, F., Sawai, A., Parisi, F., Kluger, Y., Reinberg, D., PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes. Mol. Cell 45 (2012), 344–356.
-
(2012)
Mol. Cell
, vol.45
, pp. 344-356
-
-
Gao, Z.1
Zhang, J.2
Bonasio, R.3
Strino, F.4
Sawai, A.5
Parisi, F.6
Kluger, Y.7
Reinberg, D.8
-
9
-
-
84875537655
-
Molecular control of steady-state dendritic cell maturation and immune homeostasis
-
Hammer, G.E., Ma, A., Molecular control of steady-state dendritic cell maturation and immune homeostasis. Annu. Rev. Immunol. 31 (2013), 743–791.
-
(2013)
Annu. Rev. Immunol.
, vol.31
, pp. 743-791
-
-
Hammer, G.E.1
Ma, A.2
-
10
-
-
84862794633
-
Global mapping of H3K4me3 and H3K27me3 reveals chromatin state-based regulation of human monocyte-derived dendritic cells in different environments
-
Huang, Y., Min, S., Lui, Y., Sun, J., Su, X., Liu, Y., Zhang, Y., Han, D., Che, Y., Zhao, C., et al. Global mapping of H3K4me3 and H3K27me3 reveals chromatin state-based regulation of human monocyte-derived dendritic cells in different environments. Genes Immun. 13 (2012), 311–320.
-
(2012)
Genes Immun.
, vol.13
, pp. 311-320
-
-
Huang, Y.1
Min, S.2
Lui, Y.3
Sun, J.4
Su, X.5
Liu, Y.6
Zhang, Y.7
Han, D.8
Che, Y.9
Zhao, C.10
-
11
-
-
84877335275
-
Molecular programming of steady-state dendritic cells: impact on autoimmunity and tumor immune surveillance
-
Johnson, D.J., Ohashi, P.S., Molecular programming of steady-state dendritic cells: impact on autoimmunity and tumor immune surveillance. Ann. N Y Acad. Sci. 1284 (2013), 46–51.
-
(2013)
Ann. N Y Acad. Sci.
, vol.1284
, pp. 46-51
-
-
Johnson, D.J.1
Ohashi, P.S.2
-
12
-
-
10344252794
-
Helminth antigens modulate TLR-initiated dendritic cell activation
-
Kane, C.M., Cervi, L., Sun, J., McKee, A.S., Masek, K.S., Shapira, S., Hunter, C.A., Pearce, E.J., Helminth antigens modulate TLR-initiated dendritic cell activation. J. Immunol. 173 (2004), 7454–7461.
-
(2004)
J. Immunol.
, vol.173
, pp. 7454-7461
-
-
Kane, C.M.1
Cervi, L.2
Sun, J.3
McKee, A.S.4
Masek, K.S.5
Shapira, S.6
Hunter, C.A.7
Pearce, E.J.8
-
13
-
-
50949094678
-
Th2 differentiation is unaffected by Jagged2 expression on dendritic cells
-
Krawczyk, C.M., Sun, J., Pearce, E.J., Th2 differentiation is unaffected by Jagged2 expression on dendritic cells. J. Immunol. 180 (2008), 7931–7937.
-
(2008)
J. Immunol.
, vol.180
, pp. 7931-7937
-
-
Krawczyk, C.M.1
Sun, J.2
Pearce, E.J.3
-
14
-
-
77954735369
-
Toll-like receptor-induced changes in glycolytic metabolism regulate dendritic cell activation
-
Krawczyk, C.M., Holowka, T., Sun, J., Blagih, J., Amiel, E., DeBerardinis, R.J., Cross, J.R., Jung, E., Thompson, C.B., Jones, R.G., Pearce, E.J., Toll-like receptor-induced changes in glycolytic metabolism regulate dendritic cell activation. Blood 115 (2010), 4742–4749.
-
(2010)
Blood
, vol.115
, pp. 4742-4749
-
-
Krawczyk, C.M.1
Holowka, T.2
Sun, J.3
Blagih, J.4
Amiel, E.5
DeBerardinis, R.J.6
Cross, J.R.7
Jung, E.8
Thompson, C.B.9
Jones, R.G.10
Pearce, E.J.11
-
15
-
-
84874763341
-
H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activation
-
Lauberth, S.M., Nakayama, T., Wu, X., Ferris, A.L., Tang, Z., Hughes, S.H., Roeder, R.G., H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activation. Cell 152 (2013), 1021–1036.
-
(2013)
Cell
, vol.152
, pp. 1021-1036
-
-
Lauberth, S.M.1
Nakayama, T.2
Wu, X.3
Ferris, A.L.4
Tang, Z.5
Hughes, S.H.6
Roeder, R.G.7
-
16
-
-
33847383585
-
Physical and functional association of a trimethyl H3K4 demethylase and Ring6a/MBLR, a polycomb-like protein
-
Lee, M.G., Norman, J., Shilatifard, A., Shiekhattar, R., Physical and functional association of a trimethyl H3K4 demethylase and Ring6a/MBLR, a polycomb-like protein. Cell 128 (2007), 877–887.
-
(2007)
Cell
, vol.128
, pp. 877-887
-
-
Lee, M.G.1
Norman, J.2
Shilatifard, A.3
Shiekhattar, R.4
-
17
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li, H., Durbin, R., Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25 (2009), 1754–1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
18
-
-
34247506378
-
Duration, combination and timing: the signal integration model of dendritic cell activation
-
Macagno, A., Napolitani, G., Lanzavecchia, A., Sallusto, F., Duration, combination and timing: the signal integration model of dendritic cell activation. Trends Immunol. 28 (2007), 227–233.
-
(2007)
Trends Immunol.
, vol.28
, pp. 227-233
-
-
Macagno, A.1
Napolitani, G.2
Lanzavecchia, A.3
Sallusto, F.4
-
19
-
-
65249164025
-
Multiple signaling pathways contribute to synergistic TLR ligand-dependent cytokine gene expression in human monocyte-derived macrophages and dendritic cells
-
Mäkelä, S.M., Strengell, M., Pietilä, T.E., Österlund, P., Julkunen, I., Multiple signaling pathways contribute to synergistic TLR ligand-dependent cytokine gene expression in human monocyte-derived macrophages and dendritic cells. J. Leukoc. Biol. 85 (2009), 664–672.
-
(2009)
J. Leukoc. Biol.
, vol.85
, pp. 664-672
-
-
Mäkelä, S.M.1
Strengell, M.2
Pietilä, T.E.3
Österlund, P.4
Julkunen, I.5
-
20
-
-
84945162427
-
Engagement of the aryl hydrocarbon receptor in mycobacterium tuberculosis-infected macrophages has pleiotropic effects on innate immune signaling
-
Memari, B., Bouttier, M., Dimitrov, V., Ouellette, M., Behr, M.A., Fritz, J.H., White, J.H., Engagement of the aryl hydrocarbon receptor in mycobacterium tuberculosis-infected macrophages has pleiotropic effects on innate immune signaling. J. Immunol. 195 (2015), 4479–4491.
-
(2015)
J. Immunol.
, vol.195
, pp. 4479-4491
-
-
Memari, B.1
Bouttier, M.2
Dimitrov, V.3
Ouellette, M.4
Behr, M.A.5
Fritz, J.H.6
White, J.H.7
-
21
-
-
66449088641
-
Pathogen recognition and inflammatory signaling in innate immune defenses
-
Mogensen, T.H., Pathogen recognition and inflammatory signaling in innate immune defenses. Clin. Microbiol. Rev. 22 (2009), 240–273.
-
(2009)
Clin. Microbiol. Rev.
, vol.22
, pp. 240-273
-
-
Mogensen, T.H.1
-
22
-
-
77649140924
-
Methylation of H3K4 Is required for inheritance of active transcriptional states
-
Muramoto, T., Müller, I., Thomas, G., Melvin, A., Chubb, J.R., Methylation of H3K4 Is required for inheritance of active transcriptional states. Curr. Biol. 20 (2010), 397–406.
-
(2010)
Curr. Biol.
, vol.20
, pp. 397-406
-
-
Muramoto, T.1
Müller, I.2
Thomas, G.3
Melvin, A.4
Chubb, J.R.5
-
23
-
-
84876991088
-
Balancing of histone H3K4 methylation states by the Kdm5c/SMCX histone demethylase modulates promoter and enhancer function
-
Outchkourov, N.S., Muiño, J.M., Kaufmann, K., van Ijcken, W.F., Groot Koerkamp, M.J., van Leenen, D., de Graaf, P., Holstege, F.C., Grosveld, F.G., Timmers, H.T., Balancing of histone H3K4 methylation states by the Kdm5c/SMCX histone demethylase modulates promoter and enhancer function. Cell Rep. 3 (2013), 1071–1079.
-
(2013)
Cell Rep.
, vol.3
, pp. 1071-1079
-
-
Outchkourov, N.S.1
Muiño, J.M.2
Kaufmann, K.3
van Ijcken, W.F.4
Groot Koerkamp, M.J.5
van Leenen, D.6
de Graaf, P.7
Holstege, F.C.8
Grosveld, F.G.9
Timmers, H.T.10
-
24
-
-
24144465745
-
Cloning of short hairpin RNAs for gene knockdown in mammalian cells
-
Paddison, P.J., Cleary, M., Silva, J.M., Chang, K., Sheth, N., Sachidanandam, R., Hannon, G.J., Cloning of short hairpin RNAs for gene knockdown in mammalian cells. Nat. Methods 1 (2004), 163–167.
-
(2004)
Nat. Methods
, vol.1
, pp. 163-167
-
-
Paddison, P.J.1
Cleary, M.2
Silva, J.M.3
Chang, K.4
Sheth, N.5
Sachidanandam, R.6
Hannon, G.J.7
-
25
-
-
33846019277
-
Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark
-
Ruthenburg, A.J., Allis, C.D., Wysocka, J., Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark. Mol. Cell 25 (2007), 15–30.
-
(2007)
Mol. Cell
, vol.25
, pp. 15-30
-
-
Ruthenburg, A.J.1
Allis, C.D.2
Wysocka, J.3
-
26
-
-
0029148878
-
Dendritic cells use macropinocytosis and the mannose receptor to concentrate macromolecules in the major histocompatibility complex class II compartment: downregulation by cytokines and bacterial products
-
Sallusto, F., Cella, M., Danieli, C., Lanzavecchia, A., Dendritic cells use macropinocytosis and the mannose receptor to concentrate macromolecules in the major histocompatibility complex class II compartment: downregulation by cytokines and bacterial products. J. Exp. Med. 182 (1995), 389–400.
-
(1995)
J. Exp. Med.
, vol.182
, pp. 389-400
-
-
Sallusto, F.1
Cella, M.2
Danieli, C.3
Lanzavecchia, A.4
-
27
-
-
33847084602
-
Genome regulation by polycomb and trithorax proteins
-
Schuettengruber, B., Chourrout, D., Vervoort, M., Leblanc, B., Cavalli, G., Genome regulation by polycomb and trithorax proteins. Cell 128 (2007), 735–745.
-
(2007)
Cell
, vol.128
, pp. 735-745
-
-
Schuettengruber, B.1
Chourrout, D.2
Vervoort, M.3
Leblanc, B.4
Cavalli, G.5
-
28
-
-
84921366032
-
Knockdown of polycomb-group RING finger 6 modulates mouse male germ cell differentiation in vitro
-
Sun, J., Wang, J., He, L., Lin, Y., Wu, J., Knockdown of polycomb-group RING finger 6 modulates mouse male germ cell differentiation in vitro. Cell. Physiol. Biochem. 35 (2015), 339–352.
-
(2015)
Cell. Physiol. Biochem.
, vol.35
, pp. 339-352
-
-
Sun, J.1
Wang, J.2
He, L.3
Lin, Y.4
Wu, J.5
-
29
-
-
41349119386
-
Epigenetic regulation of dendritic cell–derived interleukin-12 facilitates immunosuppression after a severe innate immune response
-
Wen, H., Dou, Y., Hogaboam, C.M., Kunkel, S.L., Epigenetic regulation of dendritic cell–derived interleukin-12 facilitates immunosuppression after a severe innate immune response. Blood 111 (2008), 1797–1804.
-
(2008)
Blood
, vol.111
, pp. 1797-1804
-
-
Wen, H.1
Dou, Y.2
Hogaboam, C.M.3
Kunkel, S.L.4
-
30
-
-
43349088279
-
Dendritic cells at the interface of innate and acquired immunity: the role for epigenetic changes
-
Wen, H., Schaller, M.A., Dou, Y., Hogaboam, C.M., Kunkel, S.L., Dendritic cells at the interface of innate and acquired immunity: the role for epigenetic changes. J. Leukoc. Biol. 83 (2008), 439–446.
-
(2008)
J. Leukoc. Biol.
, vol.83
, pp. 439-446
-
-
Wen, H.1
Schaller, M.A.2
Dou, Y.3
Hogaboam, C.M.4
Kunkel, S.L.5
-
31
-
-
84911924274
-
Hrd1-mediated BLIMP-1 ubiquitination promotes dendritic cell MHCII expression for CD4 T cell priming during inflammation
-
Yang, H., Qiu, Q., Gao, B., Kong, S., Lin, Z., Fang, D., Hrd1-mediated BLIMP-1 ubiquitination promotes dendritic cell MHCII expression for CD4 T cell priming during inflammation. J. Exp. Med. 211 (2014), 2467–2479.
-
(2014)
J. Exp. Med.
, vol.211
, pp. 2467-2479
-
-
Yang, H.1
Qiu, Q.2
Gao, B.3
Kong, S.4
Lin, Z.5
Fang, D.6
-
32
-
-
84973352511
-
Polycomb group protein Pcgf6 acts as a master regulator to maintain embryonic stem cell identity
-
Yang, C.-S., Chang, K.-Y., Dang, J., Rana, T.M., Polycomb group protein Pcgf6 acts as a master regulator to maintain embryonic stem cell identity. Sci. Rep., 6, 2016, 26899.
-
(2016)
Sci. Rep.
, vol.6
, pp. 26899
-
-
Yang, C.-S.1
Chang, K.-Y.2
Dang, J.3
Rana, T.M.4
-
33
-
-
0031474271
-
Induction of interleukin-12 p40 transcript by CD40 ligation via activation of nuclear factor-kappaB
-
Yoshimoto, T., Nagase, H., Ishida, T., Inoue, J., Nariuchi, H., Induction of interleukin-12 p40 transcript by CD40 ligation via activation of nuclear factor-kappaB. Eur. J. Immunol. 27 (1997), 3461–3470.
-
(1997)
Eur. J. Immunol.
, vol.27
, pp. 3461-3470
-
-
Yoshimoto, T.1
Nagase, H.2
Ishida, T.3
Inoue, J.4
Nariuchi, H.5
-
34
-
-
84942833323
-
NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation
-
Yu, H.-B., Yurieva, M., Balachander, A., Foo, I., Leong, X., Zelante, T., Zolezzi, F., Poidinger, M., Ricciardi-Castagnoli, P., NFATc2 mediates epigenetic modification of dendritic cell cytokine and chemokine responses to dectin-1 stimulation. Nucleic Acids Res. 43 (2015), 836–847.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. 836-847
-
-
Yu, H.-B.1
Yurieva, M.2
Balachander, A.3
Foo, I.4
Leong, X.5
Zelante, T.6
Zolezzi, F.7
Poidinger, M.8
Ricciardi-Castagnoli, P.9
-
35
-
-
84912138871
-
Pcgf6, a polycomb group protein, regulates mesodermal lineage differentiation in murine ESCs and functions in iPS reprogramming
-
Zdzieblo, D., Li, X., Lin, Q., Zenke, M., Illich, D.J., Becker, M., Müller, A.M., Pcgf6, a polycomb group protein, regulates mesodermal lineage differentiation in murine ESCs and functions in iPS reprogramming. Stem Cells 32 (2014), 3112–3125.
-
(2014)
Stem Cells
, vol.32
, pp. 3112-3125
-
-
Zdzieblo, D.1
Li, X.2
Lin, Q.3
Zenke, M.4
Illich, D.J.5
Becker, M.6
Müller, A.M.7
-
36
-
-
53849146020
-
Model-based analysis of ChIP-seq (MACS)
-
Zhang, Y., Liu, T., Meyer, C.A., Eeckhoute, J., Johnson, D.S., Bernstein, B.E., Nusbaum, C., Myers, R.M., Brown, M., Li, W., Liu, X.S., Model-based analysis of ChIP-seq (MACS). Genome Biol., 9, 2008, R137.
-
(2008)
Genome Biol.
, vol.9
, pp. R137
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
Nusbaum, C.7
Myers, R.M.8
Brown, M.9
Li, W.10
Liu, X.S.11
|