-
1
-
-
84928829844
-
Branching out: Towards a trait-based understanding of fungal ecology
-
Aguilar-Trigueros CA, Hempel S, Powell JR, Anderson IC, Antonovics J, Bergmann J et al. (2015). Branching out: towards a trait-based understanding of fungal ecology. Fungal Biol Rev 29: 34-41.
-
(2015)
Fungal Biol Rev
, vol.29
, pp. 34-41
-
-
Aguilar-Trigueros, C.A.1
Hempel, S.2
Powell, J.R.3
Anderson, I.C.4
Antonovics, J.5
Bergmann, J.6
-
2
-
-
84903631579
-
Ecological understanding of rootinfecting fungi using trait-based approaches
-
Aguilar-Trigueros CA, Powell JR, Anderson IC, Antonovics J, Rillig MC. (2014). Ecological understanding of rootinfecting fungi using trait-based approaches. Trends Plant Sci 19: 432-438.
-
(2014)
Trends Plant Sci
, vol.19
, pp. 432-438
-
-
Aguilar-Trigueros, C.A.1
Powell, J.R.2
Anderson, I.C.3
Antonovics, J.4
Rillig, M.C.5
-
3
-
-
84960432712
-
Morphology, phylogeny, and taxonomy of Microthlaspi (Brassicaceae: Coluteocarpeae) and related genera
-
Ali T, Schmuker A, Runge F, Solovyeva I, Nigrelli L, Paule J et al. (2016). Morphology, phylogeny, and taxonomy of Microthlaspi (Brassicaceae: Coluteocarpeae) and related genera. Taxon 65: 79-98.
-
(2016)
Taxon
, vol.65
, pp. 79-98
-
-
Ali, T.1
Schmuker, A.2
Runge, F.3
Solovyeva, I.4
Nigrelli, L.5
Paule, J.6
-
4
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W et al. (1997). Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
-
5
-
-
84899756915
-
Novel symbiotic protoplasts formed by endophytic fungi explain their hidden existence, lifestyle switching, and diversity within the plant kingdom
-
Atsatt PR, Whiteside MD. (2014). Novel symbiotic protoplasts formed by endophytic fungi explain their hidden existence, lifestyle switching, and diversity within the plant kingdom. PLoS One 9: e95266.
-
(2014)
PLoS One
, vol.9
, pp. e95266
-
-
Atsatt, P.R.1
Whiteside, M.D.2
-
6
-
-
84942896155
-
Colonization of root cells and plant growth promotion by Piriformospora indica occurs independently of plant common symbiosis genes
-
Banhara A, Ding Y, Kühner R, Zuccaro A, Parniske M. (2015). Colonization of root cells and plant growth promotion by Piriformospora indica occurs independently of plant common symbiosis genes. Front Plant Sci 6: 667.
-
(2015)
Front Plant Sci
, vol.6
, pp. 667
-
-
Banhara, A.1
Ding, Y.2
Kühner, R.3
Zuccaro, A.4
Parniske, M.5
-
7
-
-
84856336915
-
Molecular and phenotypic characterization of Sebacina vermifera strains associated with orchids, and the description of Piriformospora williamsii sp. nov
-
Basiewicz M, Weiß M, Kogel K-H, Langen G, Zorn H, Zuccaro A. (2012). Molecular and phenotypic characterization of Sebacina vermifera strains associated with orchids, and the description of Piriformospora williamsii sp. nov. Fungal Biol 116: 204-213.
-
(2012)
Fungal Biol
, vol.116
, pp. 204-213
-
-
Basiewicz, M.1
Weiß, M.2
Kogel, K.-H.3
Langen, G.4
Zorn, H.5
Zuccaro, A.6
-
8
-
-
84862599581
-
Endophytic insect-parasitic fungi translocate nitrogen directly from insects to plants
-
Behie SW, Zelisko PM, Bidochka MJ. (2012). Endophytic insect-parasitic fungi translocate nitrogen directly from insects to plants. Science 336: 1576-1577.
-
(2012)
Science
, vol.336
, pp. 1576-1577
-
-
Behie, S.W.1
Zelisko, P.M.2
Bidochka, M.J.3
-
9
-
-
77954658843
-
Rooting theories of plant community ecology in microbial interactions
-
Bever JD, Dickie IA, Facelli E, Facelli JM, Klironomos J, Moora M et al. (2010). Rooting theories of plant community ecology in microbial interactions. Trends Ecol Evol 25: 468-478.
-
(2010)
Trends Ecol Evol
, vol.25
, pp. 468-478
-
-
Bever, J.D.1
Dickie, I.A.2
Facelli, E.3
Facelli, J.M.4
Klironomos, J.5
Moora, M.6
-
10
-
-
84872242032
-
Microbial population and community dynamics on plant roots and their feedbacks on plant communities
-
Bever JD, Platt TG, Morton ER. (2012). Microbial population and community dynamics on plant roots and their feedbacks on plant communities. Annu Rev Microbiol 66: 265-283.
-
(2012)
Annu Rev Microbiol
, vol.66
, pp. 265-283
-
-
Bever, J.D.1
Platt, T.G.2
Morton, E.R.3
-
11
-
-
0038325772
-
Testing for phylogenetic signal in comparative data: Behavioral traits are more labile
-
Blomberg SP, Garland T, Ives AR. (2003). Testing for phylogenetic signal in comparative data: behavioral traits are more labile. Evolution 57: 717-745.
-
(2003)
Evolution
, vol.57
, pp. 717-745
-
-
Blomberg, S.P.1
Garland, T.2
Ives, A.R.3
-
12
-
-
0001586513
-
Utilization of major substrates by dark-septate, root endophytes
-
Caldwell BA, Jumpponen A, Trappe JM. (2000). Utilization of major substrates by dark-septate, root endophytes. Mycologia 92: 230-232.
-
(2000)
Mycologia
, vol.92
, pp. 230-232
-
-
Caldwell, B.A.1
Jumpponen, A.2
Trappe, J.M.3
-
13
-
-
84908093804
-
Metabolic flexibility as a major predictor of spatial distribution in microbial communities
-
Carbonero F, Oakley BB, Purdy KJ. (2014). Metabolic flexibility as a major predictor of spatial distribution in microbial communities. PLoS One 9: e85105.
-
(2014)
PLoS One
, vol.9
, pp. e85105
-
-
Carbonero, F.1
Oakley, B.B.2
Purdy, K.J.3
-
14
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17: 540-552.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
16
-
-
84942980565
-
Diversity of exophillic acid derivatives in strains of an endophytic Exophiala sp
-
Cheikh-Ali Z, Glynou K, Ali T, Ploch S, Kaiser M, Thines M et al. (2015). Diversity of exophillic acid derivatives in strains of an endophytic Exophiala sp. Phytochemistry 118: 83-93.
-
(2015)
Phytochemistry
, vol.118
, pp. 83-93
-
-
Cheikh-Ali, Z.1
Glynou, K.2
Ali, T.3
Ploch, S.4
Kaiser, M.5
Thines, M.6
-
18
-
-
84955182243
-
Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
-
Coleman-Derr D, Desgarennes D, Fonseca-Garcia C, Gross S, Clingenpeel S, Woyke T et al. (2016). Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species. New Phytol 209: 798-811.
-
(2016)
New Phytol
, vol.209
, pp. 798-811
-
-
Coleman-Derr, D.1
Desgarennes, D.2
Fonseca-Garcia, C.3
Gross, S.4
Clingenpeel, S.5
Woyke, T.6
-
19
-
-
0345094916
-
Quantifying phylogenetically structured environmental variation
-
Desdevises Y, Legendre P, Azouzi L, Morand S. (2003). Quantifying phylogenetically structured environmental variation. Evolution 57: 2647-2652.
-
(2003)
Evolution
, vol.57
, pp. 2647-2652
-
-
Desdevises, Y.1
Legendre, P.2
Azouzi, L.3
Morand, S.4
-
20
-
-
0035114890
-
Definition of tissuespecific and general requirements for plant infection in a phytopathogenic fungus
-
Dufresne M, Osbourn AE. (2001). Definition of tissuespecific and general requirements for plant infection in a phytopathogenic fungus. Mol Plant Microbe Interact 14: 300-307.
-
(2001)
Mol Plant Microbe Interact
, vol.14
, pp. 300-307
-
-
Dufresne, M.1
Osbourn, A.E.2
-
21
-
-
0027580147
-
ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts
-
Gardes M, Bruns TD. (1993). ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2: 113-118.
-
(1993)
Mol Ecol
, vol.2
, pp. 113-118
-
-
Gardes, M.1
Bruns, T.D.2
-
22
-
-
84983348675
-
The local environment determines the assembly of root endophytic fungi at a continental scale
-
Glynou K, Ali T, Buch A-K, Haghi Kia S, Ploch S, Xia X et al. (2016). The local environment determines the assembly of root endophytic fungi at a continental scale. Environ Microbiol 18: 2418-2434.
-
(2016)
Environ Microbiol
, vol.18
, pp. 2418-2434
-
-
Glynou, K.1
Ali, T.2
Buch, A.-K.3
Haghi Kia, S.4
Ploch, S.5
Xia, X.6
-
23
-
-
33751001957
-
Isolation procedures for endophytic microorganisms
-
Schulz BJE, Boyle CJC, Sieber TN(eds). Springer Berlin: Heidelberg, Germany
-
Hallmann J, Berg G, Schulz B. (2006) Isolation procedures for endophytic microorganisms. In: Schulz BJE, Boyle CJC, Sieber TN(eds). Microbial Root Endophytes, Soil Biology. Springer Berlin: Heidelberg, Germany, 299-319.
-
(2006)
Microbial Root Endophytes, Soil Biology
, pp. 299-319
-
-
Hallmann, J.1
Berg, G.2
Schulz, B.3
-
24
-
-
84961196851
-
Root endophyte Colletotrichum tofieldiae confers plant fitness benefits that are phosphate status dependent
-
Hiruma K, Gerlach N, Sacristán S, Nakano RT, Hacquard S, Kracher B et al. (2016). Root endophyte Colletotrichum tofieldiae confers plant fitness benefits that are phosphate status dependent. Cell 165: 464-474.
-
(2016)
Cell
, vol.165
, pp. 464-474
-
-
Hiruma, K.1
Gerlach, N.2
Sacristán, S.3
Nakano, R.T.4
Hacquard, S.5
Kracher, B.6
-
25
-
-
34247546519
-
Geographic structure in a widespread plant-mycorrhizal interaction: Pines and false truffles
-
Hoeksema JD, Thompson JN. (2007). Geographic structure in a widespread plant-mycorrhizal interaction: pines and false truffles. J Evol Biol 20: 1148-1163.
-
(2007)
J Evol Biol
, vol.20
, pp. 1148-1163
-
-
Hoeksema, J.D.1
Thompson, J.N.2
-
26
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F. (2001). MRBAYES: bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
27
-
-
34447280382
-
Within-species variation and measurement error in phylogenetic comparative methods
-
Ives AR, Midford PE, Garland T. (2007). Within-species variation and measurement error in phylogenetic comparative methods. Sys Biol 56: 252-270.
-
(2007)
Sys Biol
, vol.56
, pp. 252-270
-
-
Ives, A.R.1
Midford, P.E.2
Garland, T.3
-
28
-
-
84892170118
-
Cellulase activity screening using pure carboxymethylcellulose: Application to soluble cellulolytic samples and to plant tissue prints
-
Johnsen HR, Krause K. (2014). Cellulase activity screening using pure carboxymethylcellulose: application to soluble cellulolytic samples and to plant tissue prints. Int J Mol Sci 15: 830-838.
-
(2014)
Int J Mol Sci
, vol.15
, pp. 830-838
-
-
Johnsen, H.R.1
Krause, K.2
-
29
-
-
0031786145
-
Dark septate endophytes: A review of facultative biotrophic rootcolonizing fungi
-
Jumpponen A, Trappe JM. (1998). Dark septate endophytes: A review of facultative biotrophic rootcolonizing fungi. New Phytol 140: 295-310.
-
(1998)
New Phytol
, vol.140
, pp. 295-310
-
-
Jumpponen, A.1
Trappe, J.M.2
-
30
-
-
84875619226
-
MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
-
Katoh K, Standley DM. (2013). MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30: 772-780.
-
(2013)
Mol Biol Evol
, vol.30
, pp. 772-780
-
-
Katoh, K.1
Standley, D.M.2
-
31
-
-
84902675076
-
Root-associated fungi of Arabidopsis thaliana and Microthlaspi perfoliatum
-
Keim J, Mishra B, Sharma R, Ploch S, Thines M. (2014). Root-associated fungi of Arabidopsis thaliana and Microthlaspi perfoliatum. Fungal Divers 66: 99-111.
-
(2014)
Fungal Divers
, vol.66
, pp. 99-111
-
-
Keim, J.1
Mishra, B.2
Sharma, R.3
Ploch, S.4
Thines, M.5
-
32
-
-
0345447510
-
Variation in plant response to native and exotic arbuscular mycorrhizal fungi
-
Klironomos JN. (2003). Variation in plant response to native and exotic arbuscular mycorrhizal fungi. Ecology 84: 2292-2301.
-
(2003)
Ecology
, vol.84
, pp. 2292-2301
-
-
Klironomos, J.N.1
-
33
-
-
84886099720
-
Towards a unified paradigm for sequence-based identification of fungi
-
Kõljalg U, Nilsson RH, Abarenkov K, Tedersoo L, Taylor AFS, Bahram M et al. (2013). Towards a unified paradigm for sequence-based identification of fungi. Mol Ecol 22: 5271-5277.
-
(2013)
Mol Ecol
, vol.22
, pp. 5271-5277
-
-
Kõljalg, U.1
Nilsson, R.H.2
Abarenkov, K.3
Tedersoo, L.4
Taylor, A.F.S.5
Bahram, M.6
-
34
-
-
84857665368
-
The dark side is not fastidious-dark septate endophytic fungi of native and invasive plants of semiarid sandy areas
-
Knapp DG, Pintye A, Kovács GM. (2012). The dark side is not fastidious-dark septate endophytic fungi of native and invasive plants of semiarid sandy areas. PLoS One 7: e32570.
-
(2012)
PLoS One
, vol.7
, pp. e32570
-
-
Knapp, D.G.1
Pintye, A.2
Kovács, G.M.3
-
35
-
-
84936187728
-
Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity
-
Lahrmann U, Strehmel N, Langen G, Frerigmann H, Leson L, Ding Y et al. (2015). Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity. New Phytol 207: 841-857.
-
(2015)
New Phytol
, vol.207
, pp. 841-857
-
-
Lahrmann, U.1
Strehmel, N.2
Langen, G.3
Frerigmann, H.4
Leson, L.5
Ding, Y.6
-
37
-
-
84866728878
-
Fungal assemblages associated with roots of halophytic and non-halophytic plant species vary differentially along a salinity gradient
-
Maciá-Vicente JG, Ferraro V, Burruano S, Lopez-Llorca LV. (2012). Fungal assemblages associated with roots of halophytic and non-halophytic plant species vary differentially along a salinity gradient. Microb Ecol 64: 668-679.
-
(2012)
Microb Ecol
, vol.64
, pp. 668-679
-
-
Maciá-Vicente, J.G.1
Ferraro, V.2
Burruano, S.3
Lopez-Llorca, L.V.4
-
38
-
-
40549116046
-
Fungal root endophytes from natural vegetation in Mediterranean environments with special reference to Fusarium spp
-
Maciá-Vicente JG, Jansson H-B, Abdullah SK, Descals E, Salinas J, Lopez-Llorca LV. (2008a). Fungal root endophytes from natural vegetation in Mediterranean environments with special reference to Fusarium spp. FEMS Microbiol Ecol 64: 90-105.
-
(2008)
FEMS Microbiol Ecol
, vol.64
, pp. 90-105
-
-
Maciá-Vicente, J.G.1
Jansson, H.-B.2
Abdullah, S.K.3
Descals, E.4
Salinas, J.5
Lopez-Llorca, L.V.6
-
39
-
-
49449089137
-
Colonization of barley roots by endophytic fungi and their reduction of take-all caused by Gaeumannomyces graminis var tritici
-
Maciá-Vicente JG, Jansson H-B, Mendgen K, Lopez-Llorca LV. (2008b). Colonization of barley roots by endophytic fungi and their reduction of take-all caused by Gaeumannomyces graminis var. tritici. Can J Microbiol 54: 600-609.
-
(2008)
Can J Microbiol
, vol.54
, pp. 600-609
-
-
Maciá-Vicente, J.G.1
Jansson, H.-B.2
Mendgen, K.3
Lopez-Llorca, L.V.4
-
40
-
-
61649093336
-
Real-time PCR quantification and live-cell imaging of endophytic colonization of barley (Hordeum vulgare) roots by Fusarium equiseti and Pochonia chlamydosporia
-
Maciá-Vicente JG, Jansson H-B, Talbot NJ, Lopez-Llorca LV. (2009a). Real-time PCR quantification and live-cell imaging of endophytic colonization of barley (Hordeum vulgare) roots by Fusarium equiseti and Pochonia chlamydosporia. New Phytol 182: 213-228.
-
(2009)
New Phytol
, vol.182
, pp. 213-228
-
-
Maciá-Vicente, J.G.1
Jansson, H.-B.2
Talbot, N.J.3
Lopez-Llorca, L.V.4
-
41
-
-
73149119588
-
Colonisation of barley roots by endophytic Fusarium equiseti and Pochonia chlamydosporia: Effects on plant growth and disease
-
Maciá-Vicente JG, Rosso LC, Ciancio A, Jansson H-B, Lopez-Llorca LV. (2009b). Colonisation of barley roots by endophytic Fusarium equiseti and Pochonia chlamydosporia: effects on plant growth and disease. Ann Appl Biol 155: 391-401.
-
(2009)
Ann Appl Biol
, vol.155
, pp. 391-401
-
-
Maciá-Vicente, J.G.1
Rosso, L.C.2
Ciancio, A.3
Jansson, H.-B.4
Lopez-Llorca, L.V.5
-
42
-
-
34250893026
-
Influence of phylogeny on fungal community assembly and ecosystem functioning
-
Maherali H, Klironomos JN. (2007). Influence of phylogeny on fungal community assembly and ecosystem functioning. Science 316: 1746-1748.
-
(2007)
Science
, vol.316
, pp. 1746-1748
-
-
Maherali, H.1
Klironomos, J.N.2
-
43
-
-
84860998529
-
Phylogenetic and traitbased assembly of arbuscular mycorrhizal fungal communities
-
Maherali H, Klironomos JN. (2012). Phylogenetic and traitbased assembly of arbuscular mycorrhizal fungal communities. PLoS One 7: e36695.
-
(2012)
PLoS One
, vol.7
, pp. e36695
-
-
Maherali, H.1
Klironomos, J.N.2
-
44
-
-
77949714038
-
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
-
Ma L-J, van der Does HC, Borkovich KA, Coleman JJ, Daboussi M-J, Di Pietro A et al. (2010). Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature 464: 367-373.
-
(2010)
Nature
, vol.464
, pp. 367-373
-
-
Ma, L.-J.1
Van Der Does, H.C.2
Borkovich, K.A.3
Coleman, J.J.4
Daboussi, M.-J.5
Di Pietro, A.6
-
45
-
-
30344432098
-
Seeking the elusive function of the root-colonising dark septate endophytic fungi
-
Mandyam K, Jumpponen A. (2005). Seeking the elusive function of the root-colonising dark septate endophytic fungi. Stud Mycol 53: 173-189.
-
(2005)
Stud Mycol
, vol.53
, pp. 173-189
-
-
Mandyam, K.1
Jumpponen, A.2
-
46
-
-
84919911061
-
Unraveling the dark septate endophyte functions: Insights from the Arabidopsis model
-
Verma VC, Gange AC (eds). Springer: India
-
Mandyam K, Jumpponen A. (2014), Unraveling the dark septate endophyte functions: insights from the Arabidopsis model. In: Verma VC, Gange AC (eds), Advances in Endophytic Research. Springer: India, 115-141.
-
(2014)
Advances in Endophytic Research
, pp. 115-141
-
-
Mandyam, K.1
Jumpponen, A.2
-
47
-
-
84920640251
-
Mutualism-parasitism paradigm synthesized from results of rootendophyte models
-
Mandyam K, Jumpponen A. (2015). Mutualism-parasitism paradigm synthesized from results of rootendophyte models. Front Microbiol 5: 776.
-
(2015)
Front Microbiol
, vol.5
, pp. 776
-
-
Mandyam, K.1
Jumpponen, A.2
-
48
-
-
77955897583
-
Isolation and morphological and metabolic characterization of common endophytes in annually burned tallgrass prairie
-
Mandyam K, Loughin T, Jumpponen A. (2010). Isolation and morphological and metabolic characterization of common endophytes in annually burned tallgrass prairie. Mycologia 102: 813-821.
-
(2010)
Mycologia
, vol.102
, pp. 813-821
-
-
Mandyam, K.1
Loughin, T.2
Jumpponen, A.3
-
49
-
-
77955482941
-
Negative plant-soil feedback predicts tree-species relative abundance in a tropical forest
-
Mangan SA, Schnitzer SA, Herre EA, Mack KML, Valencia MC, Sanchez EI et al. (2010). Negative plant-soil feedback predicts tree-species relative abundance in a tropical forest. Nature 466: 752-755.
-
(2010)
Nature
, vol.466
, pp. 752-755
-
-
Mangan, S.A.1
Schnitzer, S.A.2
Herre, E.A.3
Mack, K.M.L.4
Valencia, M.C.5
Sanchez, E.I.6
-
50
-
-
84873135899
-
The effects of fungal root endophytes on plant growth: A meta-analysis
-
Mayerhofer MS, Kernaghan G, Harper KA. (2012). The effects of fungal root endophytes on plant growth: A meta-analysis. Mycorrhiza 23: 119-128.
-
(2012)
Mycorrhiza
, vol.23
, pp. 119-128
-
-
Mayerhofer, M.S.1
Kernaghan, G.2
Harper, K.A.3
-
51
-
-
12844254898
-
A brief history of seed size
-
Moles AT, Ackerly DD, Webb CO, Tweddle JC, Dickie JB, Westoby M. (2005). A brief history of seed size. Science 307: 576-580.
-
(2005)
Science
, vol.307
, pp. 576-580
-
-
Moles, A.T.1
Ackerly, D.D.2
Webb, C.O.3
Tweddle, J.C.4
Dickie, J.B.5
Westoby, M.6
-
52
-
-
84982358134
-
A revised medium for rapid growth and bio assays with tobacco tissue cultures
-
Murashige T, Skoog F. (1962). A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol Plant 15: 473-497.
-
(1962)
Physiol Plant
, vol.15
, pp. 473-497
-
-
Murashige, T.1
Skoog, F.2
-
53
-
-
79954847219
-
A meta-analysis of plant responses to dark septate root endophytes
-
Newsham KK. (2011). A meta-analysis of plant responses to dark septate root endophytes. New Phytol 190: 783-793.
-
(2011)
New Phytol
, vol.190
, pp. 783-793
-
-
Newsham, K.K.1
-
54
-
-
84971463552
-
-
Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, O'Hara RB et al. (2015). vegan: Community Ecology Package. Available from http://CRAN.R-project.org/package=vegan.
-
(2015)
Vegan: Community Ecology Package
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
Minchin, P.R.5
O'Hara, R.B.6
-
55
-
-
84860006284
-
-
Orme D, Freckleton R, Thomas G, Petzoldt T, Fritz S, Isaac N. (2011). caper: Comparative Analyses of Phylogenetics and Evolution in R. Available from http://CRAN.Rproject.org/package=caper.
-
(2011)
Caper: Comparative Analyses of Phylogenetics and Evolution in R.
-
-
Orme, D.1
Freckleton, R.2
Thomas, G.3
Petzoldt, T.4
Fritz, S.5
Isaac, N.6
-
56
-
-
0033613376
-
Inferring the historical patterns of biological evolution
-
Pagel M. (1999). Inferring the historical patterns of biological evolution. Nature 401: 877-884.
-
(1999)
Nature
, vol.401
, pp. 877-884
-
-
Pagel, M.1
-
57
-
-
44849088442
-
Associations between microfungal endophytes and roots: Do structural features indicate function?
-
Peterson RL, Wagg C, Pautler M. (2008). Associations between microfungal endophytes and roots: do structural features indicate function? Botany 86: 445-456.
-
(2008)
Botany
, vol.86
, pp. 445-456
-
-
Peterson, R.L.1
Wagg, C.2
Pautler, M.3
-
58
-
-
45949083699
-
Interactions of biotic and abiotic environmental factors in an ectomycorrhizal symbiosis, and the potential for selection mosaics
-
Piculell BJ, Hoeksema JD, Thompson JN. (2008). Interactions of biotic and abiotic environmental factors in an ectomycorrhizal symbiosis, and the potential for selection mosaics. BMC Biol 6: 23.
-
(2008)
BMC Biol
, vol.6
, pp. 23
-
-
Piculell, B.J.1
Hoeksema, J.D.2
Thompson, J.N.3
-
59
-
-
72849127190
-
Phylogenetic trait conservatism and the evolution of functional trade-offs in arbuscular mycorrhizal fungi
-
Powell JR, Parrent JL, Hart MM, Klironomos JN, Rillig MC, Maherali H. (2009). Phylogenetic trait conservatism and the evolution of functional trade-offs in arbuscular mycorrhizal fungi. Proc R Soc Lond B Biol Sci 276: 4237-4245.
-
(2009)
Proc R Soc Lond B Biol Sci
, vol.276
, pp. 4237-4245
-
-
Powell, J.R.1
Parrent, J.L.2
Hart, M.M.3
Klironomos, J.N.4
Rillig, M.C.5
Maherali, H.6
-
60
-
-
84973418649
-
-
R Core Team, R Foundation for Statistical Computing: Vienna, Austria
-
R Core Team (2013). R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing: Vienna, Austria.
-
(2013)
R: A Language and Environment for Statistical Computing
-
-
-
61
-
-
0033493591
-
Phylogenetic analysis of a dataset of fungal 5.8 S rDNA sequences shows that highly divergent copies of internal transcribed spacers reported from Scutellospora castanea are of ascomycete origin
-
Redecker D, Hijri M, Dulieu H, Sanders IR. (1999). Phylogenetic analysis of a dataset of fungal 5.8 S rDNA sequences shows that highly divergent copies of internal transcribed spacers reported from Scutellospora castanea are of ascomycete origin. Fungal Genet Biol 28: 238-244.
-
(1999)
Fungal Genet Biol
, vol.28
, pp. 238-244
-
-
Redecker, D.1
Hijri, M.2
Dulieu, H.3
Sanders, I.R.4
-
62
-
-
84867364321
-
Phytools: An R package for phylogenetic comparative biology (and other things)
-
Revell LJ. (2011). phytools: an R package for phylogenetic comparative biology (and other things). Methods Ecol Evol 3: 217-223.
-
(2011)
Methods Ecol Evol
, vol.3
, pp. 217-223
-
-
Revell, L.J.1
-
63
-
-
42049105960
-
Stress tolerance in plants via habitat-adapted symbiosis
-
Rodriguez RJ, Henson J, Van Volkenburgh E, Hoy M, Wright L, Beckwith F et al. (2008). Stress tolerance in plants via habitat-adapted symbiosis. ISME J 2: 404-416.
-
(2008)
ISME J
, vol.2
, pp. 404-416
-
-
Rodriguez, R.J.1
Henson, J.2
Van Volkenburgh, E.3
Hoy, M.4
Wright, L.5
Beckwith, F.6
-
65
-
-
42249094026
-
The evolution of virulence and pathogenicity in plant pathogen populations
-
Sacristán S, García-Arenal F. (2008). The evolution of virulence and pathogenicity in plant pathogen populations. Mol Plant Pathol 9: 369-384.
-
(2008)
Mol Plant Pathol
, vol.9
, pp. 369-384
-
-
Sacristán, S.1
García-Arenal, F.2
-
67
-
-
72949107142
-
Introducing mothur: Opensource, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB et al. (2009). Introducing mothur: opensource, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
-
68
-
-
85054618380
-
-
Plant Roots-The Hidden Half. CRC Press, Taylor & Francis Group: Boca Raton, FL, USA
-
Sieber TN, Grünig CR. (2013) Fungal root endophytes. In: Plant Roots-The Hidden Half. CRC Press, Taylor & Francis Group: Boca Raton, FL, USA, 38-1-38-49.
-
(2013)
Fungal root Endophytes
, pp. 381-3849
-
-
Sieber, T.N.1
Grünig, C.R.2
-
69
-
-
84979866891
-
Genome-wide analysis in three Fusarium pathogens identifies rapidly evolving chromosomes and genes associated with pathogenicity
-
Sperschneider J, Gardiner DM, Thatcher LF, Lyons R, Singh KB, Manners JM et al. (2015). Genome-wide analysis in three Fusarium pathogens identifies rapidly evolving chromosomes and genes associated with pathogenicity. Genome Biol Evol 7: 1613-1627.
-
(2015)
Genome Biol Evol
, vol.7
, pp. 1613-1627
-
-
Sperschneider, J.1
Gardiner, D.M.2
Thatcher, L.F.3
Lyons, R.4
Singh, K.B.5
Manners, J.M.6
-
71
-
-
80052609446
-
Negative effects on survival and performance of Norway spruce seedlings colonized by dark septate root endophytes are primarily isolate-dependent
-
Tellenbach C, Grünig CR, Sieber TN. (2011). Negative effects on survival and performance of Norway spruce seedlings colonized by dark septate root endophytes are primarily isolate-dependent. Environ Microbiol 13: 2508-2517.
-
(2011)
Environ Microbiol
, vol.13
, pp. 2508-2517
-
-
Tellenbach, C.1
Grünig, C.R.2
Sieber, T.N.3
-
75
-
-
34547186634
-
A mutualistic symbiosis between a dark septate endophytic fungus, Heteroconium chaetospira, and a nonmycorrhizal plant, Chinese cabbage
-
Usuki F, Narisawa K. (2007). A mutualistic symbiosis between a dark septate endophytic fungus, Heteroconium chaetospira, and a nonmycorrhizal plant, Chinese cabbage. Mycologia 99: 175-184.
-
(2007)
Mycologia
, vol.99
, pp. 175-184
-
-
Usuki, F.1
Narisawa, K.2
-
76
-
-
0037086194
-
Extensive fungal diversity in plant roots
-
Vandenkoornhuyse P, Baldauf SL, Leyval C, Straczek J, Young JPW. (2002). Extensive fungal diversity in plant roots. Science 295: 2051-2051.
-
(2002)
Science
, vol.295
, pp. 2051
-
-
Vandenkoornhuyse, P.1
Baldauf, S.L.2
Leyval, C.3
Straczek, J.4
Young, J.P.W.5
-
77
-
-
0027341504
-
Plantspecific soil-borne diseases contribute to succession in foredune vegetation
-
Van der Putten WH, Van Dijk C, Peters BAM. (1993). Plantspecific soil-borne diseases contribute to succession in foredune vegetation. Nature 362: 53-56.
-
(1993)
Nature
, vol.362
, pp. 53-56
-
-
Van Der Putten, W.H.1
Van Dijk, C.2
Peters, B.A.M.3
-
78
-
-
77949455515
-
Towards a trait-based quantification of species niche
-
Violle C, Jiang L. (2009). Towards a trait-based quantification of species niche. J Plant Ecol 2: 87-93.
-
(2009)
J Plant Ecol
, vol.2
, pp. 87-93
-
-
Violle, C.1
Jiang, L.2
-
79
-
-
34247372313
-
Let the concept of trait be functional!
-
Violle C, Navas M-L, Vile D, Kazakou E, Fortunel C, Hummel I et al. (2007). Let the concept of trait be functional!. Oikos 116: 882-892.
-
(2007)
Oikos
, vol.116
, pp. 882-892
-
-
Violle, C.1
Navas, M.-L.2
Vile, D.3
Kazakou, E.4
Fortunel, C.5
Hummel, I.6
-
80
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang Q, Garrity GM, Tiedje JM, Cole JR. (2007). Naive bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
81
-
-
2942651148
-
Ecological linkages between aboveground and belowground biota
-
Wardle DA, Bardgett RD, Klironomos JN, Setälä H, van der Putten WH, Wall DH. (2004). Ecological linkages between aboveground and belowground biota. Science 304: 1629-1633.
-
(2004)
Science
, vol.304
, pp. 1629-1633
-
-
Wardle, D.A.1
Bardgett, R.D.2
Klironomos, J.N.3
Setälä, H.4
Van Der Putten, W.H.5
Wall, D.H.6
-
82
-
-
51749095104
-
Phylocom: Software for the analysis of community phylogenetic structure and trait evolution
-
Webb CO, Ackerly DD, Kembel SW. (2008). Phylocom: software for the analysis of community phylogenetic structure and trait evolution. Bioinformatics 24: 2098-2100.
-
(2008)
Bioinformatics
, vol.24
, pp. 2098-2100
-
-
Webb, C.O.1
Ackerly, D.D.2
Kembel, S.W.3
-
83
-
-
84894275723
-
Determinants of rootassociated fungal communities within Asteraceae in a semi-arid grassland
-
Wehner J, Powell JR, Muller LAH, Caruso T, Veresoglou SD, Hempel S et al. (2014). Determinants of rootassociated fungal communities within Asteraceae in a semi-arid grassland. J Ecol 102: 425-436.
-
(2014)
J Ecol
, vol.102
, pp. 425-436
-
-
Wehner, J.1
Powell, J.R.2
Muller, L.A.H.3
Caruso, T.4
Veresoglou, S.D.5
Hempel, S.6
-
84
-
-
0003681664
-
Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
-
Innis MA, Gelfand DH, Sninsky JJ, Tj White (eds)
-
White TJ, Bruns T, Lee S, Taylor J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, Tj White (eds), PCR Protocols: A Guide to Methods and Applications. Academic Press: San Diego, CA, USA, pp 315-322.
-
(1990)
PCR Protocols: A Guide to Methods and Applications. Academic Press: San Diego, CA, USA
, pp. 315-322
-
-
White, T.J.1
Bruns, T.2
Lee, S.3
Taylor, J.4
-
85
-
-
84926526982
-
Some isolates of the nematophagous fungus Pochonia chlamydosporia promote root growth and reduce flowering time of tomato
-
Zavala-Gonzalez EA, Escudero N, Lopez-Moya F, Aranda-Martinez A, Exposito A, Ricaño-Rodríguez J et al. (2015). Some isolates of the nematophagous fungus Pochonia chlamydosporia promote root growth and reduce flowering time of tomato. Ann Appl Biol 166: 472-483.
-
(2015)
Ann Appl Biol
, vol.166
, pp. 472-483
-
-
Zavala-Gonzalez, E.A.1
Escudero, N.2
Lopez-Moya, F.3
Aranda-Martinez, A.4
Exposito, A.5
Ricaño-Rodríguez, J.6
|