-
1
-
-
84893386522
-
Lung-resident memory CD8 T cells (TRM) are indispensable for optimal cross-protection against pulmonary virus infection
-
Wu, T. et al. Lung-resident memory CD8 T cells (TRM) are indispensable for optimal cross-protection against pulmonary virus infection. J. Leukoc. Biol. 95, 215-224 (2014).
-
(2014)
J. Leukoc. Biol.
, vol.95
, pp. 215-224
-
-
Wu, T.1
-
2
-
-
84899553624
-
Lung niches for the generation and maintenance of tissue-resident memory T cells
-
Turner, D.L. et al. Lung niches for the generation and maintenance of tissue-resident memory T cells. Mucosal Immunol. 7, 501-510 (2014).
-
(2014)
Mucosal Immunol.
, vol.7
, pp. 501-510
-
-
Turner, D.L.1
-
3
-
-
61349161008
-
Migration, maintenance and recall of memory T cells in peripheral tissues
-
Woodland, D.L. & Kohlmeier, J.E. Migration, maintenance and recall of memory T cells in peripheral tissues. Nat. Rev. Immunol. 9, 153-161 (2009).
-
(2009)
Nat. Rev. Immunol.
, vol.9
, pp. 153-161
-
-
Woodland, D.L.1
Kohlmeier, J.E.2
-
4
-
-
79956119017
-
Regional and mucosal memory T cells
-
Sheridan, B.S. & Lefrançois, L. Regional and mucosal memory T cells. Nat. Immunol. 12, 485-491 (2011).
-
(2011)
Nat. Immunol.
, vol.12
, pp. 485-491
-
-
Sheridan, B.S.1
Lefrançois, L.2
-
5
-
-
84872772721
-
Distribution and compartmentalization of human circulating and tissue-resident memory T cell subsets
-
Sathaliyawala, T. et al. Distribution and compartmentalization of human circulating and tissue-resident memory T cell subsets. Immunity 38, 187-197 (2013).
-
(2013)
Immunity
, vol.38
, pp. 187-197
-
-
Sathaliyawala, T.1
-
6
-
-
84936846381
-
The emerging role of resident memory T cells in protective immunity and inflammatory disease
-
Park, C.O. & Kupper, T.S. The emerging role of resident memory T cells in protective immunity and inflammatory disease. Nat. Med. 21, 688-697 (2015).
-
(2015)
Nat. Med.
, vol.21
, pp. 688-697
-
-
Park, C.O.1
Kupper, T.S.2
-
7
-
-
84888013845
-
Transcriptional downregulation of S1pr1 is required for the establishment of resident memory CD8+ T cells
-
Skon, C.N. et al. Transcriptional downregulation of S1pr1 is required for the establishment of resident memory CD8+ T cells. Nat. Immunol. 14, 1285-1293 (2013).
-
(2013)
Nat. Immunol.
, vol.14
, pp. 1285-1293
-
-
Skon, C.N.1
-
8
-
-
84888008030
-
The developmental pathway for CD103+CD8+ tissue-resident memory T cells of skin
-
Mackay, L.K. et al. The developmental pathway for CD103+CD8+ tissue-resident memory T cells of skin. Nat. Immunol. 14, 1294-1301 (2013).
-
(2013)
Nat. Immunol.
, vol.14
, pp. 1294-1301
-
-
Mackay, L.K.1
-
9
-
-
84900474436
-
Oral infection drives a distinct population of intestinal resident memory CD8+ T cells with enhanced protective function
-
Sheridan, B.S. et al. Oral infection drives a distinct population of intestinal resident memory CD8+ T cells with enhanced protective function. Immunity 40, 747-757 (2014).
-
(2014)
Immunity
, vol.40
, pp. 747-757
-
-
Sheridan, B.S.1
-
10
-
-
84928904487
-
Quantifying memory CD8 T cells reveals regionalization of immunosurveillance
-
Steinert, E.M. et al. Quantifying memory CD8 T cells reveals regionalization of immunosurveillance. Cell 161, 737-749 (2015).
-
(2015)
Cell
, vol.161
, pp. 737-749
-
-
Steinert, E.M.1
-
12
-
-
84862776631
-
Preexisting influenza-specific CD4+ T cells correlate with disease protection against influenza challenge in humans
-
Wilkinson, T.M. et al. Preexisting influenza-specific CD4+ T cells correlate with disease protection against influenza challenge in humans. Nat. Med. 18, 274-280 (2012).
-
(2012)
Nat. Med.
, vol.18
, pp. 274-280
-
-
Wilkinson, T.M.1
-
13
-
-
84887473368
-
Cellular immune correlates of protection against symptomatic pandemic influenza
-
Sridhar, S. et al. Cellular immune correlates of protection against symptomatic pandemic influenza. Nat. Med. 19, 1305-1312 (2013).
-
(2013)
Nat. Med.
, vol.19
, pp. 1305-1312
-
-
Sridhar, S.1
-
14
-
-
84887515800
-
Lung airway-surveilling CXCR3hi memory CD8+ T cells are critical for protection against influenza A virus
-
Slütter, B., Pewe, L.L., Kaech, S.M. & Harty, J.T. Lung airway-surveilling CXCR3hi memory CD8+ T cells are critical for protection against influenza A virus. Immunity 39, 939-948 (2013).
-
(2013)
Immunity
, vol.39
, pp. 939-948
-
-
Slütter, B.1
Pewe, L.L.2
Kaech, S.M.3
Harty, J.T.4
-
15
-
-
84874235143
-
Conservation and divergence in the transcriptional programs of the human and mouse immune systems
-
Shay, T. et al. Conservation and divergence in the transcriptional programs of the human and mouse immune systems. Proc. Natl. Acad. Sci. USA 110, 2946-2951 (2013).
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 2946-2951
-
-
Shay, T.1
-
16
-
-
84857416171
-
Maintenance of peripheral naive T cells is sustained by thymus output in mice but not humans
-
den Braber, I. et al. Maintenance of peripheral naive T cells is sustained by thymus output in mice but not humans. Immunity 36, 288-297 (2012).
-
(2012)
Immunity
, vol.36
, pp. 288-297
-
-
Den Braber, I.1
-
17
-
-
79957884875
-
CD8+ T cells with an intraepithelial phenotype upregulate cytotoxic function upon influenza infection in human lung
-
Piet, B. et al. CD8+ T cells with an intraepithelial phenotype upregulate cytotoxic function upon influenza infection in human lung. J. Clin. Invest. 121, 2254-2263 (2011).
-
(2011)
J. Clin. Invest.
, vol.121
, pp. 2254-2263
-
-
Piet, B.1
-
18
-
-
77958071242
-
Sprouty proteins inhibit receptor-mediated activation of phosphatidylinositol-specific phospholipase C
-
Akbulut, S. et al. Sprouty proteins inhibit receptor-mediated activation of phosphatidylinositol-specific phospholipase C. Mol. Biol. Cell 21, 3487-3496 (2010).
-
(2010)
Mol. Biol. Cell
, vol.21
, pp. 3487-3496
-
-
Akbulut, S.1
-
19
-
-
84866911829
-
Camera: A competitive gene set test accounting for inter-gene correlation
-
Wu, D. & Smyth, G.K. Camera: a competitive gene set test accounting for inter-gene correlation. Nucleic Acids Res. 40, e133 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. e133
-
-
Wu, D.1
Smyth, G.K.2
-
20
-
-
79251636742
-
Glucose depletion in the airway surface liquid is essential for sterility of the airways
-
Pezzulo, A.A. et al. Glucose depletion in the airway surface liquid is essential for sterility of the airways. PLoS One 6, e16166 (2011).
-
(2011)
PLoS One
, vol.6
, pp. e16166
-
-
Pezzulo, A.A.1
-
21
-
-
0034028817
-
Analysis of fractalkine receptor CX3CR1 function by targeted deletion and green fluorescent protein reporter gene insertion
-
Jung, S. et al. Analysis of fractalkine receptor CX3CR1 function by targeted deletion and green fluorescent protein reporter gene insertion. Mol. Cell. Biol. 20, 4106-4114 (2000).
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4106-4114
-
-
Jung, S.1
-
22
-
-
84876693895
-
Sensing and alarm function of resident memory CD8+ T cells
-
Schenkel, J.M., Fraser, K.A., Vezys, V. & Masopust, D. Sensing and alarm function of resident memory CD8+ T cells. Nat. Immunol. 14, 509-513 (2013).
-
(2013)
Nat. Immunol.
, vol.14
, pp. 509-513
-
-
Schenkel, J.M.1
Fraser, K.A.2
Vezys, V.3
Masopust, D.4
-
23
-
-
84932126559
-
Airway-resident memory CD8 T cells provide antigen-specific protection against respiratory virus challenge through rapid IFN-? Production
-
McMaster, S.R., Wilson, J.J., Wang, H. & Kohlmeier, J.E. Airway-resident memory CD8 T cells provide antigen-specific protection against respiratory virus challenge through rapid IFN-? production. J. Immunol. 195, 203-209 (2015).
-
(2015)
J. Immunol.
, vol.195
, pp. 203-209
-
-
McMaster, S.R.1
Wilson, J.J.2
Wang, H.3
Kohlmeier, J.E.4
-
24
-
-
40249113328
-
Direct regulation of TWIST by HIF-1a promotes metastasis
-
Yang, M.H. et al. Direct regulation of TWIST by HIF-1a promotes metastasis. Nat. Cell Biol. 10, 295-305 (2008).
-
(2008)
Nat. Cell Biol.
, vol.10
, pp. 295-305
-
-
Yang, M.H.1
-
25
-
-
84879685794
-
BACH2 represses effector programs to stabilize Treg-mediated immune homeostasis
-
Roychoudhuri, R. et al. BACH2 represses effector programs to stabilize Treg-mediated immune homeostasis. Nature 498, 506-510 (2013).
-
(2013)
Nature
, vol.498
, pp. 506-510
-
-
Roychoudhuri, R.1
-
26
-
-
30044440799
-
Effector and memory CD8+ T cell fate coupled by T-bet and eomesodermin
-
Intlekofer, A.M. et al. Effector and memory CD8+ T cell fate coupled by T-bet and eomesodermin. Nat. Immunol. 6, 1236-1244 (2005).
-
(2005)
Nat. Immunol.
, vol.6
, pp. 1236-1244
-
-
Intlekofer, A.M.1
-
27
-
-
84963543332
-
T-box transcription factors combine with the cytokines TGF-? and IL-15 to control tissue-resident memory T cell fate
-
Mackay, L.K. et al. T-box transcription factors combine with the cytokines TGF-? and IL-15 to control tissue-resident memory T cell fate. Immunity 43, 1101-1111 (2015).
-
(2015)
Immunity
, vol.43
, pp. 1101-1111
-
-
Mackay, L.K.1
-
28
-
-
22544451206
-
Runx3 regulates integrin alpha E/CD103 and CD4 expression during development of CD4?/CD8+ T cells
-
Grueter, B. et al. Runx3 regulates integrin alpha E/CD103 and CD4 expression during development of CD4?/CD8+ T cells. J. Immunol. 175, 1694-1705 (2005).
-
(2005)
J. Immunol.
, vol.175
, pp. 1694-1705
-
-
Grueter, B.1
-
29
-
-
80155164160
-
Exogenous stimuli maintain intraepithelial lymphocytes via aryl hydrocarbon receptor activation
-
Li, Y. et al. Exogenous stimuli maintain intraepithelial lymphocytes via aryl hydrocarbon receptor activation. Cell 147, 629-640 (2011).
-
(2011)
Cell
, vol.147
, pp. 629-640
-
-
Li, Y.1
-
30
-
-
84877597818
-
BATF is required for normal expression of gut-homing receptors by T helper cells in response to retinoic acid
-
Wang, C. et al. BATF is required for normal expression of gut-homing receptors by T helper cells in response to retinoic acid. J. Exp. Med. 210, 475-489 (2013).
-
(2013)
J. Exp. Med.
, vol.210
, pp. 475-489
-
-
Wang, C.1
-
31
-
-
84964887792
-
Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes
-
Mackay, L.K. et al. Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes. Science 352, 459-463 (2016).
-
(2016)
Science
, vol.352
, pp. 459-463
-
-
Mackay, L.K.1
-
32
-
-
84943198960
-
Blimp-1 homolog Hobit identifies effector-type lymphocytes in humans
-
Vieira Braga, F.A. et al. Blimp-1 homolog Hobit identifies effector-type lymphocytes in humans. Eur. J. Immunol. 45, 2945-2958 (2015).
-
(2015)
Eur. J. Immunol.
, vol.45
, pp. 2945-2958
-
-
Vieira Braga, F.A.1
-
33
-
-
84867896903
-
Transcriptional control of effector and memory CD8+ T cell differentiation
-
Kaech, S.M. & Cui, W. Transcriptional control of effector and memory CD8+ T cell differentiation. Nat. Rev. Immunol. 12, 749-761 (2012).
-
(2012)
Nat. Rev. Immunol.
, vol.12
, pp. 749-761
-
-
Kaech, S.M.1
Cui, W.2
-
34
-
-
84878264534
-
Notch controls generation and function of human effector CD8+ T cells
-
Kuijk, L.M. et al. Notch controls generation and function of human effector CD8+ T cells. Blood 121, 2638-2646 (2013).
-
(2013)
Blood
, vol.121
, pp. 2638-2646
-
-
Kuijk, L.M.1
-
35
-
-
84886672916
-
Hypoxia-inducible factors enhance the effector responses of CD8+ T cells to persistent antigen
-
Doedens, A.L. et al. Hypoxia-inducible factors enhance the effector responses of CD8+ T cells to persistent antigen. Nat. Immunol. 14, 1173-1182 (2013).
-
(2013)
Nat. Immunol.
, vol.14
, pp. 1173-1182
-
-
Doedens, A.L.1
-
36
-
-
84911171912
-
A central role for Notch in effector CD8+ T cell differentiation
-
Backer, R.A. et al. A central role for Notch in effector CD8+ T cell differentiation. Nat. Immunol. 15, 1143-1151 (2014).
-
(2014)
Nat. Immunol.
, vol.15
, pp. 1143-1151
-
-
Backer, R.A.1
-
37
-
-
84949670848
-
Notch in T cell differentiation: All things considered
-
Amsen, D., Helbig, C. & Backer, R.A. Notch in T cell differentiation: all things considered. Trends Immunol. 36, 802-814 (2015).
-
(2015)
Trends Immunol.
, vol.36
, pp. 802-814
-
-
Amsen, D.1
Helbig, C.2
Backer, R.A.3
-
38
-
-
84880729295
-
Notch simultaneously orchestrates multiple helper T cell programs independently of cytokine signals
-
Bailis, W. et al. Notch simultaneously orchestrates multiple helper T cell programs independently of cytokine signals. Immunity 39, 148-159 (2013).
-
(2013)
Immunity
, vol.39
, pp. 148-159
-
-
Bailis, W.1
-
39
-
-
84861893409
-
Notch controls the magnitude of T helper cell responses by promoting cellular longevity
-
Helbig, C. et al. Notch controls the magnitude of T helper cell responses by promoting cellular longevity. Proc. Natl. Acad. Sci. USA 109, 9041-9046 (2012).
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 9041-9046
-
-
Helbig, C.1
-
40
-
-
84925284022
-
Notch controls the survival of memory CD4+ T cells by regulating glucose uptake
-
Maekawa, Y. et al. Notch controls the survival of memory CD4+ T cells by regulating glucose uptake. Nat. Med. 21, 55-61 (2015).
-
(2015)
Nat. Med.
, vol.21
, pp. 55-61
-
-
Maekawa, Y.1
-
41
-
-
84897028273
-
Editorial: Pulmonary resident memory CD8 T cells: Here today, gone tomorrow
-
Anderson, K.G. & Masopust, D. Editorial: Pulmonary resident memory CD8 T cells: here today, gone tomorrow. J. Leukoc. Biol. 95, 199-201 (2014).
-
(2014)
J. Leukoc. Biol.
, vol.95
, pp. 199-201
-
-
Anderson, K.G.1
Masopust, D.2
-
42
-
-
79960919901
-
Control of TH17 cells occurs in the small intestine
-
Esplugues, E. et al. Control of TH17 cells occurs in the small intestine. Nature 475, 514-518 (2011).
-
(2011)
Nature
, vol.475
, pp. 514-518
-
-
Esplugues, E.1
-
43
-
-
67650711599
-
The chemokine CXCL16 is highly and constitutively expressed by human bronchial epithelial cells
-
Day, C., Patel, R., Guillen, C. & Wardlaw, A.J. The chemokine CXCL16 is highly and constitutively expressed by human bronchial epithelial cells. Exp. Lung Res. 35, 272-283 (2009).
-
(2009)
Exp. Lung Res.
, vol.35
, pp. 272-283
-
-
Day, C.1
Patel, R.2
Guillen, C.3
Wardlaw, A.J.4
-
44
-
-
84255199079
-
The transcription factor Myc controls metabolic reprogramming upon T lymphocyte activation
-
Wang, R. et al. The transcription factor Myc controls metabolic reprogramming upon T lymphocyte activation. Immunity 35, 871-882 (2011).
-
(2011)
Immunity
, vol.35
, pp. 871-882
-
-
Wang, R.1
-
45
-
-
84930576092
-
Metabolic control of type 1 regulatory T cell differentiation by AHR and HIF1-?
-
Mascanfroni, I.D. et al. Metabolic control of type 1 regulatory T cell differentiation by AHR and HIF1-?. Nat. Med. 21, 638-646 (2015).
-
(2015)
Nat. Med.
, vol.21
, pp. 638-646
-
-
Mascanfroni, I.D.1
-
46
-
-
84931573706
-
Notch receptor-ligand engagement maintains hematopoietic stem cell quiescence and niche retention
-
Wang, W. et al. Notch receptor-ligand engagement maintains hematopoietic stem cell quiescence and niche retention. Stem Cells 33, 2280-2293 (2015).
-
(2015)
Stem Cells
, vol.33
, pp. 2280-2293
-
-
Wang, W.1
-
47
-
-
84928975351
-
IL-7-induced glycerol transport and TAG synthesis promotes memory CD8+ T cell longevity
-
Cui, G. et al. IL-7-induced glycerol transport and TAG synthesis promotes memory CD8+ T cell longevity. Cell 161, 750-761 (2015).
-
(2015)
Cell
, vol.161
, pp. 750-761
-
-
Cui, G.1
-
48
-
-
1842524153
-
Integration of TGF-?/Smad and Jagged1/Notch signalling in epithelial-to-mesenchymal transition
-
Zavadil, J., Cermak, L., Soto-Nieves, N. & Böttinger, E.P. Integration of TGF-?/Smad and Jagged1/Notch signalling in epithelial-to-mesenchymal transition. EMBO J. 23, 1155-1165 (2004).
-
(2004)
EMBO J.
, vol.23
, pp. 1155-1165
-
-
Zavadil, J.1
Cermak, L.2
Soto-Nieves, N.3
Böttinger, E.P.4
-
49
-
-
0345166971
-
Cross-talk between the Notch and TGF-? Signaling pathways mediated by interaction of the Notch intracellular domain with Smad3
-
Blokzijl, A. et al. Cross-talk between the Notch and TGF-? signaling pathways mediated by interaction of the Notch intracellular domain with Smad3. J. Cell Biol. 163, 723-728 (2003).
-
(2003)
J. Cell Biol.
, vol.163
, pp. 723-728
-
-
Blokzijl, A.1
-
50
-
-
84859997488
-
Notch receptors and Smad3 signaling cooperate in the induction of interleukin-9-producing T cells
-
Elyaman, W. et al. Notch receptors and Smad3 signaling cooperate in the induction of interleukin-9-producing T cells. Immunity 36, 623-634 (2012).
-
(2012)
Immunity
, vol.36
, pp. 623-634
-
-
Elyaman, W.1
-
51
-
-
65849329190
-
Vaccination against human influenza A/H3N2 virus prevents the induction of heterosubtypic immunity against lethal infection with avian influenza A/H5N1 virus
-
Bodewes, R. et al. Vaccination against human influenza A/H3N2 virus prevents the induction of heterosubtypic immunity against lethal infection with avian influenza A/H5N1 virus. PLoS One 4, e5538 (2009).
-
(2009)
PLoS One
, vol.4
, pp. e5538
-
-
Bodewes, R.1
-
52
-
-
0022500810
-
Extraction of immune and inflammatory cells from human lung parenchyma: Evaluation of an enzymatic digestion procedure
-
Holt, P.G. et al. Extraction of immune and inflammatory cells from human lung parenchyma: evaluation of an enzymatic digestion procedure. Clin. Exp. Immunol. 66, 188-200 (1986).
-
(1986)
Clin. Exp. Immunol.
, vol.66
, pp. 188-200
-
-
Holt, P.G.1
-
53
-
-
7244224901
-
Frequent expression of the natural killer cell receptor KLRG1 in human cord blood T cells: Correlation with replicative history
-
Marcolino, I. et al. Frequent expression of the natural killer cell receptor KLRG1 in human cord blood T cells: correlation with replicative history. Eur. J. Immunol. 34, 2672-2680 (2004).
-
(2004)
Eur. J. Immunol.
, vol.34
, pp. 2672-2680
-
-
Marcolino, I.1
-
54
-
-
78650483491
-
Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips
-
Shi, W., Oshlack, A. & Smyth, G.K. Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips. Nucleic Acids Res. 38, e204 (2010).
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. e204
-
-
Shi, W.1
Oshlack, A.2
Smyth, G.K.3
-
55
-
-
0034666108
-
STRING: A web-server to retrieve and display the repeatedly occurring neighbourhood of a gene
-
Snel, B., Lehmann, G., Bork, P. & Huynen, M.A. STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene. Nucleic Acids Res. 28, 3442-3444 (2000).
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3442-3444
-
-
Snel, B.1
Lehmann, G.2
Bork, P.3
Huynen, M.A.4
-
56
-
-
84941201582
-
Single-cell messenger RNA sequencing reveals rare intestinal cell types
-
Grün, D. et al. Single-cell messenger RNA sequencing reveals rare intestinal cell types. Nature 525, 251-255 (2015).
-
(2015)
Nature
, vol.525
, pp. 251-255
-
-
Grün, D.1
-
57
-
-
75249087100
-
EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson, M.D., McCarthy, D.J. & Smyth, G.K. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26, 139-140 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
|