메뉴 건너뛰기




Volumn 44, Issue 17, 2016, Pages 8407-8416

Structural features of influenza A virus panhandle RNA enabling the activation of RIG-I independently of 5'-triphosphate

Author keywords

[No Author keywords available]

Indexed keywords

5' TRIPHOSPHATE; BETA INTERFERON; DOUBLE STRANDED RNA; PHOSPHATE; RETINOIC ACID INDUCIBLE PROTEIN I; UNCLASSIFIED DRUG; VIRUS RNA; DDX58 PROTEIN, HUMAN; HYDROGEN; POLYPHOSPHATE; PROTEIN BINDING; TRIPHOSPHORIC ACID;

EID: 84991247078     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkw525     Document Type: Article
Times cited : (31)

References (33)
  • 1
    • 84878173821 scopus 로고    scopus 로고
    • Cytosolic sensing of viruses
    • Goubau, D., Deddouche, S. and Reis, E.S.C. (2013) Cytosolic sensing of viruses. Immunity, 38, 855-869.
    • (2013) Immunity , vol.38 , pp. 855-869
    • Goubau, D.1    Deddouche, S.2    Reis, E.S.C.3
  • 2
    • 80052143412 scopus 로고    scopus 로고
    • RIG-I-like receptors: Cytoplasmic sensors for non-self RNA
    • Kato, H., Takahasi, K. and Fujita, T. (2011) RIG-I-like receptors: cytoplasmic sensors for non-self RNA. Immunol. Rev., 243, 91-98.
    • (2011) Immunol. Rev , vol.243 , pp. 91-98
    • Kato, H.1    Takahasi, K.2    Fujita, T.3
  • 3
    • 79956314622 scopus 로고    scopus 로고
    • Immune signaling by RIG-I-like receptors
    • Loo, Y.M. and Gale, M. Jr (2011) Immune signaling by RIG-I-like receptors. Immunity, 34, 680-692.
    • (2011) Immunity , vol.34 , pp. 680-692
    • Loo, Y.M.1    Gale, M.2
  • 8
    • 84869765600 scopus 로고    scopus 로고
    • The thermodynamic basis for viral RNA detection by the RIG-I innate immune sensor
    • Vela, A., Fedorova, O., Ding, S.C. and Pyle, A.M. (2012) The thermodynamic basis for viral RNA detection by the RIG-I innate immune sensor. J. Biol. Chem., 287, 42564-42573.
    • (2012) J. Biol. Chem , vol.287 , pp. 42564-42573
    • Vela, A.1    Fedorova, O.2    Ding, S.C.3    Pyle, A.M.4
  • 11
    • 46949097299 scopus 로고    scopus 로고
    • Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid-inducible gene-I and melanoma differentiation-associated gene 5
    • Kato, H., Takeuchi, O., Mikamo-Satoh, E., Hirai, R., Kawai, T., Matsushita, K., Hiiragi, A., Dermody, T.S., Fujita, T. and Akira, S. (2008) Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid-inducible gene-I and melanoma differentiation-associated gene 5. J. Exp. Med., 205, 1601-1610.
    • (2008) J. Exp. Med , vol.205 , pp. 1601-1610
    • Kato, H.1    Takeuchi, O.2    Mikamo-Satoh, E.3    Hirai, R.4    Kawai, T.5    Matsushita, K.6    Hiiragi, A.7    Dermody, T.S.8    Fujita, T.9    Akira, S.10
  • 12
    • 34547960175 scopus 로고    scopus 로고
    • Small self-RNA generated by RNase L amplifies antiviral innate immunity
    • Malathi, K., Dong, B., Gale, M. Jr and Silverman, R.H. (2007) Small self-RNA generated by RNase L amplifies antiviral innate immunity. Nature, 448, 816-819.
    • (2007) Nature , vol.448 , pp. 816-819
    • Malathi, K.1    Dong, B.2    Gale, M.3    Silverman, R.H.4
  • 13
    • 0018848920 scopus 로고
    • The 3' and 5'-terminal sequences of influenza A, B and C virus RNA segments are highly conserved and show partial inverted complementarity
    • Desselberger, U., Racaniello, V.R., Zazra, J.J. and Palese, P. (1980) The 3' and 5'-terminal sequences of influenza A, B and C virus RNA segments are highly conserved and show partial inverted complementarity. Gene, 8, 315-328.
    • (1980) Gene , vol.8 , pp. 315-328
    • Desselberger, U.1    Racaniello, V.R.2    Zazra, J.J.3    Palese, P.4
  • 14
    • 0028245360 scopus 로고
    • The influenza virus panhandle is involved in the initiation of transcription
    • Fodor, E., Pritlove, D.C. and Brownlee, G.G. (1994) The influenza virus panhandle is involved in the initiation of transcription. J. Virol., 68, 4092-4096.
    • (1994) J. Virol , vol.68 , pp. 4092-4096
    • Fodor, E.1    Pritlove, D.C.2    Brownlee, G.G.3
  • 16
    • 77954242369 scopus 로고    scopus 로고
    • The chase for the RIG-I ligand-recent advances
    • Schlee, M. and Hartmann, G. (2010) The chase for the RIG-I ligand-recent advances. Mol. Ther., 18, 1254-1262.
    • (2010) Mol. Ther , vol.18 , pp. 1254-1262
    • Schlee, M.1    Hartmann, G.2
  • 18
    • 68049089651 scopus 로고    scopus 로고
    • Recognition of 5' triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus
    • Schlee, M., Roth, A., Hornung, V., Hagmann, C.A., Wimmenauer, V., Barchet, W., Coch, C., Janke, M., Mihailovic, A., Wardle, G. et al. (2009) Recognition of 5' triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus. Immunity, 31, 25-34.
    • (2009) Immunity , vol.31 , pp. 25-34
    • Schlee, M.1    Roth, A.2    Hornung, V.3    Hagmann, C.A.4    Wimmenauer, V.5    Barchet, W.6    Coch, C.7    Janke, M.8    Mihailovic, A.9    Wardle, G.10
  • 20
    • 77957997708 scopus 로고    scopus 로고
    • Preference of RIG-I for short viral RNA molecules in infected cells revealed by next-generation sequencing
    • Baum, A., Sachidanandam, R. and Garcia-Sastre, A. (2010) Preference of RIG-I for short viral RNA molecules in infected cells revealed by next-generation sequencing. Proc. Natl. Acad. Sci. U.S.A., 107, 16303-16308.
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 16303-16308
    • Baum, A.1    Sachidanandam, R.2    Garcia-Sastre, A.3
  • 21
    • 0035845528 scopus 로고    scopus 로고
    • Structural features of an influenza virus promoter and their implications for viral RNA synthesis
    • Bae, S.H., Cheong, H.K., Lee, J.H., Cheong, C., Kainosho, M. and Choi, B.S. (2001) Structural features of an influenza virus promoter and their implications for viral RNA synthesis. Proc. Natl. Acad. Sci. U.S.A., 98, 10602-10607.
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 10602-10607
    • Bae, S.H.1    Cheong, H.K.2    Lee, J.H.3    Cheong, C.4    Kainosho, M.5    Choi, B.S.6
  • 22
    • 0029400480 scopus 로고
    • NMRPipe: A multidimensional spectral processing system based on UNIX pipes
    • Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J. and Bax, A. (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR, 6, 277-293.
    • (1995) J. Biomol. NMR , vol.6 , pp. 277-293
    • Delaglio, F.1    Grzesiek, S.2    Vuister, G.W.3    Zhu, G.4    Pfeifer, J.5    Bax, A.6
  • 23
    • 84871444338 scopus 로고    scopus 로고
    • University of California Press, San Francisco
    • Goddard, T.D. and Kneller, D.G. (2008) Sparky 3. University of California Press, San Francisco.
    • (2008) Sparky 3
    • Goddard, T.D.1    Kneller, D.G.2
  • 24
    • 34250688767 scopus 로고    scopus 로고
    • Thermodynamics and kinetics for base-pair opening in the P1 duplex of the Tetrahymena group i ribozyme
    • Lee, J.H. and Pardi, A. (2007) Thermodynamics and kinetics for base-pair opening in the P1 duplex of the Tetrahymena group I ribozyme. Nucleic Acids Res., 35, 2965-2974.
    • (2007) Nucleic Acids Res , vol.35 , pp. 2965-2974
    • Lee, J.H.1    Pardi, A.2
  • 25
    • 84863374236 scopus 로고    scopus 로고
    • NMR study on the B-Z junction formation of DNA duplexes induced by Z-DNA binding domain of human ADAR1
    • Lee, Y.M., Kim, H.E., Park, C.J., Lee, A.R., Ahn, H.C., Cho, S.J., Choi, K.H., Choi, B.S. and Lee, J.H. (2012) NMR study on the B-Z junction formation of DNA duplexes induced by Z-DNA binding domain of human ADAR1. J. Am. Chem. Soc., 134, 5276-5283.
    • (2012) J. Am. Chem. Soc , vol.134 , pp. 5276-5283
    • Lee, Y.M.1    Kim, H.E.2    Park, C.J.3    Lee, A.R.4    Ahn, H.C.5    Cho, S.J.6    Choi, K.H.7    Choi, B.S.8    Lee, J.H.9
  • 26
    • 77449092763 scopus 로고    scopus 로고
    • High-resolution NMR structure of an RNA model system: The 14-mer cUUCGg tetraloop hairpin RNA
    • Nozinovic, S., Fürtig, B., Jonker, H.R., Richter, C. and Schwalbe, H. (2010) High-resolution NMR structure of an RNA model system: the 14-mer cUUCGg tetraloop hairpin RNA. Nucleic Acids Res., 38, 683-694.
    • (2010) Nucleic Acids Res , vol.38 , pp. 683-694
    • Nozinovic, S.1    Fürtig, B.2    Jonker, H.R.3    Richter, C.4    Schwalbe, H.5
  • 27
    • 79952325540 scopus 로고    scopus 로고
    • Crystal structure of RIG-I C-terminal domain bound to blunt-ended double-strand RNA without 5' triphosphate
    • Lu, C., Ranjith-Kumar, C.T., Hao, L., Kao, C.C. and Li, P. (2011) Crystal structure of RIG-I C-terminal domain bound to blunt-ended double-strand RNA without 5' triphosphate. Nucleic Acids Res., 39, 1565-1575.
    • (2011) Nucleic Acids Res , vol.39 , pp. 1565-1575
    • Lu, C.1    Ranjith-Kumar, C.T.2    Hao, L.3    Kao, C.C.4    Li, P.5
  • 28
    • 84923279873 scopus 로고    scopus 로고
    • A critical base pair in k-turns that confers folding characteristics and correlates with biological function
    • McPhee, S.A., Huang, L. and Lilley, D.M. (2014) A critical base pair in k-turns that confers folding characteristics and correlates with biological function. Nat. Commun., 5, 5127.
    • (2014) Nat. Commun , vol.5 , pp. 5127
    • McPhee, S.A.1    Huang, L.2    Lilley, D.M.3
  • 30
    • 80054703126 scopus 로고    scopus 로고
    • Structural basis for the activation of innate immune pattern-recognition receptor RIG-I by viral RNA
    • Kowalinski, E., Lunardi, T., McCarthy, A.A., Louber, J., Brunel, J., Grigorov, B., Gerlier, D. and Cusack, S. (2011) Structural basis for the activation of innate immune pattern-recognition receptor RIG-I by viral RNA. Cell, 147, 423-435.
    • (2011) Cell , vol.147 , pp. 423-435
    • Kowalinski, E.1    Lunardi, T.2    McCarthy, A.A.3    Louber, J.4    Brunel, J.5    Grigorov, B.6    Gerlier, D.7    Cusack, S.8
  • 31
    • 84899957213 scopus 로고    scopus 로고
    • Structural basis for ubiquitin-mediated antiviral signal activation by RIG-I
    • Peisley, A., Wu, B., Xu, H., Chen, Z.J. and Hur, S. (2014) Structural basis for ubiquitin-mediated antiviral signal activation by RIG-I. Nature, 509, 110-114.
    • (2014) Nature , vol.509 , pp. 110-114
    • Peisley, A.1    Wu, B.2    Xu, H.3    Chen, Z.J.4    Hur, S.5
  • 32
    • 47949092573 scopus 로고    scopus 로고
    • Innate immunity induced by composition-dependent RIG-I recognition of hepatitis C virus RNA
    • Saito, T., Owen, D.M., Jiang, F., Marcotrigiano, J. and Gale, M. Jr (2008) Innate immunity induced by composition-dependent RIG-I recognition of hepatitis C virus RNA. Nature, 454, 523-527.
    • (2008) Nature , vol.454 , pp. 523-527
    • Saito, T.1    Owen, D.M.2    Jiang, F.3    Marcotrigiano, J.4    Gale, M.5
  • 33
    • 19644366142 scopus 로고    scopus 로고
    • Elastic Properties of a Single-Stranded Charged Homopolymeric Ribonucleotide
    • Seol, Y., Skinner, G. and Visscher, K. (2004) Elastic Properties of a Single-Stranded Charged Homopolymeric Ribonucleotide. Phys. Rev. Lett., 93, 118102.
    • (2004) Phys. Rev. Lett , vol.93 , pp. 118102
    • Seol, Y.1    Skinner, G.2    Visscher, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.