-
1
-
-
84931004252
-
Investigating the biology of alpha herpesviruses with MS-based proteomics
-
Engel, E. A., Song, R., Koyuncu, O. O., and Enquist, L. W. (2015) Investigating the biology of alpha herpesviruses with MS-based proteomics. Proteomics 15, 1943-1956
-
(2015)
Proteomics
, vol.15
, pp. 1943-1956
-
-
Engel, E.A.1
Song, R.2
Koyuncu, O.O.3
Enquist, L.W.4
-
2
-
-
0344304755
-
Treatment of herpes simplex virus infections
-
Brady, R. C., and Bernstein, D. I. (2004) Treatment of herpes simplex virus infections. Antiviral Res. 61, 73-81
-
(2004)
Antiviral Res.
, vol.61
, pp. 73-81
-
-
Brady, R.C.1
Bernstein, D.I.2
-
3
-
-
84872800289
-
Mucosal herpes immunity and immunopathology to ocular and genital herpes simplex virus infections
-
Chentoufi, A. A., and Benmohamed, L. (2012) Mucosal herpes immunity and immunopathology to ocular and genital herpes simplex virus infections. Clin. Dev. Immunol. 2012, 149135
-
(2012)
Clin. Dev. Immunol.
, vol.2012
, pp. 149135
-
-
Chentoufi, A.A.1
Benmohamed, L.2
-
4
-
-
84931569620
-
Reactivated herpes simplex infection increases the risk of Alzheimer's disease
-
Lövheim, H., Gilthorpe, J., Adolfsson, R., Nilsson, L. G., and Elgh, F. (2014) Reactivated herpes simplex infection increases the risk of Alzheimer's disease. Alzheimers Dement. 11, 593-599
-
(2014)
Alzheimers Dement
, vol.11
, pp. 593-599
-
-
Lövheim, H.1
Gilthorpe, J.2
Adolfsson, R.3
Nilsson, L.G.4
Elgh, F.5
-
5
-
-
84900532147
-
Herpes simplex virus type-2 stimulates HIV-1 replication in cervical tissues: Implications for HIV-1 transmission and efficacy of anti-HIV-1 microbicides
-
Rollenhagen, C., Lathrop, M. J., Macura, S. L., Doncel, G. F., and Asin, S. N. (2014) Herpes simplex virus type-2 stimulates HIV-1 replication in cervical tissues: implications for HIV-1 transmission and efficacy of anti-HIV-1 microbicides. Mucosal Immunol. 7, 1165-1174
-
(2014)
Mucosal Immunol
, vol.7
, pp. 1165-1174
-
-
Rollenhagen, C.1
Lathrop, M.J.2
Macura, S.L.3
Doncel, G.F.4
Asin, S.N.5
-
6
-
-
84946397770
-
Towards integrative structural mass spectrometry: Benefits from hybrid approaches
-
Marcoux, J., and Cianférani, S. (2015) Towards integrative structural mass spectrometry: Benefits from hybrid approaches. Methods 89, 4-12
-
(2015)
Methods
, vol.89
, pp. 4-12
-
-
Marcoux, J.1
Cianférani, S.2
-
7
-
-
25144498379
-
A human protein-protein interaction network: A resource for annotating the proteome
-
Stelzl, U., Worm, U., Lalowski, M., Haenig, C., Brembeck, F. H., Goehler, H., Stroedicke, M., Zenkner, M., Schoenherr, A., Koeppen, S., Timm, J., Mintzlaff, S., Abraham, C., Bock, N., Kietzmann, S., Goedde, A., Toksöz, E., Droege, A., Krobitsch, S., Korn, B., Birchmeier, W., Lehrach, H., and Wanker, E. E. (2005) A human protein-protein interaction network: A resource for annotating the proteome. Cell 122, 957-968
-
(2005)
Cell
, vol.122
, pp. 957-968
-
-
Stelzl, U.1
Worm, U.2
Lalowski, M.3
Haenig, C.4
Brembeck, F.H.5
Goehler, H.6
Stroedicke, M.7
Zenkner, M.8
Schoenherr, A.9
Koeppen, S.10
Timm, J.11
Mintzlaff, S.12
Abraham, C.13
Bock, N.14
Kietzmann, S.15
Goedde, A.16
Toksöz, E.17
Droege, A.18
Krobitsch, S.19
Korn, B.20
Birchmeier, W.21
Lehrach, H.22
Wanker, E.E.23
more..
-
8
-
-
18244386985
-
Prediction of protein function using protein-protein interaction data
-
Deng, M., Zhang, K., Mehta, S., Chen, T., and Sun, F. (2002) Prediction of protein function using protein-protein interaction data. Proc. IEEE Comput. Soc. Bioinform. Conf. 1, 197-206
-
(2002)
Proc IEEE Comput. Soc. Bioinform. Conf.
, vol.1
, pp. 197-206
-
-
Deng, M.1
Zhang, K.2
Mehta, S.3
Chen, T.4
Sun, F.5
-
9
-
-
84861310336
-
From protein interaction networks to novel therapeutic strategies
-
Jaeger, S., and Aloy, P. (2012) From protein interaction networks to novel therapeutic strategies. IUBMB Life 64, 529-537
-
(2012)
IUBMB Life
, vol.64
, pp. 529-537
-
-
Jaeger, S.1
Aloy, P.2
-
10
-
-
84928017558
-
Virus-host interactomics: New insights and opportunities for antiviral drug discovery
-
de Chassey, B., Meyniel-Schicklin, L., Vonderscher, J., André, P., and Lotteau, V. (2014) Virus-host interactomics: new insights and opportunities for antiviral drug discovery. Genome Med. 6, 115
-
(2014)
Genome Med.
, vol.6
, pp. 115
-
-
De Chassey, B.1
Meyniel-Schicklin, L.2
Vonderscher, J.3
André, P.4
Lotteau, V.5
-
11
-
-
84927516180
-
Computational approaches for prediction of pathogen-host protein-protein interactions
-
Nourani, E., Khunjush, F., and Durmu?, S. (2015) Computational approaches for prediction of pathogen-host protein-protein interactions. Front. Microbiol. 6, 94
-
(2015)
Front. Microbiol.
, vol.6
, pp. 94
-
-
Nourani, E.1
Khunjush, F.2
Durmuş, S.3
-
12
-
-
84866452395
-
Techniques to cope with missing data in host-pathogen protein interaction prediction
-
Kshirsagar, M., Carbonell, J., and Klein-Seetharaman, J. (2012) Techniques to cope with missing data in host-pathogen protein interaction prediction. Bioinformatics 28, i466-i472
-
(2012)
Bioinformatics
, vol.28
, pp. i466-i472
-
-
Kshirsagar, M.1
Carbonell, J.2
Klein-Seetharaman, J.3
-
13
-
-
84871820346
-
Systems biology of pathogenhost interaction: Networks of protein-protein interaction within pathogens and pathogen-human interactions in the post-genomic era
-
Durmuş Tekir, S. D., and Ülgen, K. Ö. (2013) Systems biology of pathogenhost interaction: Networks of protein-protein interaction within pathogens and pathogen-human interactions in the post-genomic era. Biotechnol. J. 8, 85-96
-
(2013)
Biotechnol. J.
, vol.8
, pp. 85-96
-
-
Durmuş Tekir, S.D.1
Ülgen, K.O.2
-
14
-
-
85017004540
-
The impact of mass spectrometry-based proteomics on fundamental discoveries in virology
-
Greco, T. M., Diner, B. A., and Cristea, I. M. (2014) The Impact of Mass Spectrometry-Based Proteomics on Fundamental Discoveries in Virology. Annu. Rev. Virol. 1, 581-604
-
(2014)
Annu. Rev. Virol.
, vol.1
, pp. 581-604
-
-
Greco, T.M.1
Diner, B.A.2
Cristea, I.M.3
-
15
-
-
84958078818
-
Visualization of host-polerovirus interaction topologies using Protein Interaction Reporter technology
-
DeBlasio, S. L., Chavez, J. D., Alexander, M. M., Ramsey, J., Eng, J. K., Mahoney, J., Gray, S. M., Bruce, J. E., and Cilia, M. (2015) Visualization of host-polerovirus interaction topologies using Protein Interaction Reporter technology. J. Virol. 90, 1973-1987
-
(2015)
J. Virol.
, vol.90
, pp. 1973-1987
-
-
DeBlasio, S.L.1
Chavez, J.D.2
Alexander, M.M.3
Ramsey, J.4
Eng, J.K.5
Mahoney, J.6
Gray, S.M.7
Bruce, J.E.8
Cilia, M.9
-
16
-
-
79956351653
-
Unraveling the dynamics of protein interactions with quantitative mass spectrometry
-
Ramisetty, S. R., and Washburn, M. P. (2011) Unraveling the dynamics of protein interactions with quantitative mass spectrometry. Crit. Rev. Biochem. Mol. Biol. 46, 216-228
-
(2011)
Crit. Rev. Biochem. Mol. Biol.
, vol.46
, pp. 216-228
-
-
Ramisetty, S.R.1
Washburn, M.P.2
-
17
-
-
84891799734
-
The MIntAct project - IntAct as a common curation platform for 11 molecular interaction databases
-
Orchard, S., Ammari, M., Aranda, B., Breuza, L., Briganti, L., Broackes-Carter, F., Campbell, N. H., Chavali, G., Chen, C., Del-Toro, N., Duesbury, M., Dumousseau, M., Galeota, E., Hinz, U., Iannuccelli, M., Jagannathan, S., Jimenez, R., Khadake, J., Lagreid, A., Licata, L., Lovering, R. C., Meldal, B., Melidoni, A. N., Milagros, M., Peluso, D., Perfetto, L., Porras, P., Raghunath, A., Ricard-Blum, S., Roechert, B., Stutz, A., Tognolli, M., van Roey, K., Cesareni, G., and Hermjakob, H. (2014) The MIntAct project - IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res. 42, D358-D63
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D358-D363
-
-
Orchard, S.1
Ammari, M.2
Aranda, B.3
Breuza, L.4
Briganti, L.5
Broackes-Carter, F.6
Campbell, N.H.7
Chavali, G.8
Chen, C.9
Del-Toro, N.10
Duesbury, M.11
Dumousseau, M.12
Galeota, E.13
Hinz, U.14
Iannuccelli, M.15
Jagannathan, S.16
Jimenez, R.17
Khadake, J.18
Lagreid, A.19
Licata, L.20
Lovering, R.C.21
Meldal, B.22
Melidoni, A.N.23
Milagros, M.24
Peluso, D.25
Perfetto, L.26
Porras, P.27
Raghunath, A.28
Ricard-Blum, S.29
Roechert, B.30
Stutz, A.31
Tognolli, M.32
Van Roey, K.33
Cesareni, G.34
Hermjakob, H.35
more..
-
18
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M. (2000) The Protein Data Bank. Nucleic Acids Res. 28, 235-242
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
-
19
-
-
78651295835
-
EMDataBank.org: Unified data resource for CryoEM
-
Lawson, C. L., Baker, M. L., Best, C., Bi, C., Dougherty, M., Feng, P., van Ginkel, G., Devkota, B., Lagerstedt, I., Ludtke, S. J., Newman, R. H., Oldfield, T. J., Rees, I., Sahni, G., Sala, R., Velankar, S., Warren, J., Westbrook, J. D., Henrick, K., Kleywegt, G. J., Berman, H. M., and Chiu, W. (2011) EMDataBank.org: unified data resource for CryoEM. Nucleic Acids Res. 39, D456-64
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. D456-D464
-
-
Lawson, C.L.1
Baker, M.L.2
Best, C.3
Bi, C.4
Dougherty, M.5
Feng, P.6
Van Ginkel, G.7
Devkota, B.8
Lagerstedt, I.9
Ludtke, S.J.10
Newman, R.H.11
Oldfield, T.J.12
Rees, I.13
Sahni, G.14
Sala, R.15
Velankar, S.16
Warren, J.17
Westbrook, J.D.18
Henrick, K.19
Kleywegt, G.J.20
Berman, H.M.21
Chiu, W.22
more..
-
20
-
-
84941117508
-
VirHostNet 2.0: Surfing on the web of virus/host molecular interactions data
-
Guirimand, T., Delmotte, S., and Navratil, V. (2015) VirHostNet 2.0: surfing on the web of virus/host molecular interactions data. Nucleic Acids Res. 43, D583-D7
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D583-D587
-
-
Guirimand, T.1
Delmotte, S.2
Navratil, V.3
-
21
-
-
84941051170
-
STRING v10: Protein-protein interaction networks, integrated over the tree of life
-
Szklarczyk, D., Franceschini, A., Wyder, S., Forslund, K., Heller, D., Huerta-Cepas, J., Simonovic, M., Roth, A., Santos, A., Tsafou, K. P., Kuhn, M., Bork, P., Jensen, L. J., and von Mering, C. (2015) STRING v10: protein-protein interaction networks, integrated over the tree of life. Nucleic Acids Res. 43, D447-D52
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D447-D452
-
-
Szklarczyk, D.1
Franceschini, A.2
Wyder, S.3
Forslund, K.4
Heller, D.5
Huerta-Cepas, J.6
Simonovic, M.7
Roth, A.8
Santos, A.9
Tsafou, K.P.10
Kuhn, M.11
Bork, P.12
Jensen, L.J.13
Von Mering, C.14
-
22
-
-
84907424304
-
A mass spectrometry view of stable and transient protein interactions
-
Budayeva, H. G., and Cristea, I. M. (2014) A mass spectrometry view of stable and transient protein interactions. Adv. Exp. Med. Biol. 806, 263-282
-
(2014)
Adv. Exp. Med. Biol.
, vol.806
, pp. 263-282
-
-
Budayeva, H.G.1
Cristea, I.M.2
-
23
-
-
58149178567
-
PIPs: Human protein-protein interaction prediction database
-
McDowall, M. D., Scott, M. S., and Barton, G. J. (2009) PIPs: human protein-protein interaction prediction database. Nucleic Acids Res. 37, D651-D6
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. D651-D656
-
-
McDowall, M.D.1
Scott, M.S.2
Barton, G.J.3
-
24
-
-
84865545263
-
A computational framework for boosting confidence in high-throughput protein-protein interaction datasets
-
Hosur, R., Peng, J., Vinayagam, A., Stelzl, U., Xu, J., Perrimon, N., Bienkowska, J., and Berger, B. (2012) A computational framework for boosting confidence in high-throughput protein-protein interaction datasets. Genome Biol. 13, R76
-
(2012)
Genome Biol.
, vol.13
, pp. R76
-
-
Hosur, R.1
Peng, J.2
Vinayagam, A.3
Stelzl, U.4
Xu, J.5
Perrimon, N.6
Bienkowska, J.7
Berger, B.8
-
25
-
-
84888103756
-
Computational prediction of protein-protein interaction networks: Algorithms and resources
-
Zahiri, J., Bozorgmehr, J. H., and Masoudi-Nejad, A. (2013) Computational prediction of protein-protein interaction networks: algorithms and resources. Curr. Genomics 14, 397-414
-
(2013)
Curr. Genomics
, vol.14
, pp. 397-414
-
-
Zahiri, J.1
Bozorgmehr, J.H.2
Masoudi-Nejad, A.3
-
26
-
-
78751584760
-
iWRAP: An interface threading approach with application to prediction of cancerrelated protein-protein interactions
-
Hosur, R., Xu, J., Bienkowska, J., and Berger, B. (2011) iWRAP: An interface threading approach with application to prediction of cancerrelated protein-protein interactions. J. Mol. Biol. 405, 1295-1310
-
(2011)
J. Mol. Biol.
, vol.405
, pp. 1295-1310
-
-
Hosur, R.1
Xu, J.2
Bienkowska, J.3
Berger, B.4
-
27
-
-
77954278629
-
Struct2Net: A web service to predict protein-protein interactions using a structurebased approach
-
Singh, R., Park, D., Xu, J., Hosur, R., and Berger, B. (2010) Struct2Net: a web service to predict protein-protein interactions using a structurebased approach. Nucleic Acids Res. 38, W508-W15
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. W508-W515
-
-
Singh, R.1
Park, D.2
Xu, J.3
Hosur, R.4
Berger, B.5
-
28
-
-
84929094094
-
Predicting protein-protein interactions from primary protein sequences using a novel multi-scale local feature representation scheme and the random forest
-
You, Z. H., Chan, K. C. C., and Hu, P. (2015) Predicting protein-protein interactions from primary protein sequences using a novel multi-scale local feature representation scheme and the random forest. PLoS ONE 10, e0125811
-
(2015)
PLoS ONE
, vol.10
, pp. e0125811
-
-
You, Z.H.1
Chan, K.C.C.2
Hu, P.3
-
29
-
-
79958028560
-
Adaptive compressive learning for prediction of protein-protein interactions from primary sequence
-
Zhang, Y. N., Pan, X. Y., Huang, Y., and Shen, H. Bin (2011) Adaptive compressive learning for prediction of protein-protein interactions from primary sequence. J. Theor. Biol. 283, 44-52
-
(2011)
J. Theor. Biol.
, vol.283
, pp. 44-52
-
-
Zhang, Y.N.1
Pan, X.Y.2
Huang, Y.3
Bin, S.H.4
-
30
-
-
84908213903
-
An improved interolog mapping-based computational prediction of protein-protein interactions with increased network coverage
-
Folador, E. L., Hassan, S. S., Lemke, N., Barh, D., Silva, A., Ferreira, R. S., and Azevedo, V. (2014) An improved interolog mapping-based computational prediction of protein-protein interactions with increased network coverage. Integr. Biol. 6, 1080-1087
-
(2014)
Integr. Biol.
, vol.6
, pp. 1080-1087
-
-
Folador, E.L.1
Hassan, S.S.2
Lemke, N.3
Barh, D.4
Silva, A.5
Ferreira, R.S.6
Azevedo, V.7
-
31
-
-
3042569597
-
Annotation transfer between genomes: Protein-protein interologs and protein-DNA regulogs
-
Yu, H., Luscombe, N. M., Lu, H. X., Zhu, X., Xia, Y., Han, J. D. J., Bertin, N., Chung, S., Vidal, M., and Gerstein, M. (2004) Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs. Genome Res. 14, 1107-1118
-
(2004)
Genome Res.
, vol.14
, pp. 1107-1118
-
-
Yu, H.1
Luscombe, N.M.2
Lu, H.X.3
Zhu, X.4
Xia, Y.5
Han, J.D.J.6
Bertin, N.7
Chung, S.8
Vidal, M.9
Gerstein, M.10
-
32
-
-
84902747099
-
Homology-based prediction of interactions between proteins using averaged one-dependence estimators
-
Murakami, Y., and Mizuguchi, K. (2014) Homology-based prediction of interactions between proteins using Averaged One-Dependence Estimators. BMC Bioinformatics 15, 213
-
(2014)
BMC Bioinformatics
, vol.15
, pp. 213
-
-
Murakami, Y.1
Mizuguchi, K.2
-
33
-
-
40049092465
-
An assessment of the uses of homologous interactions
-
Saeed, R., and Deane, C. (2008) An assessment of the uses of homologous interactions. Bioinformatics 24, 689-695
-
(2008)
Bioinformatics
, vol.24
, pp. 689-695
-
-
Saeed, R.1
Deane, C.2
-
34
-
-
50149119228
-
Comprehensive characterization of extracellular herpes simplex virus type 1 virions
-
Loret, S., Guay, G., and Lippé, R. (2008) Comprehensive characterization of extracellular herpes simplex virus type 1 virions. J. Virol. 82, 8605-8618
-
(2008)
J. Virol.
, vol.82
, pp. 8605-8618
-
-
Loret, S.1
Guay, G.2
Lippé, R.3
-
35
-
-
0345306753
-
Three-dimensional structure of herpes simplex virus from cryo-electron tomography
-
Grünewald, K., Desai, P., Winkler, D. C., Heymann, J. B., Belnap, D. M., Baumeister, W., and Steven, A. C. (2003) Three-dimensional structure of herpes simplex virus from cryo-electron tomography. Science 302, 1396-1398
-
(2003)
Science
, vol.302
, pp. 1396-1398
-
-
Grünewald, K.1
Desai, P.2
Winkler, D.C.3
Heymann, J.B.4
Belnap, D.M.5
Baumeister, W.6
Steven, A.C.7
-
36
-
-
0034747028
-
DIP: The database of interacting proteins: 2001 update
-
Xenarios, I., Fernandez, E., Salwinski, L., Duan, X. J., Thompson, M. J., Marcotte, E. M., and Eisenberg, D. (2001) DIP: The Database of Interacting Proteins: 2001 update. Nucleic Acids Res. 29, 239-241
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 239-241
-
-
Xenarios, I.1
Fernandez, E.2
Salwinski, L.3
Duan, X.J.4
Thompson, M.J.5
Marcotte, E.M.6
Eisenberg, D.7
-
37
-
-
84941145210
-
The BioGRID interaction database: 2015 update
-
Chatr-Aryamontri, A., Breitkreutz, B. J., Oughtred, R., Boucher, L., Heinicke, S., Chen, D., Stark, C., Breitkreutz, A., Kolas, N., O'Donnell, L., Reguly, T., Nixon, J., Ramage, L., Winter, A., Sellam, A., Chang, C., Hirschman, J., Theesfeld, C., Rust, J., Livstone, M. S., Dolinski, K., and Tyers, M. (2015) The BioGRID interaction database: 2015 update. Nucleic Acids Res. 43, D470-D8
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D470-D478
-
-
Chatr-Aryamontri, A.1
Breitkreutz, B.J.2
Oughtred, R.3
Boucher, L.4
Heinicke, S.5
Chen, D.6
Stark, C.7
Breitkreutz, A.8
Kolas, N.9
O'Donnell, L.10
Reguly, T.11
Nixon, J.12
Ramage, L.13
Winter, A.14
Sellam, A.15
Chang, C.16
Hirschman, J.17
Theesfeld, C.18
Rust, J.19
Livstone, M.S.20
Dolinski, K.21
Tyers, M.22
more..
-
38
-
-
34250675300
-
Epstein-Barr virus and virus human protein interaction maps
-
Calderwood, M. A., Venkatesan, K., Xing, L., Chase, M. R., Vazquez, A., Holthaus, A. M., Ewence, A. E., Li, N., Hirozane-Kishikawa, T., Hill, D. E., Vidal, M., Kieff, E., and Johannsen, E. (2007) Epstein-Barr virus and virus human protein interaction maps. Proc. Natl. Acad. Sci. U.S.A. 104, 7606-7611
-
(2007)
Proc. Natl. Acad. Sci. U. S. A
, vol.104
, pp. 7606-7611
-
-
Calderwood, M.A.1
Venkatesan, K.2
Xing, L.3
Chase, M.R.4
Vazquez, A.5
Holthaus, A.M.6
Ewence, A.E.7
Li, N.8
Hirozane-Kishikawa, T.9
Hill, D.E.10
Vidal, M.11
Kieff, E.12
Johannsen, E.13
-
39
-
-
0031022820
-
Physical and functional interactions between herpes simplex virus immediate-early proteins ICP4 and ICP27
-
Panagiotidis, C. A., Lium, E. K., and Silverstein, S. J. (1997) Physical and functional interactions between herpes simplex virus immediate-early proteins ICP4 and ICP27. J. Virol. 71, 1547-1557
-
(1997)
J. Virol.
, vol.71
, pp. 1547-1557
-
-
Panagiotidis, C.A.1
Lium, E.K.2
Silverstein, S.J.3
-
40
-
-
43249090955
-
Virion-wide protein interactions of Kaposi's sarcoma-associated herpesvirus
-
Rozen, R., Sathish, N., Li, Y., and Yuan, Y. (2008) Virion-wide protein interactions of Kaposi's sarcoma-associated herpesvirus. J. Virol. 82, 4742-4750
-
(2008)
J. Virol.
, vol.82
, pp. 4742-4750
-
-
Rozen, R.1
Sathish, N.2
Li, Y.3
Yuan, Y.4
-
41
-
-
2442653990
-
Proteomics of herpes simplex virus replication compartments: Association of cellular DNA replication, repair, recombination, and chromatin remodeling proteins with ICP8
-
Taylor, T. J., and Knipe, D. M. (2004) Proteomics of herpes simplex virus replication compartments: association of cellular DNA replication, repair, recombination, and chromatin remodeling proteins with ICP8. J. Virol. 78, 5856-5866
-
(2004)
J. Virol.
, vol.78
, pp. 5856-5866
-
-
Taylor, T.J.1
Knipe, D.M.2
-
42
-
-
22544438727
-
Determination of interactions between tegument proteins of herpes simplex virus type 1
-
Vittone, V., Diefenbach, E., Triffett, D., Douglas, M. W., Cunningham, A. L., and Diefenbach, R. J. (2005) Determination of interactions between tegument proteins of herpes simplex virus type 1. J. Virol. 79, 9566-9571
-
(2005)
J. Virol.
, vol.79
, pp. 9566-9571
-
-
Vittone, V.1
Diefenbach, E.2
Triffett, D.3
Douglas, M.W.4
Cunningham, A.L.5
Diefenbach, R.J.6
-
43
-
-
79953661477
-
Yeast two hybrid analyses reveal novel binary interactions between human cytomegalovirus-encoded virion proteins
-
To, A., Bai, Y., Shen, A., Gong, H., Umamoto, S., Lu, S., and Liu, F. (2011) Yeast two hybrid analyses reveal novel binary interactions between human cytomegalovirus-encoded virion proteins. PLoS ONE 6, e17796
-
(2011)
PLoS ONE
, vol.6
, pp. e17796
-
-
To, A.1
Bai, Y.2
Shen, A.3
Gong, H.4
Umamoto, S.5
Lu, S.6
Liu, F.7
-
44
-
-
49049113021
-
Identification of structural protein-protein interactions of herpes simplex virus type 1
-
Lee, J. H., Vittone, V., Diefenbach, E., Cunningham, A. L., and Diefenbach, R. J. (2008) Identification of structural protein-protein interactions of herpes simplex virus type 1. Virology 378, 347-354
-
(2008)
Virology
, vol.378
, pp. 347-354
-
-
Lee, J.H.1
Vittone, V.2
Diefenbach, E.3
Cunningham, A.L.4
Diefenbach, R.J.5
-
45
-
-
30844443758
-
Herpesviral protein networks and their interaction with the human proteome
-
Uetz, P., Dong, Y. A., Zeretzke, C., Atzler, C., Baiker, A., Berger, B., Rajagopala, S. V., Roupelieva, M., Rose, D., Fossum, E., and Haas, J. (2006) Herpesviral protein networks and their interaction with the human proteome. Science 311, 239-242
-
(2006)
Science
, vol.311
, pp. 239-242
-
-
Uetz, P.1
Dong, Y.A.2
Zeretzke, C.3
Atzler, C.4
Baiker, A.5
Berger, B.6
Rajagopala, S.V.7
Roupelieva, M.8
Rose, D.9
Fossum, E.10
Haas, J.11
-
46
-
-
77949440090
-
Improving the yeast two-hybrid system with permutated fusions proteins: The varicella zoster virus interactome
-
Stellberger, T., Häuser, R., Baiker, A., Pothineni, V. R., Haas, J., and Uetz, P. (2010) Improving the yeast two-hybrid system with permutated fusions proteins: the Varicella Zoster Virus interactome. Proteome Sci. 8, 8
-
(2010)
Proteome Sci.
, vol.8
, pp. 8
-
-
Stellberger, T.1
Häuser, R.2
Baiker, A.3
Pothineni, V.R.4
Haas, J.5
Uetz, P.6
-
47
-
-
70349677166
-
Evolutionarily conserved herpesviral protein interaction networks
-
Fossum, E., Friedel, C. C., Rajagopala, S. V., Titz, B., Baiker, A., Schmidt, T., Kraus, T., Stellberger, T., Rutenberg, C., Suthram, S., Bandyopadhyay, S., Rose, D., von Brunn, A., Uhlmann, M., Zeretzke, C., Dong, Y. A., Boulet, H., Koegl, M., Bailer, S. M., Koszinowski, U., Ideker, T., Uetz, P., Zimmer, R., and Haas, J. (2009) Evolutionarily conserved herpesviral protein interaction networks. PLoS Pathog. 5, e1000570
-
(2009)
PLoS Pathog
, vol.5
, pp. e1000570
-
-
Fossum, E.1
Friedel, C.C.2
Rajagopala, S.V.3
Titz, B.4
Baiker, A.5
Schmidt, T.6
Kraus, T.7
Stellberger, T.8
Rutenberg, C.9
Suthram, S.10
Bandyopadhyay, S.11
Rose, D.12
Von Brunn, A.13
Uhlmann, M.14
Zeretzke, C.15
Dong, Y.A.16
Boulet, H.17
Koegl, M.18
Bailer, S.M.19
Koszinowski, U.20
Ideker, T.21
Uetz, P.22
Zimmer, R.23
Haas, J.24
more..
-
48
-
-
84946069451
-
UniProt: A hub for protein information
-
The UniProt Consortium
-
The UniProt Consortium (2014) UniProt: a hub for protein information. Nucleic Acids Res. 43, D204-D212
-
(2014)
Nucleic Acids Res.
, vol.43
, pp. D204-D212
-
-
-
49
-
-
84856489442
-
HHblits: Lightning-fast iterative protein sequence searching by HMM-HMM alignment
-
Remmert, M., Biegert, A., Hauser, A., and Söding, J. (2012) HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nat. Methods 9, 173-175
-
(2012)
Nat. Methods
, vol.9
, pp. 173-175
-
-
Remmert, M.1
Biegert, A.2
Hauser, A.3
Söding, J.4
-
50
-
-
84925267288
-
UniRef clusters: A comprehensive and scalable alternative for improving sequence similarity searches
-
Suzek, B. E., Wang, Y., Huang, H., McGarvey, P. B., and Wu, C. H. (2015) UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches. Bioinformatics 31, 926-932
-
(2015)
Bioinformatics
, vol.31
, pp. 926-932
-
-
Suzek, B.E.1
Wang, Y.2
Huang, H.3
McGarvey, P.B.4
Wu, C.H.5
-
52
-
-
79959846617
-
PSICQUIC and PSISCORE: Accessing and scoring molecular interactions
-
Aranda, B., Blankenburg, H., Kerrien, S., Brinkman, F. S. L., Ceol, A., Chautard, E., Dana, J. M., De Las Rivas, J., Dumousseau, M., Galeota, E., Gaulton, A., Goll, J., Hancock, R. E. W., Isserlin, R., Jimenez, R. C., Kerssemakers, J., Khadake, J., Lynn, D. J., Michaut, M., O'Kelly, G., Ono, K., Orchard, S., Prieto, C., Razick, S., Rigina, O., Salwinski, L., Simonovic, M., Velankar, S., Winter, A., Wu, G., Bader, G. D., Cesareni, G., Donaldson, I. M., Eisenberg, D., Kleywegt, G. J., Overington, J., Ricard-Blum, S., Tyers, M., Albrecht, M., and Hermjakob, H. (2011) PSICQUIC and PSISCORE: accessing and scoring molecular interactions. Nat. Methods 8, 528-529
-
(2011)
Nat. Methods
, vol.8
, pp. 528-529
-
-
Aranda, B.1
Blankenburg, H.2
Kerrien, S.3
Brinkman, F.S.L.4
Ceol, A.5
Chautard, E.6
Dana, J.M.7
De Las Rivas, J.8
Dumousseau, M.9
Galeota, E.10
Gaulton, A.11
Goll, J.12
Hancock, R.E.W.13
Isserlin, R.14
Jimenez, R.C.15
Kerssemakers, J.16
Khadake, J.17
Lynn, D.J.18
Michaut, M.19
O'Kelly, G.20
Ono, K.21
Orchard, S.22
Prieto, C.23
Razick, S.24
Rigina, O.25
Salwinski, L.26
Simonovic, M.27
Velankar, S.28
Winter, A.29
Wu, G.30
Bader, G.D.31
Cesareni, G.32
Donaldson, I.M.33
Eisenberg, D.34
Kleywegt, G.J.35
Overington, J.36
Ricard-Blum, S.37
Tyers, M.38
Albrecht, M.39
Hermjakob, H.40
more..
-
53
-
-
84940998130
-
Merging and scoring molecular interactions utilising existing community standards: Tools, use-cases and a case study
-
bau
-
Villaveces, J. M., Jiménez, R. C., Porras, P., Del-Toro, N., Duesbury, M., Dumousseau, M., Orchard, S., Choi, H., Ping, P., Zong, N. C., Askenazi, M., Habermann, B. H., and Hermjakob, H. (2015) Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study. Database 2015, bau131
-
(2015)
Database
, vol.2015
, pp. 131
-
-
Villaveces, J.M.1
Jiménez, R.C.2
Porras, P.3
Del-Toro, N.4
Duesbury, M.5
Dumousseau, M.6
Orchard, S.7
Choi, H.8
Ping, P.9
Zong, N.C.10
Askenazi, M.11
Habermann, B.H.12
Hermjakob, H.13
-
55
-
-
84868647779
-
Effects of protein interaction data integration, representation and reliability on the use of network properties for drug target prediction
-
Mora, A., and Donaldson, I. M. (2012) Effects of protein interaction data integration, representation and reliability on the use of network properties for drug target prediction. BMC Bioinformatics 13, 294
-
(2012)
BMC Bioinformatics
, vol.13
, pp. 294
-
-
Mora, A.1
Donaldson, I.M.2
-
56
-
-
35348976204
-
Broadening the horizon-level 2.5 of the HUPO-PSI format for molecular interactions
-
Kerrien, S., Orchard, S., Montecchi-Palazzi, L., Aranda, B., Quinn, A. F., Vinod, N., Bader, G. D., Xenarios, I., Wojcik, J., Sherman, D., Tyers, M., Salama, J. J., Moore, S., Ceol, A., Chatr-Aryamontri, A., Oesterheld, M., Stümpflen, V., Salwinski, L., Nerothin, J., Cerami, E., Cusick, M. E., Vidal, M., Gilson, M., Armstrong, J., Woollard, P., Hogue, C., Eisenberg, D., Cesareni, G., Apweiler, R., and Hermjakob, H. (2007) Broadening the horizon-level 2.5 of the HUPO-PSI format for molecular interactions. BMC Biol. 5, 44
-
(2007)
BMC Biol.
, vol.5
, pp. 44
-
-
Kerrien, S.1
Orchard, S.2
Montecchi-Palazzi, L.3
Aranda, B.4
Quinn, A.F.5
Vinod, N.6
Bader, G.D.7
Xenarios, I.8
Wojcik, J.9
Sherman, D.10
Tyers, M.11
Salama, J.J.12
Moore, S.13
Ceol, A.14
Chatr-Aryamontri, A.15
Oesterheld, M.16
Stümpflen, V.17
Salwinski, L.18
Nerothin, J.19
Cerami, E.20
Cusick, M.E.21
Vidal, M.22
Gilson, M.23
Armstrong, J.24
Woollard, P.25
Hogue, C.26
Eisenberg, D.27
Cesareni, G.28
Apweiler, R.29
Hermjakob, H.30
more..
-
57
-
-
84938874328
-
Development of data representation standards by the human proteome organization proteomics standards initiative
-
Deutsch, E. W., Albar, J. P., Binz, P.-A., Eisenacher, M., Jones, A. R., Mayer, G., Omenn, G. S., Orchard, S., Vizcaíno, J. A., and Hermjakob, H. (2015) Development of data representation standards by the human proteome organization proteomics standards initiative. J. Am. Med. Inform. Assoc. 22, 495-506
-
(2015)
J. Am. Med. Inform. Assoc.
, vol.22
, pp. 495-506
-
-
Deutsch, E.W.1
Albar, J.P.2
Binz, P.-A.3
Eisenacher, M.4
Jones, A.R.5
Mayer, G.6
Omenn, G.S.7
Orchard, S.8
Vizcaíno, J.A.9
Hermjakob, H.10
-
58
-
-
84865635245
-
Improper tagging of the non-essential small capsid protein VP26 impairs nuclear capsid egress of herpes simplex virus
-
Nagel, C. H., Döhner, K., Binz, A., Bauerfeind, R., and Sodeik, B. (2012) Improper tagging of the non-essential small capsid protein VP26 impairs nuclear capsid egress of herpes simplex virus. PLoS ONE 7, e44177
-
(2012)
PLoS ONE
, vol.7
, pp. e44177
-
-
Nagel, C.H.1
Döhner, K.2
Binz, A.3
Bauerfeind, R.4
Sodeik, B.5
-
59
-
-
84860187343
-
Single-cell analysis of population context advances RNAi screening at multiple levels
-
Snijder, B., Sacher, R., Ramo, P., Liberali, P., Mench, K., Wolfrum, N., Burleigh, L., Scott, C. C., Verheije, M. H., Mercer, J., Moese, S., Heger, T., Theusner, K., Jurgeit, A., Lamparter, D., Balistreri, G., Schelhaas, M., De Haan, C. A. M., Marjomaki, V., Hyypia, T., Rottier, P. J. M., Sodeik, B., Marsh, M., Gruenberg, J., Amara, A., Greber, U., Helenius, A., and Pelkmans, L. (2012) Single-cell analysis of population context advances RNAi screening at multiple levels. Mol. Syst. Biol. 8, 579
-
(2012)
Mol. Syst. Biol.
, vol.8
, pp. 579
-
-
Snijder, B.1
Sacher, R.2
Ramo, P.3
Liberali, P.4
Mench, K.5
Wolfrum, N.6
Burleigh, L.7
Scott, C.C.8
Verheije, M.H.9
Mercer, J.10
Moese, S.11
Heger, T.12
Theusner, K.13
Jurgeit, A.14
Lamparter, D.15
Balistreri, G.16
Schelhaas, M.17
De Haan, C.A.M.18
Marjomaki, V.19
Hyypia, T.20
Rottier, P.J.M.21
Sodeik, B.22
Marsh, M.23
Gruenberg, J.24
Amara, A.25
Greber, U.26
Helenius, A.27
Pelkmans, L.28
more..
-
60
-
-
84931006688
-
DNA methyltransferase DNMT3A associates with viral proteins and impacts HSV-1 infection
-
Rowles, D. L., Tsai, Y. C., Greco, T. M., Lin, A. E., Li, M., Yeh, J., and Cristea, I. M. (2015) DNA methyltransferase DNMT3A associates with viral proteins and impacts HSV-1 infection. Proteomics 15, 1968-1982
-
(2015)
Proteomics
, vol.15
, pp. 1968-1982
-
-
Rowles, D.L.1
Tsai, Y.C.2
Greco, T.M.3
Lin, A.E.4
Li, M.5
Yeh, J.6
Cristea, I.M.7
-
61
-
-
84887091401
-
A proteomic perspective of inbuilt viral protein regulation: PUL46 tegument protein is targeted for degradation by ICP0 during herpes simplex virus type 1 infection
-
Lin, A. E., Greco, T. M., Döhner, K., Sodeik, B., and Cristea, I. M. (2013) A proteomic perspective of inbuilt viral protein regulation: pUL46 tegument protein is targeted for degradation by ICP0 during herpes simplex virus type 1 infection. Mol. Cell. Proteomics 12, 3237-3252
-
(2013)
Mol. Cell. Proteomics
, vol.12
, pp. 3237-3252
-
-
Lin, A.E.1
Greco, T.M.2
Döhner, K.3
Sodeik, B.4
Cristea, I.M.5
-
62
-
-
29244474603
-
Fluorescent proteins as proteomic probes
-
Cristea, I. M., Williams, R., Chait, B. T., and Rout, M. P. (2005) Fluorescent proteins as proteomic probes. Mol. Cell. Proteomics 4, 1933-1941
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1933-1941
-
-
Cristea, I.M.1
Williams, R.2
Chait, B.T.3
Rout, M.P.4
-
63
-
-
84895538371
-
Minimal, encapsulated proteomic-sample processing applied to copynumber estimation in eukaryotic cells
-
Kulak, N. a, Pichler, G., Paron, I., Nagaraj, N., and Mann, M. (2014) Minimal, encapsulated proteomic-sample processing applied to copynumber estimation in eukaryotic cells. Nat. Methods 11, 319-324
-
(2014)
Nat. Methods
, vol.11
, pp. 319-324
-
-
Kulak, N.A.1
Pichler, G.2
Paron, I.3
Nagaraj, N.4
Mann, M.5
-
64
-
-
84976871411
-
2016 update of the PRIDE database and its related tools
-
Vizcaíno, J. A., Csordas, A., Del-Toro, N., Dianes, J. A., Griss, J., Lavidas, I., Mayer, G., Perez-Riverol, Y., Reisinger, F., Ternent, T., Xu, Q. W., Wang, R., and Hermjakob, H. (2016) 2016 update of the PRIDE database and its related tools. Nucleic Acids Res. 44, D447-D56
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D447-D456
-
-
Vizcaíno, J.A.1
Csordas, A.2
Del-Toro, N.3
Dianes, J.A.4
Griss, J.5
Lavidas, I.6
Mayer, G.7
Perez-Riverol, Y.8
Reisinger, F.9
Ternent, T.10
Xu, Q.W.11
Wang, R.12
Hermjakob, H.13
-
65
-
-
31644446949
-
Absolute quantification of proteins by LCMSE: A virtue of parallel MS acquisition
-
Silva, J. C., Gorenstein, M. V., Li, G. Z., Vissers, J. P. C., and Geromanos, S. J. (2006) Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition. Mol. Cell. Proteomics 5, 144-156
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 144-156
-
-
Silva, J.C.1
Gorenstein, M.V.2
Li, G.Z.3
Vissers, J.P.C.4
Geromanos, S.J.5
-
66
-
-
84881455143
-
Mentha: A resource for browsing integrated protein-interaction networks
-
Calderone, A., Castagnoli, L., and Cesareni, G. (2013) mentha: a resource for browsing integrated protein-interaction networks. Nat. Methods 10, 690- 691
-
(2013)
Nat. Methods
, vol.10
, pp. 690-691
-
-
Calderone, A.1
Castagnoli, L.2
Cesareni, G.3
-
67
-
-
84891773554
-
Negatome 2.0: A database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis
-
Blohm, P., Frishman, G., Smialowski, P., Goebels, F., Wachinger, B., Ruepp, A., and Frishman, D. (2014) Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis. Nucleic Acids Res. 42, D396-D400
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D396-D400
-
-
Blohm, P.1
Frishman, G.2
Smialowski, P.3
Goebels, F.4
Wachinger, B.5
Ruepp, A.6
Frishman, D.7
-
68
-
-
84883755242
-
Topology of molecular interaction networks
-
Winterbach, W., Van Mieghem, P., Reinders, M., Wang, H., and de Ridder, D. (2013) Topology of molecular interaction networks. BMC Syst. Biol. 7, 90
-
(2013)
BMC Syst. Biol.
, vol.7
, pp. 90
-
-
Winterbach, W.1
Van Mieghem, P.2
Reinders, M.3
Wang, H.4
De Ridder, D.5
-
69
-
-
79954617024
-
Fusing structure and function: A structural view of the herpesvirus entry machinery
-
Connolly, S. A., Jackson, J. O., Jardetzky, T. S., and Longnecker, R. (2011) Fusing structure and function: a structural view of the herpesvirus entry machinery. Nat. Rev. Microbiol. 9, 369-381
-
(2011)
Nat. Rev. Microbiol.
, vol.9
, pp. 369-381
-
-
Connolly, S.A.1
Jackson, J.O.2
Jardetzky, T.S.3
Longnecker, R.4
-
70
-
-
79960400096
-
The herpes simplex virus 1 UL17 protein is the second constituent of the capsid vertex-specific component required for DNA packaging and retention
-
Toropova, K., Huffman, J. B., Homa, F. L., and Conway, J. F. (2011) The herpes simplex virus 1 UL17 protein is the second constituent of the capsid vertex-specific component required for DNA packaging and retention. J. Virol. 85, 7513-7522
-
(2011)
J. Virol.
, vol.85
, pp. 7513-7522
-
-
Toropova, K.1
Huffman, J.B.2
Homa, F.L.3
Conway, J.F.4
-
71
-
-
0028783737
-
Herpes simplex virus capsids assembled in insect cells infected with recombinant baculoviruses: Structural authenticity and localization of VP26
-
Trus, B. L., Homa, F. L., Booy, F. P., Newcomb, W. W., Thomsen, D. R., Cheng, N., Brown, J. C., and Steven, A. C. (1995) Herpes simplex virus capsids assembled in insect cells infected with recombinant baculoviruses: structural authenticity and localization of VP26. J. Virol. 69, 7362-7366
-
(1995)
J. Virol.
, vol.69
, pp. 7362-7366
-
-
Trus, B.L.1
Homa, F.L.2
Booy, F.P.3
Newcomb, W.W.4
Thomsen, D.R.5
Cheng, N.6
Brown, J.C.7
Steven, A.C.8
-
72
-
-
84861375995
-
The UL36 tegument protein of herpes simplex virus 1 has a composite binding site at the capsid vertices
-
Cardone, G., Newcomb, W. W., Cheng, N., Wingfield, P. T., Trus, B. L., Brown, J. C., and Steven, A. C. (2012) The UL36 Tegument Protein of Herpes Simplex Virus 1 Has a Composite Binding Site at the Capsid Vertices. J. Virol. 86, 4058-4064
-
(2012)
J. Virol.
, vol.86
, pp. 4058-4064
-
-
Cardone, G.1
Newcomb, W.W.2
Cheng, N.3
Wingfield, P.T.4
Trus, B.L.5
Brown, J.C.6
Steven, A.C.7
-
73
-
-
0028804828
-
Assembly of VP26 in herpes simplex virus-1 inferred from structures of wild-type and recombinant capsids
-
Zhou, Z. H., He, J., Jakana, J., Tatman, J. D., Rixon, F. J., and Chiu, W. (1995) Assembly of VP26 in herpes simplex virus-1 inferred from structures of wild-type and recombinant capsids. Nat. Struct. Biol. 2, 1026-1030
-
(1995)
Nat. Struct. Biol
, vol.2
, pp. 1026-1030
-
-
Zhou, Z.H.1
He, J.2
Jakana, J.3
Tatman, J.D.4
Rixon, F.J.5
Chiu, W.6
-
74
-
-
3142545772
-
Herpes simplex virus type 1 capsid protein VP26 Interacts with dynein light chains RP3 and Tctex1 and plays a role in retrograde cellular transport
-
Douglas, M. W., Diefenbach, R. J., Homa, F. L., Miranda-Saksena, M., Rixon, F. J., Vittone, V., Byth, K., and Cunningham, A. L. (2004) Herpes Simplex Virus Type 1 Capsid Protein VP26 Interacts with Dynein Light Chains RP3 and Tctex1 and Plays a Role in Retrograde Cellular Transport. J. Biol. Chem. 279, 28522-28530
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 28522-28530
-
-
Douglas, M.W.1
Diefenbach, R.J.2
Homa, F.L.3
Miranda-Saksena, M.4
Rixon, F.J.5
Vittone, V.6
Byth, K.7
Cunningham, A.L.8
-
75
-
-
84923138880
-
The herpes simplex virus 1 UL51 protein interacts with the UL7 protein and plays a role in its recruitment into the Virion
-
Roller, R. J., and Fetters, R. (2015) The Herpes Simplex Virus 1 UL51 Protein Interacts with the UL7 Protein and Plays a Role in Its Recruitment into the Virion. J. Virol. 89, 3112-3122
-
(2015)
J. Virol.
, vol.89
, pp. 3112-3122
-
-
Roller, R.J.1
Fetters, R.2
-
76
-
-
33746853425
-
Eclipse phase of herpes simplex virus type 1 infection: Efficient dynein-mediated capsid transport without the small capsid protein VP26
-
Döhner, K., Radtke, K., Schmidt, S., and Sodeik, B. (2006) Eclipse phase of herpes simplex virus type 1 infection: Efficient dynein-mediated capsid transport without the small capsid protein VP26. J. Virol. 80, 8211-8224
-
(2006)
J. Virol.
, vol.80
, pp. 8211-8224
-
-
Döhner, K.1
Radtke, K.2
Schmidt, S.3
Sodeik, B.4
-
77
-
-
77951952127
-
The power of protein interaction networks for associating genes with diseases
-
Navlakha, S., and Kingsford, C. (2010) The power of protein interaction networks for associating genes with diseases. Bioinformatics 26, 1057-1063
-
(2010)
Bioinformatics
, vol.26
, pp. 1057-1063
-
-
Navlakha, S.1
Kingsford, C.2
-
78
-
-
77954783207
-
Inferring modules from human protein interactome classes
-
Marras, E., Travaglione, A., Chaurasia, G., Futschik, M., and Capobianco, E. (2010) Inferring modules from human protein interactome classes. BMC Syst. Biol. 4, 102
-
(2010)
BMC Syst. Biol.
, vol.4
, pp. 102
-
-
Marras, E.1
Travaglione, A.2
Chaurasia, G.3
Futschik, M.4
Capobianco, E.5
-
79
-
-
67649663886
-
Yeast two-hybrid, a powerful tool for systems biology
-
Brückner, A., Polge, C., Lentze, N., Auerbach, D., and Schlattner, U. (2009) Yeast two-hybrid, a powerful tool for systems biology. Int. J. Mol. Sci. 10, 2763-2788
-
(2009)
Int. J. Mol. Sci.
, vol.10
, pp. 2763-2788
-
-
Brückner, A.1
Polge, C.2
Lentze, N.3
Auerbach, D.4
Schlattner, U.5
-
80
-
-
0034628508
-
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
-
Uetz, P., Giot, L., Cagney, G., Mansfield, T. A., Judson, R. S., Knight, J. R., Lockshon, D., Narayan, V., Srinivasan, M., Pochart, P., Qureshi-Emili, A., Li, Y., Godwin, B., Conover, D., Kalbfleisch, T., Vijayadamodar, G., Yang, M., Johnston, M., Fields, S., and Rothberg, J. M. (2000) A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature 403, 623- 627
-
(2000)
Nature
, vol.403
, pp. 623-627
-
-
Uetz, P.1
Giot, L.2
Cagney, G.3
Mansfield, T.A.4
Judson, R.S.5
Knight, J.R.6
Lockshon, D.7
Narayan, V.8
Srinivasan, M.9
Pochart, P.10
Qureshi-Emili, A.11
Li, Y.12
Godwin, B.13
Conover, D.14
Kalbfleisch, T.15
Vijayadamodar, G.16
Yang, M.17
Johnston, M.18
Fields, S.19
Rothberg, J.M.20
more..
-
81
-
-
0036733722
-
Treasures and traps in genome-wide data sets: Case examples from yeast
-
Grünenfelder, B., and Winzeler, E. A. (2002) Treasures and traps in genome-wide data sets: case examples from yeast. Nat. Rev. Genet. 3, 653-661
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 653-661
-
-
Grünenfelder, B.1
Winzeler, E.A.2
-
82
-
-
77956321519
-
Exhaustive benchmarking of the yeast two-hybrid system
-
Chen, Y. C., Rajagopala, S. V., Stellberger, T., and Uetz, P. (2010) Exhaustive benchmarking of the yeast two-hybrid system. Nat. Methods 7, 667-668
-
(2010)
Nat. Methods
, vol.7
, pp. 667-668
-
-
Chen, Y.C.1
Rajagopala, S.V.2
Stellberger, T.3
Uetz, P.4
-
83
-
-
0037432528
-
How reliable are experimental protein-protein interaction data? J
-
Sprinzak, E., Sattath, S., and Margalit, H. (2003) How reliable are experimental protein-protein interaction data? J. Mol. Biol. 327, 919-923
-
(2003)
Mol. Biol.
, vol.327
, pp. 919-923
-
-
Sprinzak, E.1
Sattath, S.2
Margalit, H.3
-
84
-
-
55549112567
-
Localization of herpes simplex virus type 1 UL37 in the Golgi complex requires UL36 but not capsid structures
-
Desai, P., Sexton, G. L., Huang, E., and Person, S. (2008) Localization of herpes simplex virus type 1 UL37 in the Golgi complex requires UL36 but not capsid structures. J. Virol. 82, 11354-11361
-
(2008)
J. Virol.
, vol.82
, pp. 11354-11361
-
-
Desai, P.1
Sexton, G.L.2
Huang, E.3
Person, S.4
-
85
-
-
40149086016
-
Nuclear egress and envelopment of herpes simplex virus capsids analyzed with dual-color fluorescence HSV1(17ô)
-
Nagel, C. H., Döhner, K., Fathollahy, M., Strive, T., Borst, E. M., Messerle, M., and Sodeik, B. (2008) Nuclear egress and envelopment of herpes simplex virus capsids analyzed with dual-color fluorescence HSV1(17ô). J. Virol. 82, 3109-3124
-
(2008)
J. Virol.
, vol.82
, pp. 3109-3124
-
-
Nagel, C.H.1
Döhner, K.2
Fathollahy, M.3
Strive, T.4
Borst, E.M.5
Messerle, M.6
Sodeik, B.7
-
86
-
-
43249128165
-
Live visualization of herpes simplex virus type 1 compartment dynamics
-
de Oliveira, A. P., Glauser, D. L., Laimbacher, A. S., Strasser, R., Schraner, E. M., Wild, P., Ziegler, U., Breakefield, X. O., Ackermann, M., and Fraefel, C. (2008) Live visualization of herpes simplex virus type 1 compartment dynamics. J. Virol. 82, 4974-4990
-
(2008)
J. Virol.
, vol.82
, pp. 4974-4990
-
-
De Oliveira, A.P.1
Glauser, D.L.2
Laimbacher, A.S.3
Strasser, R.4
Schraner, E.M.5
Wild, P.6
Ziegler, U.7
Breakefield, X.O.8
Ackermann, M.9
Fraefel, C.10
-
87
-
-
43949089146
-
Simultaneous tracking of capsid, tegument, and envelope protein localization in living cells infected with triply fluorescent herpes simplex virus 1
-
Sugimoto, K., Uema, M., Sagara, H., Tanaka, M., Sata, T., Hashimoto, Y., and Kawaguchi, Y. (2008) Simultaneous tracking of capsid, tegument, and envelope protein localization in living cells infected with triply fluorescent herpes simplex virus 1. J. Virol. 82, 5198-5211
-
(2008)
J. Virol.
, vol.82
, pp. 5198-5211
-
-
Sugimoto, K.1
Uema, M.2
Sagara, H.3
Tanaka, M.4
Sata, T.5
Hashimoto, Y.6
Kawaguchi, Y.7
-
88
-
-
0037213596
-
Residues of VP26 of herpes simplex virus type 1 that are required for its interaction with capsids
-
Desai, P., Akpa, J. C., and Person, S. (2003) Residues of VP26 of herpes simplex virus type 1 that are required for its interaction with capsids. J. Virol. 77, 391-404
-
(2003)
J. Virol.
, vol.77
, pp. 391-404
-
-
Desai, P.1
Akpa, J.C.2
Person, S.3
-
89
-
-
33646750547
-
The Herpesvirus capsid surface protein, VP26, and the majority of the tegument proteins are dispensable for capsid transport toward the nucleus
-
Antinone, S. E., Shubeita, G. T., Coller, K. E., Lee, J. I., Haverlock-Moyns, S., Gross, S. P., and Smith, G. A. (2006) The Herpesvirus capsid surface protein, VP26, and the majority of the tegument proteins are dispensable for capsid transport toward the nucleus. J. Virol. 80, 5494-5498
-
(2006)
J. Virol.
, vol.80
, pp. 5494-5498
-
-
Antinone, S.E.1
Shubeita, G.T.2
Coller, K.E.3
Lee, J.I.4
Haverlock-Moyns, S.5
Gross, S.P.6
Smith, G.A.7
-
90
-
-
0031846233
-
Incorporation of the green fluorescent protein into the herpes simplex virus type 1 capsid
-
Desai, P., and Person, S. (1998) Incorporation of the green fluorescent protein into the herpes simplex virus type 1 capsid. J. Virol. 72, 7563-7568
-
(1998)
J. Virol.
, vol.72
, pp. 7563-7568
-
-
Desai, P.1
Person, S.2
-
91
-
-
45949096784
-
Deletion or green fluorescent protein tagging of the pUL35 capsid component of pseudorabies virus impairs virus replication in cell culture and neuroinvasion in mice
-
Krautwald, M., Maresch, C., Klupp, B. G., Fuchs, W., and Mettenleiter, T. C. (2008) Deletion or green fluorescent protein tagging of the pUL35 capsid component of pseudorabies virus impairs virus replication in cell culture and neuroinvasion in mice. J. Gen. Virol. 89, 1346-1351
-
(2008)
J. Gen. Virol.
, vol.89
, pp. 1346-1351
-
-
Krautwald, M.1
Maresch, C.2
Klupp, B.G.3
Fuchs, W.4
Mettenleiter, T.C.5
-
92
-
-
84929625422
-
Function of the herpes simplex virus 1 small capsid protein VP26 is regulated by phosphorylation at a specific site
-
Kobayashi, R., Kato, A., Oda, S., Koyanagi, N., Oyama, M., Kozuka-Hata, H., Arii, J., and Kawaguchi, Y. (2015) Function of the Herpes Simplex Virus 1 Small Capsid Protein VP26 Is Regulated by Phosphorylation at a Specific Site. J. Virol. 89, 6141-6147
-
(2015)
J. Virol.
, vol.89
, pp. 6141-6147
-
-
Kobayashi, R.1
Kato, A.2
Oda, S.3
Koyanagi, N.4
Oyama, M.5
Kozuka-Hata, H.6
Arii, J.7
Kawaguchi, Y.8
-
93
-
-
77957652501
-
Plus- and minus-end directed microtubule motors bind simultaneously to herpes simplex virus capsids using different inner tegument structures
-
Radtke, K., Kieneke, D., Wolfstein, A., Michael, K., Steffen, W., Scholz, T., Karger, A., and Sodeik, B. (2010) Plus- and minus-end directed microtubule motors bind simultaneously to herpes simplex virus capsids using different inner tegument structures. PLoS Pathog. 6, 1-20
-
(2010)
PLoS Pathog
, vol.6
, pp. 1-20
-
-
Radtke, K.1
Kieneke, D.2
Wolfstein, A.3
Michael, K.4
Steffen, W.5
Scholz, T.6
Karger, A.7
Sodeik, B.8
-
94
-
-
84883422214
-
The smallest capsid protein mediates binding of the essential tegument protein pp150 to stabilize DNA-containing capsids in human cytomegalovirus
-
Dai, X., Yu, X., Gong, H., Jiang, X., Abenes, G., Liu, H., Shivakoti, S., Britt, W. J., Zhu, H., Liu, F., and Zhou, Z. H. (2013) The smallest capsid protein mediates binding of the essential tegument protein pp150 to stabilize DNA-containing capsids in human cytomegalovirus. PLoS Pathog. 9, e1003525
-
(2013)
PLoS Pathog
, vol.9
, pp. e1003525
-
-
Dai, X.1
Yu, X.2
Gong, H.3
Jiang, X.4
Abenes, G.5
Liu, H.6
Shivakoti, S.7
Britt, W.J.8
Zhu, H.9
Liu, F.10
Zhou, Z.H.11
-
95
-
-
84923308126
-
CryoEM and mutagenesis reveal that the smallest capsid protein cements and stabilizes Kaposi's sarcoma-associated herpesvirus capsid
-
Dai, X., Gong, D., Xiao, Y., Wu, T.-T., Sun, R., and Zhou, Z. H. (2015) CryoEM and mutagenesis reveal that the smallest capsid protein cements and stabilizes Kaposi's sarcoma-associated herpesvirus capsid. Proc. Natl. Acad. Sci. U.S.A. 112, E649-E56
-
(2015)
Proc. Natl. Acad. Sci. U. S. A
, vol.112
, pp. E649-E6456
-
-
Dai, X.1
Gong, D.2
Xiao, Y.3
Wu, T.-T.4
Sun, R.5
Zhou, Z.H.6
-
96
-
-
0028261190
-
Finding a needle in a haystack: Detection of a small protein (the 12-kDa VP26) in a large complex (the 200-MDa capsid of herpes simplex virus)
-
Booy, F. P., Trus, B. L., Newcomb, W. W., Brown, J. C., Conway, J. F., and Steven, A. C. (1994) Finding a needle in a haystack: detection of a small protein (the 12-kDa VP26) in a large complex (the 200-MDa capsid of herpes simplex virus). Proc. Natl. Acad. Sci. U.S.A. 91, 5652-5656
-
(1994)
Proc. Natl. Acad. Sci. U. S. A
, vol.91
, pp. 5652-5656
-
-
Booy, F.P.1
Trus, B.L.2
Newcomb, W.W.3
Brown, J.C.4
Conway, J.F.5
Steven, A.C.6
-
97
-
-
0035162989
-
The pattern of tegument-capsid interaction in the herpes simplex virus type 1 virion is not influenced by the small hexon-associated protein VP26
-
Chen, D. H., Jakana, J., McNab, D., Mitchell, J., Zhou, Z. H., Dougherty, M., Chiu, W., and Rixon, F. J. (2001) The pattern of tegument-capsid interaction in the herpes simplex virus type 1 virion is not influenced by the small hexon-associated protein VP26. J. Virol. 75, 11863-11867
-
(2001)
J. Virol.
, vol.75
, pp. 11863-11867
-
-
Chen, D.H.1
Jakana, J.2
McNab, D.3
Mitchell, J.4
Zhou, Z.H.5
Dougherty, M.6
Chiu, W.7
Rixon, F.J.8
-
98
-
-
84895427394
-
Association of herpes simplex virus pUL31 with capsid vertices and components of the capsid vertex-specific complex
-
Yang, K., Wills, E., Lim, H. Y., Zhou, Z. H., and Baines, J. D. (2014) Association of herpes simplex virus pUL31 with capsid vertices and components of the capsid vertex-specific complex. J. Virol. 88, 3815-3825
-
(2014)
J. Virol.
, vol.88
, pp. 3815-3825
-
-
Yang, K.1
Wills, E.2
Lim, H.Y.3
Zhou, Z.H.4
Baines, J.D.5
-
99
-
-
0034892972
-
U(L)31 and U(L)34 proteins of herpes simplex virus type 1 form a complex that accumulates at the nuclear rim and is required for envelopment of nucleocapsids
-
Reynolds, A. E., Ryckman, B. J., Baines, J. D., Zhou, Y., Liang, L., and Roller, R. J. (2001) U(L)31 and U(L)34 proteins of herpes simplex virus type 1 form a complex that accumulates at the nuclear rim and is required for envelopment of nucleocapsids. J. Virol. 75, 8803-8817
-
(2001)
J. Virol.
, vol.75
, pp. 8803-8817
-
-
Reynolds, A.E.1
Ryckman, B.J.2
Baines, J.D.3
Zhou, Y.4
Liang, L.5
Roller, R.J.6
-
100
-
-
65349186030
-
The U(L)31 and U(L)34 gene products of herpes simplex virus 1 are required for optimal localization of viral glycoproteins D and M to the inner nuclear membranes of infected cells
-
Wills, E., Mou, F., and Baines, J. D. (2009) The U(L)31 and U(L)34 gene products of herpes simplex virus 1 are required for optimal localization of viral glycoproteins D and M to the inner nuclear membranes of infected cells. J. Virol. 83, 4800- 4809
-
(2009)
J. Virol.
, vol.83
, pp. 4800-4809
-
-
Wills, E.1
Mou, F.2
Baines, J.D.3
-
101
-
-
33751234823
-
Common and specific properties of herpesvirus UL34/UL31 protein family members revealed by protein complementation assay
-
Schnee, M., Ruzsics, Z., Bubeck, A., and Koszinowski, U. H. (2006) Common and specific properties of herpesvirus UL34/UL31 protein family members revealed by protein complementation assay. J. Virol. 80, 11658-11666
-
(2006)
J. Virol.
, vol.80
, pp. 11658-11666
-
-
Schnee, M.1
Ruzsics, Z.2
Bubeck, A.3
Koszinowski, U.H.4
-
102
-
-
84936774563
-
The herpes simplex virus protein pUL31 escorts nucleocapsids to sites of nuclear egress, a process coordinated by Its N-Terminal domain
-
Funk, C., Ott, M., Raschbichler, V., Nagel, C. H., Binz, A., Sodeik, B., Bauerfeind, R., and Bailer, S. M. (2015) The Herpes Simplex Virus Protein pUL31 Escorts Nucleocapsids to Sites of Nuclear Egress, a Process Coordinated by Its N-Terminal Domain. PLoS Pathog. 11, e1004957
-
(2015)
PLoS Pathog
, vol.11
, pp. e1004957
-
-
Funk, C.1
Ott, M.2
Raschbichler, V.3
Nagel, C.H.4
Binz, A.5
Sodeik, B.6
Bauerfeind, R.7
Bailer, S.M.8
-
103
-
-
84950262686
-
Structural basis of vesicle formation at the inner nuclear membrane
-
Hagen, C., Dent, K. C., Zeev-Ben-Mordehai, T., Grange, M., Bosse, J. B., Whittle, C., Klupp, B. G., Siebert, C. A., Vasishtan, D., Bäuerlein, F. J. B., Cheleski, J., Werner, S., Guttmann, P., Rehbein, S., Henzler, K., Demmerle, J., Adler, B., Koszinowski, U., Schermelleh, L., Schneider, G., Enquist, L. W., Plitzko, J. M., Mettenleiter, T. C., and Grünewald, K. (2015) Structural Basis of Vesicle Formation at the Inner Nuclear Membrane. Cell 163, 1692-1701
-
(2015)
Cell
, vol.163
, pp. 1692-1701
-
-
Hagen, C.1
Dent, K.C.2
Zeev-Ben-Mordehai, T.3
Grange, M.4
Bosse, J.B.5
Whittle, C.6
Klupp, B.G.7
Siebert, C.A.8
Vasishtan, D.9
Bäuerlein, F.J.B.10
Cheleski, J.11
Werner, S.12
Guttmann, P.13
Rehbein, S.14
Henzler, K.15
Demmerle, J.16
Adler, B.17
Koszinowski, U.18
Schermelleh, L.19
Schneider, G.20
Enquist, L.W.21
Plitzko, J.M.22
Mettenleiter, T.C.23
Grünewald, K.24
more..
-
104
-
-
84950245174
-
Crystal Structure of the Herpesvirus Nuclear Egress Complex Provides Insights into Inner Nuclear Membrane Remodeling
-
Zeev-Ben-Mordehai, T., Weberruô, M., Lorenz, M., Cheleski, J., Hellberg, T., Whittle, C., El Omari, K., Vasishtan, D., Dent, K. C., Harlos, K., Franzke, K., Hagen, C., Klupp, B. G., Antonin, W., Mettenleiter, T. C., and Grünewald, K. (2015) Crystal Structure of the Herpesvirus Nuclear Egress Complex Provides Insights into Inner Nuclear Membrane Remodeling. Cell Rep. 13, 2645-2652
-
(2015)
Cell Rep
, vol.13
, pp. 2645-2652
-
-
Zeev-Ben-Mordehai, T.1
Weberruô, M.2
Lorenz, M.3
Cheleski, J.4
Hellberg, T.5
Whittle, C.6
El Omari, K.7
Vasishtan, D.8
Dent, K.C.9
Harlos, K.10
Franzke, K.11
Hagen, C.12
Klupp, B.G.13
Antonin, W.14
Mettenleiter, T.C.15
Grünewald, K.16
-
105
-
-
0028557489
-
Ribonucleotide reductase of herpesviruses
-
Conner, J., Marsden, H., and Clements, J. B. (1994) Ribonucleotide reductase of herpesviruses. Rev. Med. Virol. 4, 25-34
-
(1994)
Rev. Med. Virol.
, vol.4
, pp. 25-34
-
-
Conner, J.1
Marsden, H.2
Clements, J.B.3
-
106
-
-
80052277727
-
The ribonucleotide reductase R1 subunits of herpes simplex virus 1 and 2 protect cells against poly(I ô C)-induced apoptosis
-
Dufour, F., Bertrand, L., Pearson, A., Grandvaux, N., and Langelier, Y. (2011) The ribonucleotide reductase R1 subunits of herpes simplex virus 1 and 2 protect cells against poly(I ô C)-induced apoptosis. J. Virol. 85, 8689- 8701
-
(2011)
J. Virol.
, vol.85
, pp. 8689-8701
-
-
Dufour, F.1
Bertrand, L.2
Pearson, A.3
Grandvaux, N.4
Langelier, Y.5
-
107
-
-
33747090604
-
Ribonucleotide reductase inhibitors as anti-herpes agents
-
Wnuk, S. F., and Robins, M. J. (2006) Ribonucleotide reductase inhibitors as anti-herpes agents. Antiviral Res. 71, 122-126
-
(2006)
Antiviral Res.
, vol.71
, pp. 122-126
-
-
Wnuk, S.F.1
Robins, M.J.2
-
108
-
-
0037526521
-
The R1 subunit of herpes simplex virus ribonucleotide reductase has chaperone-like activity similar to Hsp27
-
Chabaud, S., Lambert, H., Sasseville, A. M. J., Lavoie, H., Guilbault, C., Massie, B., Landry, J., and Langelier, Y. (2003) The R1 subunit of herpes simplex virus ribonucleotide reductase has chaperone-like activity similar to Hsp27. FEBS Lett. 545, 213-218
-
(2003)
FEBS Lett.
, vol.545
, pp. 213-218
-
-
Chabaud, S.1
Lambert, H.2
Sasseville, A.M.J.3
Lavoie, H.4
Guilbault, C.5
Massie, B.6
Landry, J.7
Langelier, Y.8
-
109
-
-
0036843525
-
The R1 subunit of herpes simplex virus ribonucleotide reductase protects cells against apoptosis at, or upstream of, caspase-8 activation
-
Langelier, Y., Bergeron, S., Chabaud, S., Lippens, J., Guilbault, C., Sasseville, A. M. J., Denis, S., Mosser, D. D., and Massie, B. (2002) The R1 subunit of herpes simplex virus ribonucleotide reductase protects cells against apoptosis at, or upstream of, caspase-8 activation. J. Gen. Virol. 83, 2779-2789
-
(2002)
J. Gen. Virol.
, vol.83
, pp. 2779-2789
-
-
Langelier, Y.1
Bergeron, S.2
Chabaud, S.3
Lippens, J.4
Guilbault, C.5
Sasseville, A.M.J.6
Denis, S.7
Mosser, D.D.8
Massie, B.9
-
110
-
-
33846794626
-
The ribonucleotide reductase domain of the R1 subunit of herpes simplex virus type 2 ribonucleotide reductase is essential for R1 antiapoptotic function
-
Chabaud, S., Sasseville, A. M. J., Elahi, S. M., Caron, A., Dufour, F., Massie, B., and Langelier, Y. (2007) The ribonucleotide reductase domain of the R1 subunit of herpes simplex virus type 2 ribonucleotide reductase is essential for R1 antiapoptotic function. J. Gen. Virol. 88, 384-394
-
(2007)
J. Gen. Virol.
, vol.88
, pp. 384-394
-
-
Chabaud, S.1
Sasseville, A.M.J.2
Elahi, S.M.3
Caron, A.4
Dufour, F.5
Massie, B.6
Langelier, Y.7
-
111
-
-
84929948113
-
Manipulation of apoptosis and necroptosis signaling by herpesviruses
-
Guo, H., Kaiser, W. J., and Mocarski, E. S. (2015) Manipulation of apoptosis and necroptosis signaling by herpesviruses. Med. Microbiol. Immunol. 204, 439-448
-
(2015)
Med. Microbiol. Immunol
, vol.204
, pp. 439-448
-
-
Guo, H.1
Kaiser, W.J.2
Mocarski, E.S.3
-
112
-
-
0033928112
-
Evidence for controlled incorporation of herpes simplex virus type 1 UL26 protease into capsids
-
Sheaffer, A. K., Newcomb, W. W., Brown, J. C., Gao, M., Weller, S. K., and Tenney, D. J. (2000) Evidence for controlled incorporation of herpes simplex virus type 1 UL26 protease into capsids. J. Virol. 74, 6838-6848
-
(2000)
J. Virol.
, vol.74
, pp. 6838-6848
-
-
Sheaffer, A.K.1
Newcomb, W.W.2
Brown, J.C.3
Gao, M.4
Weller, S.K.5
Tenney, D.J.6
-
113
-
-
0029019922
-
Assembly of the herpes simplex virus capsid: Requirement for the carboxyl-terminal twenty-five amino acids of the proteins encoded by the UL26 and UL26.5 genes
-
Thomsen, D. R., Newcomb, W. W., Brown, J. C., and Homa, F. L. (1995) Assembly of the herpes simplex virus capsid: requirement for the carboxyl-terminal twenty-five amino acids of the proteins encoded by the UL26 and UL26.5 genes. J. Virol. 69, 3690-3703
-
(1995)
J. Virol.
, vol.69
, pp. 3690-3703
-
-
Thomsen, D.R.1
Newcomb, W.W.2
Brown, J.C.3
Homa, F.L.4
-
114
-
-
84919431403
-
The Putative Herpes Simplex Virus 1 Chaperone Protein UL32 modulates disulfide bond formation during infection
-
Albright, B. S., Kosinski, A., Szczepaniak, R., Cook, E. a, Stow, N. D., Conway, J. F., and Weller, S. K. (2015) The Putative Herpes Simplex Virus 1 Chaperone Protein UL32 Modulates Disulfide Bond Formation during Infection. J. Virol. 89, 443- 453
-
(2015)
J. Virol.
, vol.89
, pp. 443-453
-
-
Albright, B.S.1
Kosinski, A.2
Szczepaniak, R.3
Cook, E.A.4
Stow, N.D.5
Conway, J.F.6
Weller, S.K.7
-
115
-
-
35148896264
-
Pseudorabies virus Us9 directs axonal sorting of viral capsids
-
Lyman, M. G., Feierbach, B., Curanovic, D., Bisher, M., and Enquist, L. W. (2007) Pseudorabies virus Us9 directs axonal sorting of viral capsids. J. Virol. 81, 11363-11371
-
(2007)
J. Virol.
, vol.81
, pp. 11363-11371
-
-
Lyman, M.G.1
Feierbach, B.2
Curanovic, D.3
Bisher, M.4
Enquist, L.W.5
-
116
-
-
55249103906
-
Herpes simplex virus gE/gI and US9 proteins promote transport of both capsids and virion glycoproteins in neuronal axons
-
Snyder, A., Polcicova, K., and Johnson, D. C. (2008) Herpes simplex virus gE/gI and US9 proteins promote transport of both capsids and virion glycoproteins in neuronal axons. J. Virol. 82, 10613-10624
-
(2008)
J. Virol.
, vol.82
, pp. 10613-10624
-
-
Snyder, A.1
Polcicova, K.2
Johnson, D.C.3
-
117
-
-
0035921429
-
A conserved alpha-herpesvirus protein necessary for axonal localization of viral membrane proteins
-
Tomishima, M. J., and Enquist, L. W. (2001) A conserved alpha-herpesvirus protein necessary for axonal localization of viral membrane proteins. J. Cell Biol. 154, 741-752
-
(2001)
J. Cell Biol.
, vol.154
, pp. 741-752
-
-
Tomishima, M.J.1
Enquist, L.W.2
-
118
-
-
34248583632
-
Allosteric Signaling and a Nuclear Exit Strategy: Binding of UL25/UL17 Heterodimers to DNA-Filled HSV-1 Capsids
-
Trus, B. L., Newcomb, W. W., Cheng, N., Cardone, G., Marekov, L., Homa, F. L., Brown, J. C., and Steven, A. C. (2007) Allosteric Signaling and a Nuclear Exit Strategy: Binding of UL25/UL17 Heterodimers to DNA-Filled HSV-1 Capsids. Mol. Cell 26, 479- 489
-
(2007)
Mol. Cell
, vol.26
, pp. 479-489
-
-
Trus, B.L.1
Newcomb, W.W.2
Cheng, N.3
Cardone, G.4
Marekov, L.5
Homa, F.L.6
Brown, J.C.7
Steven, A.C.8
-
119
-
-
35448946916
-
The capsid and tegument of the alphaherpesviruses are linked by an interaction between the UL25 and VP1/2 proteins
-
Coller, K. E., Lee, J. I. H., Ueda, A., and Smith, G. A. (2007) The capsid and tegument of the alphaherpesviruses are linked by an interaction between the UL25 and VP1/2 proteins. J. Virol. 81, 11790-11797
-
(2007)
J. Virol.
, vol.81
, pp. 11790-11797
-
-
Coller, K.E.1
Lee, J.I.H.2
Ueda, A.3
Smith, G.A.4
-
120
-
-
84861163767
-
Alphaherpesvirus infection disrupts mitochondrial transport in neurons
-
Kramer, T., and Enquist, L. W. (2012) Alphaherpesvirus infection disrupts mitochondrial transport in neurons. Cell. Host Microbe 11, 504-514
-
(2012)
Cell. Host Microbe
, vol.11
, pp. 504-514
-
-
Kramer, T.1
Enquist, L.W.2
-
121
-
-
77954385082
-
Crystal structure of the conserved herpesvirus fusion regulator complex gH-gL
-
Chowdary, T. K., Cairns, T. M., Atanasiu, D., Cohen, G. H., Eisenberg, R. J., and Heldwein, E. E. (2010) Crystal structure of the conserved herpesvirus fusion regulator complex gH-gL. Nat. Struct. Mol. Biol. 17, 882-888
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 882-888
-
-
Chowdary, T.K.1
Cairns, T.M.2
Atanasiu, D.3
Cohen, G.H.4
Eisenberg, R.J.5
Heldwein, E.E.6
-
122
-
-
84874657339
-
Stuck in the middle: Structural insights into the role of the gH/gL heterodimer in herpesvirus entry
-
Stampfer, S. D., and Heldwein, E. E. (2013) Stuck in the middle: structural insights into the role of the gH/gL heterodimer in herpesvirus entry. Curr. Opin. Virol. 3, 13-19
-
(2013)
Curr. Opin. Virol.
, vol.3
, pp. 13-19
-
-
Stampfer, S.D.1
Heldwein, E.E.2
-
123
-
-
84861569576
-
Herpes virus fusion and entry: A story with many characters
-
Eisenberg, R. J., Atanasiu, D., Cairns, T. M., Gallagher, J. R., Krummenacher, C., and Cohen, G. H. (2012) Herpes virus fusion and entry: a story with many characters. Viruses 4, 800-832
-
(2012)
Viruses
, vol.4
, pp. 800-832
-
-
Eisenberg, R.J.1
Atanasiu, D.2
Cairns, T.M.3
Gallagher, J.R.4
Krummenacher, C.5
Cohen, G.H.6
-
124
-
-
14744275220
-
Functional analysis of the pseudorabies virus UL51 protein
-
Klupp, B. G., Granzow, H., Klopfleisch, R., Fuchs, W., Kopp, M., Lenk, M., and Mettenleiter, T. C. (2005) Functional analysis of the pseudorabies virus UL51 protein. J. Virol. 79, 3831-3840
-
(2005)
J. Virol.
, vol.79
, pp. 3831-3840
-
-
Klupp, B.G.1
Granzow, H.2
Klopfleisch, R.3
Fuchs, W.4
Kopp, M.5
Lenk, M.6
Mettenleiter, T.C.7
-
125
-
-
0032424034
-
Identification and characterization of the herpes simplex virus type 1 UL51 gene product
-
Daikoku, T., Ikenoya, K., Yamada, H., Goshima, F., and Nishiyama, Y. (1998) Identification and characterization of the herpes simplex virus type 1 UL51 gene product. J. Gen. Virol. 79, 3027-3031
-
(1998)
J. Gen. Virol.
, vol.79
, pp. 3027-3031
-
-
Daikoku, T.1
Ikenoya, K.2
Yamada, H.3
Goshima, F.4
Nishiyama, Y.5
-
126
-
-
0031010137
-
The pseudorabies virus UL51 gene product is a 30-kilodalton virion component
-
Lenk, M., Visser, N., and Mettenleiter, T. C. (1997) The pseudorabies virus UL51 gene product is a 30-kilodalton virion component. J. Virol. 71, 5635-5638
-
(1997)
J. Virol.
, vol.71
, pp. 5635-5638
-
-
Lenk, M.1
Visser, N.2
Mettenleiter, T.C.3
-
127
-
-
18744413267
-
Herpes simplex virus type 1 UL51 protein is involved in maturation and egress of virus particles
-
Nozawa, N., Kawaguchi, Y., Tanaka, M., Kato, A., Kato, A., Kimura, H., and Nishiyama, Y. (2005) Herpes simplex virus type 1 UL51 protein is involved in maturation and egress of virus particles. J. Virol. 79, 6947-6956
-
(2005)
J. Virol.
, vol.79
, pp. 6947-6956
-
-
Nozawa, N.1
Kawaguchi, Y.2
Tanaka, M.3
Kato, A.4
Kato, A.5
Kimura, H.6
Nishiyama, Y.7
-
128
-
-
84896969898
-
The herpes simplex virus 1 UL51 gene product has cell type-specific functions in cell-to-cell spread
-
Roller, R. J., Haugo, A. C., Yang, K., and Baines, J. D. (2014) The Herpes Simplex Virus 1 UL51 Gene Product Has Cell Type-Specific Functions in Cell-to-Cell Spread. J. Virol. 88, 4058-4068
-
(2014)
J. Virol.
, vol.88
, pp. 4058-4068
-
-
Roller, R.J.1
Haugo, A.C.2
Yang, K.3
Baines, J.D.4
-
129
-
-
1542377535
-
Simultaneous deletion of pseudorabies virus tegument protein UL11 and glycoprotein M severely impairs secondary envelopment
-
Kopp, M., Granzow, H., Fuchs, W., Klupp, B., and Mettenleiter, T. C. (2004) Simultaneous deletion of pseudorabies virus tegument protein UL11 and glycoprotein M severely impairs secondary envelopment. J. Virol. 78, 3024-3034
-
(2004)
J. Virol.
, vol.78
, pp. 3024-3034
-
-
Kopp, M.1
Granzow, H.2
Fuchs, W.3
Klupp, B.4
Mettenleiter, T.C.5
-
130
-
-
58149502561
-
Effects of simultaneous deletion of pUL11 and glycoprotein M on virion maturation of herpes simplex virus type 1
-
Leege, T., Fuchs, W., Granzow, H., Kopp, M., Klupp, B. G., and Mettenleiter, T. C. (2009) Effects of simultaneous deletion of pUL11 and glycoprotein M on virion maturation of herpes simplex virus type 1. J. Virol. 83, 896-907
-
(2009)
J. Virol.
, vol.83
, pp. 896-907
-
-
Leege, T.1
Fuchs, W.2
Granzow, H.3
Kopp, M.4
Klupp, B.G.5
Mettenleiter, T.C.6
-
131
-
-
36348978139
-
Dynamic interactions of the UL16 tegument protein with the capsid of herpes simplex virus
-
Meckes, D. G., and Wills, J. W. (2007) Dynamic interactions of the UL16 tegument protein with the capsid of herpes simplex virus. J. Virol. 81, 13028-13036
-
(2007)
J. Virol.
, vol.81
, pp. 13028-13036
-
-
Meckes, D.G.1
Wills, J.W.2
-
132
-
-
55249090937
-
Analysis of the interaction between the UL11 and UL16 tegument proteins of herpes simplex virus
-
Yeh, P. C., Meckes, D. G., and Wills, J. W. (2008) Analysis of the interaction between the UL11 and UL16 tegument proteins of herpes simplex virus. J. Virol. 82, 10693-10700
-
(2008)
J. Virol.
, vol.82
, pp. 10693-10700
-
-
Yeh, P.C.1
Meckes, D.G.2
Wills, J.W.3
-
133
-
-
0344080584
-
The pseudorabies virus UL11 protein is a virion component involved in secondary envelopment in the cytoplasm
-
Kopp, M., Granzow, H., Fuchs, W., Klupp, B. G., Mundt, E., Karger, A., and Mettenleiter, T. C. (2003) The pseudorabies virus UL11 protein is a virion component involved in secondary envelopment in the cytoplasm. J. Virol. 77, 5339-5351
-
(2003)
J. Virol.
, vol.77
, pp. 5339-5351
-
-
Kopp, M.1
Granzow, H.2
Fuchs, W.3
Klupp, B.G.4
Mundt, E.5
Karger, A.6
Mettenleiter, T.C.7
-
134
-
-
0142092454
-
Binding partners for the UL11 tegument protein of herpes simplex virus type 1
-
Loomis, J. S., Courtney, R. J., and Wills, J. W. (2003) Binding partners for the UL11 tegument protein of herpes simplex virus type 1. J. Virol. 77, 11417-11424
-
(2003)
J. Virol.
, vol.77
, pp. 11417-11424
-
-
Loomis, J.S.1
Courtney, R.J.2
Wills, J.W.3
|