-
1
-
-
0023066040
-
Experimental toxicology of formaldehyde
-
Bolt, H. M. (1987) Experimental toxicology of formaldehyde. J. Cancer Res. Clin. Oncol. 113, 305-309
-
(1987)
J. Cancer Res. Clin. Oncol.
, vol.113
, pp. 305-309
-
-
Bolt, H.M.1
-
2
-
-
84964330823
-
Formaldehyde stress responses in bacterial pathogens
-
Chen, N. H., Djoko, K. Y., Veyrier, F. J., and McEwan, A. G. (2016) Formaldehyde stress responses in bacterial pathogens. Front. Microbiol. 7, 257
-
(2016)
Front. Microbiol.
, vol.7
, pp. 257
-
-
Chen, N.H.1
Djoko, K.Y.2
Veyrier, F.J.3
McEwan, A.G.4
-
3
-
-
0029780981
-
Formaldehyde mechanistic data and risk assessment: Endogenous protection from DNA adduct formation
-
Conaway, C. C., Whysner, J., Verna, L. K., and Williams, G. M. (1996) Formaldehyde mechanistic data and risk assessment: endogenous protection from DNA adduct formation. Pharmacol. Ther. 71, 29-55
-
(1996)
Pharmacol. Ther.
, vol.71
, pp. 29-55
-
-
Conaway, C.C.1
Whysner, J.2
Verna, L.K.3
Williams, G.M.4
-
4
-
-
0015543341
-
Reactions of nucleic acids and nucleoproteins with formaldehyde
-
Feldman, M. Y. (1973) Reactions of nucleic acids and nucleoproteins with formaldehyde. Prog. Nucleic Acid Res. Mol. Biol. 13, 1-49
-
(1973)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.13
, pp. 1-49
-
-
Feldman, M.Y.1
-
5
-
-
0023881799
-
Review of the genotoxicity of formaldehyde
-
Ma, T. H., and Harris, M. M. (1988) Review of the genotoxicity of formaldehyde. Mutat. Res. 196, 37-59
-
(1988)
Mutat. Res.
, vol.196
, pp. 37-59
-
-
Ma, T.H.1
Harris, M.M.2
-
6
-
-
70349538975
-
The expanding world of methylotrophic metabolism
-
Chistoserdova, L., Kalyuzhnaya, M. G., and Lidstrom, M. E. (2009) The expanding world of methylotrophic metabolism. Annu. Rev. Microbiol. 63, 477-499
-
(2009)
Annu. Rev. Microbiol.
, vol.63
, pp. 477-499
-
-
Chistoserdova, L.1
Kalyuzhnaya, M.G.2
Lidstrom, M.E.3
-
8
-
-
0036042189
-
Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria
-
Vorholt, J. A. (2002) Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria. Arch. Microbiol. 178, 239-249
-
(2002)
Arch. Microbiol.
, vol.178
, pp. 239-249
-
-
Vorholt, J.A.1
-
9
-
-
31444449061
-
Assimilation, dissimilation, and detoxification of formaldehyde, a central metabolic intermediate of methylotrophic metabolism
-
Yurimoto, H., Kato, N., and Sakai, Y. (2005) Assimilation, dissimilation, and detoxification of formaldehyde, a central metabolic intermediate of methylotrophic metabolism. Chem. Rec. 5, 367-375
-
(2005)
Chem. Rec.
, vol.5
, pp. 367-375
-
-
Yurimoto, H.1
Kato, N.2
Sakai, Y.3
-
10
-
-
0016310845
-
Purification and properties of 3-hexulose phosphate synthase and phospho-3-hexuloisomerase from Methylococcus capsulatus
-
Ferenci, T., Strom, T., and Quayle, J. R. (1974) Purification and properties of 3-hexulose phosphate synthase and phospho-3-hexuloisomerase from Methylococcus capsulatus. Biochem. J. 144, 477- 486
-
(1974)
Biochem J.
, vol.144
, pp. 477-486
-
-
Ferenci, T.1
Strom, T.2
Quayle, J.R.3
-
11
-
-
0345097575
-
Formaldehydedetoxifying role of the tetrahydromethanopterin-linked pathway in Methylobacterium extorquens AM1
-
Marx, C. J., Chistoserdova, L., and Lidstrom, M. E. (2003) Formaldehydedetoxifying role of the tetrahydromethanopterin-linked pathway in Methylobacterium extorquens AM1. J. Bacteriol. 185, 7160-7168
-
(2003)
J. Bacteriol.
, vol.185
, pp. 7160-7168
-
-
Marx, C.J.1
Chistoserdova, L.2
Lidstrom, M.E.3
-
12
-
-
1642310209
-
Multiple formaldehyde oxidation/detoxification pathways in Burkholderia fungorum LB400
-
Marx, C. J., Miller, J. A., Chistoserdova, L., and Lidstrom, M. E. (2004) Multiple formaldehyde oxidation/detoxification pathways in Burkholderia fungorum LB400. J. Bacteriol. 186, 2173-2178
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2173-2178
-
-
Marx, C.J.1
Miller, J.A.2
Chistoserdova, L.3
Lidstrom, M.E.4
-
13
-
-
84877315338
-
Heme degradation by Staphylococcus aureus IsdG and IsdI liberates formaldehyde rather than carbon monoxide
-
Matsui, T., Nambu, S., Ono, Y., Goulding, C. W., Tsumoto, K., and Ikeda-Saito, M. (2013) Heme degradation by Staphylococcus aureus IsdG and IsdI liberates formaldehyde rather than carbon monoxide. Biochemistry 52, 3025-3027
-
(2013)
Biochemistry
, vol.52
, pp. 3025-3027
-
-
Matsui, T.1
Nambu, S.2
Ono, Y.3
Goulding, C.W.4
Tsumoto, K.5
Ikeda-Saito, M.6
-
14
-
-
84954132670
-
Time-resolved studies of IsdG protein identify molecular signposts along the non-canonical heme oxygenase pathway
-
Streit, B. R., Kant, R., Tokmina-Lukaszewska, M., Celis, A. I., Machovina, M. M., Skaar, E. P., Bothner, B., and DuBois, J. L. (2016) Time-resolved studies of IsdG protein identify molecular signposts along the non-canonical heme oxygenase pathway. J. Biol. Chem. 291, 862-871
-
(2016)
J. Biol. Chem.
, vol.291
, pp. 862-871
-
-
Streit, B.R.1
Kant, R.2
Tokmina-Lukaszewska, M.3
Celis, A.I.4
Machovina, M.M.5
Skaar, E.P.6
Bothner, B.7
DuBois, J.L.8
-
15
-
-
84937074210
-
Adaptation of anaerobic cultures of Escherichia coli K-12 in response to environmental trimethylamine-N-oxide
-
Denby, K. J., Rolfe, M. D., Crick, E., Sanguinetti, G., Poole, R. K., and Green, J. (2015) Adaptation of anaerobic cultures of Escherichia coli K-12 in response to environmental trimethylamine-N-oxide. Environ. Microbiol. 17, 2477-2491
-
(2015)
Environ. Microbiol.
, vol.17
, pp. 2477-2491
-
-
Denby, K.J.1
Rolfe, M.D.2
Crick, E.3
Sanguinetti, G.4
Poole, R.K.5
Green, J.6
-
16
-
-
0021361665
-
The autoxidation of glyceraldehyde and other simple monosaccharides under physiological conditions catalysed by buffer ions
-
Thornalley, P., Wolff, S., Crabbe, J., and Stern, A. (1984) The autoxidation of glyceraldehyde and other simple monosaccharides under physiological conditions catalysed by buffer ions. Biochim. Biophys. Acta 797, 276-287
-
(1984)
Biochim. Biophys. Acta
, vol.797
, pp. 276-287
-
-
Thornalley, P.1
Wolff, S.2
Crabbe, J.3
Stern, A.4
-
17
-
-
0037068446
-
Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage
-
Trewick, S. C., Henshaw, T. F., Hausinger, R. P., Lindahl, T., and Sedgwick, B. (2002) Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage. Nature 419, 174-178
-
(2002)
Nature
, vol.419
, pp. 174-178
-
-
Trewick, S.C.1
Henshaw, T.F.2
Hausinger, R.P.3
Lindahl, T.4
Sedgwick, B.5
-
18
-
-
0027454552
-
The glyoxalase system in health and disease
-
Thornalley, P. J. (1993) The glyoxalase system in health and disease. Mol. Aspects Med. 14, 287-371
-
(1993)
Mol. Aspects Med.
, vol.14
, pp. 287-371
-
-
Thornalley, P.J.1
-
19
-
-
0029967019
-
S-Formylglutathione hydrolase of Paracoccus denitrificans is homologous to human esterase D: A universal pathway for formaldehyde detoxification?
-
Harms, N., Ras, J., Reijnders, W. N., van Spanning, R. J., and Stouthamer, A. H. (1996) S-Formylglutathione hydrolase of Paracoccus denitrificans is homologous to human esterase D: a universal pathway for formaldehyde detoxification? J. Bacteriol. 178, 6296- 6299
-
(1996)
J. Bacteriol.
, vol.178
, pp. 6296-6299
-
-
Harms, N.1
Ras, J.2
Reijnders, W.N.3
Van Spanning, R.J.4
Stouthamer, A.H.5
-
20
-
-
0036479312
-
A glutathione-dependent formaldehyde-activating enzyme (Gfa) from Paracoccus denitrificans detected and purified via two-dimensional proton exchange NMR spectroscopy
-
Goenrich, M., Bartoschek, S., Hagemeier, C. H., Griesinger, C., and Vorholt, J. A. (2002) A glutathione-dependent formaldehyde-activating enzyme (Gfa) from Paracoccus denitrificans detected and purified via two-dimensional proton exchange NMR spectroscopy. J. Biol. Chem. 277, 3069-3072
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 3069-3072
-
-
Goenrich, M.1
Bartoschek, S.2
Hagemeier, C.H.3
Griesinger, C.4
Vorholt, J.A.5
-
21
-
-
38849088680
-
Identification of proteins involved in formaldehyde metabolism by Rhodobacter sphaeroides
-
Wilson, S. M., Gleisten, M. P., and Donohue, T. J. (2008) Identification of proteins involved in formaldehyde metabolism by Rhodobacter sphaeroides. Microbiology 154, 296-305
-
(2008)
Microbiology
, vol.154
, pp. 296-305
-
-
Wilson, S.M.1
Gleisten, M.P.2
Donohue, T.J.3
-
22
-
-
0016326180
-
Purification and properties of S-formylglutathione hydrolase from human liver
-
Uotila, L., and Koivusalo, M. (1974) Purification and properties of S-formylglutathione hydrolase from human liver. J. Biol. Chem. 249, 7664-7672
-
(1974)
J. Biol. Chem.
, vol.249
, pp. 7664-7672
-
-
Uotila, L.1
Koivusalo, M.2
-
23
-
-
0025760370
-
Demonstration of formaldehyde dehydrogenase activity in formaldehyde-resistant Enterobacteriaceae
-
Kaulfers, P. M., and Marquardt, A. (1991) Demonstration of formaldehyde dehydrogenase activity in formaldehyde-resistant Enterobacteriaceae. FEMS Microbiol. Lett. 63, 335-338
-
(1991)
FEMS Microbiol. Lett.
, vol.63
, pp. 335-338
-
-
Kaulfers, P.M.1
Marquardt, A.2
-
24
-
-
0027326638
-
Cephalopod alcohol dehydrogenase: Purification and enzymatic characterization
-
Rosario Fernández, M., Jörnvall, H., Moreno, A., Kaiser, R., and Parés, X. (1993) Cephalopod alcohol dehydrogenase: purification and enzymatic characterization. FEBS Lett. 328, 235-238
-
(1993)
FEBS Lett.
, vol.328
, pp. 235-238
-
-
Fernández, R.1
Jörnvall, H.2
Moreno, A.3
Kaiser, R.4
Parés, X.5
-
25
-
-
0030823068
-
Induction of glutathione-dependent formaldehyde dehydrogenase activity in Escherichia coli and Hemophilus influenza
-
Gutheil, W. G., Kasimoglu, E., and Nicholson, P. C. (1997) Induction of glutathione-dependent formaldehyde dehydrogenase activity in Escherichia coli and Hemophilus influenza. Biochem. Biophys. Res. Commun. 238, 693-696
-
(1997)
Biochem. Biophys. Res. Commun.
, vol.238
, pp. 693-696
-
-
Gutheil, W.G.1
Kasimoglu, E.2
Nicholson, P.C.3
-
26
-
-
4944228604
-
Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR
-
Herring, C. D., and Blattner, F. R. (2004) Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. 186, 6714-6720
-
(2004)
J. Bacteriol.
, vol.186
, pp. 6714-6720
-
-
Herring, C.D.1
Blattner, F.R.2
-
27
-
-
33744938480
-
Molecular basis of formaldehyde detoxification: Characterization of two S-formylglutathione hydrolases from Escherichia coli, FrmB and YeiG
-
Gonzalez, C. F., Proudfoot, M., Brown, G., Korniyenko, Y., Mori, H., Savchenko, A. V., and Yakunin, A. F. (2006) Molecular basis of formaldehyde detoxification: characterization of two S-formylglutathione hydrolases from Escherichia coli, FrmB and YeiG. J. Biol. Chem. 281, 14514-14522
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 14514-14522
-
-
Gonzalez, C.F.1
Proudfoot, M.2
Brown, G.3
Korniyenko, Y.4
Mori, H.5
Savchenko, A.V.6
Yakunin, A.F.7
-
28
-
-
0023047634
-
Formaldehyde metabolism by Escherichia coli: Detection by in vivo carbon-13 NMR spectroscopy of S-(hydroxymethyl)glutathione as a transient intracellular intermediate
-
Mason, R. P., Sanders, J. K. M., Crawford, A., and Hunter, B. K. (1986) Formaldehyde metabolism by Escherichia coli: detection by in vivo carbon-13 NMR spectroscopy of S-(hydroxymethyl)glutathione as a transient intracellular intermediate. Biochemistry 25, 4504-4507
-
(1986)
Biochemistry
, vol.25
, pp. 4504-4507
-
-
Mason, R.P.1
Sanders, J.K.M.2
Crawford, A.3
Hunter, B.K.4
-
29
-
-
0016343668
-
Formaldehyde dehydrogenase from human liver: Purification, properties, and evidence for the formation of glutathione thiol esters by the enzyme
-
Uotila, L., and Koivusalo, M. (1974) Formaldehyde dehydrogenase from human liver: purification, properties, and evidence for the formation of glutathione thiol esters by the enzyme. J. Biol. Chem. 249, 7653-7663
-
(1974)
J. Biol. Chem.
, vol.249
, pp. 7653-7663
-
-
Uotila, L.1
Koivusalo, M.2
-
30
-
-
84891810747
-
Insights into protein allostery in the CsoR/RcnR family of transcriptional repressors
-
Higgins, K. A., and Giedroc, D. (2014) Insights into protein allostery in the CsoR/RcnR family of transcriptional repressors. Chem. Lett. 43, 20-25
-
(2014)
Chem. Lett.
, vol.43
, pp. 20-25
-
-
Higgins, K.A.1
Giedroc, D.2
-
31
-
-
33845736364
-
CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator
-
Liu, T., Ramesh, A., Ma, Z., Ward, S. K., Zhang, L., George, G. N., Talaat, A. M., Sacchettini, J. C., and Giedroc, D. P. (2007) CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator. Nat. Chem. Biol. 3, 60-68
-
(2007)
Nat. Chem. Biol.
, vol.3
, pp. 60-68
-
-
Liu, T.1
Ramesh, A.2
Ma, Z.3
Ward, S.K.4
Zhang, L.5
George, G.N.6
Talaat, A.M.7
Sacchettini, J.C.8
Giedroc, D.P.9
-
32
-
-
33748666848
-
Nickel homeostasis in Escherichia coli: The rcnR-rcnA efflux pathway and its linkage to NikR function
-
Iwig, J. S., Rowe, J. L., and Chivers, P. T. (2006) Nickel homeostasis in Escherichia coli: the rcnR-rcnA efflux pathway and its linkage to NikR function. Mol. Microbiol. 62, 252-262
-
(2006)
Mol. Microbiol.
, vol.62
, pp. 252-262
-
-
Iwig, J.S.1
Rowe, J.L.2
Chivers, P.T.3
-
33
-
-
0038579429
-
The MerR family of transcriptional regulators
-
Brown, N. L., Stoyanov, J. V., Kidd, S. P., and Hobman, J. L. (2003) The MerR family of transcriptional regulators. FEMS Microbiol. Rev. 27, 145-163
-
(2003)
FEMS Microbiol. Rev.
, vol.27
, pp. 145-163
-
-
Brown, N.L.1
Stoyanov, J.V.2
Kidd, S.P.3
Hobman, J.L.4
-
34
-
-
34248669001
-
Functional specialization within the Fur family of metalloregulators
-
Lee, J. W., and Helmann, J. D. (2007) Functional specialization within the Fur family of metalloregulators. Biometals 20, 485-499
-
(2007)
Biometals
, vol.20
, pp. 485-499
-
-
Lee, J.W.1
Helmann, J.D.2
-
35
-
-
77952000337
-
Bacterial metal-sensing proteins exemplified by ArsR-SmtB family repressors
-
Osman, D., and Cavet, J. S. (2010) Bacterial metal-sensing proteins exemplified by ArsR-SmtB family repressors. Nat. Prod. Rep. 27, 668-680
-
(2010)
Nat. Prod. Rep.
, vol.27
, pp. 668-680
-
-
Osman, D.1
Cavet, J.S.2
-
36
-
-
24944453275
-
Structural determinants of metal selectivity in prokaryotic metal-responsive transcriptional regulators
-
Pennella, M. A., and Giedroc, D. P. (2005) Structural determinants of metal selectivity in prokaryotic metal-responsive transcriptional regulators. Biometals 18, 413-428
-
(2005)
Biometals
, vol.18
, pp. 413-428
-
-
Pennella, M.A.1
Giedroc, D.P.2
-
37
-
-
84885049877
-
Functional and expression analysis of the metal-inducible dmeRF system from Rhizobium leguminosarum bv. Viciae
-
Rubio-Sanz, L., Prieto, R. I., Imperial, J., Palacios, J. M., and Brito, B. (2013) Functional and expression analysis of the metal-inducible dmeRF system from Rhizobium leguminosarum bv. viciae. Appl. Environ. Microbiol. 79, 6414-6422
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 6414-6422
-
-
Rubio-Sanz, L.1
Prieto, R.I.2
Imperial, J.3
Palacios, J.M.4
Brito, B.5
-
38
-
-
78650251930
-
A novel copper-responsive regulon in Mycobacterium tuberculosis
-
Festa, R. A., Jones, M. B., Butler-Wu, S., Sinsimer, D., Gerads, R., Bishai, W. R., Peterson, S. N., and Darwin, K. H. (2011) A novel copper-responsive regulon in Mycobacterium tuberculosis. Mol. Microbiol. 79, 133-148
-
(2011)
Mol. Microbiol.
, vol.79
, pp. 133-148
-
-
Festa, R.A.1
Jones, M.B.2
Butler-Wu, S.3
Sinsimer, D.4
Gerads, R.5
Bishai, W.R.6
Peterson, S.N.7
Darwin, K.H.8
-
39
-
-
84859510164
-
Cytosolic Ni(II) sensor in cyanobacterium: Nickel detection follows nickel affinity across four families of metal sensors
-
Foster, A. W., Patterson, C. J., Pernil, R., Hess, C. R., and Robinson, N. J. (2012) Cytosolic Ni(II) sensor in cyanobacterium: nickel detection follows nickel affinity across four families of metal sensors. J. Biol. Chem. 287, 12142-12151
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 12142-12151
-
-
Foster, A.W.1
Patterson, C.J.2
Pernil, R.3
Hess, C.R.4
Robinson, N.J.5
-
40
-
-
79953892242
-
Control of copper resistance and inorganic sulfur metabolism by paralogous regulators in Staphylococcus aureus
-
Grossoehme, N., Kehl-Fie, T. E., Ma, Z., Adams, K. W., Cowart, D. M., Scott, R. A., Skaar, E. P., and Giedroc, D. P. (2011) Control of copper resistance and inorganic sulfur metabolism by paralogous regulators in Staphylococcus aureus. J. Biol. Chem. 286, 13522-13531
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 13522-13531
-
-
Grossoehme, N.1
Kehl-Fie, T.E.2
Ma, Z.3
Adams, K.W.4
Cowart, D.M.5
Scott, R.A.6
Skaar, E.P.7
Giedroc, D.P.8
-
41
-
-
84879565056
-
Selenite and tellurite form mixed seleno- and telluro-trisulfides with CstR from Staphylococcus aureus
-
Luebke, J. L., Arnold, R. J., and Giedroc, D. P. (2013) Selenite and tellurite form mixed seleno- and telluro-trisulfides with CstR from Staphylococcus aureus. Metallomics 5, 335-342
-
(2013)
Metallomics
, vol.5
, pp. 335-342
-
-
Luebke, J.L.1
Arnold, R.J.2
Giedroc, D.P.3
-
42
-
-
84883489593
-
Backbone resonance assignments of the homotetrameric (48 kD) copper sensor CsoR from Geobacillus thermodenitrificans in the apo- and Cu(I)-bound states: Insights into copper-mediated allostery
-
Coyne, H. J., 3rd, and Giedroc, D. P. (2013) Backbone resonance assignments of the homotetrameric (48 kD) copper sensor CsoR from Geobacillus thermodenitrificans in the apo- and Cu(I)-bound states: insights into copper-mediated allostery. Biomol. NMR Assign. 7, 279-283
-
(2013)
Biomol. NMR Assign.
, vol.7
, pp. 279-283
-
-
Coyne, H.J.1
Giedroc, D.P.2
-
43
-
-
84861206687
-
Response to copper stress in Streptomyces lividans extends beyond genes under direct control of a copper-sensitive operon repressor protein (CsoR)
-
Dwarakanath, S., Chaplin, A. K., Hough, M. A., Rigali, S., Vijgenboom, E., and Worrall, J. A. (2012) Response to copper stress in Streptomyces lividans extends beyond genes under direct control of a copper-sensitive operon repressor protein (CsoR). J. Biol. Chem. 287, 17833-17847
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 17833-17847
-
-
Dwarakanath, S.1
Chaplin, A.K.2
Hough, M.A.3
Rigali, S.4
Vijgenboom, E.5
Worrall, J.A.6
-
44
-
-
77954574615
-
Structural and functional characterization of the transcriptional repressor CsoR from Thermus thermophilus HB8
-
Sakamoto, K., Agari, Y., Agari, K., Kuramitsu, S., and Shinkai, A. (2010) Structural and functional characterization of the transcriptional repressor CsoR from Thermus thermophilus HB8. Microbiology 156, 1993-2005
-
(2010)
Microbiology
, vol.156
, pp. 1993-2005
-
-
Sakamoto, K.1
Agari, Y.2
Agari, K.3
Kuramitsu, S.4
Shinkai, A.5
-
45
-
-
84903822857
-
Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR)
-
Chang, F. M., Coyne, H. J., Cubillas, C., Vinuesa, P., Fang, X., Ma, Z., Ma, D., Helmann, J. D., García-de los Santos, A., Wang, Y. X., Dann, C. E., 3rd, and Giedroc, D. P. (2014) Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR). J. Biol. Chem. 289, 19204-19217
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 19204-19217
-
-
Chang, F.M.1
Coyne, H.J.2
Cubillas, C.3
Vinuesa, P.4
Fang, X.5
Ma, Z.6
Ma, D.7
Helmann, J.D.8
García-De Los Santos, A.9
Wang, Y.X.10
Dann, C.E.11
Giedroc, D.P.12
-
46
-
-
45249113233
-
Ni(II) and Co(II) sensing by Escherichia coli RcnR
-
Iwig, J. S., Leitch, S., Herbst, R. W., Maroney, M. J., and Chivers, P. T. (2008) Ni(II) and Co(II) sensing by Escherichia coli RcnR. J. Am. Chem. Soc. 130, 7592-7606
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 7592-7606
-
-
Iwig, J.S.1
Leitch, S.2
Herbst, R.W.3
Maroney, M.J.4
Chivers, P.T.5
-
47
-
-
0026512376
-
Purification, characterization, and partial sequence of the glutathione-dependent formaldehyde dehydrogenase from Escherichia coli: A class III alcohol dehydrogenase
-
Gutheil, W. G., Holmquist, B., and Vallee, B. L. (1992) Purification, characterization, and partial sequence of the glutathione-dependent formaldehyde dehydrogenase from Escherichia coli: a class III alcohol dehydrogenase. Biochemistry 31, 475- 481
-
(1992)
Biochemistry
, vol.31
, pp. 475-481
-
-
Gutheil, W.G.1
Holmquist, B.2
Vallee, B.L.3
-
48
-
-
64049087476
-
Exploring the antimicrobial action of a carbon monoxide-releasing compound through whole-genome transcription profiling of Escherichia coli
-
Nobre, L. S., Al-Shahrour, F., Dopazo, J., and Saraiva, L. M. (2009) Exploring the antimicrobial action of a carbon monoxide-releasing compound through whole-genome transcription profiling of Escherichia coli. Microbiology 155, 813-824
-
(2009)
Microbiology
, vol.155
, pp. 813-824
-
-
Nobre, L.S.1
Al-Shahrour, F.2
Dopazo, J.3
Saraiva, L.M.4
-
49
-
-
70349422232
-
Transcriptomic response of Escherichia coli O157:H7 to oxidative stress
-
Wang, S., Deng, K., Zaremba, S., Deng, X., Lin, C., Wang, Q., Tortorello, M. L., and Zhang, W. (2009) Transcriptomic response of Escherichia coli O157:H7 to oxidative stress. Appl. Environ. Microbiol. 75, 6110-6123
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 6110-6123
-
-
Wang, S.1
Deng, K.2
Zaremba, S.3
Deng, X.4
Lin, C.5
Wang, Q.6
Tortorello, M.L.7
Zhang, W.8
-
50
-
-
84939138598
-
Generating a metalresponsive transcriptional regulator to test what confers metal sensing in cells
-
Osman, D., Piergentili, C., Chen, J., Chakrabarti, B., Foster, A. W., Lurie-Luke, E., Huggins, T. G., and Robinson, N. J. (2015) Generating a metalresponsive transcriptional regulator to test what confers metal sensing in cells. J. Biol. Chem. 290, 19806-19822
-
(2015)
J. Biol. Chem.
, vol.290
, pp. 19806-19822
-
-
Osman, D.1
Piergentili, C.2
Chen, J.3
Chakrabarti, B.4
Foster, A.W.5
Lurie-Luke, E.6
Huggins, T.G.7
Robinson, N.J.8
-
51
-
-
22144480660
-
HxlR, a member of the DUF24 protein family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis
-
Yurimoto, H., Hirai, R., Matsuno, N., Yasueda, H., Kato, N., and Sakai, Y. (2005) HxlR, a member of the DUF24 protein family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis. Mol. Microbiol. 57, 511-519
-
(2005)
Mol. Microbiol.
, vol.57
, pp. 511-519
-
-
Yurimoto, H.1
Hirai, R.2
Matsuno, N.3
Yasueda, H.4
Kato, N.5
Sakai, Y.6
-
52
-
-
25144450560
-
NmlR of Neisseria gonorrhoeae: A novel redox responsive transcription factor from the MerR family
-
Kidd, S. P., Potter, A. J., Apicella, M. A., Jennings, M. P., and McEwan, A. G. (2005) NmlR of Neisseria gonorrhoeae: a novel redox responsive transcription factor from the MerR family. Mol. Microbiol. 57, 1676-1689
-
(2005)
Mol. Microbiol.
, vol.57
, pp. 1676-1689
-
-
Kidd, S.P.1
Potter, A.J.2
Apicella, M.A.3
Jennings, M.P.4
McEwan, A.G.5
-
53
-
-
84864334279
-
A glutathione-based system for defense against carbonyl stress in Haemophilus influenzae
-
Kidd, S. P., Jiang, D., Tikhomirova, A., Jennings, M. P., and McEwan, A. G. (2012) A glutathione-based system for defense against carbonyl stress in Haemophilus influenzae. BMC Microbiol. 12, 159
-
(2012)
BMC Microbiol.
, vol.12
, pp. 159
-
-
Kidd, S.P.1
Jiang, D.2
Tikhomirova, A.3
Jennings, M.P.4
McEwan, A.G.5
-
54
-
-
39149119282
-
A pneumococcal MerR-like regulator and S-nitrosoglutathione reductase are required for systemic virulence
-
Stroeher, U. H., Kidd, S. P., Stafford, S. L., Jennings, M. P., Paton, J. C., and McEwan, A. G. (2007) A pneumococcal MerR-like regulator and S-nitrosoglutathione reductase are required for systemic virulence. J. Infect. Dis. 196, 1820-1826
-
(2007)
J. Infect. Dis.
, vol.196
, pp. 1820-1826
-
-
Stroeher, U.H.1
Kidd, S.P.2
Stafford, S.L.3
Jennings, M.P.4
Paton, J.C.5
McEwan, A.G.6
-
55
-
-
79959692852
-
Novel bacterial MerR-like regulators their role in the response to carbonyl and nitrosative stress
-
McEwan, A. G., Djoko, K. Y., Chen, N. H., Couñago, R. L., Kidd, S. P., Potter, A. J., and Jennings, M. P. (2011) Novel bacterial MerR-like regulators their role in the response to carbonyl and nitrosative stress. Adv. Microb. Physiol. 58, 1-22
-
(2011)
Adv. Microb. Physiol.
, vol.58
, pp. 1-22
-
-
McEwan, A.G.1
Djoko, K.Y.2
Chen, N.H.3
Couñago, R.L.4
Kidd, S.P.5
Potter, A.J.6
Jennings, M.P.7
-
56
-
-
84872963993
-
A glutathione-dependent detoxification system is required for formaldehyde resistance and optimal survival of Neisseria meningitidis in biofilms
-
Chen, N. H., Couñago, R. M., Djoko, K. Y., Jennings, M. P., Apicella, M. A., Kobe, B., and McEwan, A. G. (2013) A glutathione-dependent detoxification system is required for formaldehyde resistance and optimal survival of Neisseria meningitidis in biofilms. Antioxid. Redox. Signal. 18, 743-755
-
(2013)
Antioxid. Redox. Signal.
, vol.18
, pp. 743-755
-
-
Chen, N.H.1
Couñago, R.M.2
Djoko, K.Y.3
Jennings, M.P.4
Apicella, M.A.5
Kobe, B.6
McEwan, A.G.7
-
57
-
-
0017242079
-
Genetic relatedness in the family Enterobacteriaceae
-
Sanderson, K. E. (1976) Genetic relatedness in the family Enterobacteriaceae. Annu. Rev. Microbiol. 30, 327-349
-
(1976)
Annu. Rev. Microbiol.
, vol.30
, pp. 327-349
-
-
Sanderson, K.E.1
-
58
-
-
0034671842
-
Comparison of the Escherichia coli K-12 genome with sampled genomes of a Klebsiella pneumoniae and three Salmonella enterica serovars, Typhimurium, Typhi and Paratyphi
-
McClelland, M., Florea, L., Sanderson, K., Clifton, S. W., Parkhill, J., Churcher, C., Dougan, G., Wilson, R. K., and Miller, W. (2000) Comparison of the Escherichia coli K-12 genome with sampled genomes of a Klebsiella pneumoniae and three Salmonella enterica serovars, Typhimurium, Typhi and Paratyphi. Nucleic Acids Res. 28, 4974- 4986
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4974-4986
-
-
McClelland, M.1
Florea, L.2
Sanderson, K.3
Clifton, S.W.4
Parkhill, J.5
Churcher, C.6
Dougan, G.7
Wilson, R.K.8
Miller, W.9
-
59
-
-
0026002819
-
Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: Codon usage, map position, and concerted evolution
-
Sharp, P. M. (1991) Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: codon usage, map position, and concerted evolution. J. Mol. Evol. 33, 23-33
-
(1991)
J. Mol. Evol.
, vol.33
, pp. 23-33
-
-
Sharp, P.M.1
-
61
-
-
84860321953
-
Role of the N-terminus in determining metal-specific responses in the Escherichia coli Ni- and Co-responsive metalloregulator, RcnR
-
Higgins, K. A., Chivers, P. T., and Maroney, M. J. (2012) Role of the N-terminus in determining metal-specific responses in the Escherichia coli Ni- and Co-responsive metalloregulator, RcnR. J. Am. Chem. Soc. 134, 7081-7093
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 7081-7093
-
-
Higgins, K.A.1
Chivers, P.T.2
Maroney, M.J.3
-
62
-
-
84899991141
-
Metal specificity of cyanobacterial nickel-responsive repressor InrS: Cells maintain zinc and copper below the detection threshold for InrS
-
Foster, A. W., Pernil, R., Patterson, C. J., and Robinson, N. J. (2014) Metal specificity of cyanobacterial nickel-responsive repressor InrS: cells maintain zinc and copper below the detection threshold for InrS. Mol. Microbiol. 92, 797-812
-
(2014)
Mol. Microbiol.
, vol.92
, pp. 797-812
-
-
Foster, A.W.1
Pernil, R.2
Patterson, C.J.3
Robinson, N.J.4
-
63
-
-
34248573312
-
Nucleophilicities of primary and secondary amines in water
-
Brotzel, F., Chu, Y. C., and Mayr, H. (2007) Nucleophilicities of primary and secondary amines in water. J. Org. Chem. 72, 3679-3688
-
(2007)
J. Org. Chem.
, vol.72
, pp. 3679-3688
-
-
Brotzel, F.1
Chu, Y.C.2
Mayr, H.3
-
64
-
-
36148929732
-
Nucleophilicities of amino acids and peptides
-
Brotzel, F., and Mayr, H. (2007) Nucleophilicities of amino acids and peptides. Org. Biomol. Chem. 5, 3814-3820
-
(2007)
Org. Biomol. Chem.
, vol.5
, pp. 3814-3820
-
-
Brotzel, F.1
Mayr, H.2
-
65
-
-
70349435274
-
DNA recognition and wrapping by Escherichia coli RcnR
-
Iwig, J. S., and Chivers, P. T. (2009) DNA recognition and wrapping by Escherichia coli RcnR. J. Mol. Biol. 393, 514-526
-
(2009)
J. Mol. Biol.
, vol.393
, pp. 514-526
-
-
Iwig, J.S.1
Chivers, P.T.2
-
66
-
-
84865805414
-
Illuminating allostery in metal sensing transcriptional regulators
-
Grossoehme, N. E., and Giedroc, D. P. (2012) Illuminating allostery in metal sensing transcriptional regulators. Methods Mol. Biol. 875, 165-192
-
(2012)
Methods Mol. Biol.
, vol.875
, pp. 165-192
-
-
Grossoehme, N.E.1
Giedroc, D.P.2
-
67
-
-
84857861036
-
Metal site occupancy and allosteric switching in bacterial metal sensor proteins
-
Guerra, A. J., and Giedroc, D. P. (2012) Metal site occupancy and allosteric switching in bacterial metal sensor proteins. Arch. Biochem. Biophys. 519, 210-222
-
(2012)
Arch. Biochem. Biophys.
, vol.519
, pp. 210-222
-
-
Guerra, A.J.1
Giedroc, D.P.2
-
68
-
-
70350637580
-
Coordination chemistry of bacterial metal transport and sensing
-
Ma, Z., Jacobsen, F. E., and Giedroc, D. P. (2009) Coordination chemistry of bacterial metal transport and sensing. Chem. Rev. 109, 4644-4681
-
(2009)
Chem. Rev.
, vol.109
, pp. 4644-4681
-
-
Ma, Z.1
Jacobsen, F.E.2
Giedroc, D.P.3
-
69
-
-
0035932413
-
A metabolic enzyme for S-nitrosothiol conserved from bacteria to humans
-
Liu, L., Hausladen, A., Zeng, M., Que, L., Heitman, J., and Stamler, J. S. (2001) A metabolic enzyme for S-nitrosothiol conserved from bacteria to humans. Nature 410, 490-494
-
(2001)
Nature
, vol.410
, pp. 490-494
-
-
Liu, L.1
Hausladen, A.2
Zeng, M.3
Que, L.4
Heitman, J.5
Stamler, J.S.6
-
70
-
-
6344266863
-
Crystal structure of γ-glutamylcysteine synthetase: Insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis
-
Hibi, T., Nii, H., Nakatsu, T., Kimura, A., Kato, H., Hiratake, J., and Oda, J. (2004) Crystal structure of γ-glutamylcysteine synthetase: insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis. Proc. Natl. Acad. Sci. U.S.A. 101, 15052-15057
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 15052-15057
-
-
Hibi, T.1
Nii, H.2
Nakatsu, T.3
Kimura, A.4
Kato, H.5
Hiratake, J.6
Oda, J.7
-
71
-
-
33845698923
-
Repression of ADH1 and ADH3 during zinc deficiency by Zap1-induced intergenic RNA transcripts
-
Bird, A. J., Gordon, M., Eide, D. J., and Winge, D. R. (2006) Repression of ADH1 and ADH3 during zinc deficiency by Zap1-induced intergenic RNA transcripts. EMBO J. 25, 5726-5734
-
(2006)
EMBO J.
, vol.25
, pp. 5726-5734
-
-
Bird, A.J.1
Gordon, M.2
Eide, D.J.3
Winge, D.R.4
-
72
-
-
0034608877
-
Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast
-
Lyons, T. J., Gasch, A. P., Gaither, L. A., Botstein, D., Brown, P. O., and Eide, D. J. (2000) Genome-wide characterization of the Zap1p zinc-responsive regulon in yeast. Proc. Natl. Acad. Sci. U.S.A. 97, 7957-7962
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 7957-7962
-
-
Lyons, T.J.1
Gasch, A.P.2
Gaither, L.A.3
Botstein, D.4
Brown, P.O.5
Eide, D.J.6
-
73
-
-
0034609526
-
Kinetic mechanism of human glutathione-dependent formaldehyde dehydrogenase
-
Sanghani, P. C., Stone, C. L., Ray, B. D., Pindel, E. V., Hurley, T. D., and Bosron, W. F. (2000) Kinetic mechanism of human glutathione-dependent formaldehyde dehydrogenase. Biochemistry 39, 10720-10729
-
(2000)
Biochemistry
, vol.39
, pp. 10720-10729
-
-
Sanghani, P.C.1
Stone, C.L.2
Ray, B.D.3
Pindel, E.V.4
Hurley, T.D.5
Bosron, W.F.6
-
74
-
-
12244253722
-
Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella enterica
-
Eriksson, S., Lucchini, S., Thompson, A., Rhen, M., and Hinton, J. C. D. (2003) Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella enterica. Mol. Microbiol. 47, 103-118
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 103-118
-
-
Eriksson, S.1
Lucchini, S.2
Thompson, A.3
Rhen, M.4
Hinton, J.C.D.5
-
75
-
-
84948990820
-
RNA-seq brings new insights to the intra-macrophage transcriptome of Salmonella Typhimurium
-
Srikumar, S., Kröger, C., Hébrard, M., Colgan, A., Owen, S. V., Sivasankaran, S. K., Cameron, A. D. S., Hokamp, K., and Hinton, J. C. D. (2015) RNA-seq brings new insights to the intra-macrophage transcriptome of Salmonella Typhimurium. PLoS Pathog. 11, e1005262
-
(2015)
PLoS Pathog.
, vol.11
, pp. e1005262
-
-
Srikumar, S.1
Kröger, C.2
Hébrard, M.3
Colgan, A.4
Owen, S.V.5
Sivasankaran, S.K.6
Cameron, A.D.S.7
Hokamp, K.8
Hinton, J.C.D.9
-
76
-
-
0029913901
-
Identification of a virulence locus encoding a second type III secretion system in Salmonella typhimurium
-
Shea, J. E., Hensel, M., Gleeson, C., and Holden, D. W. (1996) Identification of a virulence locus encoding a second type III secretion system in Salmonella typhimurium. Proc. Natl. Acad. Sci. U.S.A. 93, 2593-2597
-
(1996)
Proc. Natl. Acad. Sci. U. S. A.
, vol.93
, pp. 2593-2597
-
-
Shea, J.E.1
Hensel, M.2
Gleeson, C.3
Holden, D.W.4
-
77
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
Baba, T., Ara, T., Hasegawa, M., Takai, Y., Okumura, Y., Baba, M., Datsenko, K. A., Tomita, M., Wanner, B. L., and Mori, H. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 10.1038/msb4100050
-
(2006)
Mol. Syst. Biol.
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
78
-
-
0003903345
-
-
3rd Ed, Cold Spring Harbor Laboratory Press , Cold Spring Harbor, NY
-
Sambrook, J., and Russell, D. W. (2001) Molecular Cloning: A Laboratory Manual, 3rd Ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
(2001)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Russell, D.W.2
-
79
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko, K. A., and Wanner, B. L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. U.S.A. 97, 6640-6645
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
80
-
-
84946069451
-
UniProt: A hub for protein information
-
UniProt Consortium (2015) UniProt: a hub for protein information. Nucleic Acids Res. 43, D204-D212
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D204-D212
-
-
Consortium, U.1
-
81
-
-
23144440940
-
PRALINE: A multiple sequence alignment toolbox that integrates homology-extended and secondary structure informatio
-
Simossis, V. A., and Heringa, J. (2005) PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information. Nucleic Acids Res. 33, W289-W294
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. W289-W294
-
-
Simossis, V.A.1
Heringa, J.2
-
82
-
-
36448991500
-
Clustal W and clustal X version 2.0
-
Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J., and Higgins, D. G. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23, 2947-2948
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
83
-
-
80054078476
-
Fast, scalable generation of high-quality protein multiple sequence alignments using clustal Omega
-
Sievers, F., Wilm, A., Dineen, D., Gibson, T. J., Karplus, K., Li, W., Lopez, R., McWilliam, H., Remmert, M., Söding, J., Thompson, J. D., and Higgins, D. G. (2011) Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol. Syst. Biol. 7, 539
-
(2011)
Mol. Syst. Biol.
, vol.7
, pp. 539
-
-
Sievers, F.1
Wilm, A.2
Dineen, D.3
Gibson, T.J.4
Karplus, K.5
Li, W.6
Lopez, R.7
McWilliam, H.8
Remmert, M.9
Söding, J.10
Thompson, J.D.11
Higgins, D.G.12
-
84
-
-
0023255472
-
Improved single and multicopy lac-based cloning vectors for protein and operon fusions
-
Simons, R. W., Houman, F., and Kleckner, N. (1987) Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53, 85-96
-
(1987)
Gene
, vol.53
, pp. 85-96
-
-
Simons, R.W.1
Houman, F.2
Kleckner, N.3
-
85
-
-
77955499578
-
Copper homeostasis in Salmonella is atypical and copper-CueP is a major periplasmic metal complex
-
Osman, D., Waldron, K. J., Denton, H., Taylor, C. M., Grant, A. J., Mastroeni, P., Robinson, N. J., and Cavet, J. S. (2010) Copper homeostasis in Salmonella is atypical and copper-CueP is a major periplasmic metal complex. J. Biol. Chem. 285, 25259-25268
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 25259-25268
-
-
Osman, D.1
Waldron, K.J.2
Denton, H.3
Taylor, C.M.4
Grant, A.J.5
Mastroeni, P.6
Robinson, N.J.7
Cavet, J.S.8
-
86
-
-
53249086198
-
A Cu(I)-sensing ArsR family metal sensor protein with a relaxed metal selectivity profile
-
Liu, T., Chen, X., Ma, Z., Shokes, J., Hemmingsen, L., Scott, R. A., and Giedroc, D. P. (2008) A Cu(I)-sensing ArsR family metal sensor protein with a relaxed metal selectivity profile. Biochemistry 47, 10564-10575
-
(2008)
Biochemistry
, vol.47
, pp. 10564-10575
-
-
Liu, T.1
Chen, X.2
Ma, Z.3
Shokes, J.4
Hemmingsen, L.5
Scott, R.A.6
Giedroc, D.P.7
-
87
-
-
0029902679
-
Program DYNAFIT for the analysis of enzyme kinetic data: Application to HIV proteinase
-
Kuzmic, P. (1996) Program DYNAFIT for the analysis of enzyme kinetic data: application to HIV proteinase. Anal. Biochem. 237, 260-273
-
(1996)
Anal. Biochem.
, vol.237
, pp. 260-273
-
-
Kuzmic, P.1
-
88
-
-
0000434996
-
Mounting of crystals for macromolecular crystallography in a free-standing thin film
-
Teng T-Y. (1990) Mounting of crystals for macromolecular crystallography in a free-standing thin film. J. Appl. Cryst. 23, 387-391
-
(1990)
J. Appl. Cryst.
, vol.23
, pp. 387-391
-
-
Teng, T.-Y.1
-
89
-
-
33645322639
-
The PILATUS 1M detector
-
Broennimann, C., Eikenberry, E. F., Henrich, B., Horisberger, R., Huelsen, G., Pohl, E., Schmitt, B., Schulze-Briese, C., Suzuki, M., Tomizaki, T., Toyokawa, H., and Wagner, A. (2006) The PILATUS 1M detector. J. Synchrotron Radiat. 13, 120-130
-
(2006)
J. Synchrotron Radiat.
, vol.13
, pp. 120-130
-
-
Broennimann, C.1
Eikenberry, E.F.2
Henrich, B.3
Horisberger, R.4
Huelsen, G.5
Pohl, E.6
Schmitt, B.7
Schulze-Briese, C.8
Suzuki, M.9
Tomizaki, T.10
Toyokawa, H.11
Wagner, A.12
-
90
-
-
84879384669
-
Autoindexing diffraction images with iMosflm
-
Powell, H. R., Johnson, O., and Leslie, A. G. W. (2013) Autoindexing diffraction images with iMosflm. Acta Crystallogr. D Biol. Crystallogr. 69, 1195-1203
-
(2013)
Acta Crystallogr. D Biol. Crystallogr.
, vol.69
, pp. 1195-1203
-
-
Powell, H.R.1
Johnson, O.2
Leslie, A.G.W.3
-
91
-
-
75649151032
-
An expert system for macromolecular crystallography data reduction
-
xia2
-
Winter, G. (2010) xia2: an expert system for macromolecular crystallography data reduction. J. Appl. Cryst. 43, 186-190
-
(2010)
J. Appl. Cryst.
, vol.43
, pp. 186-190
-
-
Winter, G.1
-
93
-
-
84887396993
-
Phaser. MRage: Automated molecular replacement
-
Bunkóczi, G., Echols, N., McCoy, A. J., Oeffner, R. D., Adams, P. D., and Read, R. J. (2013) Phaser.MRage: automated molecular replacement. Acta Crystallogr. D Biol. Crystallogr. 69, 2276-2286
-
(2013)
Acta Crystallogr. D Biol. Crystallogr.
, vol.69
, pp. 2276-2286
-
-
Bunkóczi, G.1
Echols, N.2
McCoy, A.J.3
Oeffner, R.D.4
Adams, P.D.5
Read, R.J.6
-
94
-
-
84940853041
-
Macromolecular ab initio phasing enforcing secondary and tertiary structure
-
Millán, C., Sammito, M., and Usón, I. (2015) Macromolecular ab initio phasing enforcing secondary and tertiary structure. IUCrJ 2, 95-105
-
(2015)
IUCrJ
, vol.2
, pp. 95-105
-
-
Millán, C.1
Sammito, M.2
Usón, I.3
-
95
-
-
84902439104
-
Structure solution of DNA-binding proteins and complexes with ARCIMBOLDO libraries
-
Pröpper, K., Meindl, K., Sammito, M., Dittrich, B., Sheldrick, G. M., Pohl, E., and Usón, I. (2014) Structure solution of DNA-binding proteins and complexes with ARCIMBOLDO libraries. Acta Crystallogr. D. Biol. Crystallogr. 70, 1743-1757
-
(2014)
Acta Crystallogrd. Biol. Crystallogr.
, vol.70
, pp. 1743-1757
-
-
Pröpper, K.1
Meindl, K.2
Sammito, M.3
Dittrich, B.4
Sheldrick, G.M.5
Pohl, E.6
Usón, I.7
-
97
-
-
79953763877
-
REFMAC5 for the refinement of macromolecular crystal structures
-
Murshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F., and Vagin, A. A. (2011) REFMAC5 for the refinement of macromolecular crystal structures. Acta Crystallogr. D Biol. Crystallogr. 67, 355-367
-
(2011)
Acta Crystallogr. D Biol. Crystallogr.
, vol.67
, pp. 355-367
-
-
Murshudov, G.N.1
Skubák, P.2
Lebedev, A.A.3
Pannu, N.S.4
Steiner, R.A.5
Nicholls, R.A.6
Winn, M.D.7
Long, F.8
Vagin, A.A.9
-
98
-
-
0032988302
-
1.7 Å structure of the stabilized REIv mutant T39K: Application of local NCS restraints
-
Usón, I., Pohl, E., Schneider, T. R., Dauter, Z., Schmidt, A., Fritz, H.-J., and Sheldrick, G. M. (1999) 1.7 Å structure of the stabilized REIv mutant T39K: application of local NCS restraints. Acta Crystallogr. D Biol. Crystallogr. 55, 1158-1167
-
(1999)
Acta Crystallogr. D Biol. Crystallogr.
, vol.55
, pp. 1158-1167
-
-
Usón, I.1
Pohl, E.2
Schneider, T.R.3
Dauter, Z.4
Schmidt, A.5
Fritz, H.-J.6
Sheldrick, G.M.7
-
99
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams, P. D., Afonine, P. V., Bunkóczi, G., Chen, V. B., Davis, I. W., Echols, N., Headd, J. J., Hung, L. W., Kapral, G. J., Grosse-Kunstleve, R. W., McCoy, A. J., Moriarty, N. W., Oeffner, R., Read, R. J., Richardson, D. C., et al. (2010) PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D. Biol. Crystallogr. 66, 213-221
-
(2010)
Acta Crystallogr. D. Biol. Crystallogr.
, Issue.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkóczi, G.3
Chen, B.4
Echols, N.5
Headd, J.J.6
Hung, W.L.7
Kapral, J.G.8
Grosse-Kunstleve, W.R.9
McCoy, J.A.10
Moriarty, N.W.11
Oeffner, R.12
Read, R.J.13
Richardson, D.C.14
-
100
-
-
0037441653
-
Structure validation by Cα geometry: φ,ψ and Cβ deviation
-
Lovell, S. C., Davis, I. W., Arendall, W. B., 3rd, de Bakker, P. I., Word, J. M., Prisant, M. G., Richardson, J. S., and Richardson, D. C. (2003) Structure validation by Cα geometry: φ,ψ and Cβ deviation. Proteins 50, 437- 450
-
(2003)
Proteins
, vol.50
, pp. 437-450
-
-
Lovell, S.C.1
Davis, I.W.2
Arendall, W.B.3
De Bakker, P.I.4
Word, J.M.5
Prisant, M.G.6
Richardson, J.S.7
Richardson, D.C.8
-
101
-
-
78449249372
-
Control of redox balance by the stringent response regulatory protein promotes antioxidant defenses of Salmonella
-
Henard, C. A., Bourret, T. J., Song, M., and Vázquez-Torres, A. (2010) Control of redox balance by the stringent response regulatory protein promotes antioxidant defenses of Salmonella. J. Biol. Chem. 285, 36785-36793
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 36785-36793
-
-
Henard, C.A.1
Bourret, T.J.2
Song, M.3
Vázquez-Torres, A.4
-
102
-
-
84873060569
-
Low-molecular-weight thiol-dependent antioxidant and antinitrosative defences in Salmonella pathogenesis
-
Song, M., Husain, M., Jones-Carson, J., Liu, L., Henard, C. A., and Vázquez-Torres, A. (2013) Low-molecular-weight thiol-dependent antioxidant and antinitrosative defences in Salmonella pathogenesis. Mol. Microbiol. 87, 609- 622
-
(2013)
Mol. Microbiol
, vol.87
, pp. 609-622
-
-
Song, M.1
Husain, M.2
Jones-Carson, J.3
Liu, L.4
Henard, C.A.5
Vázquez-Torres, A.6
-
103
-
-
4444221565
-
UCSF Chimera: A visualization system for exploratory research and analysis
-
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E. (2004) UCSF Chimera: a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
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