-
1
-
-
70350637580
-
Coordination chemistry of bacterial metal transport and sensing
-
Ma, Z., Jacobsen, F. E., and Giedroc, D. P. (2009) Coordination chemistry of bacterial metal transport and sensing. Chem. Rev. 109, 4644-4681
-
(2009)
Chem. Rev.
, vol.109
, pp. 4644-4681
-
-
Ma, Z.1
Jacobsen, F.E.2
Giedroc, D.P.3
-
2
-
-
57649207910
-
How do bacterial cells ensure that metalloproteins get the correct metal?
-
Waldron, K. J., and Robinson, N. J. (2009) How do bacterial cells ensure that metalloproteins get the correct metal? Nat. Rev. Microbiol. 7, 25-35
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 25-35
-
-
Waldron, K.J.1
Robinson, N.J.2
-
3
-
-
68949170348
-
Metalloproteins and metal sensing
-
Waldron, K. J., Rutherford, J. C., Ford, D., and Robinson, N. J. (2009) Metalloproteins and metal sensing. Nature 460, 823-830
-
(2009)
Nature
, vol.460
, pp. 823-830
-
-
Waldron, K.J.1
Rutherford, J.C.2
Ford, D.3
Robinson, N.J.4
-
5
-
-
0043192605
-
Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR
-
DOI 10.1126/science.1085950
-
Changela, A., Chen, K., Xue, Y., Holschen, J., Outten, C. E., O'Halloran, T. V., and Mondragón, A. (2003) Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR. Science 301, 1383-1387 (Pubitemid 37075815)
-
(2003)
Science
, vol.301
, Issue.5638
, pp. 1383-1387
-
-
Changela, A.1
Chen, K.2
Xue, Y.3
Holschen, J.4
Outten, C.E.5
O'Halloran, T.V.6
Mondragon, A.7
-
6
-
-
0037565100
-
Copper homeostasis in Enterococcus hirae
-
DOI 10.1016/S0168-6445(03)00053-6
-
Solioz, M., and Stoyanov, J. V. (2003) Copper homeostasis in Enterococcus hirae. FEMS Microbiol. Rev. 27, 183-195 (Pubitemid 36694655)
-
(2003)
FEMS Microbiology Reviews
, vol.27
, Issue.2-3
, pp. 183-195
-
-
Solioz, M.1
Stoyanov, J.V.2
-
7
-
-
33845736364
-
CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator
-
DOI 10.1038/nchembio844, PII NCHEMBIO844
-
Liu, T., Ramesh, A., Ma, Z., Ward, S. K., Zhang, L., George, G. N., Talaat, A. M., Sacchettini, J. C., and Giedroc, D. P. (2007) CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator. Nat. Chem. Biol. 3, 60-68 (Pubitemid 46005700)
-
(2007)
Nature Chemical Biology
, vol.3
, Issue.1
, pp. 60-68
-
-
Liu, T.1
Ramesh, A.2
Ma, Z.3
Ward, S.K.4
Zhang, L.5
George, G.N.6
Talaat, A.M.7
Sacchettini, J.C.8
Giedroc, D.P.9
-
8
-
-
0030867564
-
Stimulatory effect of copper on antibiotic production and morphological differentiation in Streptomyces tanashiensis
-
Ueda, K., Tomaru, Y., Endoh, K., and Beppu, T. (1997) Stimulatory effect of copper on antibiotic production and morphological differentiation in Streptomyces tanashiensis. J. Antibiot. 50, 693-695 (Pubitemid 27401707)
-
(1997)
Journal of Antibiotics
, vol.50
, Issue.8
, pp. 693-695
-
-
Ueda, K.1
Tomaru, Y.2
Endoh, K.3
Beppu, T.4
-
9
-
-
0033759267
-
The ram-dependence of Streptomyces lividans differentiation is bypassed by copper
-
Keijser, B. J., van Wezel, G. P., Canters, G. W., Kieser, T., and Vijgenboom, E. (2000) The ram-dependence of Streptomyces lividans differentiation is bypassed by copper. J. Mol. Microbiol. Biotechnol. 2, 565-574
-
(2000)
J. Mol. Microbiol. Biotechnol.
, vol.2
, pp. 565-574
-
-
Keijser, B.J.1
Van Wezel, G.P.2
Canters, G.W.3
Kieser, T.4
Vijgenboom, E.5
-
10
-
-
77951990361
-
Copper mining in Streptomyces. Enzymes, natural products, and development
-
Worrall, J. A., and Vijgenboom, E. (2010) Copper mining in Streptomyces. Enzymes, natural products, and development. Nat. Prod. Rep. 27, 742-756
-
(2010)
Nat. Prod. Rep.
, vol.27
, pp. 742-756
-
-
Worrall, J.A.1
Vijgenboom, E.2
-
11
-
-
84861216995
-
Pleiotropic role of the Sco1/SenC family copper chaperone in the physiology of Streptomyces
-
in press
-
Fujimoto, M., Yamada, A., Kurosawa, J., Kawata, A., Beppu, T., Takano, H., and Ueda, K. (2011) Pleiotropic role of the Sco1/SenC family copper chaperone in the physiology of Streptomyces Microbial. Biotechnol., in press
-
(2011)
Microbial. Biotechnol.
-
-
Fujimoto, M.1
Yamada, A.2
Kurosawa, J.3
Kawata, A.4
Beppu, T.5
Takano, H.6
Ueda, K.7
-
12
-
-
38649097521
-
Occurrence of copper proteins through the three domains of life: A bioinformatic approach
-
DOI 10.1021/pr070480u
-
Andreini, C., Banci, L., Bertini, I., and Rosato, A. (2008) Occurrence of copper proteins through the three domains of life. A bioinformatic approach. J. Proteome Res. 7, 209-216 (Pubitemid 351171133)
-
(2008)
Journal of Proteome Research
, vol.7
, Issue.1
, pp. 209-216
-
-
Andreini, C.1
Banci, L.2
Bertini, I.3
Rosato, A.4
-
13
-
-
70449394004
-
Extracellular and intracellular polyphenol oxidases cause opposite effects on sensitivity of Streptomyces to phenolics. A case of double-edged sword
-
Yang, H. Y., and Chen, C. W. (2009) Extracellular and intracellular polyphenol oxidases cause opposite effects on sensitivity of Streptomyces to phenolics. A case of double-edged sword. PLoS One 4, e7462
-
(2009)
PLoS One
, vol.4
-
-
Yang, H.Y.1
Chen, C.W.2
-
14
-
-
41949128961
-
The global responses of Mycobacterium tuberculosis to physiological levels of copper
-
DOI 10.1128/JB.01847-07
-
Ward, S. K., Hoye, E. A., and Talaat, A. M. (2008) The global responses of Mycobacterium tuberculosis to physiological levels of copper. J. Bacteriol. 190, 2939-2946 (Pubitemid 351508193)
-
(2008)
Journal of Bacteriology
, vol.190
, Issue.8
, pp. 2939-2946
-
-
Ward, S.K.1
Hoye, E.A.2
Talaat, A.M.3
-
15
-
-
37449020787
-
CsoR regulates the copper efflux operon copZA in Bacillus subtilis
-
Smaldone, G. T., and Helmann, J. D. (2007) CsoR regulates the copper efflux operon copZA in Bacillus subtilis. Microbiology 153, 4123-4128
-
(2007)
Microbiology
, vol.153
, pp. 4123-4128
-
-
Smaldone, G.T.1
Helmann, J.D.2
-
16
-
-
79960177773
-
The combined actions of the copper-responsive repressor CsoR and copper-metallochaperone CopZ modulate CopA-mediated copper efflux in the intracellular pathogen Listeria monocytogenes
-
Corbett, D., Schuler, S., Glenn, S., Andrew, P. W., Cavet, J. S., and Roberts, I. S. (2011) The combined actions of the copper-responsive repressor CsoR and copper-metallochaperone CopZ modulate CopA-mediated copper efflux in the intracellular pathogen Listeria monocytogenes. Mol. Microbiol. 81, 457-472
-
(2011)
Mol. Microbiol.
, vol.81
, pp. 457-472
-
-
Corbett, D.1
Schuler, S.2
Glenn, S.3
Andrew, P.W.4
Cavet, J.S.5
Roberts, I.S.6
-
17
-
-
79953892242
-
Control of copper resistance and inorganic sulfur metabolism by paralogous regulators in Staphylococcus aureus
-
Grossoehme, N., Kehl-Fie, T. E., Ma, Z., Adams, K. W., Cowart, D. M., Scott, R. A., Skaar, E. P., and Giedroc, D. P. (2011) Control of copper resistance and inorganic sulfur metabolism by paralogous regulators in Staphylococcus aureus. J. Biol. Chem. 286, 13522-13531
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 13522-13531
-
-
Grossoehme, N.1
Kehl-Fie, T.E.2
Ma, Z.3
Adams, K.W.4
Cowart, D.M.5
Scott, R.A.6
Skaar, E.P.7
Giedroc, D.P.8
-
18
-
-
84973512981
-
-
Humana Press Inc., Totowa, NJ
-
Vijgenboom, E. K., B. J. F. (2002) in Copper and the Morphological Development of Streptomyces, Handbook of Copper Pharmacology and Toxicology, pp. 503-525, Humana Press Inc., Totowa, NJ
-
(2002)
Copper and the Morphological Development of Streptomyces, Handbook of Copper Pharmacology and Toxicology
, pp. 503-525
-
-
Vijgenboom, E.K.1
B, J.F.2
-
19
-
-
34548042564
-
Comparative genomic hybridizations reveal absence of large Streptomyces coelicolor genomic islands in Streptomyces lividans
-
Jayapal, K. P., Lian, W., Glod, F., Sherman, D. H., and Hu, W. S. (2007) Comparative genomic hybridizations reveal absence of large Streptomyces coelicolor genomic islands in Streptomyces lividans. BMC Genomics 8, 229
-
(2007)
BMC Genomics
, vol.8
, pp. 229
-
-
Jayapal, K.P.1
Lian, W.2
Glod, F.3
Sherman, D.H.4
Hu, W.S.5
-
20
-
-
78649502553
-
Metabolic and evolutionary insights into the closely related species Streptomyces coelicolor and Streptomyces lividans deduced from high resolution comparative genomic hybridization
-
Lewis, R. A., Laing, E., Allenby, N., Bucca, G., Brenner, V., Harrison, M., Kierzek, A. M., and Smith, C. P. (2010) Metabolic and evolutionary insights into the closely related species Streptomyces coelicolor and Streptomyces lividans deduced from high resolution comparative genomic hybridization. BMC Genomics 11, 682
-
(2010)
BMC Genomics
, vol.11
, pp. 682
-
-
Lewis, R.A.1
Laing, E.2
Allenby, N.3
Bucca, G.4
Brenner, V.5
Harrison, M.6
Kierzek, A.M.7
Smith, C.P.8
-
21
-
-
0029762312
-
afsR is a pleiotropic but conditionally required regulatory gene for antibiotic production in Streptomyces coelicolor A3(2)
-
Floriano, B., and Bibb, M. (1996) afsR is a pleiotropic but conditionally required regulatory gene for antibiotic production in Streptomyces coelicolor A3(2). Mol. Microbiol. 21, 385-396 (Pubitemid 26291543)
-
(1996)
Molecular Microbiology
, vol.21
, Issue.2
, pp. 385-396
-
-
Floriano, B.1
Bibb, M.2
-
22
-
-
0003869903
-
-
John Innes Foundation, Norwich, UK
-
Kieser, T. B., Bibb, M. J., Buttner, M. J., Chater, K. F., and Hopwood, D. A. (2000) Practical Streptomyces Genetics, pp. 1-613, John Innes Foundation, Norwich, UK
-
(2000)
Practical Streptomyces Genetics
, pp. 1-613
-
-
Kieser, T.B.1
Bibb, M.J.2
Buttner, M.J.3
Chater, K.F.4
Hopwood, D.A.5
-
23
-
-
43349095381
-
Functional expression of the Cre recombinase in actinomycetes
-
Fedoryshyn, M., Welle, E., Bechthold, A., and Luzhetskyy, A. (2008) Functional expression of the Cre recombinase in actinomycetes. Appl. Microbiol. Biotechnol. 78, 1065-1070
-
(2008)
Appl. Microbiol. Biotechnol.
, vol.78
, pp. 1065-1070
-
-
Fedoryshyn, M.1
Welle, E.2
Bechthold, A.3
Luzhetskyy, A.4
-
24
-
-
0024419124
-
Cloning of genes governing the deoxysugar portion of the erythromycin biosynthesis pathway in Saccharopolyspora erythraea (Streptomyces erythreus)
-
Vara, J., Lewandowska-Skarbek, M., Wang, Y. G., Donadio, S., and Hutchinson, C. R. (1989) Cloning of genes governing the deoxysugar portion of the erythromycin biosynthesis pathway in Saccharopolyspora erythraea (Streptomyces erythreus). J. Bacteriol. 171, 5872-5881 (Pubitemid 19266910)
-
(1989)
Journal of Bacteriology
, vol.171
, Issue.11
, pp. 5872-5881
-
-
Vara, J.1
Lewandowska-Skarbek, M.2
Wang, Y.-G.3
Donadio, S.4
Hutchinson, C.R.5
-
25
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
DOI 10.1038/nmeth.1226, PII NMETH.1226
-
Mortazavi, A., Williams, B. A., McCue, K., Schaeffer, L., and Wold, B. (2008) Mapping and quantifying mammalian transcriptomes by RNASeq. Nat. Methods 5, 621-628 (Pubitemid 351911867)
-
(2008)
Nature Methods
, vol.5
, Issue.7
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
26
-
-
0033763852
-
Application of redD, the transcriptional activator gene of the undecylprodigiosin biosynthetic pathway, as a reporter for transcriptional activity in Streptomyces coelicolor A3(2) and Streptomyces lividans
-
van Wezel, G. P., White, J., Hoogvliet, G., and Bibb, M. J. (2000) Application of redD, the transcriptional activator gene of the undecylprodigiosin biosynthetic pathway, as a reporter for transcriptional activity in Streptomyces coelicolor A3(2) and Streptomyces lividans. J. Mol. Microbiol. Biotechnol. 2, 551-556
-
(2000)
J. Mol. Microbiol. Biotechnol.
, vol.2
, pp. 551-556
-
-
Van Wezel, G.P.1
White, J.2
Hoogvliet, G.3
Bibb, M.J.4
-
27
-
-
0021913058
-
Identification of a red pigment from Streptomyces coelicolor A3(2) as a mixture of prodigiosin derivatives
-
Tsao, S. W., Rudd, B. A., He, X. G., Chang, C. J., and Floss, H. G. (1985) Identification of a red pigment from Streptomyces coelicolor A3(2) as a mixture of prodigiosin derivatives. J. Antibiot. 38, 128-131 (Pubitemid 15152736)
-
(1985)
Journal of Antibiotics
, vol.38
, Issue.1
, pp. 128-131
-
-
Tsao, S.W.1
Rudd, B.A.M.2
He, X.-G.3
-
28
-
-
0015261415
-
Purification and properties of a tyrosinase from Streptomyces glaucescens
-
Lerch, K., and Ettlinger, L. (1972) Purification and properties of a tyrosinase from Streptomyces glaucescens. Pathol. Microbiol. 38, 23-25
-
(1972)
Pathol. Microbiol.
, vol.38
, pp. 23-25
-
-
Lerch, K.1
Ettlinger, L.2
-
29
-
-
0020505048
-
Isolation and characterization of an Escherichia coli mutant lacking cytochrome d terminal oxidase
-
Green, G. N., and Gennis, R. B. (1983) Isolation and characterization of an Escherichia coli mutant lacking cytochrome d terminal oxidase. J. Bacteriol. 154, 1269-1275 (Pubitemid 13099040)
-
(1983)
Journal of Bacteriology
, vol.154
, Issue.3
, pp. 1269-1275
-
-
Green, G.N.1
Gennis, R.B.2
-
30
-
-
0024729626
-
Isolation and sequence of ctaA, a gene required for cytochrome aa3 biosynthesis and sporulation in Bacillus subtilis
-
Mueller, J. P., and Taber, H. W. (1989) Isolation and sequence of ctaA, a gene required for cytochrome aa3 biosynthesis and sporulation in Bacillus subtilis. J. Bacteriol. 171, 4967-4978
-
(1989)
J. Bacteriol.
, vol.171
, pp. 4967-4978
-
-
Mueller, J.P.1
Taber, H.W.2
-
31
-
-
0029008357
-
Integrative vectors for heterologous gene expression in Streptomyces spp
-
Motamedi, H., Shafiee, A., and Cai, S. J. (1995) Integrative vectors for heterologous gene expression in Streptomyces spp. Gene 160, 25-31
-
(1995)
Gene
, vol.160
, pp. 25-31
-
-
Motamedi, H.1
Shafiee, A.2
Cai, S.J.3
-
32
-
-
0022721552
-
The minimal replicon of a streptomycete plasmid produces an ultrahigh level of plasmid DNA
-
Larson, J. L., and Hershberger, C. L. (1986) The minimal replicon of a streptomycete plasmid produces an ultrahigh level of plasmid DNA. Plasmid 15, 199-209
-
(1986)
Plasmid
, vol.15
, pp. 199-209
-
-
Larson, J.L.1
Hershberger, C.L.2
-
33
-
-
3042934967
-
Tissue sulfhydryl groups
-
Ellman, G. L. (1959) Tissue sulfhydryl groups. Arch. Biochem. Biophys. 82, 70-77
-
(1959)
Arch. Biochem. Biophys.
, vol.82
, pp. 70-77
-
-
Ellman, G.L.1
-
34
-
-
44349084237
-
Transfer of copper between bis(thiosemicarbazone) ligands and intracellular copper-binding proteins. Insights into mechanisms of copper uptake and hypoxia selectivity
-
Xiao, Z., Donnelly, P. S., Zimmermann, M., and Wedd, A. G. (2008) Transfer of copper between bis(thiosemicarbazone) ligands and intracellular copper-binding proteins. Insights into mechanisms of copper uptake and hypoxia selectivity. Inorg. Chem. 47, 4338-4347
-
(2008)
Inorg. Chem.
, vol.47
, pp. 4338-4347
-
-
Xiao, Z.1
Donnelly, P.S.2
Zimmermann, M.3
Wedd, A.G.4
-
35
-
-
1642404510
-
C-Terminal Domain of the Membrane Copper Transporter Ctr1 from Saccharomyces cerevisiae Binds Four Cu(I) Ions as a Cuprous-Thiolate Polynuclear Cluster: Sub-femtomolar Cu(I) Affinity of Three Proteins Involved in Copper Trafficking
-
DOI 10.1021/ja0390350
-
Xiao, Z., Loughlin, F., George, G. N., Howlett, G. J., and Wedd, A. G. (2004) C-terminal domain of the membrane copper transporter Ctr1 from Saccharomyces cerevisiae binds four Cu(I) ions as a cuprous-thiolate polynuclear cluster. Sub-femtomolar Cu(I) affinity of three proteins involved in copper trafficking. J. Am. Chem. Soc. 126, 3081-3090 (Pubitemid 38380713)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.10
, pp. 3081-3090
-
-
Xiao, Z.1
Loughlin, F.2
George, G.N.3
Howlett, G.J.4
Wedd, A.G.5
-
36
-
-
79953211568
-
Unification of the copper(I) binding affinities of the metallochaperones Atx1, Atox1, and related proteins. Detection probes and affinity standards
-
Xiao, Z., Brose, J., Schimo, S., Ackland, S. M., La Fontaine, S., and Wedd, A. G. (2011) Unification of the copper(I) binding affinities of the metallochaperones Atx1, Atox1, and related proteins. Detection probes and affinity standards. J. Biol. Chem. 286, 11047-11055
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 11047-11055
-
-
Xiao, Z.1
Brose, J.2
Schimo, S.3
Ackland, S.M.4
La Fontaine, S.5
Wedd, A.G.6
-
37
-
-
79960386471
-
Regulon of the N-acetylglucosamine utilization regulator NagR in Bacillus subtilis
-
Bertram, R., Rigali, S., Wood, N., Lulko, A. T., Kuipers, O. P., and Titgemeyer, F. (2011) Regulon of the N-acetylglucosamine utilization regulator NagR in Bacillus subtilis. J. Bacteriol. 193, 3525-3536
-
(2011)
J. Bacteriol.
, vol.193
, pp. 3525-3536
-
-
Bertram, R.1
Rigali, S.2
Wood, N.3
Lulko, A.T.4
Kuipers, O.P.5
Titgemeyer, F.6
-
38
-
-
65249102750
-
Molecular insights into the metal selectivity of the copper(I)-sensing repressor CsoR from Bacillus subtilis
-
Ma, Z., Cowart, D. M., Scott, R. A., and Giedroc, D. P. (2009) Molecular insights into the metal selectivity of the copper(I)-sensing repressor CsoR from Bacillus subtilis. Biochemistry 48, 3325-3334
-
(2009)
Biochemistry
, vol.48
, pp. 3325-3334
-
-
Ma, Z.1
Cowart, D.M.2
Scott, R.A.3
Giedroc, D.P.4
-
39
-
-
78650251930
-
Anovel copper-responsive regulon in Mycobacterium tuberculosis
-
Festa, R. A., Jones, M. B., Butler-Wu, S., Sinsimer, D., Gerads, R., Bishai, W. R., Peterson, S. N., and Darwin, K. H. (2011)Anovel copper-responsive regulon in Mycobacterium tuberculosis. Mol. Microbiol. 79, 133-148
-
(2011)
Mol. Microbiol.
, vol.79
, pp. 133-148
-
-
Festa, R.A.1
Jones, M.B.2
Butler-Wu, S.3
Sinsimer, D.4
Gerads, R.5
Bishai, W.R.6
Peterson, S.N.7
Darwin, K.H.8
-
40
-
-
34247893728
-
PREDetector: A new tool to identify regulatory elements in bacterial genomes
-
DOI 10.1016/j.bbrc.2007.03.180, PII S0006291X07006845
-
Hiard, S., Maré, R., Colson, S., Hoskisson, P. A., Titgemeyer, F., van Wezel, G. P., Joris, B., Wehenkel, L., and Rigali, S. (2007) PREDetector. A new tool to identify regulatory elements in bacterial genomes. Biochem. Biophys. Res. Commun. 357, 861-864 (Pubitemid 46693651)
-
(2007)
Biochemical and Biophysical Research Communications
, vol.357
, Issue.4
, pp. 861-864
-
-
Hiard, S.1
Maree, R.2
Colson, S.3
Hoskisson, P.A.4
Titgemeyer, F.5
Van Wezel, G.P.6
Joris, B.7
Wehenkel, L.8
Sebastien, R.9
-
41
-
-
79953759821
-
iMOSFLM. A new graphical interface for diffraction-image processing with MOSFLM
-
Battye, T. G., Kontogiannis, L., Johnson, O., Powell, H. R., and Leslie, A. G. (2011) iMOSFLM. A new graphical interface for diffraction-image processing with MOSFLM. Acta Crystallogr. D Biol. Crystallogr. 67, 271-281
-
(2011)
Acta Crystallogr. D Biol. Crystallogr.
, vol.67
, pp. 271-281
-
-
Battye, T.G.1
Kontogiannis, L.2
Johnson, O.3
Powell, H.R.4
Leslie, A.G.5
-
43
-
-
37349023302
-
BALBES.A molecular replacement pipeline
-
Long, F., Vagin, A. A., Young, P., and Murshudov, G. N. (2008) BALBES.A molecular replacement pipeline. Acta Crystallogr. D Biol. Crystallogr. 64, 125-132
-
(2008)
Acta Crystallogr. D Biol. Crystallogr.
, vol.64
, pp. 125-132
-
-
Long, F.1
Vagin, A.A.2
Young, P.3
Murshudov, G.N.4
-
44
-
-
33748337934
-
The Buccaneer software for automated model building. 1. Tracing protein chains
-
Cowtan, K. (2006) The Buccaneer software for automated model building. 1. Tracing protein chains. Acta Crystallogr. D Biol. Crystallogr. 62, 1002-1011
-
(2006)
Acta Crystallogr. D Biol. Crystallogr.
, vol.62
, pp. 1002-1011
-
-
Cowtan, K.1
-
45
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
DOI 10.1107/S0907444996012255
-
Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D Biol. Crystallogr. 53, 240-255 (Pubitemid 27235885)
-
(1997)
Acta Crystallographica Section D: Biological Crystallography
, vol.53
, Issue.3
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
47
-
-
34547592557
-
MolProbity. All-atom contacts and structure validation for proteins and nucleic acids
-
Davis, I. W., Leaver-Fay, A., Chen, V. B., Block, J. N., Kapral, G. J., Wang, X., Murray, L. W., Arendall, W. B., 3rd, Snoeyink, J., Richardson, J. S., and Richardson, D. C. (2007) MolProbity. All-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Res. 35, W375-W383
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
Wang, X.6
Murray, L.W.7
Arendall III, W.B.8
Snoeyink, J.9
Richardson, J.S.10
Richardson, D.C.11
-
48
-
-
3242877618
-
DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data
-
DOI 10.1093/nar/gkh371
-
Whitmore, L., and Wallace, B. A. (2004) DICHROWEB. An online server for protein secondary structure analyses from circular dichroism spectroscopic data. Nucleic Acids Res. 32, W668-W673 (Pubitemid 38997420)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.WEB SERVER ISS.
-
-
Whitmore, L.1
Wallace, B.A.2
-
49
-
-
45849096536
-
Protein secondary structure analyses from circular dichroism spectroscopy: Methods and reference databases
-
Whitmore, L., and Wallace, B. A. (2008) Protein secondary structure analyses from circular dichroism spectroscopy: methods and reference databases. Biopolymers 89, 392-400
-
(2008)
Biopolymers
, vol.89
, pp. 392-400
-
-
Whitmore, L.1
Wallace, B.A.2
-
50
-
-
77951993154
-
The challenges of determining metalprotein affinities
-
Xiao, Z., and Wedd, A. G. (2010) The challenges of determining metalprotein affinities. Nat. Prod. Rep. 27, 768-789
-
(2010)
Nat. Prod. Rep.
, vol.27
, pp. 768-789
-
-
Xiao, Z.1
Wedd, A.G.2
-
51
-
-
77954574615
-
Structural and functional characterization of the transcriptional repressor CsoR from Thermus thermophilus HB8
-
Sakamoto, K., Agari, Y., Agari, K., Kuramitsu, S., and Shinkai, A. (2010) Structural and functional characterization of the transcriptional repressor CsoR from Thermus thermophilus HB8. Microbiology 156, 1993-2005
-
(2010)
Microbiology
, vol.156
, pp. 1993-2005
-
-
Sakamoto, K.1
Agari, Y.2
Agari, K.3
Kuramitsu, S.4
Shinkai, A.5
-
52
-
-
77957802374
-
Studying bacterial transcriptomes using RNA-seq
-
Croucher, N. J., and Thomson, N. R. (2010) Studying bacterial transcriptomes using RNA-seq. Curr. Opin. Microbiol. 13, 619-624
-
(2010)
Curr. Opin. Microbiol.
, vol.13
, pp. 619-624
-
-
Croucher, N.J.1
Thomson, N.R.2
-
53
-
-
78751570979
-
RNA sequencing. Advances, challenges, and opportunities
-
Ozsolak, F., and Milos, P. M. (2011) RNA sequencing. Advances, challenges, and opportunities. Nat. Rev. Genet. 12, 87-98
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 87-98
-
-
Ozsolak, F.1
Milos, P.M.2
-
54
-
-
80955168065
-
Application of RNA-seq to reveal the transcript profile in bacteria
-
Pinto, A. C., Melo-Barbosa, H. P., Miyoshi, A., Silva, A., and Azevedo, V. (2011) Application of RNA-seq to reveal the transcript profile in bacteria. Genet. Mol. Res. 10, 1707-1718
-
(2011)
Genet. Mol. Res.
, vol.10
, pp. 1707-1718
-
-
Pinto, A.C.1
Melo-Barbosa, H.P.2
Miyoshi, A.3
Silva, A.4
Azevedo, V.5
-
55
-
-
72449153406
-
Unnatural amino acid substitution as a probe of the allosteric coupling pathway in a mycobacterial Cu(I) sensor
-
Ma, Z., Cowart, D. M., Ward, B. P., Arnold, R. J., DiMarchi, R. D., Zhang, L., George, G. N., Scott, R. A., and Giedroc, D. P. (2009) Unnatural amino acid substitution as a probe of the allosteric coupling pathway in a mycobacterial Cu(I) sensor. J. Am. Chem. Soc. 131, 18044-18045
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 18044-18045
-
-
Ma, Z.1
Cowart, D.M.2
Ward, B.P.3
Arnold, R.J.4
DiMarchi, R.D.5
Zhang, L.6
George, G.N.7
Scott, R.A.8
Giedroc, D.P.9
-
56
-
-
16644397843
-
Developments in the CCP4 molecular-graphics project
-
DOI 10.1107/S0907444904023716
-
Potterton, L., McNicholas, S., Krissinel, E., Gruber, J., Cowtan, K., Emsley, P., Murshudov, G. N., Cohen, S., Perrakis, A., and Noble, M. (2004) Developments in the CCP4 molecular graphics project. Acta Crystallogr. D Biol. Crystallogr. 60, 2288-2294 (Pubitemid 41742782)
-
(2004)
Acta Crystallographica Section D: Biological Crystallography
, vol.60
, Issue.12 I
, pp. 2288-2294
-
-
Potterton, L.1
McNicholas, S.2
Krissinel, E.3
Gruber, J.4
Cowtan, K.5
Emsley, P.6
Murshudov, G.N.7
Cohen, S.8
Perrakis, A.9
Noble, M.10
|