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Volumn 9, Issue 1, 2016, Pages

DNA methylation signature of human fetal alcohol spectrum disorder

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL; DNA; MESSENGER RNA;

EID: 84978419828     PISSN: None     EISSN: 17568935     Source Type: Journal    
DOI: 10.1186/s13072-016-0074-4     Document Type: Article
Times cited : (125)

References (82)
  • 1
    • 85027944257 scopus 로고    scopus 로고
    • Fetal alcohol spectrum disorders: Neuropsychological and behavioral features
    • 21503685 3410672
    • Mattson SN, Crocker N, Nguyen TT. Fetal alcohol spectrum disorders: neuropsychological and behavioral features. Neuropsychol Rev. 2011;21(2):81-101.
    • (2011) Neuropsychol Rev. , vol.21 , Issue.2 , pp. 81-101
    • Mattson, S.N.1    Crocker, N.2    Nguyen, T.T.3
  • 2
    • 20444452928 scopus 로고    scopus 로고
    • Prenatal alcohol exposure and fetal programming: Effects on neuroendocrine and immune function
    • 1:CAS:528:DC%2BD2MXlsVWgsrk%3D
    • Zhang X, Sliwowska JH, Weinberg J. Prenatal alcohol exposure and fetal programming: effects on neuroendocrine and immune function. Exp Biol Med. 2005;230:376-88.
    • (2005) Exp Biol Med , vol.230 , pp. 376-388
    • Zhang, X.1    Sliwowska, J.H.2    Weinberg, J.3
  • 3
    • 80053255280 scopus 로고    scopus 로고
    • Mental health issues in fetal alcohol spectrum disorder
    • 21780939
    • Pei J, Denys K, Hughes J, Rasmussen C. Mental health issues in fetal alcohol spectrum disorder. J Ment Health. 2011;20(5):438-48.
    • (2011) J Ment Health. , vol.20 , Issue.5 , pp. 438-448
    • Pei, J.1    Denys, K.2    Hughes, J.3    Rasmussen, C.4
  • 5
    • 33847622916 scopus 로고    scopus 로고
    • Neuropharmacology of drugs and alcohol in mother and fetus
    • 17240208
    • Pollard I. Neuropharmacology of drugs and alcohol in mother and fetus. Semin Fetal Neonatal Med. 2007;12:106-13.
    • (2007) Semin Fetal Neonatal Med , vol.12 , pp. 106-113
    • Pollard, I.1
  • 6
    • 0015821371 scopus 로고
    • Recognition of the fetal alcohol syndrome in early infancy
    • 1:STN:280:DyaE2c%2FisFOnsA%3D%3D 4127281
    • Jones KL, Smith DW. Recognition of the fetal alcohol syndrome in early infancy. Lancet. 1973;302:999-1001.
    • (1973) Lancet , vol.302 , pp. 999-1001
    • Jones, K.L.1    Smith, D.W.2
  • 7
    • 0033868317 scopus 로고    scopus 로고
    • Diagnosing the full spectrum of fetal alcohol-exposed individuals: Introducing the 4-digit diagnostic code
    • 1:STN:280:DC%2BD3M%2FlsV2ksg%3D%3D 10906009
    • Astley SJ, Clarren SK. Diagnosing the full spectrum of fetal alcohol-exposed individuals: introducing the 4-digit diagnostic code. Alcohol Alcohol. 2000;35:400-10.
    • (2000) Alcohol Alcohol , vol.35 , pp. 400-410
    • Astley, S.J.1    Clarren, S.K.2
  • 9
    • 84855956247 scopus 로고    scopus 로고
    • Epigenetics and the environment: Emerging patterns and implications
    • 1:CAS:528:DC%2BC38XivFaqug%3D%3D 22215131
    • Feil R, Fraga MF. Epigenetics and the environment: emerging patterns and implications. Nat Rev Genet. 2012;13:97-109.
    • (2012) Nat Rev Genet , vol.13 , pp. 97-109
    • Feil, R.1    Fraga, M.F.2
  • 10
    • 34249337761 scopus 로고    scopus 로고
    • Perceptions of epigenetics
    • 1:CAS:528:DC%2BD2sXlsFOgsrk%3D 17522671
    • Bird A. Perceptions of epigenetics. Nature. 2007;447:396-8.
    • (2007) Nature , vol.447 , pp. 396-398
    • Bird, A.1
  • 11
    • 0035839057 scopus 로고    scopus 로고
    • The role of DNA methylation in mammalian epigenetics
    • 1:CAS:528:DC%2BD3MXmtVWlsbY%3D 11498573
    • Jones PA, Takai D. The role of DNA methylation in mammalian epigenetics. Science. 2001;293:1068-70.
    • (2001) Science , vol.293 , pp. 1068-1070
    • Jones, P.A.1    Takai, D.2
  • 12
    • 67349255210 scopus 로고    scopus 로고
    • CpG islands - 'a rough guide'
    • 1:CAS:528:DC%2BD1MXmsVCmsrc%3D 19376112
    • Illingworth RS, Bird AP. CpG islands - 'a rough guide'. FEBS Lett. 2009;583:1713-20.
    • (2009) FEBS Lett , vol.583 , pp. 1713-1720
    • Illingworth, R.S.1    Bird, A.P.2
  • 16
    • 84863986133 scopus 로고    scopus 로고
    • Functions of DNA methylation: Islands, start sites, gene bodies and beyond
    • 1:CAS:528:DC%2BC38Xns1SqtLw%3D 22641018
    • Jones PA. Functions of DNA methylation: islands, start sites, gene bodies and beyond. Nat Rev Genet. 2012;13(7):484-92.
    • (2012) Nat Rev Genet. , vol.13 , Issue.7 , pp. 484-492
    • Jones, P.A.1
  • 18
    • 84874194072 scopus 로고    scopus 로고
    • DNA methylation: Roles in mammalian development
    • 1:CAS:528:DC%2BC3sXitlaku7Y%3D 23400093
    • Smith ZD, Meissner A. DNA methylation: roles in mammalian development. Nat Rev Genet. 2013;14:204-20.
    • (2013) Nat Rev Genet , vol.14 , pp. 204-220
    • Smith, Z.D.1    Meissner, A.2
  • 19
    • 84856791176 scopus 로고    scopus 로고
    • Population-specificity of human DNA methylation
    • 1:CAS:528:DC%2BC38XltVeqt7Y%3D 22322129 3334571
    • Fraser HB, Lam LL, Neumann SM, Kobor MS. Population-specificity of human DNA methylation. Genome Biol. 2012;13:R8.
    • (2012) Genome Biol , vol.13 , pp. R8
    • Fraser, H.B.1    Lam, L.L.2    Neumann, S.M.3    Kobor, M.S.4
  • 20
    • 84881083007 scopus 로고    scopus 로고
    • Genome-wide variation of cytosine modifications between European and African populations and the implications for complex traits
    • 1:CAS:528:DC%2BC3sXhsV2lu7%2FM 23792949 3730924
    • Moen EL, Zhang X, Mu W, Delaney SM, Wing C, McQuade J, Myers J, Godley LA, Dolan ME, Zhang W. Genome-wide variation of cytosine modifications between European and African populations and the implications for complex traits. Genetics. 2013;194:987-96.
    • (2013) Genetics , vol.194 , pp. 987-996
    • Moen, E.L.1    Zhang, X.2    Mu, W.3    Delaney, S.M.4    Wing, C.5    McQuade, J.6    Myers, J.7    Godley, L.A.8    Dolan, M.E.9    Zhang, W.10
  • 23
    • 84897489039 scopus 로고    scopus 로고
    • The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts
    • 24555846 4053980
    • Wagner JR, Busche S, Ge B, Kwan T, Pastinen T, Blanchette M. The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts. Genome Biol. 2014;15:R37.
    • (2014) Genome Biol , vol.15 , pp. R37
    • Wagner, J.R.1    Busche, S.2    Ge, B.3    Kwan, T.4    Pastinen, T.5    Blanchette, M.6
  • 24
    • 84907584646 scopus 로고    scopus 로고
    • Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels
    • 25233095 4169251
    • Banovich NE, Lan X, McVicker G, van de Geijn B, Degner JF, Blischak JD, Roux J, Pritchard JK, Gilad Y. Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels. PLoS Genet. 2014;10:e1004663.
    • (2014) PLoS Genet , vol.10 , pp. e1004663
    • Banovich, N.E.1    Lan, X.2    McVicker, G.3    Van De Geijn, B.4    Degner, J.F.5    Blischak, J.D.6    Roux, J.7    Pritchard, J.K.8    Gilad, Y.9
  • 26
    • 79957990635 scopus 로고    scopus 로고
    • Developmental plasticity and developmental origins of non-communicable disease: Theoretical considerations and epigenetic mechanisms
    • 21219925
    • Hanson M, Godfrey KM, Lillycrop KA, Burdge GC, Gluckman PD. Developmental plasticity and developmental origins of non-communicable disease: theoretical considerations and epigenetic mechanisms. Prog Biophys Mol Biol. 2011;106:272-80.
    • (2011) Prog Biophys Mol Biol , vol.106 , pp. 272-280
    • Hanson, M.1    Godfrey, K.M.2    Lillycrop, K.A.3    Burdge, G.C.4    Gluckman, P.D.5
  • 30
    • 70149095265 scopus 로고    scopus 로고
    • Fetal alcohol spectrum disorders: The epigenetic perspective
    • 1:CAS:528:DC%2BD1MXhtFyhsLjN 19458312
    • Haycock PC. Fetal alcohol spectrum disorders: the epigenetic perspective. Biol Reprod. 2009;81:607-17.
    • (2009) Biol Reprod , vol.81 , pp. 607-617
    • Haycock, P.C.1
  • 31
    • 67650704762 scopus 로고    scopus 로고
    • Exposure of mouse embryos to ethanol during preimplantation development: Effect on DNA methylation in the h19 imprinting control region
    • 1:CAS:528:DC%2BD1MXhtFyhsLjO 19279321
    • Haycock PC, Ramsay M. Exposure of mouse embryos to ethanol during preimplantation development: effect on DNA methylation in the h19 imprinting control region. Biol Reprod. 2009;81:618-27.
    • (2009) Biol Reprod , vol.81 , pp. 618-627
    • Haycock, P.C.1    Ramsay, M.2
  • 32
    • 79961007839 scopus 로고    scopus 로고
    • Focus on: Epigenetics and fetal alcohol spectrum disorders
    • 23580038 3860549
    • Kobor MS, Weinberg J. Focus on: epigenetics and fetal alcohol spectrum disorders. Alcohol Res Health. 2011;34:29-37.
    • (2011) Alcohol Res Health , vol.34 , pp. 29-37
    • Kobor, M.S.1    Weinberg, J.2
  • 33
    • 84881508946 scopus 로고    scopus 로고
    • In utero alcohol exposure, epigenetic changes, and their consequences
    • 24313163 3860424
    • Ungerer M, Knezovich J, Ramsay M. In utero alcohol exposure, epigenetic changes, and their consequences. Alcohol Res. 2013;35:37-46.
    • (2013) Alcohol Res , vol.35 , pp. 37-46
    • Ungerer, M.1    Knezovich, J.2    Ramsay, M.3
  • 34
    • 84885006185 scopus 로고    scopus 로고
    • Neurodevelopmental epigenetic etiologies: Insights from studies on mouse models of fetal alcohol spectrum disorders
    • 1:CAS:528:DC%2BC3sXhsV2ntL7O 24059790
    • Laufer BI, Diehl EJ, Singh SM. Neurodevelopmental epigenetic etiologies: insights from studies on mouse models of fetal alcohol spectrum disorders. Epigenomics. 2013;5:465-8.
    • (2013) Epigenomics , vol.5 , pp. 465-468
    • Laufer, B.I.1    Diehl, E.J.2    Singh, S.M.3
  • 35
    • 84874036221 scopus 로고    scopus 로고
    • Epigenetic medicine and fetal alcohol spectrum disorders
    • 1:CAS:528:DC%2BC3sXis1Gjtbw%3D
    • Resendiz M, Chen Y, Ozturk NC, Zhou FC. Epigenetic medicine and fetal alcohol spectrum disorders. Author Manuscr. 2013;5:73-86.
    • (2013) Author Manuscr , vol.5 , pp. 73-86
    • Resendiz, M.1    Chen, Y.2    Ozturk, N.C.3    Zhou, F.C.4
  • 36
    • 77956565876 scopus 로고    scopus 로고
    • Genetic and epigenetic insights into fetal alcohol spectrum disorders
    • 20423530 2873805
    • Ramsay M. Genetic and epigenetic insights into fetal alcohol spectrum disorders. Genome Med. 2010;2:27.
    • (2010) Genome Med , vol.2 , pp. 27
    • Ramsay, M.1
  • 37
    • 0025738978 scopus 로고
    • Ethanol consumption inhibits fetal DNA methylation in mice: Implications for the fetal alcohol syndrome
    • 1:CAS:528:DyaK3MXlt12rsLg%3D 1877725
    • Garro AJ, McBeth DL, Lima V, Lieber CS. Ethanol consumption inhibits fetal DNA methylation in mice: implications for the fetal alcohol syndrome. Alcohol Clin Exp Res. 1991;15:395-8.
    • (1991) Alcohol Clin Exp Res , vol.15 , pp. 395-398
    • Garro, A.J.1    McBeth, D.L.2    Lima, V.3    Lieber, C.S.4
  • 38
    • 73449131530 scopus 로고    scopus 로고
    • Alcohol exposure alters DNA methylation profiles in mouse embryos at early neurulation
    • 1:CAS:528:DC%2BC3cXkvFGisr4%3D 20009564 2805036
    • Liu Y, Balaraman Y, Wang G, Nephew KP, Zhou FC. Alcohol exposure alters DNA methylation profiles in mouse embryos at early neurulation. Epigenetics. 2009;4:500-11.
    • (2009) Epigenetics , vol.4 , pp. 500-511
    • Liu, Y.1    Balaraman, Y.2    Wang, G.3    Nephew, K.P.4    Zhou, F.C.5
  • 39
    • 84880011207 scopus 로고    scopus 로고
    • Long-lasting alterations to DNA methylation and ncRNAs could underlie the effects of fetal alcohol exposure in mice
    • 1:CAS:528:DC%2BC3sXht1Chsr3E 23580197 3701217
    • Laufer BI, Mantha K, Kleiber ML, Diehl EJ, Addison SMF, Singh SM. Long-lasting alterations to DNA methylation and ncRNAs could underlie the effects of fetal alcohol exposure in mice. Dis Model Mech. 2013;6:977-92.
    • (2013) Dis Model Mech , vol.6 , pp. 977-992
    • Laufer, B.I.1    Mantha, K.2    Kleiber, M.L.3    Diehl, E.J.4    Addison, S.M.F.5    Singh, S.M.6
  • 40
    • 84950286817 scopus 로고    scopus 로고
    • Associative DNA methylation changes in children with prenatal alcohol exposure
    • 1:CAS:528:DC%2BC2MXitVejtbrJ 26178076
    • Laufer BI, Kapalanga J, Castellani CA, Diehl EJ, Yan L, Singh SM. Associative DNA methylation changes in children with prenatal alcohol exposure. Epigenomics. 2015;7(8):1259-74.
    • (2015) Epigenomics. , vol.7 , Issue.8 , pp. 1259-1274
    • Laufer, B.I.1    Kapalanga, J.2    Castellani, C.A.3    Diehl, E.J.4    Yan, L.5    Singh, S.M.6
  • 41
    • 79955963309 scopus 로고    scopus 로고
    • Fetal alcohol spectrum disorders: Gene-environment interactions, predictive biomarkers, and the relationship between structural alterations in the brain and functional outcomes
    • 21575841
    • Reynolds JN, Weinberg J, Clarren S, Beaulieu C, Rasmussen C, Kobor M, Dube M-P, Goldowitz D. Fetal alcohol spectrum disorders: gene-environment interactions, predictive biomarkers, and the relationship between structural alterations in the brain and functional outcomes. Semin Pediatr Neurol. 2011;18:49-55.
    • (2011) Semin Pediatr Neurol , vol.18 , pp. 49-55
    • Reynolds, J.N.1    Weinberg, J.2    Clarren, S.3    Beaulieu, C.4    Rasmussen, C.5    Kobor, M.6    Dube, M.-P.7    Goldowitz, D.8
  • 42
    • 84874396923 scopus 로고    scopus 로고
    • Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array
    • 1:CAS:528:DC%2BC3sXnvFaisbg%3D 23452981 3740789
    • Price ME, Cotton AM, Lam LL, Farré P, Emberly E, Brown CJ, Robinson WP, Kobor MS. Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array. Epigenetics Chromatin. 2013;6:4.
    • (2013) Epigenetics Chromatin , vol.6 , pp. 4
    • Price, M.E.1    Cotton, A.M.2    Lam, L.L.3    Farré, P.4    Emberly, E.5    Brown, C.J.6    Robinson, W.P.7    Kobor, M.S.8
  • 44
    • 27544446224 scopus 로고    scopus 로고
    • The international HapMap project web site
    • 1:CAS:528:DC%2BD2MXhtF2itb%2FM 16251469 1310647
    • Thorisson GA, Smith AV, Krishnan L, Stein LD. The international HapMap project web site. Genome Res. 2005;15:1592-3.
    • (2005) Genome Res , vol.15 , pp. 1592-1593
    • Thorisson, G.A.1    Smith, A.V.2    Krishnan, L.3    Stein, L.D.4
  • 51
    • 58149353008 scopus 로고    scopus 로고
    • Promoter specific methylation of the dopamine transporter gene is altered in alcohol dependence and associated with craving
    • 18504048
    • Hillemacher T, Frieling H, Hartl T, Wilhelm J, Kornhuber J, Bleich S. Promoter specific methylation of the dopamine transporter gene is altered in alcohol dependence and associated with craving. J Psychiatr Res. 2009;43:388-92.
    • (2009) J Psychiatr Res , vol.43 , pp. 388-392
    • Hillemacher, T.1    Frieling, H.2    Hartl, T.3    Wilhelm, J.4    Kornhuber, J.5    Bleich, S.6
  • 53
    • 0035133037 scopus 로고    scopus 로고
    • DRD4 and DAT1 as modifying genes in alcoholism: Interaction with novelty seeking on level of alcohol consumption
    • 1:CAS:528:DC%2BD3MXhtlKgtL0%3D 11244477
    • Bau CH, Almeida S, Costa FT, Garcia CE, Elias EP, Ponso AC, Spode A, Hutz MH. DRD4 and DAT1 as modifying genes in alcoholism: interaction with novelty seeking on level of alcohol consumption. Mol Psychiatry. 2001;6:7-9.
    • (2001) Mol Psychiatry , vol.6 , pp. 7-9
    • Bau, C.H.1    Almeida, S.2    Costa, F.T.3    Garcia, C.E.4    Elias, E.P.5    Ponso, A.C.6    Spode, A.7    Hutz, M.H.8
  • 55
    • 27944474776 scopus 로고    scopus 로고
    • ErmineJ: Tool for functional analysis of gene expression data sets
    • Lee HK, Braynen W, Keshav K, Pavlidis P. ErmineJ: tool for functional analysis of gene expression data sets. BMC Bioinform. 2005;6:269.
    • (2005) BMC Bioinform , vol.6 , pp. 269
    • Lee, H.K.1    Braynen, W.2    Keshav, K.3    Pavlidis, P.4
  • 58
    • 59049097051 scopus 로고    scopus 로고
    • The actin-associated protein Palladin is required for development of normal contractile properties of smooth muscle cells derived from embryoid bodies
    • 1:CAS:528:DC%2BD1MXlvFarug%3D%3D 19015263 2629081
    • Jin L, Yoshida T, Ho R, Owens GK, Somlyo AV. The actin-associated protein Palladin is required for development of normal contractile properties of smooth muscle cells derived from embryoid bodies. J Biol Chem. 2009;284:2121-30.
    • (2009) J Biol Chem , vol.284 , pp. 2121-2130
    • Jin, L.1    Yoshida, T.2    Ho, R.3    Owens, G.K.4    Somlyo, A.V.5
  • 60
    • 79956357684 scopus 로고    scopus 로고
    • Prenatal exposure to ethanol: A specific effect on the H19 gene in sperm
    • 1:CAS:528:DC%2BC3MXmvFWmurw%3D 21382472
    • Stouder C, Somm E, Paoloni-Giacobino A. Prenatal exposure to ethanol: a specific effect on the H19 gene in sperm. Reprod Toxicol. 2011;31:507-12.
    • (2011) Reprod Toxicol , vol.31 , pp. 507-512
    • Stouder, C.1    Somm, E.2    Paoloni-Giacobino, A.3
  • 61
    • 69249083264 scopus 로고    scopus 로고
    • Effect of alcohol consumption on CpG methylation in the differentially methylated regions of H19 and IG-DMR in male gametes: Implications for fetal alcohol spectrum disorders
    • 1:CAS:528:DC%2BD1MXht1WhtL%2FF 19519716
    • Ouko LA, Shantikumar K, Knezovich J, Haycock P, Schnugh DJ, Ramsay M. Effect of alcohol consumption on CpG methylation in the differentially methylated regions of H19 and IG-DMR in male gametes: implications for fetal alcohol spectrum disorders. Alcohol Clin Exp Res. 2009;33:1615-27.
    • (2009) Alcohol Clin Exp Res , vol.33 , pp. 1615-1627
    • Ouko, L.A.1    Shantikumar, K.2    Knezovich, J.3    Haycock, P.4    Schnugh, D.J.5    Ramsay, M.6
  • 62
    • 0033036021 scopus 로고    scopus 로고
    • Genomic imprinting: Implications for human disease
    • 1:STN:280:DyaK1M7otVOnuw%3D%3D 10079240 1866410
    • Falls JG, Pulford DJ, Wylie AA, Jirtle RL. Genomic imprinting: implications for human disease. Am J Pathol. 1999;154:635-47.
    • (1999) Am J Pathol , vol.154 , pp. 635-647
    • Falls, J.G.1    Pulford, D.J.2    Wylie, A.A.3    Jirtle, R.L.4
  • 63
    • 84922749037 scopus 로고    scopus 로고
    • Prenatal alcohol exposure: Impact on neuroendocrine-neuroimmune networks
    • C. Cui L. Grandison A. Noronha (eds) Springer Science+Business Media New York
    • Bodnar T, Weinberg J. Prenatal alcohol exposure: impact on neuroendocrine-neuroimmune networks. In: Cui C, Grandison L, Noronha A, editors. Neural-immune interactions in brain function and alcohol related disorders. New York: Springer Science+Business Media; 2013. p. 307-357.
    • (2013) Neural-immune Interactions in Brain Function and Alcohol Related Disorders , pp. 307-357
    • Bodnar, T.1    Weinberg, J.2
  • 64
  • 65
    • 84875850911 scopus 로고    scopus 로고
    • Buccals are likely to be a more informative surrogate tissue than blood for epigenome-wide association studies
    • 1:CAS:528:DC%2BC2cXhs1ans73I 23538714 3674053
    • Lowe R, Gemma C, Beyan H, Hawa MI, Bazeos A, Leslie RD, Montpetit A, Rakyan VK, Ramagopalan SV. Buccals are likely to be a more informative surrogate tissue than blood for epigenome-wide association studies. Epigenetics. 2013;8(4):445-54.
    • (2013) Epigenetics. , vol.8 , Issue.4 , pp. 445-454
    • Lowe, R.1    Gemma, C.2    Beyan, H.3    Hawa, M.I.4    Bazeos, A.5    Leslie, R.D.6    Montpetit, A.7    Rakyan, V.K.8    Ramagopalan, S.V.9
  • 66
    • 84922730203 scopus 로고    scopus 로고
    • Prenatal alcohol exposure alters steady-state and activated gene expression in the adult rat brain
    • 1:CAS:528:DC%2BC2MXivVaqu7c%3D 25684047 4833439
    • Lussier AA, Stepien KA, Neumann SM, Pavlidis P, Kobor MS, Weinberg J. Prenatal alcohol exposure alters steady-state and activated gene expression in the adult rat brain. Alcohol Clin Exp Res. 2015;39:251-61.
    • (2015) Alcohol Clin Exp Res , vol.39 , pp. 251-261
    • Lussier, A.A.1    Stepien, K.A.2    Neumann, S.M.3    Pavlidis, P.4    Kobor, M.S.5    Weinberg, J.6
  • 67
    • 84861186627 scopus 로고    scopus 로고
    • Long-term alterations to the brain transcriptome in a maternal voluntary consumption model of fetal alcohol spectrum disorders
    • 1:CAS:528:DC%2BC38Xntlaisrk%3D 22560501
    • Kleiber ML, Laufer BI, Wright E, Diehl EJ, Singh SM. Long-term alterations to the brain transcriptome in a maternal voluntary consumption model of fetal alcohol spectrum disorders. Brain Res. 2012;1458:18-33.
    • (2012) Brain Res , vol.1458 , pp. 18-33
    • Kleiber, M.L.1    Laufer, B.I.2    Wright, E.3    Diehl, E.J.4    Singh, S.M.5
  • 68
    • 84878791027 scopus 로고    scopus 로고
    • Neurodevelopmental alcohol exposure elicits long-term changes to gene expression that alter distinct molecular pathways dependent on timing of exposure
    • 23497526 3621102
    • Kleiber ML, Mantha K, Stringer RL, Singh SM. Neurodevelopmental alcohol exposure elicits long-term changes to gene expression that alter distinct molecular pathways dependent on timing of exposure. J Neurodev Disord. 2013;5:6.
    • (2013) J Neurodev Disord , vol.5 , pp. 6
    • Kleiber, M.L.1    Mantha, K.2    Stringer, R.L.3    Singh, S.M.4
  • 69
    • 79960556965 scopus 로고    scopus 로고
    • Epigenome-wide association studies for common human diseases
    • 1:CAS:528:DC%2BC3MXovFyjtbg%3D 21747404 3508712
    • Rakyan VK, Down TA, Balding DJ, Beck S. Epigenome-wide association studies for common human diseases. Nat Rev Genet. 2011;12:529-41.
    • (2011) Nat Rev Genet , vol.12 , pp. 529-541
    • Rakyan, V.K.1    Down, T.A.2    Balding, D.J.3    Beck, S.4
  • 73
    • 84872564830 scopus 로고    scopus 로고
    • A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data
    • 1:CAS:528:DC%2BC3sXhtFygsro%3D 23175756
    • Teschendorff AE, Marabita F, Lechner M, Bartlett T, Tegner J, Gomez-Cabrero D, Beck S. A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data. Bioinformatics. 2013;29(2):189-96.
    • (2013) Bioinformatics. , vol.29 , Issue.2 , pp. 189-196
    • Teschendorff, A.E.1    Marabita, F.2    Lechner, M.3    Bartlett, T.4    Tegner, J.5    Gomez-Cabrero, D.6    Beck, S.7
  • 74
    • 78649475003 scopus 로고    scopus 로고
    • Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
    • 1:CAS:528:DC%2BC3cXhsFChu7nM
    • Du P, Zhang X, Huang C-C, Jafari N, Kibbe WA, Hou L, Lin SM. Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis. BMC Bioinform. 2010;11:587.
    • (2010) BMC Bioinform , vol.11 , pp. 587
    • Du, P.1    Zhang, X.2    Huang, C.-C.3    Jafari, N.4    Kibbe, W.A.5    Hou, L.6    Lin, S.M.7
  • 75
    • 84859098571 scopus 로고    scopus 로고
    • The sva package for removing batch effects and other unwanted variation in high-throughput experiments
    • 1:CAS:528:DC%2BC38Xks1Sisb4%3D 22257669 3307112
    • Leek JT, Johnson WE, Parker HS, Jaffe AE, Storey JD. The sva package for removing batch effects and other unwanted variation in high-throughput experiments. Bioinformatics. 2012;28:882-3.
    • (2012) Bioinformatics , vol.28 , pp. 882-883
    • Leek, J.T.1    Johnson, W.E.2    Parker, H.S.3    Jaffe, A.E.4    Storey, J.D.5
  • 76
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Smyth GK. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol. 2004;3:3.
    • (2004) Stat Appl Genet Mol Biol. , vol.3 , pp. 3
    • Smyth, G.K.1
  • 77
    • 84978433190 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Ser B. 1995;57:289-300.
    • (1995) J R Stat Soc ser B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 79
    • 3042514191 scopus 로고    scopus 로고
    • Coexpression analysis of human genes across many microarray data sets
    • 1:CAS:528:DC%2BD2cXkvFGhtrY%3D 15173114 419787
    • Lee HK, Hsu AK, Sajdak J, Qin J, Pavlidis P. Coexpression analysis of human genes across many microarray data sets. Genome Res. 2004;14:1085-94.
    • (2004) Genome Res , vol.14 , pp. 1085-1094
    • Lee, H.K.1    Hsu, A.K.2    Sajdak, J.3    Qin, J.4    Pavlidis, P.5
  • 81
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: New features for data integration and network visualization
    • 1:CAS:528:DC%2BC3MXhs1GisL0%3D 21149340
    • Smoot ME, Ono K, Ruscheinski J, Wang P-L, Ideker T. Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics. 2011;27:431-2.
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.E.1    Ono, K.2    Ruscheinski, J.3    Wang, P.-L.4    Ideker, T.5


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