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Volumn 98, Issue 4, 2011, Pages 288-295

High density DNA methylation array with single CpG site resolution

Author keywords

Array; DNA methylation; Epigenetics; Genome wide; Infinium; Methylation profiling

Indexed keywords

BISULFITE; GENOMIC DNA;

EID: 80053304450     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2011.07.007     Document Type: Article
Times cited : (1311)

References (43)
  • 2
    • 23044514626 scopus 로고    scopus 로고
    • Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
    • Weber M., Davies J.J., Wittig D., Oakeley E.J., Haase M., Lam W.L., Schubeler D. Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat. Genet. 2005, 37:853-862.
    • (2005) Nat. Genet. , vol.37 , pp. 853-862
    • Weber, M.1    Davies, J.J.2    Wittig, D.3    Oakeley, E.J.4    Haase, M.5    Lam, W.L.6    Schubeler, D.7
  • 4
    • 27144500218 scopus 로고    scopus 로고
    • Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis
    • Meissner A., Gnirke A., Bell G.W., Ramsahoye B., Lander E.S., Jaenisch R. Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis. Nucleic Acids Res. 2005, 33:5868-5877.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 5868-5877
    • Meissner, A.1    Gnirke, A.2    Bell, G.W.3    Ramsahoye, B.4    Lander, E.S.5    Jaenisch, R.6
  • 5
    • 33748055105 scopus 로고    scopus 로고
    • MIRA-assisted microarray analysis, a new technology for the determination of DNA methylation patterns, identifies frequent methylation of homeodomain-containing genes in lung cancer cells
    • Rauch T., Li H., Wu X., Pfeifer G.P. MIRA-assisted microarray analysis, a new technology for the determination of DNA methylation patterns, identifies frequent methylation of homeodomain-containing genes in lung cancer cells. Cancer Res. 2006, 66:7939-7947.
    • (2006) Cancer Res. , vol.66 , pp. 7939-7947
    • Rauch, T.1    Li, H.2    Wu, X.3    Pfeifer, G.P.4
  • 10
    • 77950409567 scopus 로고    scopus 로고
    • Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing
    • Ruike Y., Imanaka Y., Sato F., Shimizu K., Tsujimoto G. Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing. BMC Genomics 2010, 11:137.
    • (2010) BMC Genomics , vol.11 , pp. 137
    • Ruike, Y.1    Imanaka, Y.2    Sato, F.3    Shimizu, K.4    Tsujimoto, G.5
  • 11
    • 77957948773 scopus 로고    scopus 로고
    • Taking the measure of the methylome
    • Beck S. Taking the measure of the methylome. Nat. Biotechnol. 2010, 28:1026-1028.
    • (2010) Nat. Biotechnol. , vol.28 , pp. 1026-1028
    • Beck, S.1
  • 12
    • 77952085655 scopus 로고    scopus 로고
    • Profiling DNA methylomes from microarray to genome-scale sequencing
    • Huang Y.W., Huang T.H., Wang L.S. Profiling DNA methylomes from microarray to genome-scale sequencing. Technol. Cancer Res. Treat. 2010, 9:139-147.
    • (2010) Technol. Cancer Res. Treat. , vol.9 , pp. 139-147
    • Huang, Y.W.1    Huang, T.H.2    Wang, L.S.3
  • 13
    • 77249137168 scopus 로고    scopus 로고
    • Principles and challenges of genome-wide DNA methylation analysis
    • Laird P.W. Principles and challenges of genome-wide DNA methylation analysis. Nat. Rev. Genet. 2010, 11:191-203.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 191-203
    • Laird, P.W.1
  • 17
    • 77954238686 scopus 로고    scopus 로고
    • Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome
    • Shoemaker R., Deng J., Wang W., Zhang K. Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome. Genome Res. 2010, 20:883-889.
    • (2010) Genome Res. , vol.20 , pp. 883-889
    • Shoemaker, R.1    Deng, J.2    Wang, W.3    Zhang, K.4
  • 21
    • 72849117741 scopus 로고    scopus 로고
    • A species-generalized probabilistic model-based definition of CpG islands
    • Irizarry R.A., Wu H., Feinberg A.P. A species-generalized probabilistic model-based definition of CpG islands. Mamm. Genome 2009, 20:674-680.
    • (2009) Mamm. Genome , vol.20 , pp. 674-680
    • Irizarry, R.A.1    Wu, H.2    Feinberg, A.P.3
  • 22
    • 67650989239 scopus 로고    scopus 로고
    • A nearly exhaustive search for CpG islands on whole chromosomes
    • Hsieh F., Chen S.C., Pollard K. A nearly exhaustive search for CpG islands on whole chromosomes. Int. J. Biostat. 2009, 5:1.
    • (2009) Int. J. Biostat. , vol.5 , pp. 1
    • Hsieh, F.1    Chen, S.C.2    Pollard, K.3
  • 35
    • 0037133565 scopus 로고    scopus 로고
    • Comprehensive analysis of CpG islands in human chromosomes 21 and 22
    • Takai D., Jones P.A. Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:3740-3745.
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 3740-3745
    • Takai, D.1    Jones, P.A.2
  • 36
  • 38
    • 79960556965 scopus 로고    scopus 로고
    • Epigenome-wide association studies for common human diseases
    • Rakyan V.K., Down T.A., Balding D.J., Beck S. Epigenome-wide association studies for common human diseases. Nat. Rev. Genet. 2011, 12:529-541.
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 529-541
    • Rakyan, V.K.1    Down, T.A.2    Balding, D.J.3    Beck, S.4
  • 40
    • 77956896334 scopus 로고    scopus 로고
    • Genome-wide analysis of DNA methylation and gene expression changes in the mouse lung following subchronic arsenate exposure
    • Boellmann F., Zhang L., Clewell H.J., Schroth G.P., Kenyon E.M., Andersen M.E., Thomas R.S. Genome-wide analysis of DNA methylation and gene expression changes in the mouse lung following subchronic arsenate exposure. Toxicol. Sci. 2010, 117:404-417.
    • (2010) Toxicol. Sci. , vol.117 , pp. 404-417
    • Boellmann, F.1    Zhang, L.2    Clewell, H.J.3    Schroth, G.P.4    Kenyon, E.M.5    Andersen, M.E.6    Thomas, R.S.7
  • 42
    • 33847057776 scopus 로고    scopus 로고
    • Whole genome genotyping technologies on the BeadArray platform
    • Steemers F.J., Gunderson K.L. Whole genome genotyping technologies on the BeadArray platform. Biotechnol. J. 2007, 2:41-49.
    • (2007) Biotechnol. J. , vol.2 , pp. 41-49
    • Steemers, F.J.1    Gunderson, K.L.2
  • 43
    • 70449101927 scopus 로고    scopus 로고
    • Whole-genome genotyping on bead arrays
    • Gunderson K.L. Whole-genome genotyping on bead arrays. Methods Mol. Biol. 2009, 529:197-213.
    • (2009) Methods Mol. Biol. , vol.529 , pp. 197-213
    • Gunderson, K.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.