메뉴 건너뛰기




Volumn 44, Issue D1, 2016, Pages D294-D300

ELM 2016 - Data update and new functionality of the eukaryotic linear motif resource

Author keywords

[No Author keywords available]

Indexed keywords

CASEIN KINASE I; GLYCOGEN SYNTHASE KINASE;

EID: 84976897335     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkv1291     Document Type: Article
Times cited : (250)

References (39)
  • 2
    • 84902446852 scopus 로고    scopus 로고
    • Short linear motifs: Ubiquitous and functionally diverse protein interaction modules directing cell regulation
    • Van Roey, K., Uyar, B., Weatheritt, R. J., Dinkel, H., Seiler, M., Budd, A., Gibson, T. J. and Davey, N. E. (2014) Short linear motifs: ubiquitous and functionally diverse protein interaction modules directing cell regulation. Chem. Rev., 114, 6733-6778.
    • (2014) Chem. Rev. , vol.114 , pp. 6733-6778
    • Van Roey, K.1    Uyar, B.2    Weatheritt, R.J.3    Dinkel, H.4    Seiler, M.5    Budd, A.6    Gibson, T.J.7    Davey, N.E.8
  • 3
    • 14644435825 scopus 로고    scopus 로고
    • Intrinsically unstructured proteins and their functions
    • Dyson, H. J. and Wright, P. E. (2005) Intrinsically unstructured proteins and their functions. Nat. Rev. Mol. Cell Biol., 6, 197-208.
    • (2005) Nat. Rev. Mol. Cell Biol. , vol.6 , pp. 197-208
    • Dyson, H.J.1    Wright, P.E.2
  • 4
    • 77949916296 scopus 로고    scopus 로고
    • Understanding protein non-folding
    • Uversky, V. N. and Dunker, A. K. (2010) Understanding protein non-folding. Biochim. Biophys. Acta, 1804, 1231-1264.
    • (2010) Biochim. Biophys. Acta , vol.1804 , pp. 1231-1264
    • Uversky, V.N.1    Dunker, A.K.2
  • 6
    • 84876158670 scopus 로고    scopus 로고
    • The switches-ELM resource: A compendium of conditional regulatory interaction interfaces
    • Van Roey, K., Dinkel, H., Weatheritt, R. J., Gibson, T. J. and Davey, N. E. (2013) The switches-ELM resource: a compendium of conditional regulatory interaction interfaces. Sci. Signal., 6, rs7.
    • (2013) Sci. Signal. , vol.6 , pp. rs7
    • Van Roey, K.1    Dinkel, H.2    Weatheritt, R.J.3    Gibson, T.J.4    Davey, N.E.5
  • 9
    • 84055213687 scopus 로고    scopus 로고
    • A global survey of CRM1-dependent nuclear export sequences in the human deubiquitinase family
    • García-Santisteban, I., Bañuelos, S. and Rodríguez, J. A. (2012) A global survey of CRM1-dependent nuclear export sequences in the human deubiquitinase family. Biochem. J., 441, 209-217.
    • (2012) Biochem. J. , vol.441 , pp. 209-217
    • García-Santisteban, I.1    Bañuelos, S.2    Rodríguez, J.A.3
  • 10
    • 84925400639 scopus 로고    scopus 로고
    • Insect inhibitor-of-apoptosis (IAP) proteins are negatively regulated by signal-induced N-terminal degrons absent within viral IAP proteins
    • Vandergaast, R., Mitchell, J. K., Byers, N. M. and Friesen, P. D. (2015) Insect inhibitor-of-apoptosis (IAP) proteins are negatively regulated by signal-induced N-terminal degrons absent within viral IAP proteins. J. Virol., 89, 4481-4493.
    • (2015) J. Virol. , vol.89 , pp. 4481-4493
    • Vandergaast, R.1    Mitchell, J.K.2    Byers, N.M.3    Friesen, P.D.4
  • 11
    • 84930792620 scopus 로고    scopus 로고
    • Interaction analysis through proteomic phage display
    • Sundell, G. N. and Ivarsson, Y. (2014) Interaction analysis through proteomic phage display. Biomed. Res. Int., 2014, 2542-2547.
    • (2014) Biomed. Res. Int. , vol.2014 , pp. 2542-2547
    • Sundell, G.N.1    Ivarsson, Y.2
  • 12
    • 84873802661 scopus 로고    scopus 로고
    • Systematic analysis of somatic mutations in phosphorylation signaling predicts novel cancer drivers
    • Reimand, J. and Bader, G. D. (2013) Systematic analysis of somatic mutations in phosphorylation signaling predicts novel cancer drivers. Mol. Syst. Biol., 9, 637.
    • (2013) Mol. Syst. Biol. , vol.9 , pp. 637
    • Reimand, J.1    Bader, G.D.2
  • 14
    • 84907020124 scopus 로고    scopus 로고
    • Functional characterization of G-protein-coupled receptors: A bioinformatics approach
    • Tovo-Rodrigues, L., Roux, A., Hutz, M. H., Rohde, L. A. and Woods, A. S. (2014) Functional characterization of G-protein-coupled receptors: a bioinformatics approach. Neuroscience, 277, 764-779.
    • (2014) Neuroscience , vol.277 , pp. 764-779
    • Tovo-Rodrigues, L.1    Roux, A.2    Hutz, M.H.3    Rohde, L.A.4    Woods, A.S.5
  • 15
    • 84883418471 scopus 로고    scopus 로고
    • Predicting binding within disordered protein regions to structurally characterised peptide-binding domains
    • Khan, W., Duffy, F., Pollastri, G., Shields, D. C. and Mooney, C. (2013) Predicting binding within disordered protein regions to structurally characterised peptide-binding domains. PLoS One, 8, e72838.
    • (2013) PLoS One , vol.8 , pp. e72838
    • Khan, W.1    Duffy, F.2    Pollastri, G.3    Shields, D.C.4    Mooney, C.5
  • 16
    • 84930606332 scopus 로고    scopus 로고
    • Predicting peptide-mediated interactions on a genome-wide scale
    • Chen, T. S., Petrey, D., Garzon, J. I. and Honig, B. (2015) Predicting peptide-mediated interactions on a genome-wide scale. PLoS Comput. Biol., 11, e1004248.
    • (2015) PLoS Comput. Biol. , vol.11 , pp. e1004248
    • Chen, T.S.1    Petrey, D.2    Garzon, J.I.3    Honig, B.4
  • 17
    • 84926050157 scopus 로고    scopus 로고
    • Convergent evolution and mimicry of protein linear motifs in host-pathogen interactions
    • Chemes, L. B., De Prat-Gay, G. and Sánchez, I. E. (2015) Convergent evolution and mimicry of protein linear motifs in host-pathogen interactions. Curr. Opin. Struct. Biol., 32, 91-101.
    • (2015) Curr. Opin. Struct. Biol. , vol.32 , pp. 91-101
    • Chemes, L.B.1    De Prat-Gay, G.2    Sánchez, I.E.3
  • 18
    • 84963980075 scopus 로고    scopus 로고
    • How pathogens use linear motifs to perturb host cell networks
    • Via, A., Uyar, B., Brun, C. and Zanzoni, A. (2015) How pathogens use linear motifs to perturb host cell networks. Trends Biochem. Sci., 40, 36-48.
    • (2015) Trends Biochem. Sci. , vol.40 , pp. 36-48
    • Via, A.1    Uyar, B.2    Brun, C.3    Zanzoni, A.4
  • 19
    • 84890531914 scopus 로고    scopus 로고
    • The cyclin-dependent kinase ortholog pUL97 of human cytomegalovirus interacts with cyclins
    • Graf, L., Webel, R., Wagner, S., Hamilton, S. T., Rawlinson, W. D., Sticht, H. and Marschall, M. (2013) The cyclin-dependent kinase ortholog pUL97 of human cytomegalovirus interacts with cyclins. Viruses, 5, 3213-3230.
    • (2013) Viruses , vol.5 , pp. 3213-3230
    • Graf, L.1    Webel, R.2    Wagner, S.3    Hamilton, S.T.4    Rawlinson, W.D.5    Sticht, H.6    Marschall, M.7
  • 20
    • 84902318220 scopus 로고    scopus 로고
    • Use of host-like peptide motifs in viral proteins is a prevalent strategy in host-virus interaction
    • Hagai, T., Azia, A., Babu, M. M. and Andino, R. (2014) Use of host-like peptide motifs in viral proteins is a prevalent strategy in host-virus interaction. Cell Rep., 7, 1729-1739.
    • (2014) Cell Rep. , vol.7 , pp. 1729-1739
    • Hagai, T.1    Azia, A.2    Babu, M.M.3    Andino, R.4
  • 23
    • 84946069451 scopus 로고    scopus 로고
    • UniProt: A hub for protein information
    • The UniProt Consortium. (2015) UniProt: a hub for protein information. Nucleic Acids Res., 43, D204-D212.
    • (2015) Nucleic Acids Res. , vol.43 , pp. D204-D212
    • The UniProt Consortium1
  • 27
    • 84864465529 scopus 로고    scopus 로고
    • Ielm-a web server to explore short linear motif-mediated interactions
    • Weatheritt, R. J., Jehl, P., Dinkel, H. and Gibson, T. J. (2012) iELM-a web server to explore short linear motif-mediated interactions. Nucleic Acids Res., 40, W364-W369.
    • (2012) Nucleic Acids Res. , vol.40 , pp. W364-W369
    • Weatheritt, R.J.1    Jehl, P.2    Dinkel, H.3    Gibson, T.J.4
  • 29
  • 30
    • 84907033567 scopus 로고    scopus 로고
    • Proteome-wide analysis of human disease mutations in short linear motifs: Neglected players in cancer?
    • Uyar, B., Weatheritt, R. J., Dinkel, H., Davey, N. E. and Gibson, T. J. (2014) Proteome-wide analysis of human disease mutations in short linear motifs: neglected players in cancer? Mol. Biosyst., 10, 2626-2642.
    • (2014) Mol. Biosyst. , vol.10 , pp. 2626-2642
    • Uyar, B.1    Weatheritt, R.J.2    Dinkel, H.3    Davey, N.E.4    Gibson, T.J.5
  • 31
    • 77951952886 scopus 로고    scopus 로고
    • Easy retrieval of single amino-acid polymorphisms and phenotype information using SwissVar
    • Mottaz, A., David, F. P. A., Veuthey, A.-L. and Yip, Y. L. (2010) Easy retrieval of single amino-acid polymorphisms and phenotype information using SwissVar. Bioinformatics, 26, 851-852.
    • (2010) Bioinformatics , vol.26 , pp. 851-852
    • Mottaz, A.1    David, F.P.A.2    Veuthey, A.-L.3    Yip, Y.L.4
  • 33
    • 67650230896 scopus 로고    scopus 로고
    • Wnt/beta-catenin signaling: Components, mechanisms, and diseases
    • MacDonald, B. T., Tamai, K. and He, X. (2009) Wnt/beta-catenin signaling: components, mechanisms, and diseases. Dev. Cell, 17, 9-26.
    • (2009) Dev. Cell , vol.17 , pp. 9-26
    • MacDonald, B.T.1    Tamai, K.2    He, X.3
  • 35
    • 0033068154 scopus 로고    scopus 로고
    • The SCFbeta-TRCP-ubiquitin ligase complex associates specifically with phosphorylated destruction motifs in IkappaBalpha and beta-catenin and stimulates IkappaBalpha ubiquitination in vitro
    • Winston, J. T., Strack, P., Beer-Romero, P., Chu, C. Y., Elledge, S. J. and Harper, J. W. (1999) The SCFbeta-TRCP-ubiquitin ligase complex associates specifically with phosphorylated destruction motifs in IkappaBalpha and beta-catenin and stimulates IkappaBalpha ubiquitination in vitro. Genes Dev., 13, 270-283.
    • (1999) Genes Dev. , vol.13 , pp. 270-283
    • Winston, J.T.1    Strack, P.2    Beer-Romero, P.3    Chu, C.Y.4    Elledge, S.J.5    Harper, J.W.6
  • 36
    • 2342430345 scopus 로고    scopus 로고
    • LDL receptor-related proteins 5 and 6 in Wnt/beta-catenin signaling: Arrows point the way
    • He, X., Semenov, M., Tamai, K. and Zeng, X. (2004) LDL receptor-related proteins 5 and 6 in Wnt/beta-catenin signaling: arrows point the way. Development, 131, 1663-1677.
    • (2004) Development , vol.131 , pp. 1663-1677
    • He, X.1    Semenov, M.2    Tamai, K.3    Zeng, X.4
  • 37
    • 58549108026 scopus 로고    scopus 로고
    • Fine-tuning of nuclear-catenin by Chibby and 14-3-3
    • Takemaru, K.-I., Fischer, V. and Li, F.-Q. (2009) Fine-tuning of nuclear-catenin by Chibby and 14-3-3. Cell Cycle, 8, 210-213.
    • (2009) Cell Cycle , vol.8 , pp. 210-213
    • Takemaru, K.-I.1    Fischer, V.2    Li, F.-Q.3
  • 38
    • 84904469894 scopus 로고    scopus 로고
    • A million peptide motifs for the molecular biologist
    • Tompa, P., Davey, N. E., Gibson, T. J. and Babu, M. M. (2014) A million peptide motifs for the molecular biologist. Mol. Cell, 55, 161-169.
    • (2014) Mol. Cell , vol.55 , pp. 161-169
    • Tompa, P.1    Davey, N.E.2    Gibson, T.J.3    Babu, M.M.4
  • 39
    • 84958125950 scopus 로고    scopus 로고
    • Experimental detection of short regulatory motifs in eukaryotic proteins: Tips for good practice as well as for bad
    • Gibson, T. J., Dinkel, H., Van Roey, K. and Diella, F. (2015) Experimental detection of short regulatory motifs in eukaryotic proteins: tips for good practice as well as for bad. Cell Commun. Signal, 13, 42.
    • (2015) Cell Commun. Signal , vol.13 , pp. 42
    • Gibson, T.J.1    Dinkel, H.2    Van Roey, K.3    Diella, F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.