S1-DRIP-seq identifies high expression and polyA tracts as major contributors to R-loop formation

Genes and Development

Volumn 30, Issue 11, 2016, Pages 1327-1338

  Wahba, Lamia ^a,c   Costantino, Lorenzo ^a   Tan, Frederick J ^b   Zimmer, Anjali ^a   Koshland, Douglas ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b GEOPHYSICAL LABORATORY   (United States)

^c STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

DNA:RNA hybrids; polyA tracts; R loops; RNase H; Transcription

Indexed keywords

MESSENGER RNA; NUCLEASE S1; RIBONUCLEASE H; RIBOSOME DNA; TRANSFER RNA; FUNGAL DNA; FUNGAL RNA; HISTONE; POLYADENYLIC ACID;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ARTICLE; CONTROLLED STUDY; DNA BASE COMPOSITION; DNA RNA HYBRIDIZATION; DNA SEQUENCE; DNA STRUCTURE; DNA TEMPLATE; FUNGAL GENOME; GENE EXPRESSION; GENE MAPPING; GENETIC MANIPULATION; GENETIC TRANSCRIPTION; IMMUNOPRECIPITATION; IN VIVO STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; R LOOP; RETROPOSON; RNA SEQUENCE; S1 NUCLEASE DNA RNA IMMUNOPRECIPITATION WITH DEEP SEQUENCING; SACCHAROMYCES CEREVISIAE; SIGNAL NOISE RATIO; TANDEM REPEAT; TELOMERE; CHEMISTRY; CHROMOSOMAL MAPPING; GENETICS; GENOMICS; METABOLISM; PROTEIN CONFORMATION;

CHROMOSOME MAPPING; DNA, FUNGAL; GENE EXPRESSION; GENOME, FUNGAL; GENOMICS; HISTONES; POLY A; PROTEIN CONFORMATION; RNA, FUNGAL; SACCHAROMYCES CEREVISIAE; SINGLE-STRAND SPECIFIC DNA AND RNA ENDONUCLEASES;

EID: 84974623814     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.280834.116     Document Type: Article

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