메뉴 건너뛰기




Volumn 36, Issue , 2016, Pages 41-49

Mechanisms, timescales and principles of trans-generational epigenetic inheritance in animals

Author keywords

[No Author keywords available]

Indexed keywords

DILUTION; EPIGENETICS; FEEDBACK SYSTEM; GENE REPRESSION; GERM CELL; HETEROCHROMATIN; HISTONE MODIFICATION; HUMAN; INHERITANCE; LONG TERM MEMORY; MOLECULAR EVOLUTION; MOLECULAR MODEL; NONHUMAN; PRIORITY JOURNAL; REVIEW; SHORT TERM MEMORY; SOMATIC CELL; ANIMAL; CHROMATIN; GENETIC EPIGENESIS; GENETICS; GENOTYPE ENVIRONMENT INTERACTION; NUCLEOTIDE REPEAT; PHENOTYPE;

EID: 84968698090     PISSN: 0959437X     EISSN: 18790380     Source Type: Journal    
DOI: 10.1016/j.gde.2016.04.001     Document Type: Review
Times cited : (55)

References (72)
  • 4
    • 84919866763 scopus 로고    scopus 로고
    • Environmentally induced epigenetic transgenerational inheritance of disease susceptibility
    • Nilsson E.E., Skinner M.K. Environmentally induced epigenetic transgenerational inheritance of disease susceptibility. Transl Res 2015, 165:12-17.
    • (2015) Transl Res , vol.165 , pp. 12-17
    • Nilsson, E.E.1    Skinner, M.K.2
  • 5
    • 84897139220 scopus 로고    scopus 로고
    • Transgenerational epigenetic inheritance: myths and mechanisms
    • Heard E., Martienssen R.A. Transgenerational epigenetic inheritance: myths and mechanisms. Cell 2014, 157:95-109.
    • (2014) Cell , vol.157 , pp. 95-109
    • Heard, E.1    Martienssen, R.A.2
  • 7
    • 84898892512 scopus 로고    scopus 로고
    • DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos
    • Messerschmidt D.M., Knowles B.B., Solter D. DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos. Genes Dev 2014, 28:812-828.
    • (2014) Genes Dev , vol.28 , pp. 812-828
    • Messerschmidt, D.M.1    Knowles, B.B.2    Solter, D.3
  • 8
    • 79960037025 scopus 로고    scopus 로고
    • Epigenetic reprogramming in the germline: towards the ground state of the epigenome
    • Hajkova P. Epigenetic reprogramming in the germline: towards the ground state of the epigenome. Philos Trans R Soc Lond B Biol Sci 2011, 366:2266-2273.
    • (2011) Philos Trans R Soc Lond B Biol Sci , vol.366 , pp. 2266-2273
    • Hajkova, P.1
  • 10
  • 12
    • 0023057540 scopus 로고
    • Caenorhabditis elegans DNA does not contain 5-methylcytosine at any time during development or aging
    • Simpson V.J., Johnson T.E., Hammen R.F. Caenorhabditis elegans DNA does not contain 5-methylcytosine at any time during development or aging. Nucleic Acids Res 1986, 14:6711-6719.
    • (1986) Nucleic Acids Res , vol.14 , pp. 6711-6719
    • Simpson, V.J.1    Johnson, T.E.2    Hammen, R.F.3
  • 13
    • 84898871225 scopus 로고    scopus 로고
    • Cytosine DNA methylation is found in Drosophila melanogaster but absent in Saccharomyces cerevisiae, Schizosaccharomyces pombe, and other yeast species
    • Capuano F., Mulleder M., Kok R., Blom H.J., Ralser M. Cytosine DNA methylation is found in Drosophila melanogaster but absent in Saccharomyces cerevisiae, Schizosaccharomyces pombe, and other yeast species. Anal Chem 2014, 86:3697-3702.
    • (2014) Anal Chem , vol.86 , pp. 3697-3702
    • Capuano, F.1    Mulleder, M.2    Kok, R.3    Blom, H.J.4    Ralser, M.5
  • 14
    • 84866313140 scopus 로고    scopus 로고
    • Novel small noncoding RNAs in mouse spermatozoa, zygotes and early embryos
    • Kawano M., Kawaji H., Grandjean V., Kiani J., Rassoulzadegan M. Novel small noncoding RNAs in mouse spermatozoa, zygotes and early embryos. PLoS One 2012, 7:e44542.
    • (2012) PLoS One , vol.7 , pp. e44542
    • Kawano, M.1    Kawaji, H.2    Grandjean, V.3    Kiani, J.4    Rassoulzadegan, M.5
  • 16
    • 84905743193 scopus 로고    scopus 로고
    • Paternal RNA contributions in the Caenorhabditis elegans zygote
    • Stoeckius M., Grun D., Rajewsky N. Paternal RNA contributions in the Caenorhabditis elegans zygote. EMBO J 2014, 33:1740-1750.
    • (2014) EMBO J , vol.33 , pp. 1740-1750
    • Stoeckius, M.1    Grun, D.2    Rajewsky, N.3
  • 17
    • 84964694818 scopus 로고    scopus 로고
    • The small RNA content of human sperm reveals pseudogene-derived piRNAs complementary to protein-coding genes
    • Pantano L., Jodar M., Bak M., Ballesca J.L., Tommerup N., Oliva R., Vavouri T. The small RNA content of human sperm reveals pseudogene-derived piRNAs complementary to protein-coding genes. RNA 2015, 21:1085-1095.
    • (2015) RNA , vol.21 , pp. 1085-1095
    • Pantano, L.1    Jodar, M.2    Bak, M.3    Ballesca, J.L.4    Tommerup, N.5    Oliva, R.6    Vavouri, T.7
  • 18
    • 84877935103 scopus 로고    scopus 로고
    • Paternal stress exposure alters sperm microRNA content and reprograms offspring HPA stress axis regulation
    • Rodgers A.B., Morgan C.P., Bronson S.L., Revello S., Bale T.L. Paternal stress exposure alters sperm microRNA content and reprograms offspring HPA stress axis regulation. J Neurosci 2013, 33:9003-9012.
    • (2013) J Neurosci , vol.33 , pp. 9003-9012
    • Rodgers, A.B.1    Morgan, C.P.2    Bronson, S.L.3    Revello, S.4    Bale, T.L.5
  • 22
    • 84946594595 scopus 로고    scopus 로고
    • Transgenerational epigenetic programming via sperm microRNA recapitulates effects of paternal stress
    • Rodgers A.B., Morgan C.P., Leu N.A., Bale T.L. Transgenerational epigenetic programming via sperm microRNA recapitulates effects of paternal stress. Proc Natl Acad Sci U S A 2015, 112:13699-13704.
    • (2015) Proc Natl Acad Sci U S A , vol.112 , pp. 13699-13704
    • Rodgers, A.B.1    Morgan, C.P.2    Leu, N.A.3    Bale, T.L.4
  • 25
    • 84918803645 scopus 로고    scopus 로고
    • Sperm epigenomics: challenges and opportunities
    • Casas E., Vavouri T. Sperm epigenomics: challenges and opportunities. Front Genet 2014, 5:330.
    • (2014) Front Genet , vol.5 , pp. 330
    • Casas, E.1    Vavouri, T.2
  • 26
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
    • Fire A., Xu S., Montgomery M.K., Kostas S.A., Driver S.E., Mello C.C. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 1998, 391:806-811.
    • (1998) Nature , vol.391 , pp. 806-811
    • Fire, A.1    Xu, S.2    Montgomery, M.K.3    Kostas, S.A.4    Driver, S.E.5    Mello, C.C.6
  • 27
    • 59449100704 scopus 로고    scopus 로고
    • Transmission dynamics of heritable silencing induced by double-stranded RNA in Caenorhabditis elegans
    • Alcazar R.M., Lin R., Fire A.Z. Transmission dynamics of heritable silencing induced by double-stranded RNA in Caenorhabditis elegans. Genetics 2008, 180:1275-1288.
    • (2008) Genetics , vol.180 , pp. 1275-1288
    • Alcazar, R.M.1    Lin, R.2    Fire, A.Z.3
  • 32
    • 84863631177 scopus 로고    scopus 로고
    • PiRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline
    • Shirayama M., Seth M., Lee H.C., Gu W., Ishidate T., Conte D., Mello C.C. piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline. Cell 2012, 150:65-77.
    • (2012) Cell , vol.150 , pp. 65-77
    • Shirayama, M.1    Seth, M.2    Lee, H.C.3    Gu, W.4    Ishidate, T.5    Conte, D.6    Mello, C.C.7
  • 33
    • 84890818459 scopus 로고    scopus 로고
    • The C. elegans CSR-1 argonaute pathway counteracts epigenetic silencing to promote germline gene expression
    • Seth M., Shirayama M., Gu W., Ishidate T., Conte D., Mello C.C. The C. elegans CSR-1 argonaute pathway counteracts epigenetic silencing to promote germline gene expression. Dev Cell 2013, 27:656-663.
    • (2013) Dev Cell , vol.27 , pp. 656-663
    • Seth, M.1    Shirayama, M.2    Gu, W.3    Ishidate, T.4    Conte, D.5    Mello, C.C.6
  • 34
    • 84890836064 scopus 로고    scopus 로고
    • Protection of germline gene expression by the C. elegans Argonaute CSR-1
    • Wedeles C.J., Wu M.Z., Claycomb J.M. Protection of germline gene expression by the C. elegans Argonaute CSR-1. Dev Cell 2013, 27:664-671.
    • (2013) Dev Cell , vol.27 , pp. 664-671
    • Wedeles, C.J.1    Wu, M.Z.2    Claycomb, J.M.3
  • 35
    • 84937727106 scopus 로고    scopus 로고
    • Natural RNA interference directs a heritable response to the environment
    • Schott D., Yanai I., Hunter C.P. Natural RNA interference directs a heritable response to the environment. Sci Rep 2014, 4:7387.
    • (2014) Sci Rep , vol.4 , pp. 7387
    • Schott, D.1    Yanai, I.2    Hunter, C.P.3
  • 38
    • 79953741829 scopus 로고    scopus 로고
    • A role for Set1/MLL-related components in epigenetic regulation of the Caenorhabditis elegans germ line
    • Li T., Kelly W.G. A role for Set1/MLL-related components in epigenetic regulation of the Caenorhabditis elegans germ line. PLoS Genet 2011, 7:e1001349.
    • (2011) PLoS Genet , vol.7 , pp. e1001349
    • Li, T.1    Kelly, W.G.2
  • 39
    • 79959834136 scopus 로고    scopus 로고
    • Epigenetic patterns maintained in early Caenorhabditis elegans embryos can be established by gene activity in the parental germ cells
    • Arico J.K., Katz D.J., van der Vlag J., Kelly W.G. Epigenetic patterns maintained in early Caenorhabditis elegans embryos can be established by gene activity in the parental germ cells. PLoS Genet 2011, 7:e1001391.
    • (2011) PLoS Genet , vol.7 , pp. e1001391
    • Arico, J.K.1    Katz, D.J.2    van der Vlag, J.3    Kelly, W.G.4
  • 42
    • 33947303168 scopus 로고    scopus 로고
    • Transposable elements and the epigenetic regulation of the genome
    • Slotkin R.K., Martienssen R. Transposable elements and the epigenetic regulation of the genome. Nat Rev Genet 2007, 8:272-285.
    • (2007) Nat Rev Genet , vol.8 , pp. 272-285
    • Slotkin, R.K.1    Martienssen, R.2
  • 44
    • 84873507928 scopus 로고    scopus 로고
    • Transposable elements re-wire and fine-tune the transcriptome
    • Cowley M., Oakey R.J. Transposable elements re-wire and fine-tune the transcriptome. PLoS Genet 2013, 9:e1003234.
    • (2013) PLoS Genet , vol.9 , pp. e1003234
    • Cowley, M.1    Oakey, R.J.2
  • 45
    • 0002434883 scopus 로고
    • The phenomenon of position effect
    • Lewis E.B. The phenomenon of position effect. Adv Genet 1950, 3:73-115.
    • (1950) Adv Genet , vol.3 , pp. 73-115
    • Lewis, E.B.1
  • 47
    • 0037418193 scopus 로고    scopus 로고
    • Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission
    • Rakyan V.K., Chong S., Champ M.E., Cuthbert P.C., Morgan H.D., Luu K.V., Whitelaw E. Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission. Proc Natl Acad Sci U S A 2003, 100:2538-2543.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 2538-2543
    • Rakyan, V.K.1    Chong, S.2    Champ, M.E.3    Cuthbert, P.C.4    Morgan, H.D.5    Luu, K.V.6    Whitelaw, E.7
  • 49
    • 33646481643 scopus 로고    scopus 로고
    • Dynamic reprogramming of DNA methylation at an epigenetically sensitive allele in mice
    • Blewitt M.E., Vickaryous N.K., Paldi A., Koseki H., Whitelaw E. Dynamic reprogramming of DNA methylation at an epigenetically sensitive allele in mice. PLoS Genet 2006, 2:e49.
    • (2006) PLoS Genet , vol.2 , pp. e49
    • Blewitt, M.E.1    Vickaryous, N.K.2    Paldi, A.3    Koseki, H.4    Whitelaw, E.5
  • 50
    • 0037072661 scopus 로고    scopus 로고
    • Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi
    • Volpe T.A., Kidner C., Hall I.M., Teng G., Grewal S.I., Martienssen R.A. Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 2002, 297:1833-1837.
    • (2002) Science , vol.297 , pp. 1833-1837
    • Volpe, T.A.1    Kidner, C.2    Hall, I.M.3    Teng, G.4    Grewal, S.I.5    Martienssen, R.A.6
  • 51
    • 84926205298 scopus 로고    scopus 로고
    • RNA-mediated epigenetic regulation of gene expression
    • Holoch D., Moazed D. RNA-mediated epigenetic regulation of gene expression. Nat Rev Genet 2015, 16:71-84.
    • (2015) Nat Rev Genet , vol.16 , pp. 71-84
    • Holoch, D.1    Moazed, D.2
  • 52
    • 10644221797 scopus 로고    scopus 로고
    • RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing
    • Noma K., Sugiyama T., Cam H., Verdel A., Zofall M., Jia S., Moazed D., Grewal S.I. RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing. Nat Genet 2004, 36:1174-1180.
    • (2004) Nat Genet , vol.36 , pp. 1174-1180
    • Noma, K.1    Sugiyama, T.2    Cam, H.3    Verdel, A.4    Zofall, M.5    Jia, S.6    Moazed, D.7    Grewal, S.I.8
  • 53
  • 54
    • 10944248935 scopus 로고    scopus 로고
    • Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs
    • Motamedi M.R., Verdel A., Colmenares S.U., Gerber S.A., Gygi S.P., Moazed D. Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs. Cell 2004, 119:789-802.
    • (2004) Cell , vol.119 , pp. 789-802
    • Motamedi, M.R.1    Verdel, A.2    Colmenares, S.U.3    Gerber, S.A.4    Gygi, S.P.5    Moazed, D.6
  • 55
    • 78449246729 scopus 로고    scopus 로고
    • Continuous requirement for the Clr4 complex but not RNAi for centromeric heterochromatin assembly in fission yeast harboring a disrupted RITS complex
    • Shanker S., Job G., George O.L., Creamer K.M., Shaban A., Partridge J.F. Continuous requirement for the Clr4 complex but not RNAi for centromeric heterochromatin assembly in fission yeast harboring a disrupted RITS complex. PLoS Genet 2010, 6:e1001174.
    • (2010) PLoS Genet , vol.6 , pp. e1001174
    • Shanker, S.1    Job, G.2    George, O.L.3    Creamer, K.M.4    Shaban, A.5    Partridge, J.F.6
  • 56
    • 84936774364 scopus 로고    scopus 로고
    • Epigenetic regulation of chromatin states in Schizosaccharomyces pombe
    • Allshire R.C., Ekwall K. Epigenetic regulation of chromatin states in Schizosaccharomyces pombe. Cold Spring Harb Perspect Biol 2015, 7.
    • (2015) Cold Spring Harb Perspect Biol , pp. 7
    • Allshire, R.C.1    Ekwall, K.2
  • 58
    • 84928130154 scopus 로고    scopus 로고
    • Epigenetics. Epigenetic inheritance uncoupled from sequence-specific recruitment
    • Ragunathan K., Jih G., Moazed D. Epigenetics. Epigenetic inheritance uncoupled from sequence-specific recruitment. Science 2015, 348:1258699.
    • (2015) Science , vol.348 , pp. 1258699
    • Ragunathan, K.1    Jih, G.2    Moazed, D.3
  • 60
    • 79959632637 scopus 로고    scopus 로고
    • Inheritance of stress-induced, ATF-2-dependent epigenetic change
    • Seong K.H., Li D., Shimizu H., Nakamura R., Ishii S. Inheritance of stress-induced, ATF-2-dependent epigenetic change. Cell 2011, 145:1049-1061.
    • (2011) Cell , vol.145 , pp. 1049-1061
    • Seong, K.H.1    Li, D.2    Shimizu, H.3    Nakamura, R.4    Ishii, S.5
  • 61
    • 0032524877 scopus 로고    scopus 로고
    • The Drosophila Fab-7 chromosomal element conveys epigenetic inheritance during mitosis and meiosis
    • Cavalli G., Paro R. The Drosophila Fab-7 chromosomal element conveys epigenetic inheritance during mitosis and meiosis. Cell 1998, 93:505-518.
    • (1998) Cell , vol.93 , pp. 505-518
    • Cavalli, G.1    Paro, R.2
  • 62
    • 78649832440 scopus 로고    scopus 로고
    • Transgenerational inheritance of glucose intolerance in a mouse model of neonatal overnutrition
    • Pentinat T., Ramon-Krauel M., Cebria J., Diaz R., Jimenez-Chillaron J.C. Transgenerational inheritance of glucose intolerance in a mouse model of neonatal overnutrition. Endocrinology 2010, 151:5617-5623.
    • (2010) Endocrinology , vol.151 , pp. 5617-5623
    • Pentinat, T.1    Ramon-Krauel, M.2    Cebria, J.3    Diaz, R.4    Jimenez-Chillaron, J.C.5
  • 64
    • 20344385787 scopus 로고    scopus 로고
    • Epigenetic transgenerational actions of endocrine disruptors and male fertility
    • Anway M.D., Cupp A.S., Uzumcu M., Skinner M.K. Epigenetic transgenerational actions of endocrine disruptors and male fertility. Science 2005, 308:1466-1469.
    • (2005) Science , vol.308 , pp. 1466-1469
    • Anway, M.D.1    Cupp, A.S.2    Uzumcu, M.3    Skinner, M.K.4
  • 65
    • 84893691607 scopus 로고    scopus 로고
    • Parental olfactory experience influences behavior and neural structure in subsequent generations
    • Dias B.G., Ressler K.J. Parental olfactory experience influences behavior and neural structure in subsequent generations. Nat Neurosci 2014, 17:89-96.
    • (2014) Nat Neurosci , vol.17 , pp. 89-96
    • Dias, B.G.1    Ressler, K.J.2
  • 66
    • 84923164001 scopus 로고    scopus 로고
    • Double-stranded RNA made in C. elegans neurons can enter the germline and cause transgenerational gene silencing
    • Devanapally S., Ravikumar S., Jose A.M. Double-stranded RNA made in C. elegans neurons can enter the germline and cause transgenerational gene silencing. Proc Natl Acad Sci U S A 2015, 112:2133-2138.
    • (2015) Proc Natl Acad Sci U S A , vol.112 , pp. 2133-2138
    • Devanapally, S.1    Ravikumar, S.2    Jose, A.M.3
  • 67
    • 34249302620 scopus 로고    scopus 로고
    • Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells
    • Valadi H., Ekstrom K., Bossios A., Sjostrand M., Lee J.J., Lotvall J.O. Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat Cell Biol 2007, 9:654-659.
    • (2007) Nat Cell Biol , vol.9 , pp. 654-659
    • Valadi, H.1    Ekstrom, K.2    Bossios, A.3    Sjostrand, M.4    Lee, J.J.5    Lotvall, J.O.6
  • 68
    • 84903751435 scopus 로고    scopus 로고
    • Soma-to-germline transmission of RNA in mice xenografted with human tumour cells: possible transport by exosomes
    • Cossetti C., Lugini L., Astrologo L., Saggio I., Fais S., Spadafora C. Soma-to-germline transmission of RNA in mice xenografted with human tumour cells: possible transport by exosomes. PLoS One 2014, 9:e101629.
    • (2014) PLoS One , vol.9 , pp. e101629
    • Cossetti, C.1    Lugini, L.2    Astrologo, L.3    Saggio, I.4    Fais, S.5    Spadafora, C.6
  • 69
    • 84893979511 scopus 로고    scopus 로고
    • Novel transcriptome data analysis implicates circulating microRNAs in epigenetic inheritance in mammals
    • Sharma A. Novel transcriptome data analysis implicates circulating microRNAs in epigenetic inheritance in mammals. Gene 2014, 538:366-372.
    • (2014) Gene , vol.538 , pp. 366-372
    • Sharma, A.1
  • 72
    • 84856239588 scopus 로고    scopus 로고
    • Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint
    • Gu S.G., Pak J., Guang S., Maniar J.M., Kennedy S., Fire A. Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint. Nat Genet 2012, 44:157-164.
    • (2012) Nat Genet , vol.44 , pp. 157-164
    • Gu, S.G.1    Pak, J.2    Guang, S.3    Maniar, J.M.4    Kennedy, S.5    Fire, A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.