메뉴 건너뛰기




Volumn 26, Issue 5, 2016, Pages 624-634

Human MAF1 targets and represses active RNA polymerase III genes by preventing recruitment rather than inducing long-term transcriptional arrest

Author keywords

[No Author keywords available]

Indexed keywords

DNA DIRECTED RNA POLYMERASE III; INSULIN; MAMMALIAN TARGET OF RAPAMYCIN COMPLEX 1; MITOGEN ACTIVATED PROTEIN KINASE 3; PROTEIN KINASE B; SMALL INTERFERING RNA; TRANSCRIPTION FACTOR MAF; TRANSFER RNA; MAF1 PROTEIN, HUMAN; MECHANISTIC TARGET OF RAPAMYCIN COMPLEX 1; MULTIPROTEIN COMPLEX; REPRESSOR PROTEIN; TARGET OF RAPAMYCIN KINASE;

EID: 84964928032     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.201400.115     Document Type: Article
Times cited : (57)

References (63)
  • 1
    • 84871699564 scopus 로고    scopus 로고
    • Promoter-proximal pausing of RNA polymerase II: Emerging roles in metazoans
    • Adelman K, Lis JT. 2012. Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans. Nat Rev Genet 13: 720-731.
    • (2012) Nat Rev Genet , vol.13 , pp. 720-731
    • Adelman, K.1    Lis, J.T.2
  • 4
    • 80052366947 scopus 로고    scopus 로고
    • RNA polymerase III under control: Repression and de-repression
    • Boguta M, Graczyk D. 2011. RNA polymerase III under control: repression and de-repression. Trends Biochem Sci 36: 451-456.
    • (2011) Trends Biochem Sci , vol.36 , pp. 451-456
    • Boguta, M.1    Graczyk, D.2
  • 7
    • 61349155582 scopus 로고    scopus 로고
    • Facilitated recycling protects human RNA polymerase III from repression by Maf1 in vitro
    • Čabart P, Lee J, Willis IM. 2008. Facilitated recycling protects human RNA polymerase III from repression by Maf1 in vitro. J Biol Chem 283: 36108-36117.
    • (2008) J Biol Chem , vol.283 , pp. 36108-36117
    • Čabart, P.1    Lee, J.2    Willis, I.M.3
  • 8
    • 77952988986 scopus 로고    scopus 로고
    • Defining the RNA polymerase III transcriptome: Genome-wide localization of the RNA polymerase III transcription machinery in human cells
    • Canella D, Praz V, Reina JH, Cousin P, Hernandez N. 2010. Defining the RNA polymerase III transcriptome: genome-wide localization of the RNA polymerase III transcription machinery in human cells. Genome Res 20: 710-721.
    • (2010) Genome Res , vol.20 , pp. 710-721
    • Canella, D.1    Praz, V.2    Reina, J.H.3    Cousin, P.4    Hernandez, N.5
  • 10
    • 58149189877 scopus 로고    scopus 로고
    • GtRNAdb: A database of transfer RNA genes detected in genomic sequence
    • Chan PP, Lowe TM. 2009. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37: D93-D97.
    • (2009) Nucleic Acids Res , vol.37 , pp. D93-D97
    • Chan, P.P.1    Lowe, T.M.2
  • 11
    • 84943780746 scopus 로고    scopus 로고
    • A fluorescent bimolecular complementation screen reveals MAF1, RNF7 and SETD3 as PCNA-associated proteins in human cells
    • Cooper SE, Hodimont E, Green CM. 2015. A fluorescent bimolecular complementation screen reveals MAF1, RNF7 and SETD3 as PCNA-associated proteins in human cells. Cell Cycle 14: 2509-2519.
    • (2015) Cell Cycle , vol.14 , pp. 2509-2519
    • Cooper, S.E.1    Hodimont, E.2    Green, C.M.3
  • 12
    • 57849109058 scopus 로고    scopus 로고
    • Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
    • Core L, Waterfall J, Lis J. 2008. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 322: 1845-1848.
    • (2008) Science , vol.322 , pp. 1845-1848
    • Core, L.1    Waterfall, J.2    Lis, J.3
  • 13
    • 84876842759 scopus 로고    scopus 로고
    • Signaling pathways differentially affect RNA polymerase II initiation, pausing, and elongation rate in cells
    • Danko CG, Hah N, Luo X, Martins AL, Core L, Lis JT, Siepel A, Kraus WL. 2013. Signaling pathways differentially affect RNA polymerase II initiation, pausing, and elongation rate in cells. Mol Cell 50: 212-222.
    • (2013) Mol Cell , vol.50 , pp. 212-222
    • Danko, C.G.1    Hah, N.2    Luo, X.3    Martins, A.L.4    Core, L.5    Lis, J.T.6    Siepel, A.7    Kraus, W.L.8
  • 14
    • 14844318502 scopus 로고    scopus 로고
    • Two steps in Maf1-dependent repression of transcription by RNA polymerase III
    • Desai N, Lee J, Upadhya R, Chu Y, Moir RD, Willis IM. 2005. Two steps in Maf1-dependent repression of transcription by RNA polymerase III. J Biol Chem 280: 6455-6462.
    • (2005) J Biol Chem , vol.280 , pp. 6455-6462
    • Desai, N.1    Lee, J.2    Upadhya, R.3    Chu, Y.4    Moir, R.D.5    Willis, I.M.6
  • 18
    • 33747831899 scopus 로고    scopus 로고
    • DamID: Mapping of in vivo protein- genome interactions using tethered DNA adenine methyltransferase
    • Greil F, Moorman C, van Steensel B. 2006. DamID: mapping of in vivo protein- genome interactions using tethered DNA adenine methyltransferase. Methods Enzymol 410: 342-359.
    • (2006) Methods Enzymol , vol.410 , pp. 342-359
    • Greil, F.1    Moorman, C.2    Van Steensel, B.3
  • 19
    • 84930820029 scopus 로고    scopus 로고
    • Whyshould cancer biologists care about tRNAs? TRNA synthesis, mRNA translation and the control of growth
    • Grewal SS. 2015. Whyshould cancer biologists care about tRNAs? tRNA synthesis, mRNA translation and the control of growth. Biochim Biophys Acta 1849: 898-907.
    • (2015) Biochim Biophys Acta , vol.1849 , pp. 898-907
    • Grewal, S.S.1
  • 20
    • 34447098370 scopus 로고    scopus 로고
    • A chromatin landmark and transcription initiation at most promoters in human cells
    • Guenther MG, Levine SS, Boyer LA, Jaenisch R, Young RA. 2007. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 130: 77-88.
    • (2007) Cell , vol.130 , pp. 77-88
    • Guenther, M.G.1    Levine, S.S.2    Boyer, L.A.3    Jaenisch, R.4    Young, R.A.5
  • 23
    • 0242582360 scopus 로고    scopus 로고
    • The human proliferating cell nuclear antigen regulates transcriptional coactivator p300 activity and promotes transcriptional repression
    • Hong R, Chakravarti D. 2003. The human proliferating cell nuclear antigen regulates transcriptional coactivator p300 activity and promotes transcriptional repression. J Biol Chem 278: 44505-44513.
    • (2003) J Biol Chem , vol.278 , pp. 44505-44513
    • Hong, R.1    Chakravarti, D.2
  • 24
    • 33646088737 scopus 로고    scopus 로고
    • Structure and substrate recognition of the Escherichia coli DNA adenine methyltransferase
    • Horton JR, Liebert K, Bekes M, Jeltsch A, Cheng X. 2006. Structure and substrate recognition of the Escherichia coli DNA adenine methyltransferase. J Mol Biol 358: 559-570.
    • (2006) J Mol Biol , vol.358 , pp. 559-570
    • Horton, J.R.1    Liebert, K.2    Bekes, M.3    Jeltsch, A.4    Cheng, X.5
  • 25
    • 34247553679 scopus 로고    scopus 로고
    • Mammalian Maf1 is a negative regulator of transcription by all three nuclear RNA polymerases
    • Johnson SS, Zhang C, Fromm J, Willis IM, Johnson DL. 2007. Mammalian Maf1 is a negative regulator of transcription by all three nuclear RNA polymerases. Mol Cell 26: 367-379.
    • (2007) Mol Cell , vol.26 , pp. 367-379
    • Johnson, S.S.1    Zhang, C.2    Fromm, J.3    Willis, I.M.4    Johnson, D.L.5
  • 27
    • 84895538371 scopus 로고    scopus 로고
    • Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells
    • Kulak NA, Pichler G, Paron I, Nagaraj N, Mann M. 2014. Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells. Nat Methods 11: 319-324.
    • (2014) Nat Methods , vol.11 , pp. 319-324
    • Kulak, N.A.1    Pichler, G.2    Paron, I.3    Nagaraj, N.4    Mann, M.5
  • 28
    • 84877965001 scopus 로고    scopus 로고
    • Regulation of mTORC1 and its impact on gene expression at a glance
    • Laplante M, Sabatini DM. 2013. Regulation of mTORC1 and its impact on gene expression at a glance. J Cell Sci 126: 1713-1719.
    • (2013) J Cell Sci , vol.126 , pp. 1713-1719
    • Laplante, M.1    Sabatini, D.M.2
  • 29
    • 0026565203 scopus 로고
    • Cyclic 2',3'-phosphates and nontemplated nucleotides at the 3' end of spliceosomal U6 small nuclear RNA's
    • Lund E, Dahlberg J. 1992. Cyclic 2',3'-phosphates and nontemplated nucleotides at the 3' end of spliceosomal U6 small nuclear RNA's. Science 255: 327-330.
    • (1992) Science , vol.255 , pp. 327-330
    • Lund, E.1    Dahlberg, J.2
  • 30
    • 79958157454 scopus 로고    scopus 로고
    • Direct targets of the D. Melanogaster DSXF protein and the evolution of sexual development
    • Luo SD, Shi GW, Baker BS. 2011. Direct targets of the D. melanogaster DSXF protein and the evolution of sexual development. Development 138: 2761-2771.
    • (2011) Development , vol.138 , pp. 2761-2771
    • Luo, S.D.1    Shi, G.W.2    Baker, B.S.3
  • 31
    • 84859900304 scopus 로고    scopus 로고
    • Nutrient/TOR-dependent regulation of RNA polymerase III controls tissue and organismal growth in Drosophila
    • Marshall L, Rideout EJ, Grewal SS. 2012. Nutrient/TOR-dependent regulation of RNA polymerase III controls tissue and organismal growth in Drosophila. EMBO J 31: 1916-1930.
    • (2012) EMBO J , vol.31 , pp. 1916-1930
    • Marshall, L.1    Rideout, E.J.2    Grewal, S.S.3
  • 32
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from high-throughput sequencing reads
    • Martin M. 2011. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet.journal 17: 10-12.
    • (2011) EMBnet.journal , vol.17 , pp. 10-12
    • Martin, M.1
  • 33
    • 79958026380 scopus 로고    scopus 로고
    • The Ras-ERK and PI3K-mTOR pathways: Cross-talk and compensation
    • Mendoza MC, Er EE, Blenis J. 2011. The Ras-ERK and PI3K-mTOR pathways: cross-talk and compensation. Trends Biochem Sci 36: 320-328.
    • (2011) Trends Biochem Sci , vol.36 , pp. 320-328
    • Mendoza, M.C.1    Er, E.E.2    Blenis, J.3
  • 35
    • 33749257174 scopus 로고    scopus 로고
    • Protein kinase A regulates RNA polymerase III transcription through the nuclear localization of Maf1
    • Moir RD, Lee J, Haeusler RA, Desai N, Engelke DR, Willis IM. 2006. Protein kinase A regulates RNA polymerase III transcription through the nuclear localization of Maf1. Proc Natl Acad Sci 103: 15044-15049.
    • (2006) Proc Natl Acad Sci , vol.103 , pp. 15044-15049
    • Moir, R.D.1    Lee, J.2    Haeusler, R.A.3    Desai, N.4    Engelke, D.R.5    Willis, I.M.6
  • 36
    • 77951962545 scopus 로고    scopus 로고
    • Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cells
    • Moqtaderi Z, Wang J, Raha D, White RJ, Snyder M, Weng Z, Struhl K. 2010. Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cells. Nat Struct Mol Biol 17: 635-640.
    • (2010) Nat Struct Mol Biol , vol.17 , pp. 635-640
    • Moqtaderi, Z.1    Wang, J.2    Raha, D.3    White, R.J.4    Snyder, M.5    Weng, Z.6    Struhl, K.7
  • 37
    • 34548726200 scopus 로고    scopus 로고
    • Identification of modified residues in RNAs by reverse transcription-based methods
    • Motorin Y, Muller S, Behm-Ansmant I, Branlant C. 2007. Identification of modified residues in RNAs by reverse transcription-based methods. Methods Enzymol 425: 21-53.
    • (2007) Methods Enzymol , vol.425 , pp. 21-53
    • Motorin, Y.1    Muller, S.2    Behm-Ansmant, I.3    Branlant, C.4
  • 38
  • 40
    • 84855829663 scopus 로고    scopus 로고
    • RNA polymerase III transcription control elements: Themes and variations
    • Orioli A, Pascali C, Pagano A, Teichmann M, Dieci G. 2012. RNA polymerase III transcription control elements: themes and variations. Gene 493: 185-194.
    • (2012) Gene , vol.493 , pp. 185-194
    • Orioli, A.1    Pascali, C.2    Pagano, A.3    Teichmann, M.4    Dieci, G.5
  • 43
    • 77956276464 scopus 로고    scopus 로고
    • TRNA biology charges to the front
    • Phizicky EM, Hopper AK. 2010. tRNA biology charges to the front. Genes Dev 24: 1832-1860.
    • (2010) Genes Dev , vol.24 , pp. 1832-1860
    • Phizicky, E.M.1    Hopper, A.K.2
  • 46
    • 54949143524 scopus 로고    scopus 로고
    • Maf1, a new player in the regulation of human RNA polymerase III transcription
    • Reina JH, Azzouz TN, Hernandez N. 2006. Maf1, a new player in the regulation of human RNA polymerase III transcription. PLoS One 1: e134.
    • (2006) PLoS One , vol.1 , pp. e134
    • Reina, J.H.1    Azzouz, T.N.2    Hernandez, N.3
  • 48
    • 84856405632 scopus 로고    scopus 로고
    • Drosophila RNA polymerase III repressor Maf1 controls body size and developmental timing by modulating tRNAi Met synthesis and systemic insulin signaling
    • Rideout EJ, Marshall L, Grewal SS. 2012. Drosophila RNA polymerase III repressor Maf1 controls body size and developmental timing by modulating tRNAi Met synthesis and systemic insulin signaling. Proc Natl Acad Sci 109: 1139-1144.
    • (2012) Proc Natl Acad Sci , vol.109 , pp. 1139-1144
    • Rideout, E.J.1    Marshall, L.2    Grewal, S.S.3
  • 49
    • 33744515555 scopus 로고    scopus 로고
    • Dephosphorylation and genome-wide association of Maf1 with Pol III-transcribed genes during repression
    • Roberts DN, Wilson B, Huff JT, Stewart AJ, Cairns BR. 2006. Dephosphorylation and genome-wide association of Maf1 with Pol III-transcribed genes during repression. Mol Cell 22: 633-644.
    • (2006) Mol Cell , vol.22 , pp. 633-644
    • Roberts, D.N.1    Wilson, B.2    Huff, J.T.3    Stewart, A.J.4    Cairns, B.R.5
  • 50
    • 84879598945 scopus 로고    scopus 로고
    • Covalent small ubiquitin- like modifier (SUMO) modification of Maf1 protein controls RNA polymerase III-dependent transcription repression
    • Rohira AD, Chen C-Y, Allen JR, Johnson DL. 2013. Covalent small ubiquitin- like modifier (SUMO) modification of Maf1 protein controls RNA polymerase III-dependent transcription repression. J Biol Chem 288: 19288-19295.
    • (2013) J Biol Chem , vol.288 , pp. 19288-19295
    • Rohira, A.D.1    Chen, C.-Y.2    Allen, J.R.3    Johnson, D.L.4
  • 51
    • 34248202146 scopus 로고    scopus 로고
    • Human Maf1 negatively regulates RNA polymerase III transcription via the TFIIB family members Brf1 and Brf2
    • Rollins J, Veras I, Cabarcas S, Willis I, Schramm L. 2007. Human Maf1 negatively regulates RNA polymerase III transcription via the TFIIB family members Brf1 and Brf2. Int J Biol Sci 3: 292-302.
    • (2007) Int J Biol Sci , vol.3 , pp. 292-302
    • Rollins, J.1    Veras, I.2    Cabarcas, S.3    Willis, I.4    Schramm, L.5
  • 53
    • 84894523716 scopus 로고    scopus 로고
    • Making new contacts: The mTOR network in metabolism and signalling crosstalk
    • Shimobayashi M, Hall MN. 2014. Making new contacts: the mTOR network in metabolism and signalling crosstalk. Nat Rev Mol Cell Biol 15: 155-162.
    • (2014) Nat Rev Mol Cell Biol , vol.15 , pp. 155-162
    • Shimobayashi, M.1    Hall, M.N.2
  • 54
    • 77952036652 scopus 로고    scopus 로고
    • Requirement of the mTOR kinase for the regulation of Maf1 phosphorylation and control of RNA polymerase III-dependent transcription in cancer cells
    • Shor B, Wu J, Shakey Q, Toral-Barza L, Shi C, Follettie M, Yu K. 2010. Requirement of the mTOR kinase for the regulation of Maf1 phosphorylation and control of RNA polymerase III-dependent transcription in cancer cells. J Biol Chem 285: 15380-15392.
    • (2010) J Biol Chem , vol.285 , pp. 15380-15392
    • Shor, B.1    Wu, J.2    Shakey, Q.3    Toral-Barza, L.4    Shi, C.5    Follettie, M.6    Yu, K.7
  • 57
    • 0035093828 scopus 로고    scopus 로고
    • Chromatin profiling using targeted DNA adenine methyltransferase
    • van Steensel B, Delrow J, Henikoff S. 2001. Chromatin profiling using targeted DNA adenine methyltransferase. Nat Genet 27: 304-308.
    • (2001) Nat Genet , vol.27 , pp. 304-308
    • Van Steensel, B.1    Delrow, J.2    Henikoff, S.3
  • 59
    • 0024818399 scopus 로고
    • Regulation of RNA polymerase III transcription in response to F9 embryonal carcinoma stem cell differentiation
    • White RJ, Stott D, Rigby PW. 1989. Regulation of RNA polymerase III transcription in response to F9 embryonal carcinoma stem cell differentiation. Cell 59: 1081-1092.
    • (1989) Cell , vol.59 , pp. 1081-1092
    • White, R.J.1    Stott, D.2    Rigby, P.W.3
  • 60
    • 77954976083 scopus 로고    scopus 로고
    • DamIP: A novel method to identify DNA binding sites in vivo
    • Xiao R, Roman-Sanchez R, Moore DD. 2010. DamIP: a novel method to identify DNA binding sites in vivo. Nucl Recept Signal 8: e003.
    • (2010) Nucl Recept Signal , vol.8 , pp. e003
    • Xiao, R.1    Roman-Sanchez, R.2    Moore, D.D.3
  • 61
    • 84863062090 scopus 로고    scopus 로고
    • Research resource: The estrogen receptor α cistrome defined by DamIP
    • Xiao R, Sun D, Ayers S, Xi Y, LiW, Baxter JD, Moore DD. 2012. Research resource: the estrogen receptor α cistrome defined by DamIP. Mol Endocrinol 26: 349-357.
    • (2012) Mol Endocrinol , vol.26 , pp. 349-357
    • Xiao, R.1    Sun, D.2    Ayers, S.3    Xi, Y.4    LiW5    Baxter, J.D.6    Moore, D.D.7
  • 62
    • 77953091045 scopus 로고    scopus 로고
    • Structure of the human mTOR complex i and its implications for rapamycin inhibition
    • Yip CK, Murata K, Walz T, Sabatini DM, Kang SA. 2010. Structure of the human mTOR complex I and its implications for rapamycin inhibition. Mol Cell 38: 768-774.
    • (2010) Mol Cell , vol.38 , pp. 768-774
    • Yip, C.K.1    Murata, K.2    Walz, T.3    Sabatini, D.M.4    Kang, S.A.5
  • 63
    • 67349116511 scopus 로고    scopus 로고
    • High levels of tRNA abundance and alteration of tRNA charging by bortezomib in multiple myeloma
    • Zhou Y, Goodenbour JM, Godley LA, Wickrema A, Pan T. 2009. High levels of tRNA abundance and alteration of tRNA charging by bortezomib in multiple myeloma. Biochem Biophys Res Commun 385: 160-164.
    • (2009) Biochem Biophys Res Commun , vol.385 , pp. 160-164
    • Zhou, Y.1    Goodenbour, J.M.2    Godley, L.A.3    Wickrema, A.4    Pan, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.