메뉴 건너뛰기




Volumn 23, Issue 5, 2016, Pages 416-425

Molecular basis of caspase-1 polymerization and its inhibition by a new capping mechanism

Author keywords

[No Author keywords available]

Indexed keywords

INFLAMMASOME; INTERLEUKIN 1BETA CONVERTING ENZYME; CRYOPYRIN; NLRP3 PROTEIN, HUMAN;

EID: 84962120866     PISSN: 15459993     EISSN: 15459985     Source Type: Journal    
DOI: 10.1038/nsmb.3199     Document Type: Article
Times cited : (140)

References (56)
  • 1
    • 84901310586 scopus 로고    scopus 로고
    • Mechanisms and functions of inflammasomes
    • Lamkanfi, M. & Dixit, V.M. Mechanisms and functions of inflammasomes. Cell 157, 1013-1022 (2014).
    • (2014) Cell , vol.157 , pp. 1013-1022
    • Lamkanfi, M.1    Dixit, V.M.2
  • 2
    • 84878237993 scopus 로고    scopus 로고
    • Activation and regulation of the inflammasomes
    • Latz, E., Xiao, T.S. & Stutz, A. Activation and regulation of the inflammasomes. Nat. Rev. Immunol. 13, 397-411 (2013).
    • (2013) Nat. Rev. Immunol. , vol.13 , pp. 397-411
    • Latz, E.1    Xiao, T.S.2    Stutz, A.3
  • 3
  • 4
    • 84862777437 scopus 로고    scopus 로고
    • Helical assembly in the death domain (DD) superfamily
    • Ferrao, R. & Wu, H. Helical assembly in the death domain (DD) superfamily. Curr. Opin. Struct. Biol. 22, 241-247 (2012).
    • (2012) Curr. Opin. Struct. Biol. , vol.22 , pp. 241-247
    • Ferrao, R.1    Wu, H.2
  • 5
    • 84896332642 scopus 로고    scopus 로고
    • Unified polymerization mechanism for the assembly of ASC-dependent inflammasomes
    • Lu, A. et al. Unified polymerization mechanism for the assembly of ASC-dependent inflammasomes. Cell 156, 1193-1206 (2014).
    • (2014) Cell , vol.156 , pp. 1193-1206
    • Lu, A.1
  • 6
    • 84896381627 scopus 로고    scopus 로고
    • Prion-like polymerization underlies signal transduction in antiviral immune defense and inflammasome activation
    • Cai, X. et al. Prion-like polymerization underlies signal transduction in antiviral immune defense and inflammasome activation. Cell 156, 1207-1222 (2014).
    • (2014) Cell , vol.156 , pp. 1207-1222
    • Cai, X.1
  • 7
    • 84944747007 scopus 로고    scopus 로고
    • Cryo-EM structure of the activated NAIP2-NLRC4 inflammasome reveals nucleated polymerization
    • Zhang, L. et al. Cryo-EM structure of the activated NAIP2-NLRC4 inflammasome reveals nucleated polymerization. Science 350, 404-409 (2015).
    • (2015) Science , vol.350 , pp. 404-409
    • Zhang, L.1
  • 8
    • 84944748927 scopus 로고    scopus 로고
    • Structural and biochemical basis for induced self-propagation of NLRC4
    • Hu, Z. et al. Structural and biochemical basis for induced self-propagation of NLRC4. Science 350, 399-404 (2015).
    • (2015) Science , vol.350 , pp. 399-404
    • Hu, Z.1
  • 9
    • 84867861468 scopus 로고    scopus 로고
    • Phosphorylation of NLRC4 is critical for inflammasome activation
    • Qu, Y. et al. Phosphorylation of NLRC4 is critical for inflammasome activation. Nature 490, 539-542 (2012).
    • (2012) Nature , vol.490 , pp. 539-542
    • Qu, Y.1
  • 10
    • 80053379974 scopus 로고    scopus 로고
    • Innate immune recognition of bacterial ligands by NAIPs determines inflammasome specificity
    • Kofoed, E.M. & Vance, R.E. Innate immune recognition of bacterial ligands by NAIPs determines inflammasome specificity. Nature 477, 592-595 (2011).
    • (2011) Nature , vol.477 , pp. 592-595
    • Kofoed, E.M.1    Vance, R.E.2
  • 11
    • 79955681780 scopus 로고    scopus 로고
    • IL-1 receptor/Toll-like receptor signaling in infection, inflammation, stress and neurodegeneration couples hyperexcitability and seizures
    • Vezzani, A., Maroso, M., Balosso, S., Sanchez, M.A. & Bartfai, T. IL-1 receptor/Toll-like receptor signaling in infection, inflammation, stress and neurodegeneration couples hyperexcitability and seizures. Brain Behav. Immun. 25, 1281-1289 (2011).
    • (2011) Brain Behav. Immun. , vol.25 , pp. 1281-1289
    • Vezzani, A.1    Maroso, M.2    Balosso, S.3    Sanchez, M.A.4    Bartfai, T.5
  • 12
    • 0038682430 scopus 로고    scopus 로고
    • The PAAD/PYRIN-only protein POP1/ASC2 is a modulator of ASC-mediated nuclear-factor-kappa B and pro-caspase-1 regulation
    • Stehlik, C. et al. The PAAD/PYRIN-only protein POP1/ASC2 is a modulator of ASC-mediated nuclear-factor-kappa B and pro-caspase-1 regulation. Biochem. J. 373, 101-113 (2003).
    • (2003) Biochem. J. , vol.373 , pp. 101-113
    • Stehlik, C.1
  • 13
    • 33947219338 scopus 로고    scopus 로고
    • Pyrin-only protein 2 modulates NF-kappaB and disrupts ASC:CLR interactions
    • Bedoya, F., Sandler, L.L. & Harton, J.A. Pyrin-only protein 2 modulates NF-kappaB and disrupts ASC:CLR interactions. J. Immunol. 178, 3837-3845 (2007).
    • (2007) J. Immunol. , vol.178 , pp. 3837-3845
    • Bedoya, F.1    Sandler, L.L.2    Harton, J.A.3
  • 14
    • 35548929476 scopus 로고    scopus 로고
    • A Shope Fibroma virus PYRIN-only protein modulates the host immune response
    • Dorfleutner, A. et al. A Shope Fibroma virus PYRIN-only protein modulates the host immune response. Virus Genes 35, 685-694 (2007).
    • (2007) Virus Genes , vol.35 , pp. 685-694
    • Dorfleutner, A.1
  • 15
    • 10644270650 scopus 로고    scopus 로고
    • INCA, a novel human caspase recruitment domain protein that inhibits interleukin-1beta generation
    • Lamkanfi, M. et al. INCA, a novel human caspase recruitment domain protein that inhibits interleukin-1beta generation. J. Biol. Chem. 279, 51729-51738 (2004).
    • (2004) J. Biol. Chem. , vol.279 , pp. 51729-51738
    • Lamkanfi, M.1
  • 17
    • 0034743434 scopus 로고    scopus 로고
    • Regulation of IL-1beta generation by Pseudo-ICE and ICEBERG, two dominant negative caspase recruitment domain proteins
    • Druilhe, A., Srinivasula, S.M., Razmara, M., Ahmad, M. & Alnemri, E.S. Regulation of IL-1beta generation by Pseudo-ICE and ICEBERG, two dominant negative caspase recruitment domain proteins. Cell Death Differ. 8, 649-657 (2001).
    • (2001) Cell Death Differ. , vol.8 , pp. 649-657
    • Druilhe, A.1    Srinivasula, S.M.2    Razmara, M.3    Ahmad, M.4    Alnemri, E.S.5
  • 18
    • 84885964931 scopus 로고    scopus 로고
    • Pyrin-and CARD-only proteins as regulators of NLR functions
    • Le, H.T. & Harton, J.A. Pyrin-and CARD-only proteins as regulators of NLR functions. Front. Immunol. 4, 275 (2013).
    • (2013) Front. Immunol. , vol.4 , pp. 275
    • Le, H.T.1    Harton, J.A.2
  • 19
    • 37749030247 scopus 로고    scopus 로고
    • A phylogenetic and functional overview of inflammatory caspases and caspase-1-related CARD-only proteins
    • Kersse, K., Vanden Berghe, T., Lamkanfi, M. & Vandenabeele, P. A phylogenetic and functional overview of inflammatory caspases and caspase-1-related CARD-only proteins. Biochem. Soc. Trans. 35, 1508-1511 (2007).
    • (2007) Biochem. Soc. Trans. , vol.35 , pp. 1508-1511
    • Kersse, K.1    Vanden Berghe, T.2    Lamkanfi, M.3    Vandenabeele, P.4
  • 20
    • 0035860780 scopus 로고    scopus 로고
    • Cop, a caspase recruitment domain-containing protein and inhibitor of caspase-1 activation processing
    • Lee, S.H., Stehlik, C. & Reed, J.C. Cop, a caspase recruitment domain-containing protein and inhibitor of caspase-1 activation processing. J. Biol. Chem. 276, 34495-34500 (2001).
    • (2001) J. Biol. Chem. , vol.276 , pp. 34495-34500
    • Lee, S.H.1    Stehlik, C.2    Reed, J.C.3
  • 21
    • 46649083006 scopus 로고    scopus 로고
    • Different evolutionary strategies for the origin of caspase-1 inhibitors
    • da Cunha, J.P., Galante, P.A. & de Souza, S.J. Different evolutionary strategies for the origin of caspase-1 inhibitors. J. Mol. Evol. 66, 591-597 (2008).
    • (2008) J. Mol. Evol. , vol.66 , pp. 591-597
    • Da Cunha, J.P.1    Galante, P.A.2    De Souza, S.J.3
  • 22
    • 84906342978 scopus 로고    scopus 로고
    • Molecular imprinting as a signal-activation mechanism of the viral RNA sensor RIG-I
    • Wu, B. et al. Molecular imprinting as a signal-activation mechanism of the viral RNA sensor RIG-I. Mol. Cell 55, 511-523 (2014).
    • (2014) Mol. Cell , vol.55 , pp. 511-523
    • Wu, B.1
  • 23
    • 33845305513 scopus 로고    scopus 로고
    • The iterative helical real space reconstruction method: Surmounting the problems posed by real polymers
    • Egelman, E.H. The iterative helical real space reconstruction method: surmounting the problems posed by real polymers. J. Struct. Biol. 157, 83-94 (2007).
    • (2007) J. Struct. Biol. , vol.157 , pp. 83-94
    • Egelman, E.H.1
  • 24
    • 77953714711 scopus 로고    scopus 로고
    • Helical assembly in the MyD88-IRAK4-IRAK2 complex in TLR/IL-1R signalling
    • Lin, S.C., Lo, Y.C. & Wu, H. Helical assembly in the MyD88-IRAK4-IRAK2 complex in TLR/IL-1R signalling. Nature 465, 885-890 (2010).
    • (2010) Nature , vol.465 , pp. 885-890
    • Lin, S.C.1    Lo, Y.C.2    Wu, H.3
  • 25
    • 33846702221 scopus 로고    scopus 로고
    • Death domain assembly mechanism revealed by crystal structure of the oligomeric PIDDosome core complex
    • Park, H.H. et al. Death domain assembly mechanism revealed by crystal structure of the oligomeric PIDDosome core complex. Cell 128, 533-546 (2007).
    • (2007) Cell , vol.128 , pp. 533-546
    • Park, H.H.1
  • 26
    • 84951838786 scopus 로고    scopus 로고
    • Plasticity in PYD assembly revealed by cryo-EM structure of the PYD filament of AIM2
    • Lu, A. et al. Plasticity in PYD assembly revealed by cryo-EM structure of the PYD filament of AIM2. Cell Discov. 1, 15013 (2015).
    • (2015) Cell Discov. , vol.1 , pp. 15013
    • Lu, A.1
  • 27
    • 84883428060 scopus 로고    scopus 로고
    • Site-specific C-terminal and internal loop labeling of proteins using sortase-mediated reactions
    • Guimaraes, C.P. et al. Site-specific C-terminal and internal loop labeling of proteins using sortase-mediated reactions. Nat. Protoc. 8, 1787-1799 (2013).
    • (2013) Nat. Protoc. , vol.8 , pp. 1787-1799
    • Guimaraes, C.P.1
  • 28
    • 70450250064 scopus 로고    scopus 로고
    • Structure and interdomain dynamics of apoptosis-associated speck-like protein containing a CARD (ASC)
    • de Alba, E. Structure and interdomain dynamics of apoptosis-associated speck-like protein containing a CARD (ASC). J. Biol. Chem. 284, 32932-32941 (2009).
    • (2009) J. Biol. Chem. , vol.284 , pp. 32932-32941
    • De Alba, E.1
  • 29
    • 0029872080 scopus 로고    scopus 로고
    • A versatile plasmid expression vector for the production of biotinylated proteins by site-specific, enzymatic modification in Escherichia coli
    • Tsao, K.L., DeBarbieri, B., Michel, H. & Waugh, D.S. A versatile plasmid expression vector for the production of biotinylated proteins by site-specific, enzymatic modification in Escherichia coli. Gene 169, 59-64 (1996).
    • (1996) Gene , vol.169 , pp. 59-64
    • Tsao, K.L.1    DeBarbieri, B.2    Michel, H.3    Waugh, D.S.4
  • 30
    • 84876221513 scopus 로고    scopus 로고
    • Higher-order assemblies in a new paradigm of signal transduction
    • Wu, H. Higher-order assemblies in a new paradigm of signal transduction. Cell 153, 287-292 (2013).
    • (2013) Cell , vol.153 , pp. 287-292
    • Wu, H.1
  • 31
    • 79961133270 scopus 로고    scopus 로고
    • MAVS forms functional prion-like aggregates to activate and propagate antiviral innate immune response
    • Hou, F. et al. MAVS forms functional prion-like aggregates to activate and propagate antiviral innate immune response. Cell 146, 448-461 (2011).
    • (2011) Cell , vol.146 , pp. 448-461
    • Hou, F.1
  • 32
    • 84884563162 scopus 로고    scopus 로고
    • Structural architecture of the CARMA1/Bcl10/MALT1 signalosome: Nucleation-induced filamentous assembly
    • Qiao, Q. et al. Structural architecture of the CARMA1/Bcl10/MALT1 signalosome: nucleation-induced filamentous assembly. Mol. Cell 51, 766-779 (2013).
    • (2013) Mol. Cell , vol.51 , pp. 766-779
    • Qiao, Q.1
  • 33
    • 84862301337 scopus 로고    scopus 로고
    • Current status of inflammasome blockers as anti-inflammatory drugs
    • López-Castejón, G. & Pelegrín, P. Current status of inflammasome blockers as anti-inflammatory drugs. Expert Opin. Investig. Drugs 21, 995-1007 (2012).
    • (2012) Expert Opin. Investig. Drugs , vol.21 , pp. 995-1007
    • López-Castejón, G.1    Pelegrín, P.2
  • 34
    • 84899817657 scopus 로고    scopus 로고
    • Inflammasomes in respiratory disease: From bench to bedside
    • Brusselle, G.G., Provoost, S., Bracke, K.R., Kuchmiy, A. & Lamkanfi, M. Inflammasomes in respiratory disease: from bench to bedside. Chest 145, 1121-1133 (2014).
    • (2014) Chest , vol.145 , pp. 1121-1133
    • Brusselle, G.G.1    Provoost, S.2    Bracke, K.R.3    Kuchmiy, A.4    Lamkanfi, M.5
  • 35
    • 84918785361 scopus 로고    scopus 로고
    • The complex role of inflammasomes in the pathogenesis of inflammatory bowel diseases: Lessons learned from experimental models
    • Aguilera, M., Darby, T. & Melgar, S. The complex role of inflammasomes in the pathogenesis of inflammatory bowel diseases: lessons learned from experimental models. Cytokine Growth Factor Rev. 25, 715-730 (2014).
    • (2014) Cytokine Growth Factor Rev. , vol.25 , pp. 715-730
    • Aguilera, M.1    Darby, T.2    Melgar, S.3
  • 36
    • 84904543855 scopus 로고    scopus 로고
    • Anti-inflammatory therapies for cardiovascular disease
    • Ridker, P.M. & Lüscher, T.F. Anti-inflammatory therapies for cardiovascular disease. Eur. Heart J. 35, 1782-1791 (2014).
    • (2014) Eur. Heart J. , vol.35 , pp. 1782-1791
    • Ridker, P.M.1    Lüscher, T.F.2
  • 38
    • 84899140315 scopus 로고    scopus 로고
    • Inflammasomes and metabolic disorders: Old genes in modern diseases
    • Robbins, G.R., Wen, H. & Ting, J.P. Inflammasomes and metabolic disorders: old genes in modern diseases. Mol. Cell 54, 297-308 (2014).
    • (2014) Mol. Cell , vol.54 , pp. 297-308
    • Robbins, G.R.1    Wen, H.2    Ting, J.P.3
  • 39
    • 0024421755 scopus 로고
    • Effects of CapZ, an actin capping protein of muscle, on the polymerization of actin
    • Caldwell, J.E., Heiss, S.G., Mermall, V. & Cooper, J.A. Effects of CapZ, an actin capping protein of muscle, on the polymerization of actin. Biochemistry 28, 8506-8514 (1989).
    • (1989) Biochemistry , vol.28 , pp. 8506-8514
    • Caldwell, J.E.1    Heiss, S.G.2    Mermall, V.3    Cooper, J.A.4
  • 40
    • 84878610547 scopus 로고    scopus 로고
    • CapZ and actin capping dynamics increase in myocytes after a bout of exercise and abates in hours after stimulation ends
    • Lin, Y.H., Li, J., Swanson, E.R. & Russell, B. CapZ and actin capping dynamics increase in myocytes after a bout of exercise and abates in hours after stimulation ends. J. Appl. Physiol. (1985) 114, 1603-1609 (2013).
    • (2013) J. Appl. Physiol. (1985) , vol.114 , pp. 1603-1609
    • Lin, Y.H.1    Li, J.2    Swanson, E.R.3    Russell, B.4
  • 41
    • 0029670514 scopus 로고    scopus 로고
    • Purification and properties of a Ca2+-independent barbed-end actin filament capping protein, CapZ, from human polymorphonuclear leukocytes
    • Maun, N.A., Speicher, D.W., DiNubile, M.J. & Southwick, F.S. Purification and properties of a Ca2+-independent barbed-end actin filament capping protein, CapZ, from human polymorphonuclear leukocytes. Biochemistry 35, 3518-3524 (1996).
    • (1996) Biochemistry , vol.35 , pp. 3518-3524
    • Maun, N.A.1    Speicher, D.W.2    DiNubile, M.J.3    Southwick, F.S.4
  • 42
    • 0023427610 scopus 로고
    • Effects of cytochalasin and phalloidin on actin
    • Cooper, J.A. Effects of cytochalasin and phalloidin on actin. J. Cell Biol. 105, 1473-1478 (1987).
    • (1987) J. Cell Biol. , vol.105 , pp. 1473-1478
    • Cooper, J.A.1
  • 43
    • 0035065418 scopus 로고    scopus 로고
    • Effects of cytochalasin D and latrunculin B on mechanical properties of cells
    • Wakatsuki, T., Schwab, B., Thompson, N.C. & Elson, E.L. Effects of cytochalasin D and latrunculin B on mechanical properties of cells. J. Cell Sci. 114, 1025-1036 (2001).
    • (2001) J. Cell Sci. , vol.114 , pp. 1025-1036
    • Wakatsuki, T.1    Schwab, B.2    Thompson, N.C.3    Elson, E.L.4
  • 44
    • 0023010376 scopus 로고
    • Interaction of cytochalasin D with actin filaments in the presence of ADP and ATP
    • Carlier, M.F., Criquet, P., Pantaloni, D. & Korn, E.D. Interaction of cytochalasin D with actin filaments in the presence of ADP and ATP. J. Biol. Chem. 261, 2041-2050 (1986).
    • (1986) J. Biol. Chem. , vol.261 , pp. 2041-2050
    • Carlier, M.F.1    Criquet, P.2    Pantaloni, D.3    Korn, E.D.4
  • 45
    • 58049204808 scopus 로고    scopus 로고
    • SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs
    • Shaikh, T.R. et al. SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs. Nat. Protoc. 3, 1941-1974 (2008).
    • (2008) Nat. Protoc. , vol.3 , pp. 1941-1974
    • Shaikh, T.R.1
  • 46
    • 0038441501 scopus 로고    scopus 로고
    • Accurate determination of local defocus and specimen tilt in electron microscopy
    • Mindell, J.A. & Grigorieff, N. Accurate determination of local defocus and specimen tilt in electron microscopy. J. Struct. Biol. 142, 334-347 (2003).
    • (2003) J. Struct. Biol. , vol.142 , pp. 334-347
    • Mindell, J.A.1    Grigorieff, N.2
  • 47
    • 84866078359 scopus 로고    scopus 로고
    • Prevention of overfitting in cryo-EM structure determination
    • Scheres, S.H. & Chen, S. Prevention of overfitting in cryo-EM structure determination. Nat. Methods 9, 853-854 (2012).
    • (2012) Nat. Methods , vol.9 , pp. 853-854
    • Scheres, S.H.1    Chen, S.2
  • 48
    • 84904815625 scopus 로고    scopus 로고
    • SWISS-MODEL: Modelling protein tertiary and quaternary structure using evolutionary information
    • Biasini, M. et al. SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Res. 42, W252-W258 (2014).
    • (2014) Nucleic Acids Res. , vol.42 , pp. W252-W258
    • Biasini, M.1
  • 50
    • 4444221565 scopus 로고    scopus 로고
    • UCSF Chimera: A visualization system for exploratory research and analysis
    • Pettersen, E.F. et al. UCSF Chimera: a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612 (2004).
    • (2004) J. Comput. Chem. , vol.25 , pp. 1605-1612
    • Pettersen, E.F.1
  • 51
    • 79953737180 scopus 로고    scopus 로고
    • Overview of the CCP4 suite and current developments
    • Winn, M.D. et al. Overview of the CCP4 suite and current developments. Acta Crystallogr. D Biol. Crystallogr. 67, 235-242 (2011).
    • (2011) Acta Crystallogr. D Biol. Crystallogr. , vol.67 , pp. 235-242
    • Winn, M.D.1
  • 52
    • 76449098262 scopus 로고    scopus 로고
    • PHENIX: A comprehensive Python-based system for macromolecular structure solution
    • Adams, P.D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D Biol. Crystallogr. 66, 213-221 (2010).
    • (2010) Acta Crystallogr. D Biol. Crystallogr. , vol.66 , pp. 213-221
    • Adams, P.D.1
  • 53
    • 84926520440 scopus 로고    scopus 로고
    • Atomic-accuracy models from 4.5-A cryo-electron microscopy data with density-guided iterative local refinement
    • DiMaio, F. et al. Atomic-accuracy models from 4.5-A cryo-electron microscopy data with density-guided iterative local refinement. Nat. Methods 12, 361-365 (2015).
    • (2015) Nat. Methods , vol.12 , pp. 361-365
    • DiMaio, F.1
  • 54
    • 84868147321 scopus 로고    scopus 로고
    • Design of Ca2+-independent Staphylococcus aureus sortase A mutants
    • Hirakawa, H., Ishikawa, S. & Nagamune, T. Design of Ca2+-independent Staphylococcus aureus sortase A mutants. Biotechnol. Bioeng. 109, 2955-2961 (2012).
    • (2012) Biotechnol. Bioeng. , vol.109 , pp. 2955-2961
    • Hirakawa, H.1    Ishikawa, S.2    Nagamune, T.3
  • 55
    • 79952303452 scopus 로고    scopus 로고
    • The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo
    • Meerbrey, K.L. et al. The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo. Proc. Natl. Acad. Sci. USA 108, 3665-3670 (2011).
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 3665-3670
    • Meerbrey, K.L.1
  • 56
    • 0028871926 scopus 로고
    • Dali: A network tool for protein structure comparison
    • Holm, L. & Sander, C. Dali: a network tool for protein structure comparison. Trends Biochem. Sci. 20, 478-480 (1995).
    • (1995) Trends Biochem. Sci. , vol.20 , pp. 478-480
    • Holm, L.1    Sander, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.