Reproducibility of Illumina platform deep sequencing errors allows accurate determination of DNA barcodes in cells

BMC Bioinformatics

Volumn 17, Issue 1, 2016, Pages

  Beltman, Joost B ^a,b   Urbanus, Jos ^a   Velds, Arno ^a   van Rooij, Nienke ^a   Rohr, Jan C ^a,c   Naik, Shalin H ^a,d,e   Schumacher, Ton N ^a  

^a NETHERLANDS CANCER INSTITUTE   (Netherlands)

^b LEIDEN UNIVERSITY   (Netherlands)

^c UNIVERSITY OF FREIBURG   (Germany)

^d WALTER AND ELIZA HALL INSTITUTE OF MEDICAL RESEARCH   (Australia)

^e UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

Cellular barcoding; Illumina; Lineage tracing; Next generation sequencing; PCR error; Sequencing error

Indexed keywords

BAR CODES; CELL CULTURE; CELL PROLIFERATION; CELLS; CLONE CELLS; CYTOLOGY; DNA; ERRORS; POLYMERASE CHAIN REACTION;

CELLULAR BARCODING; ILLUMINA; LINEAGE TRACING; NEXT-GENERATION SEQUENCING; SEQUENCING ERRORS;

GENE ENCODING;

DNA;

ANIMAL; CHEMISTRY; CYTOLOGY; DNA BARCODING; DNA SEQUENCE; HIGH THROUGHPUT SEQUENCING; METABOLISM; MOUSE; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; STEM CELL;

ANIMALS; BASE SEQUENCE; DNA; DNA BARCODING, TAXONOMIC; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MICE; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; STEM CELLS;

EID: 84962019811     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/s12859-016-0999-4     Document Type: Article

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