-
1
-
-
0026691637
-
Behavioral effects of A71623, a highly selective CCK-A agonist tetrapeptide
-
Asin K.E., Bednarz L., Nikkel A.L., Gore P.A., Montana W.E., Cullen M.J., Shiosaki K., Craig R., Nadzan A.M. Behavioral effects of A71623, a highly selective CCK-A agonist tetrapeptide. Am. J. Physiol. 1992, 263:R125-R135.
-
(1992)
Am. J. Physiol.
, vol.263
, pp. R125-R135
-
-
Asin, K.E.1
Bednarz, L.2
Nikkel, A.L.3
Gore, P.A.4
Montana, W.E.5
Cullen, M.J.6
Shiosaki, K.7
Craig, R.8
Nadzan, A.M.9
-
2
-
-
55049083176
-
A homozygous mutation in human PRICKLE1 causes an autosomal-recessive progressive myoclonus epilepsy-ataxia syndrome
-
Bassuk A.G., Wallace R.H., Buhr A., Buller A.R., Afawi Z., Shimojo M., Miyata S., Chen S., Gonzalez-Alegre P., Griesbach H.L., et al. A homozygous mutation in human PRICKLE1 causes an autosomal-recessive progressive myoclonus epilepsy-ataxia syndrome. Am. J. Hum. Genet. 2008, 83:572-581.
-
(2008)
Am. J. Hum. Genet.
, vol.83
, pp. 572-581
-
-
Bassuk, A.G.1
Wallace, R.H.2
Buhr, A.3
Buller, A.R.4
Afawi, Z.5
Shimojo, M.6
Miyata, S.7
Chen, S.8
Gonzalez-Alegre, P.9
Griesbach, H.L.10
-
3
-
-
84905049901
-
Trimmomatic: a flexible trimmer for Illumina sequence data
-
Bolger A.M., Lohse M., Usadel B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 2014, 30:2114-2120.
-
(2014)
Bioinformatics
, vol.30
, pp. 2114-2120
-
-
Bolger, A.M.1
Lohse, M.2
Usadel, B.3
-
4
-
-
0029163222
-
SCA1 transgenic mice: a model for neurodegeneration caused by an expanded CAG trinucleotide repeat
-
Burright E.N., Clark H.B., Servadio A., Matilla T., Feddersen R.M., Yunis W.S., Duvick L.A., Zoghbi H.Y., Orr H.T. SCA1 transgenic mice: a model for neurodegeneration caused by an expanded CAG trinucleotide repeat. Cell 1995, 82:937-948.
-
(1995)
Cell
, vol.82
, pp. 937-948
-
-
Burright, E.N.1
Clark, H.B.2
Servadio, A.3
Matilla, T.4
Feddersen, R.M.5
Yunis, W.S.6
Duvick, L.A.7
Zoghbi, H.Y.8
Orr, H.T.9
-
5
-
-
10544246496
-
Alternate drug delivery routes for A-71623, a potent cholecystokinin-A receptor agonist tetrapeptide
-
Cannon J.B., Adjei L.A., Lu M.-Y., Garren K. Alternate drug delivery routes for A-71623, a potent cholecystokinin-A receptor agonist tetrapeptide. J. Drug Target. 1996, 4:69-78.
-
(1996)
J. Drug Target.
, vol.4
, pp. 69-78
-
-
Cannon, J.B.1
Adjei, L.A.2
Lu, M.-Y.3
Garren, K.4
-
7
-
-
0942276360
-
The structure of the AXH domain of spinocerebellar ataxin-1
-
Chen Y.W., Allen M.D., Veprintsev D.B., Löwe J., Bycroft M. The structure of the AXH domain of spinocerebellar ataxin-1. J. Biol. Chem. 2004, 279:3758-3765.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 3758-3765
-
-
Chen, Y.W.1
Allen, M.D.2
Veprintsev, D.B.3
Löwe, J.4
Bycroft, M.5
-
8
-
-
0030864463
-
Purkinje cell expression of a mutant allele of SCA1 in transgenic mice leads to disparate effects on motor behaviors, followed by a progressive cerebellar dysfunction and histological alterations
-
Clark H.B., Burright E.N., Yunis W.S., Larson S., Wilcox C., Hartman B., Matilla A., Zoghbi H.Y., Orr H.T. Purkinje cell expression of a mutant allele of SCA1 in transgenic mice leads to disparate effects on motor behaviors, followed by a progressive cerebellar dysfunction and histological alterations. J. Neurosci. 1997, 17:7385-7395.
-
(1997)
J. Neurosci.
, vol.17
, pp. 7385-7395
-
-
Clark, H.B.1
Burright, E.N.2
Yunis, W.S.3
Larson, S.4
Wilcox, C.5
Hartman, B.6
Matilla, A.7
Zoghbi, H.Y.8
Orr, H.T.9
-
9
-
-
77957360461
-
Partial loss of ataxin-1 function contributes to transcriptional dysregulation in spinocerebellar ataxia type 1 pathogenesis
-
Crespo-Barreto J., Fryer J.D., Shaw C.A., Orr H.T., Zoghbi H.Y. Partial loss of ataxin-1 function contributes to transcriptional dysregulation in spinocerebellar ataxia type 1 pathogenesis. PLoS Genet. 2010, 6:e1001021.
-
(2010)
PLoS Genet.
, vol.6
, pp. e1001021
-
-
Crespo-Barreto, J.1
Fryer, J.D.2
Shaw, C.A.3
Orr, H.T.4
Zoghbi, H.Y.5
-
10
-
-
84930340840
-
Ataxin-2 regulates RGS8 translation in a new BAC-SCA2 transgenic mouse model
-
Dansithong W., Paul S., Figueroa K.P., Rinehart M.D., Wiest S., Pflieger L.T., Scoles D.R., Pulst S.M. Ataxin-2 regulates RGS8 translation in a new BAC-SCA2 transgenic mouse model. PLoS Genet. 2015, 11:e1005182.
-
(2015)
PLoS Genet.
, vol.11
, pp. e1005182
-
-
Dansithong, W.1
Paul, S.2
Figueroa, K.P.3
Rinehart, M.D.4
Wiest, S.5
Pflieger, L.T.6
Scoles, D.R.7
Pulst, S.M.8
-
11
-
-
0142039037
-
The AXH module: an independently folded domain common to ataxin-1 and HBP1
-
de Chiara C., Giannini C., Adinolfi S., de Boer J., Guida S., Ramos A., Jodice C., Kioussis D., Pastore A. The AXH module: an independently folded domain common to ataxin-1 and HBP1. FEBS Lett. 2003, 551:107-112.
-
(2003)
FEBS Lett.
, vol.551
, pp. 107-112
-
-
de Chiara, C.1
Giannini, C.2
Adinolfi, S.3
de Boer, J.4
Guida, S.5
Ramos, A.6
Jodice, C.7
Kioussis, D.8
Pastore, A.9
-
12
-
-
77649185172
-
Phosphorylation of S776 and 14-3-3 binding modulate ataxin-1 interaction with splicing factors
-
de Chiara C., Menon R.P., Strom M., Gibson T.J., Pastore A. Phosphorylation of S776 and 14-3-3 binding modulate ataxin-1 interaction with splicing factors. PLoS ONE 2009, 4:e8372.
-
(2009)
PLoS ONE
, vol.4
, pp. e8372
-
-
de Chiara, C.1
Menon, R.P.2
Strom, M.3
Gibson, T.J.4
Pastore, A.5
-
13
-
-
55449103144
-
Application of a translational profiling approach for the comparative analysis of CNS cell types
-
Doyle J.P., Dougherty J.D., Heiman M., Schmidt E.F., Stevens T.R., Ma G., Bupp S., Shrestha P., Shah R.D., Doughty M.L., et al. Application of a translational profiling approach for the comparative analysis of CNS cell types. Cell 2008, 135:749-762.
-
(2008)
Cell
, vol.135
, pp. 749-762
-
-
Doyle, J.P.1
Dougherty, J.D.2
Heiman, M.3
Schmidt, E.F.4
Stevens, T.R.5
Ma, G.6
Bupp, S.7
Shrestha, P.8
Shah, R.D.9
Doughty, M.L.10
-
14
-
-
84943793236
-
Neuropeptide Y mitigates neuropathology and motor deficits in mouse models of Machado-Joseph disease
-
Duarte-Neves J., Gonçalves N., Cunha-Santos J., Simões A.T., den Dunnen W.F.A., Hirai H., Kügler S., Cavadas C., Pereira de Almeida L. Neuropeptide Y mitigates neuropathology and motor deficits in mouse models of Machado-Joseph disease. Hum. Mol. Genet. 2015, 24:5451-5463.
-
(2015)
Hum. Mol. Genet.
, vol.24
, pp. 5451-5463
-
-
Duarte-Neves, J.1
Gonçalves, N.2
Cunha-Santos, J.3
Simões, A.T.4
den Dunnen, W.F.A.5
Hirai, H.6
Kügler, S.7
Cavadas, C.8
Pereira de Almeida, L.9
-
15
-
-
33644841711
-
Cholecystokinin and gastrin receptors
-
Dufresne M., Seva C., Fourmy D. Cholecystokinin and gastrin receptors. Physiol. Rev. 2006, 86:805-847.
-
(2006)
Physiol. Rev.
, vol.86
, pp. 805-847
-
-
Dufresne, M.1
Seva, C.2
Fourmy, D.3
-
16
-
-
77957007354
-
SCA1-like disease in mice expressing wild-type ataxin-1 with a serine to aspartic acid replacement at residue 776
-
Duvick L., Barnes J., Ebner B., Agrawal S., Andresen M., Lim J., Giesler G.J., Zoghbi H.Y., Orr H.T. SCA1-like disease in mice expressing wild-type ataxin-1 with a serine to aspartic acid replacement at residue 776. Neuron 2010, 67:929-935.
-
(2010)
Neuron
, vol.67
, pp. 929-935
-
-
Duvick, L.1
Barnes, J.2
Ebner, B.3
Agrawal, S.4
Andresen, M.5
Lim, J.6
Giesler, G.J.7
Zoghbi, H.Y.8
Orr, H.T.9
-
17
-
-
0037846441
-
Serine 776 of ataxin-1 is critical for polyglutamine-induced disease in SCA1 transgenic mice
-
Emamian E.S., Kaytor M.D., Duvick L.A., Zu T., Tousey S.K., Zoghbi H.Y., Clark H.B., Orr H.T. Serine 776 of ataxin-1 is critical for polyglutamine-induced disease in SCA1 transgenic mice. Neuron 2003, 38:375-387.
-
(2003)
Neuron
, vol.38
, pp. 375-387
-
-
Emamian, E.S.1
Kaytor, M.D.2
Duvick, L.A.3
Zu, T.4
Tousey, S.K.5
Zoghbi, H.Y.6
Clark, H.B.7
Orr, H.T.8
-
18
-
-
84906661754
-
Mutation of senataxin alters disease-specific transcriptional networks in patients with ataxia with oculomotor apraxia type 2
-
Fogel B.L., Cho E., Wahnich A., Gao F., Becherel O.J., Wang X., Fike F., Chen L., Criscuolo C., De Michele G., et al. Mutation of senataxin alters disease-specific transcriptional networks in patients with ataxia with oculomotor apraxia type 2. Hum. Mol. Genet. 2014, 23:4758-4769.
-
(2014)
Hum. Mol. Genet.
, vol.23
, pp. 4758-4769
-
-
Fogel, B.L.1
Cho, E.2
Wahnich, A.3
Gao, F.4
Becherel, O.J.5
Wang, X.6
Fike, F.7
Chen, L.8
Criscuolo, C.9
De Michele, G.10
-
19
-
-
80555125089
-
Exercise and genetic rescue of SCA1 via the transcriptional repressor Capicua
-
Fryer J.D., Yu P., Kang H., Mandel-Brehm C., Carter A.N., Crespo-Barreto J., Gao Y., Flora A., Shaw C., Orr H.T., Zoghbi H.Y. Exercise and genetic rescue of SCA1 via the transcriptional repressor Capicua. Science 2011, 334:690-693.
-
(2011)
Science
, vol.334
, pp. 690-693
-
-
Fryer, J.D.1
Yu, P.2
Kang, H.3
Mandel-Brehm, C.4
Carter, A.N.5
Crespo-Barreto, J.6
Gao, Y.7
Flora, A.8
Shaw, C.9
Orr, H.T.10
Zoghbi, H.Y.11
-
20
-
-
79956017557
-
Partial loss of Tip60 slows mid-stage neurodegeneration in a spinocerebellar ataxia type 1 (SCA1) mouse model
-
Gehrking K.M., Andresen J.M., Duvick L., Lough J., Zoghbi H.Y., Orr H.T. Partial loss of Tip60 slows mid-stage neurodegeneration in a spinocerebellar ataxia type 1 (SCA1) mouse model. Hum. Mol. Genet. 2011, 20:2204-2212.
-
(2011)
Hum. Mol. Genet.
, vol.20
, pp. 2204-2212
-
-
Gehrking, K.M.1
Andresen, J.M.2
Duvick, L.3
Lough, J.4
Zoghbi, H.Y.5
Orr, H.T.6
-
21
-
-
85061495776
-
CummeRbund: Analysis, exploration, manipulation
-
R package version 2.8.2.
-
Goff, L., Trapnell, C., and Kelley, D. (2013). CummeRbund: Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data. R package version 2.8.2. http://compbio.mit.edu/cummeRbund/.
-
(2013)
visualization of Cufflinks high-throughput sequencing data
-
-
Goff, L.1
Trapnell, C.2
Kelley, D.3
-
22
-
-
78650466243
-
A tissue-specific atlas of mouse protein phosphorylation and expression
-
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., Beausoleil S.A., Villén J., Haas W., Sowa M.E., Gygi S.P. A tissue-specific atlas of mouse protein phosphorylation and expression. Cell 2010, 143:1174-1189.
-
(2010)
Cell
, vol.143
, pp. 1174-1189
-
-
Huttlin, E.L.1
Jedrychowski, M.P.2
Elias, J.E.3
Goswami, T.4
Rad, R.5
Beausoleil, S.A.6
Villén, J.7
Haas, W.8
Sowa, M.E.9
Gygi, S.P.10
-
23
-
-
79952168998
-
Regional rescue of spinocerebellar ataxia type 1 phenotypes by 14-3-3epsilon haploinsufficiency in mice underscores complex pathogenicity in neurodegeneration
-
Jafar-Nejad P., Ward C.S., Richman R., Orr H.T., Zoghbi H.Y. Regional rescue of spinocerebellar ataxia type 1 phenotypes by 14-3-3epsilon haploinsufficiency in mice underscores complex pathogenicity in neurodegeneration. Proc. Natl. Acad. Sci. USA 2011, 108:2142-2147.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 2142-2147
-
-
Jafar-Nejad, P.1
Ward, C.S.2
Richman, R.3
Orr, H.T.4
Zoghbi, H.Y.5
-
24
-
-
38349104637
-
Stimulation of cholecystokinin-A receptors with GI181771X does not cause weight loss in overweight or obese patients
-
Jordan J., Greenway F.L., Leiter L.A., Li Z., Jacobson P., Murphy K., Hill J., Kler L., Aftring R.P. Stimulation of cholecystokinin-A receptors with GI181771X does not cause weight loss in overweight or obese patients. Clin. Pharmacol. Ther. 2008, 83:281-287.
-
(2008)
Clin. Pharmacol. Ther.
, vol.83
, pp. 281-287
-
-
Jordan, J.1
Greenway, F.L.2
Leiter, L.A.3
Li, Z.4
Jacobson, P.5
Murphy, K.6
Hill, J.7
Kler, L.8
Aftring, R.P.9
-
25
-
-
67649500192
-
Phosphorylation of ATXN1 at Ser776 in the cerebellum
-
Jorgensen N.D., Andresen J.M., Lagalwar S., Armstrong B., Stevens S., Byam C.E., Duvick L.A., Lai S., Jafar-Nejad P., Zoghbi H.Y., et al. Phosphorylation of ATXN1 at Ser776 in the cerebellum. J. Neurochem. 2009, 110:675-686.
-
(2009)
J. Neurochem.
, vol.110
, pp. 675-686
-
-
Jorgensen, N.D.1
Andresen, J.M.2
Lagalwar, S.3
Armstrong, B.4
Stevens, S.5
Byam, C.E.6
Duvick, L.A.7
Lai, S.8
Jafar-Nejad, P.9
Zoghbi, H.Y.10
-
26
-
-
33745283008
-
Fusion between CIC and DUX4 up-regulates PEA3 family genes in Ewing-like sarcomas with t(4;19)(q35;q13) translocation
-
Kawamura-Saito M., Yamazaki Y., Kaneko K., Kawaguchi N., Kanda H., Mukai H., Gotoh T., Motoi T., Fukayama M., Aburatani H., et al. Fusion between CIC and DUX4 up-regulates PEA3 family genes in Ewing-like sarcomas with t(4;19)(q35;q13) translocation. Hum. Mol. Genet. 2006, 15:2125-2137.
-
(2006)
Hum. Mol. Genet.
, vol.15
, pp. 2125-2137
-
-
Kawamura-Saito, M.1
Yamazaki, Y.2
Kaneko, K.3
Kawaguchi, N.4
Kanda, H.5
Mukai, H.6
Gotoh, T.7
Motoi, T.8
Fukayama, M.9
Aburatani, H.10
-
27
-
-
84875324689
-
Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua
-
Kim E., Lu H.-C., Zoghbi H.Y., Song J.-J. Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua. Genes Dev. 2013, 27:590-595.
-
(2013)
Genes Dev.
, vol.27
, pp. 590-595
-
-
Kim, E.1
Lu, H.-C.2
Zoghbi, H.Y.3
Song, J.-J.4
-
28
-
-
84876996918
-
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
-
Kim D., Pertea G., Trapnell C., Pimentel H., Kelley R., Salzberg S.L. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol. 2013, 14:R36.
-
(2013)
Genome Biol.
, vol.14
, pp. R36
-
-
Kim, D.1
Pertea, G.2
Trapnell, C.3
Pimentel, H.4
Kelley, R.5
Salzberg, S.L.6
-
29
-
-
0032475941
-
Ataxin-1 nuclear localization and aggregation: role in polyglutamine-induced disease in SCA1 transgenic mice
-
Klement I.A., Skinner P.J., Kaytor M.D., Yi H., Hersch S.M., Clark H.B., Zoghbi H.Y., Orr H.T. Ataxin-1 nuclear localization and aggregation: role in polyglutamine-induced disease in SCA1 transgenic mice. Cell 1998, 95:41-53.
-
(1998)
Cell
, vol.95
, pp. 41-53
-
-
Klement, I.A.1
Skinner, P.J.2
Kaytor, M.D.3
Yi, H.4
Hersch, S.M.5
Clark, H.B.6
Zoghbi, H.Y.7
Orr, H.T.8
-
30
-
-
79960790152
-
Update on degenerative ataxias
-
Klockgether T. Update on degenerative ataxias. Curr. Opin. Neurol. 2011, 24:339-345.
-
(2011)
Curr. Opin. Neurol.
, vol.24
, pp. 339-345
-
-
Klockgether, T.1
-
31
-
-
17844392364
-
The pathogenesis of spinocerebellar ataxia
-
Koeppen A.H. The pathogenesis of spinocerebellar ataxia. Cerebellum 2005, 4:62-73.
-
(2005)
Cerebellum
, vol.4
, pp. 62-73
-
-
Koeppen, A.H.1
-
32
-
-
33845657872
-
ATAXIN-1 interacts with the repressor Capicua in its native complex to cause SCA1 neuropathology
-
Lam Y.C., Bowman A.B., Jafar-Nejad P., Lim J., Richman R., Fryer J.D., Hyun E.D., Duvick L.A., Orr H.T., Botas J., Zoghbi H.Y. ATAXIN-1 interacts with the repressor Capicua in its native complex to cause SCA1 neuropathology. Cell 2006, 127:1335-1347.
-
(2006)
Cell
, vol.127
, pp. 1335-1347
-
-
Lam, Y.C.1
Bowman, A.B.2
Jafar-Nejad, P.3
Lim, J.4
Richman, R.5
Fryer, J.D.6
Hyun, E.D.7
Duvick, L.A.8
Orr, H.T.9
Botas, J.10
Zoghbi, H.Y.11
-
33
-
-
60549111634
-
WGCNA: an R package for weighted correlation network analysis
-
Langfelder P., Horvath S. WGCNA: an R package for weighted correlation network analysis. BMC Bioinformatics 2008, 9:559.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 559
-
-
Langfelder, P.1
Horvath, S.2
-
34
-
-
84876217807
-
When is hub gene selection better than standard meta-analysis
-
Langfelder P., Mischel P.S., Horvath S. When is hub gene selection better than standard meta-analysis. PLoS ONE 2013, 8:e61505.
-
(2013)
PLoS ONE
, vol.8
, pp. e61505
-
-
Langfelder, P.1
Mischel, P.S.2
Horvath, S.3
-
35
-
-
0032859048
-
Murine prenatal expression of cholecystokinin in neural crest, enteric neurons, and enteroendocrine cells
-
Lay J.M., Gillespie P.J., Samuelson L.C. Murine prenatal expression of cholecystokinin in neural crest, enteric neurons, and enteroendocrine cells. Dev. Dyn. 1999, 216:190-200.
-
(1999)
Dev. Dyn.
, vol.216
, pp. 190-200
-
-
Lay, J.M.1
Gillespie, P.J.2
Samuelson, L.C.3
-
36
-
-
78650047202
-
Cholecystokinin: a multi-functional molecular switch of neuronal circuits
-
Lee S.Y., Soltesz I. Cholecystokinin: a multi-functional molecular switch of neuronal circuits. Dev. Neurobiol. 2011, 71:83-91.
-
(2011)
Dev. Neurobiol.
, vol.71
, pp. 83-91
-
-
Lee, S.Y.1
Soltesz, I.2
-
37
-
-
33846252240
-
Genome-wide atlas of gene expression in the adult mouse brain
-
Lein E.S., Hawrylycz M.J., Ao N., Ayres M., Bensinger A., Bernard A., Boe A.F., Boguski M.S., Brockway K.S., Byrnes E.J., et al. Genome-wide atlas of gene expression in the adult mouse brain. Nature 2007, 445:168-176.
-
(2007)
Nature
, vol.445
, pp. 168-176
-
-
Lein, E.S.1
Hawrylycz, M.J.2
Ao, N.3
Ayres, M.4
Bensinger, A.5
Bernard, A.6
Boe, A.F.7
Boguski, M.S.8
Brockway, K.S.9
Byrnes, E.J.10
-
38
-
-
0034331381
-
Possible role for the FosB/JunD AP-1 transcription factor complex in glutamate-mediated excitotoxicity in cultured cerebellar granule cells
-
Lidwell K., Griffiths R. Possible role for the FosB/JunD AP-1 transcription factor complex in glutamate-mediated excitotoxicity in cultured cerebellar granule cells. J. Neurosci. Res. 2000, 62:427-439.
-
(2000)
J. Neurosci. Res.
, vol.62
, pp. 427-439
-
-
Lidwell, K.1
Griffiths, R.2
-
39
-
-
42049086100
-
Opposing effects of polyglutamine expansion on native protein complexes contribute to SCA1
-
Lim J., Crespo-Barreto J., Jafar-Nejad P., Bowman A.B., Richman R., Hill D.E., Orr H.T., Zoghbi H.Y. Opposing effects of polyglutamine expansion on native protein complexes contribute to SCA1. Nature 2008, 452:713-718.
-
(2008)
Nature
, vol.452
, pp. 713-718
-
-
Lim, J.1
Crespo-Barreto, J.2
Jafar-Nejad, P.3
Bowman, A.B.4
Richman, R.5
Hill, D.E.6
Orr, H.T.7
Zoghbi, H.Y.8
-
40
-
-
0033995175
-
Polyglutamine expansion down-regulates specific neuronal genes before pathologic changes in SCA1
-
Lin X., Antalffy B., Kang D., Orr H.T., Zoghbi H.Y. Polyglutamine expansion down-regulates specific neuronal genes before pathologic changes in SCA1. Nat. Neurosci. 2000, 3:157-163.
-
(2000)
Nat. Neurosci.
, vol.3
, pp. 157-163
-
-
Lin, X.1
Antalffy, B.2
Kang, D.3
Orr, H.T.4
Zoghbi, H.Y.5
-
41
-
-
84877889970
-
Prickle1 is expressed in distinct cell populations of the central nervous system and contributes to neuronal morphogenesis
-
Liu C., Lin C., Whitaker D.T., Bakeri H., Bulgakov O.V., Liu P., Lei J., Dong L., Li T., Swaroop A. Prickle1 is expressed in distinct cell populations of the central nervous system and contributes to neuronal morphogenesis. Hum. Mol. Genet. 2013, 22:2234-2246.
-
(2013)
Hum. Mol. Genet.
, vol.22
, pp. 2234-2246
-
-
Liu, C.1
Lin, C.2
Whitaker, D.T.3
Bakeri, H.4
Bulgakov, O.V.5
Liu, P.6
Lei, J.7
Dong, L.8
Li, T.9
Swaroop, A.10
-
42
-
-
79958117256
-
MEME-ChIP: motif analysis of large DNA datasets
-
Machanick P., Bailey T.L. MEME-ChIP: motif analysis of large DNA datasets. Bioinformatics 2011, 27:1696-1697.
-
(2011)
Bioinformatics
, vol.27
, pp. 1696-1697
-
-
Machanick, P.1
Bailey, T.L.2
-
43
-
-
0032528167
-
Mice lacking ataxin-1 display learning deficits and decreased hippocampal paired-pulse facilitation
-
Matilla A., Roberson E.D., Banfi S., Morales J., Armstrong D.L., Burright E.N., Orr H.T., Sweatt J.D., Zoghbi H.Y., Matzuk M.M. Mice lacking ataxin-1 display learning deficits and decreased hippocampal paired-pulse facilitation. J. Neurosci. 1998, 18:5508-5516.
-
(1998)
J. Neurosci.
, vol.18
, pp. 5508-5516
-
-
Matilla, A.1
Roberson, E.D.2
Banfi, S.3
Morales, J.4
Armstrong, D.L.5
Burright, E.N.6
Orr, H.T.7
Sweatt, J.D.8
Zoghbi, H.Y.9
Matzuk, M.M.10
-
44
-
-
54949113578
-
Functional organization of the transcriptome in human brain
-
Oldham M.C., Konopka G., Iwamoto K., Langfelder P., Kato T., Horvath S., Geschwind D.H. Functional organization of the transcriptome in human brain. Nat. Neurosci. 2008, 11:1271-1282.
-
(2008)
Nat. Neurosci.
, vol.11
, pp. 1271-1282
-
-
Oldham, M.C.1
Konopka, G.2
Iwamoto, K.3
Langfelder, P.4
Kato, T.5
Horvath, S.6
Geschwind, D.H.7
-
45
-
-
0027164698
-
Expansion of an unstable trinucleotide CAG repeat in spinocerebellar ataxia type 1
-
Orr H.T., Chung M.Y., Banfi S., Kwiatkowski T.J., Servadio A., Beaudet A.L., McCall A.E., Duvick L.A., Ranum L.P., Zoghbi H.Y. Expansion of an unstable trinucleotide CAG repeat in spinocerebellar ataxia type 1. Nat. Genet. 1993, 4:221-226.
-
(1993)
Nat. Genet.
, vol.4
, pp. 221-226
-
-
Orr, H.T.1
Chung, M.Y.2
Banfi, S.3
Kwiatkowski, T.J.4
Servadio, A.5
Beaudet, A.L.6
McCall, A.E.7
Duvick, L.A.8
Ranum, L.P.9
Zoghbi, H.Y.10
-
46
-
-
84937520584
-
Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders
-
Parikshak N.N., Gandal M.J., Geschwind D.H. Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders. Nat. Rev. Genet. 2015, 16:441-458.
-
(2015)
Nat. Rev. Genet.
, vol.16
, pp. 441-458
-
-
Parikshak, N.N.1
Gandal, M.J.2
Geschwind, D.H.3
-
47
-
-
84938421758
-
Distinct brain transcriptome profiles in C9orf72-associated and sporadic ALS
-
Prudencio M., Belzil V.V., Batra R., Ross C.A., Gendron T.F., Pregent L.J., Murray M.E., Overstreet K.K., Piazza-Johnston A.E., Desaro P., et al. Distinct brain transcriptome profiles in C9orf72-associated and sporadic ALS. Nat. Neurosci. 2015, 18:1175-1182.
-
(2015)
Nat. Neurosci.
, vol.18
, pp. 1175-1182
-
-
Prudencio, M.1
Belzil, V.V.2
Batra, R.3
Ross, C.A.4
Gendron, T.F.5
Pregent, L.J.6
Murray, M.E.7
Overstreet, K.K.8
Piazza-Johnston, A.E.9
Desaro, P.10
-
48
-
-
79952709611
-
Improving RNA-Seq expression estimates by correcting for fragment bias
-
Roberts A., Trapnell C., Donaghey J., Rinn J.L., Pachter L. Improving RNA-Seq expression estimates by correcting for fragment bias. Genome Biol. 2011, 12:R22.
-
(2011)
Genome Biol.
, vol.12
, pp. R22
-
-
Roberts, A.1
Trapnell, C.2
Donaghey, J.3
Rinn, J.L.4
Pachter, L.5
-
49
-
-
9744276001
-
Identification of candidate Purkinje cell-specific markers by gene expression profiling in wild-type and pcd(3J) mice
-
Rong Y., Wang T., Morgan J.I. Identification of candidate Purkinje cell-specific markers by gene expression profiling in wild-type and pcd(3J) mice. Brain Res. Mol. Brain Res. 2004, 132:128-145.
-
(2004)
Brain Res. Mol. Brain Res.
, vol.132
, pp. 128-145
-
-
Rong, Y.1
Wang, T.2
Morgan, J.I.3
-
50
-
-
84953723019
-
Impaired mTORC1-dependent expression of Homer-3 influences SCA1 pathophysiology
-
Ruegsegger C., Stucki D.M., Steiner S., Angliker N., Radecke J., Keller E., Zuber B., Rüegg M.A., Saxena S. Impaired mTORC1-dependent expression of Homer-3 influences SCA1 pathophysiology. Neuron 2016, 89:129-146.
-
(2016)
Neuron
, vol.89
, pp. 129-146
-
-
Ruegsegger, C.1
Stucki, D.M.2
Steiner, S.3
Angliker, N.4
Radecke, J.5
Keller, E.6
Zuber, B.7
Rüegg, M.A.8
Saxena, S.9
-
51
-
-
77952889769
-
Human ataxias: a genetic dissection of inositol triphosphate receptor (ITPR1)-dependent signaling
-
Schorge S., van de Leemput J., Singleton A., Houlden H., Hardy J. Human ataxias: a genetic dissection of inositol triphosphate receptor (ITPR1)-dependent signaling. Trends Neurosci. 2010, 33:211-219.
-
(2010)
Trends Neurosci.
, vol.33
, pp. 211-219
-
-
Schorge, S.1
van de Leemput, J.2
Singleton, A.3
Houlden, H.4
Hardy, J.5
-
52
-
-
19544374135
-
Gene profiling links SCA1 pathophysiology to glutamate signaling in Purkinje cells of transgenic mice
-
Serra H.G., Byam C.E., Lande J.D., Tousey S.K., Zoghbi H.Y., Orr H.T. Gene profiling links SCA1 pathophysiology to glutamate signaling in Purkinje cells of transgenic mice. Hum. Mol. Genet. 2004, 13:2535-2543.
-
(2004)
Hum. Mol. Genet.
, vol.13
, pp. 2535-2543
-
-
Serra, H.G.1
Byam, C.E.2
Lande, J.D.3
Tousey, S.K.4
Zoghbi, H.Y.5
Orr, H.T.6
-
53
-
-
33750815242
-
RORalpha-mediated Purkinje cell development determines disease severity in adult SCA1 mice
-
Serra H.G., Duvick L., Zu T., Carlson K., Stevens S., Jorgensen N., Lysholm A., Burright E., Zoghbi H.Y., Clark H.B., et al. RORalpha-mediated Purkinje cell development determines disease severity in adult SCA1 mice. Cell 2006, 127:697-708.
-
(2006)
Cell
, vol.127
, pp. 697-708
-
-
Serra, H.G.1
Duvick, L.2
Zu, T.3
Carlson, K.4
Stevens, S.5
Jorgensen, N.6
Lysholm, A.7
Burright, E.8
Zoghbi, H.Y.9
Clark, H.B.10
-
54
-
-
0242490780
-
Cytoscape: a software environment for integrated models of biomolecular interaction networks
-
Shannon P., Markiel A., Ozier O., Baliga N.S., Wang J.T., Ramage D., Amin N., Schwikowski B., Ideker T. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 2003, 13:2498-2504.
-
(2003)
Genome Res.
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
55
-
-
84880769695
-
Shaping the nervous system: role of the core planar cell polarity genes
-
Tissir F., Goffinet A.M. Shaping the nervous system: role of the core planar cell polarity genes. Nat. Rev. Neurosci. 2013, 14:525-535.
-
(2013)
Nat. Rev. Neurosci.
, vol.14
, pp. 525-535
-
-
Tissir, F.1
Goffinet, A.M.2
-
56
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
Trapnell C., Williams B.A., Pertea G., Mortazavi A., Kwan G., van Baren M.J., Salzberg S.L., Wold B.J., Pachter L. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat. Biotechnol. 2010, 28:511-515.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 511-515
-
-
Trapnell, C.1
Williams, B.A.2
Pertea, G.3
Mortazavi, A.4
Kwan, G.5
van Baren, M.J.6
Salzberg, S.L.7
Wold, B.J.8
Pachter, L.9
-
57
-
-
84859885816
-
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
-
Trapnell C., Roberts A., Goff L., Pertea G., Kim D., Kelley D.R., Pimentel H., Salzberg S.L., Rinn J.L., Pachter L. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat. Protoc. 2012, 7:562-578.
-
(2012)
Nat. Protoc.
, vol.7
, pp. 562-578
-
-
Trapnell, C.1
Roberts, A.2
Goff, L.3
Pertea, G.4
Kim, D.5
Kelley, D.R.6
Pimentel, H.7
Salzberg, S.L.8
Rinn, J.L.9
Pachter, L.10
-
58
-
-
1642447764
-
Ataxin 1, a SCA1 neurodegenerative disorder protein, is functionally linked to the silencing mediator of retinoid and thyroid hormone receptors
-
Tsai C.-C., Kao H.-Y., Mitzutani A., Banayo E., Rajan H., McKeown M., Evans R.M. Ataxin 1, a SCA1 neurodegenerative disorder protein, is functionally linked to the silencing mediator of retinoid and thyroid hormone receptors. Proc. Natl. Acad. Sci. USA 2004, 101:4047-4052.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 4047-4052
-
-
Tsai, C.-C.1
Kao, H.-Y.2
Mitzutani, A.3
Banayo, E.4
Rajan, H.5
McKeown, M.6
Evans, R.M.7
-
59
-
-
23944438950
-
The AXH domain of Ataxin-1 mediates neurodegeneration through its interaction with Gfi-1/Senseless proteins
-
Tsuda H., Jafar-Nejad H., Patel A.J., Sun Y., Chen H.-K., Rose M.F., Venken K.J.T., Botas J., Orr H.T., Bellen H.J., Zoghbi H.Y. The AXH domain of Ataxin-1 mediates neurodegeneration through its interaction with Gfi-1/Senseless proteins. Cell 2005, 122:633-644.
-
(2005)
Cell
, vol.122
, pp. 633-644
-
-
Tsuda, H.1
Jafar-Nejad, H.2
Patel, A.J.3
Sun, Y.4
Chen, H.-K.5
Rose, M.F.6
Venken, K.J.T.7
Botas, J.8
Orr, H.T.9
Bellen, H.J.10
Zoghbi, H.Y.11
-
60
-
-
0025815843
-
Purkinje cell protein-2 regulatory regions and transgene expression in cerebellar compartments
-
Vandaele S., Nordquist D.T., Feddersen R.M., Tretjakoff I., Peterson A.C., Orr H.T. Purkinje cell protein-2 regulatory regions and transgene expression in cerebellar compartments. Genes Dev. 1991, 5:1136-1148.
-
(1991)
Genes Dev.
, vol.5
, pp. 1136-1148
-
-
Vandaele, S.1
Nordquist, D.T.2
Feddersen, R.M.3
Tretjakoff, I.4
Peterson, A.C.5
Orr, H.T.6
-
61
-
-
79955557574
-
Discovery of pyrimidine carboxamides as potent and selective CCK1 receptor agonists
-
Wang L., Hubert J.A., Lee S.J., Pan J., Qian S., Reitman M.L., Strack A.M., Weingarth D.T., MacNeil D.J., Weber A.E., Edmondson S.D. Discovery of pyrimidine carboxamides as potent and selective CCK1 receptor agonists. Bioorg. Med. Chem. Lett. 2011, 21:2911-2915.
-
(2011)
Bioorg. Med. Chem. Lett.
, vol.21
, pp. 2911-2915
-
-
Wang, L.1
Hubert, J.A.2
Lee, S.J.3
Pan, J.4
Qian, S.5
Reitman, M.L.6
Strack, A.M.7
Weingarth, D.T.8
MacNeil, D.J.9
Weber, A.E.10
Edmondson, S.D.11
-
62
-
-
0035168621
-
The spinocerebellar ataxia type 1 protein, ataxin-1, has RNA-binding activity that is inversely affected by the length of its polyglutamine tract
-
Yue S., Serra H.G., Zoghbi H.Y., Orr H.T. The spinocerebellar ataxia type 1 protein, ataxin-1, has RNA-binding activity that is inversely affected by the length of its polyglutamine tract. Hum. Mol. Genet. 2001, 10:25-30.
-
(2001)
Hum. Mol. Genet.
, vol.10
, pp. 25-30
-
-
Yue, S.1
Serra, H.G.2
Zoghbi, H.Y.3
Orr, H.T.4
-
63
-
-
23944458138
-
A general framework for weighted gene co-expression network analysis
-
Zhang B., Horvath S. A general framework for weighted gene co-expression network analysis. Stat. Appl. Genet. Mol. Biol. 2005, 4:e17.
-
(2005)
Stat. Appl. Genet. Mol. Biol.
, vol.4
, pp. e17
-
-
Zhang, B.1
Horvath, S.2
|