-
1
-
-
0024570143
-
Characterization of Candida albicans dihydrofolate reductase
-
Baccanari DP, Tansik RL, Joyner SS, Fling ME, Smith PL, Freisheim JH. Characterization of Candida albicans dihydrofolate reductase. J Biol Chem 1989;264:1100-1107.
-
(1989)
J Biol Chem
, vol.264
, pp. 1100-1107
-
-
Baccanari, D.P.1
Tansik, R.L.2
Joyner, S.S.3
Fling, M.E.4
Smith, P.L.5
Freisheim, J.H.6
-
2
-
-
0023927610
-
Purification and characterization of a ketimine-reducing enzyme
-
Nardini M, Ricci G, Caccuri AM, Solinas SP, Vesci L, Cavallini D. Purification and characterization of a ketimine-reducing enzyme. Eur J Biochem 1988;173:689-694.
-
(1988)
Eur J Biochem
, vol.173
, pp. 689-694
-
-
Nardini, M.1
Ricci, G.2
Caccuri, A.M.3
Solinas, S.P.4
Vesci, L.5
Cavallini, D.6
-
3
-
-
84868550191
-
Two structures of a thiazolinyl imine reductase from Yersinia enterocolitica provide insight into catalysis and binding to the nonribosomal peptide synthetase module of HMWP1
-
Meneely KM, Lamb AL. Two structures of a thiazolinyl imine reductase from Yersinia enterocolitica provide insight into catalysis and binding to the nonribosomal peptide synthetase module of HMWP1. Biochemistry 2012;51:9002-9013.
-
(2012)
Biochemistry
, vol.51
, pp. 9002-9013
-
-
Meneely, K.M.1
Lamb, A.L.2
-
5
-
-
77957679203
-
Asymmetric synthesis of chiral cyclic amine from cyclic imine by bacterial whole-cell catalyst of enantioselective imine reductase
-
Mitsukura K, Suzuki M, Tada K, Yoshida T, Nagasawa T. Asymmetric synthesis of chiral cyclic amine from cyclic imine by bacterial whole-cell catalyst of enantioselective imine reductase. Org Biomol Chem 2010;8:4533-4535
-
(2010)
Org Biomol Chem
, vol.8
, pp. 4533-4535
-
-
Mitsukura, K.1
Suzuki, M.2
Tada, K.3
Yoshida, T.4
Nagasawa, T.5
-
6
-
-
80053150538
-
Purification and characterization of a novel ®-imine reductase from Streptomyces sp. GF3587
-
Mitsukura K, Suzuki M, Shinoda S, Kuramoto T, Yoshida T, Nagasawa T. Purification and characterization of a novel ®-imine reductase from Streptomyces sp. GF3587. Biosci Biotechnol Biochem 2011;75:1778-1782.
-
(2011)
Biosci Biotechnol Biochem
, vol.75
, pp. 1778-1782
-
-
Mitsukura, K.1
Suzuki, M.2
Shinoda, S.3
Kuramoto, T.4
Yoshida, T.5
Nagasawa, T.6
-
7
-
-
84883558751
-
A NADPH-dependent (S)-imine reductase (SIR) from Streptomyces sp. GF3546 for asymmetric synthesis of optically active amines: purification, characterization, gene cloning, and expression
-
Mitsukura K, Kuramoto T, Yoshida T, Kimoto N, Yamamoto H, Nagasawa T. A NADPH-dependent (S)-imine reductase (SIR) from Streptomyces sp. GF3546 for asymmetric synthesis of optically active amines: purification, characterization, gene cloning, and expression. Appl Microbiol Biotechnol 2013;97:8079-8086.
-
(2013)
Appl Microbiol Biotechnol
, vol.97
, pp. 8079-8086
-
-
Mitsukura, K.1
Kuramoto, T.2
Yoshida, T.3
Kimoto, N.4
Yamamoto, H.5
Nagasawa, T.6
-
8
-
-
84889865225
-
Asymmetric reduction of cyclic imines catalyzed by a whole-cell biocatalyst containing an (S)-imine reductase
-
Leipold F, Hussain S, Ghislieri D, Turner NJ. Asymmetric reduction of cyclic imines catalyzed by a whole-cell biocatalyst containing an (S)-imine reductase. ChemCatChem 2013;5:3505-3508.
-
(2013)
ChemCatChem
, vol.5
, pp. 3505-3508
-
-
Leipold, F.1
Hussain, S.2
Ghislieri, D.3
Turner, N.J.4
-
9
-
-
84922643809
-
An ®-imine reductase biocatalyst for the asymmetric reduction of cyclic imines
-
Hussain S, Leipold F, Man H, Wells E, France SP, Mulholland KR, Grogan G, Turner NJ. An ®-imine reductase biocatalyst for the asymmetric reduction of cyclic imines. ChemCatChem 2015;7:579-583.
-
(2015)
ChemCatChem
, vol.7
, pp. 579-583
-
-
Hussain, S.1
Leipold, F.2
Man, H.3
Wells, E.4
France, S.P.5
Mulholland, K.R.6
Grogan, G.7
Turner, N.J.8
-
10
-
-
84963867418
-
-
Nagasawa T, Yoshida T, Ishida K, Yamamoto H, Kimoto N, Daicel Chemical Industries L. Process for production of optically active amine derivative, 2011.
-
(2011)
Daicel Chemical Industries L. Process for production of optically active amine derivative
-
-
Nagasawa, T.1
Yoshida, T.2
Ishida, K.3
Yamamoto, H.4
Kimoto, N.5
-
11
-
-
84880588738
-
Structure and activity of NADPH-dependent reductase Q1EQE0 from Streptomyces kanamyceticus, which catalyses the R-selective reduction of an imine substrate
-
Rodríguez-Mata M, Frank A, Wells E, Leipold F, Turner NJ, Hart S, Turkenburg JP, Grogan G. Structure and activity of NADPH-dependent reductase Q1EQE0 from Streptomyces kanamyceticus, which catalyses the R-selective reduction of an imine substrate. ChemBioChem 2013;14:1372-1379.
-
(2013)
ChemBioChem
, vol.14
, pp. 1372-1379
-
-
Rodríguez-Mata, M.1
Frank, A.2
Wells, E.3
Leipold, F.4
Turner, N.J.5
Hart, S.6
Turkenburg, J.P.7
Grogan, G.8
-
12
-
-
84907808618
-
Enzyme toolbox: novel enantiocomplementary imine reductases
-
Scheller PN, Fademrecht S, Hofelzer S, Pleiss J, Leipold F, Turner NJ, Nestl BM, Hauer B. Enzyme toolbox: novel enantiocomplementary imine reductases. ChemBioChem 2014;15:2201-2204.
-
(2014)
ChemBioChem
, vol.15
, pp. 2201-2204
-
-
Scheller, P.N.1
Fademrecht, S.2
Hofelzer, S.3
Pleiss, J.4
Leipold, F.5
Turner, N.J.6
Nestl, B.M.7
Hauer, B.8
-
13
-
-
84944149519
-
Imine reductase-catalyzed intermolecular reductive amination of aldehydes and ketones
-
Scheller PN, Lenz M, Hammer SC, Hauer B, Nestl BM. Imine reductase-catalyzed intermolecular reductive amination of aldehydes and ketones. ChemCatChem 2015;7:3239-3242.
-
(2015)
ChemCatChem
, vol.7
, pp. 3239-3242
-
-
Scheller, P.N.1
Lenz, M.2
Hammer, S.C.3
Hauer, B.4
Nestl, B.M.5
-
14
-
-
84911894994
-
Characterization of three novel enzymes with imine reductase activity
-
Gand M, Müller H, Wardenga R, Höhne M. Characterization of three novel enzymes with imine reductase activity. J Mol Catal B: Enz 2014;110:126-132.
-
(2014)
J Mol Catal B: Enz
, vol.110
, pp. 126-132
-
-
Gand, M.1
Müller, H.2
Wardenga, R.3
Höhne, M.4
-
15
-
-
84905574413
-
Direct reductive amination of ketones: structure and activity of S -selective imine reductases from streptomyces
-
Huber T, Schneider L, Präg A, Gerhardt S, Einsle O, Müller M. Direct reductive amination of ketones: structure and activity of S -selective imine reductases from streptomyces. ChemCatChem 2014;6:2248-2252.
-
(2014)
ChemCatChem
, vol.6
, pp. 2248-2252
-
-
Huber, T.1
Schneider, L.2
Präg, A.3
Gerhardt, S.4
Einsle, O.5
Müller, M.6
-
16
-
-
84928487130
-
Structure, activity and stereoselectivity of NADPH-dependent oxidoreductases catalysing the S -selective reduction of the imine substrate 2-methylpyrroline
-
Man H, Wells E, Hussain S, Leipold F, Hart S, Turkenburg JP, Turner NJ, Grogan G. Structure, activity and stereoselectivity of NADPH-dependent oxidoreductases catalysing the S -selective reduction of the imine substrate 2-methylpyrroline. ChemBioChem 2015;16:1052-1059.
-
(2015)
ChemBioChem
, vol.16
, pp. 1052-1059
-
-
Man, H.1
Wells, E.2
Hussain, S.3
Leipold, F.4
Hart, S.5
Turkenburg, J.P.6
Turner, N.J.7
Grogan, G.8
-
17
-
-
85027938223
-
Efficient synthesis of chiral indolines using an imine reductase from paenibacillus lactis
-
Li H, Luan Z-J, Zheng G-W, Xu J-H. Efficient synthesis of chiral indolines using an imine reductase from paenibacillus lactis. Adv Syn Catal 2015;357:1692-1696.
-
(2015)
Adv Syn Catal
, vol.357
, pp. 1692-1696
-
-
Li, H.1
Luan, Z.-J.2
Zheng, G.-W.3
Xu, J.-H.4
-
18
-
-
84938743527
-
Expanding the imine reductase toolbox by exploring the bacterial protein-sequence space
-
Wetzl D, Berrera M, Sandon N, Fishlock D, Ebeling M, Müller M, Hanlon S, Wirz B, Iding H. Expanding the imine reductase toolbox by exploring the bacterial protein-sequence space. ChemBioChem 2015;16:1749-1756.
-
(2015)
ChemBioChem
, vol.16
, pp. 1749-1756
-
-
Wetzl, D.1
Berrera, M.2
Sandon, N.3
Fishlock, D.4
Ebeling, M.5
Müller, M.6
Hanlon, S.7
Wirz, B.8
Iding, H.9
-
19
-
-
0033621077
-
Lysine 183 is the general base in the 6-phosphogluconate dehydrogenase-catalyzed reaction
-
Zhang L, Chooback L, Cook PF. Lysine 183 is the general base in the 6-phosphogluconate dehydrogenase-catalyzed reaction. Biochemistry 1999;38:11231-11238.
-
(1999)
Biochemistry
, vol.38
, pp. 11231-11238
-
-
Zhang, L.1
Chooback, L.2
Cook, P.F.3
-
20
-
-
34548139023
-
The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family
-
Fischer M, Knoll M, Sirim D, Wagner F, Funke S, Pleiss J. The Cytochrome P450 Engineering Database: a navigation and prediction tool for the cytochrome P450 protein family. Bioinformatics (Oxford, England) 2007;23:2015-2017.
-
(2007)
Bioinformatics (Oxford, England)
, vol.23
, pp. 2015-2017
-
-
Fischer, M.1
Knoll, M.2
Sirim, D.3
Wagner, F.4
Funke, S.5
Pleiss, J.6
-
21
-
-
64549129098
-
The PHA Depolymerase Engineering Database: a systematic analysis tool for the diverse family of polyhydroxyalkanoate (PHA) depolymerases
-
Knoll M, Hamm TM, Wagner F, Martinez V, Pleiss J. The PHA Depolymerase Engineering Database: a systematic analysis tool for the diverse family of polyhydroxyalkanoate (PHA) depolymerases. BMC Bioinformatics 2009;10:89.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 89
-
-
Knoll, M.1
Hamm, T.M.2
Wagner, F.3
Martinez, V.4
Pleiss, J.5
-
22
-
-
77749336408
-
The Thiamine diphosphate dependent Enzyme Engineering Database: a tool for the systematic analysis of sequence and structure relations
-
Widmann M, Radloff R, Pleiss J. The Thiamine diphosphate dependent Enzyme Engineering Database: a tool for the systematic analysis of sequence and structure relations. BMC Biochemistry 2010; 11:9
-
(2010)
BMC Biochemistry
, vol.11
, pp. 9
-
-
Widmann, M.1
Radloff, R.2
Pleiss, J.3
-
23
-
-
80052342138
-
The Laccase Engineering Database: a classification and analysis system for laccases and related multicopper oxidases
-
bar006.
-
Sirim D, Wagner F, Wang L, Schmid RD, Pleiss J. The Laccase Engineering Database: a classification and analysis system for laccases and related multicopper oxidases. Database: J Biol Databases Curat 2011;2011:bar006
-
(2011)
Database: J Biol Databases Curat
, vol.2011
-
-
Sirim, D.1
Wagner, F.2
Wang, L.3
Schmid, R.D.4
Pleiss, J.5
-
24
-
-
84863784511
-
The triterpene cyclase protein family: a systematic analysis
-
Racolta S, Benjamin Juhl P, Sirim D, Pleiss J. The triterpene cyclase protein family: a systematic analysis. Proteins 2012;80:1-11.
-
(2012)
Proteins
, vol.80
, pp. 1-11
-
-
Racolta, S.1
Benjamin Juhl, P.2
Sirim, D.3
Pleiss, J.4
-
25
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997;25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
26
-
-
58149185141
-
GenBank
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW. GenBank. Nucleic Acids Res 2009; 37:D26-D31.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D26-D31
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Sayers, E.W.5
-
27
-
-
84963791025
-
BioCatNet: a system for the analysis of sequence-structure-function relationships of protein families
-
in press.
-
Vogel C, Reusch W, Pohl M, Rother D, Pleiss J. BioCatNet: a system for the analysis of sequence-structure-function relationships of protein families. Database: J Biol Databases Curat, in press.
-
Database: J Biol Databases Curat
-
-
Vogel, C.1
Reusch, W.2
Pohl, M.3
Rother, D.4
Pleiss, J.5
-
28
-
-
0242490780
-
Cytoscape: a software environment for integrated models of biomolecular interaction networks
-
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 2003;13:2498-2504.
-
(2003)
Genome Res
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
29
-
-
0014757386
-
A general method applicable to the search for similarities in the amino acid sequence of two proteins
-
Needleman SB, Wunsch CD. A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 1970;48:443-453.
-
(1970)
J Mol Biol
, vol.48
, pp. 443-453
-
-
Needleman, S.B.1
Wunsch, C.D.2
-
30
-
-
77954554764
-
An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies
-
Mazin PV, Gelfand MS, Mironov AA, Rakhmaninova AB, Rubinov AR, Russell RB, Kalinina OV. An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies. Algor Mol Biol 2010;5:29
-
(2010)
Algor Mol Biol
, vol.5
, pp. 29
-
-
Mazin, P.V.1
Gelfand, M.S.2
Mironov, A.A.3
Rakhmaninova, A.B.4
Rubinov, A.R.5
Russell, R.B.6
Kalinina, O.V.7
-
31
-
-
0033954256
-
The Protein Data Bank
-
Berman HM. The Protein Data Bank. Nucleic Acids Res 2000;28:235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
-
32
-
-
84899553363
-
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
-
Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 2014;30:1312-1313.
-
(2014)
Bioinformatics
, vol.30
, pp. 1312-1313
-
-
Stamatakis, A.1
-
33
-
-
84868007353
-
Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks
-
Huson DH, Scornavacca C. Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks. Syst Biol 2012;61:1061-1067.
-
(2012)
Syst Biol
, vol.61
, pp. 1061-1067
-
-
Huson, D.H.1
Scornavacca, C.2
-
34
-
-
80054078476
-
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
-
Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R, McWilliam H, Remmert M, Söding J, Thompson JD, Higgins DG . Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol Syst Biol 2011;7:539.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 539
-
-
Sievers, F.1
Wilm, A.2
Dineen, D.3
Gibson, T.J.4
Karplus, K.5
Li, W.6
Lopez, R.7
McWilliam, H.8
Remmert, M.9
Söding, J.10
JD, T.11
DG, H.12
-
35
-
-
84880213068
-
Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions
-
Mistry J, Finn RD, Eddy SR, Bateman A, Punta M. Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions. Nucleic Acids Res 2013;41:e121-e121.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. e121-e121
-
-
Mistry, J.1
Finn, R.D.2
Eddy, S.R.3
Bateman, A.4
Punta, M.5
-
36
-
-
84869078734
-
A standard numbering scheme for thiamine diphosphate-dependent decarboxylases
-
Vogel C, Widmann M, Pohl M, Pleiss J. A standard numbering scheme for thiamine diphosphate-dependent decarboxylases. BMC Biochem 2012;13:24.
-
(2012)
BMC Biochem
, vol.13
, pp. 24
-
-
Vogel, C.1
Widmann, M.2
Pohl, M.3
Pleiss, J.4
-
37
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC. Search and clustering orders of magnitude faster than BLAST. Bioinformatics (Oxford, England) 2010; 26:2460-2461.
-
(2010)
Bioinformatics (Oxford, England)
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
38
-
-
0029845902
-
The nicotinamide dinucleotide binding motif: comparison of nucleotide binding proteins
-
Bellamacina CR. The nicotinamide dinucleotide binding motif: comparison of nucleotide binding proteins. FASEB J 1996;10:1257-1269.
-
(1996)
FASEB J
, vol.10
, pp. 1257-1269
-
-
Bellamacina, C.R.1
-
39
-
-
84905507214
-
Structural characterization of a β-hydroxyacid dehydrogenase from Geobacter sulfurreducens and Geobacter metallireducens with succinic semialdehyde reductase activity
-
Zhang Y, Zheng Y, Qin L, Wang S, Buchko GW, Garavito RM. Structural characterization of a β-hydroxyacid dehydrogenase from Geobacter sulfurreducens and Geobacter metallireducens with succinic semialdehyde reductase activity. Biochimie 2014;104:61-69.
-
(2014)
Biochimie
, vol.104
, pp. 61-69
-
-
Zhang, Y.1
Zheng, Y.2
Qin, L.3
Wang, S.4
Buchko, G.W.5
Garavito, R.M.6
-
40
-
-
0035969876
-
New developments in our understanding of the β-hydroxyacid dehydrogenases
-
Njau RK, Herndon CA, Hawes JW. New developments in our understanding of the β-hydroxyacid dehydrogenases. Chemico-Biol Interact 2001;130-132:785-791.
-
(2001)
Chemico-Biol Interact
, vol.130-132
, pp. 785-791
-
-
Njau, R.K.1
Herndon, C.A.2
Hawes, J.W.3
-
41
-
-
33845664051
-
Crystal structures of a bacterial 6-phosphogluconate dehydrogenase reveal aspects of specificity, mechanism and mode of inhibition by analogues of high-energy reaction intermediates
-
Sundaramoorthy R, Iulek J, Barrett MP, Bidet O, Ruda GF, Gilbert IH, Hunter WN. Crystal structures of a bacterial 6-phosphogluconate dehydrogenase reveal aspects of specificity, mechanism and mode of inhibition by analogues of high-energy reaction intermediates. FEBS J 2007;274:275-286.
-
(2007)
FEBS J
, vol.274
, pp. 275-286
-
-
Sundaramoorthy, R.1
Iulek, J.2
Barrett, M.P.3
Bidet, O.4
Ruda, G.F.5
Gilbert, I.H.6
Hunter, W.N.7
-
42
-
-
78751501376
-
Kinetic and chemical mechanism of the dihydrofolate reductase from Mycobacterium tuberculosis
-
Czekster CM, Vandemeulebroucke A, Blanchard JS. Kinetic and chemical mechanism of the dihydrofolate reductase from Mycobacterium tuberculosis. Biochemistry 2011;50:367-375.
-
(2011)
Biochemistry
, vol.50
, pp. 367-375
-
-
Czekster, C.M.1
Vandemeulebroucke, A.2
Blanchard, J.S.3
-
43
-
-
84863398742
-
Biochemical and structural studies of uncharacterized protein PA0743 from Pseudomonas aeruginosa revealed NAD+-dependent L-serine dehydrogenase
-
Tchigvintsev A, Singer A, Brown G, Flick R, Evdokimova E, Tan K, Gonzalez CF, Savchenko A, Yakunin AF. Biochemical and structural studies of uncharacterized protein PA0743 from Pseudomonas aeruginosa revealed NAD+-dependent L-serine dehydrogenase. J Biol Chem 2012;287:1874-1883.
-
(2012)
J Biol Chem
, vol.287
, pp. 1874-1883
-
-
Tchigvintsev, A.1
Singer, A.2
Brown, G.3
Flick, R.4
Evdokimova, E.5
Tan, K.6
Gonzalez, C.F.7
Savchenko, A.8
Yakunin, A.F.9
|