-
1
-
-
34547897023
-
Histone deacetylases and cancer
-
Glozak, M. A. and Seto, E. (2007) Histone deacetylases and cancer Oncogene 26, 5420-5432 10.1038/sj.onc.1210610
-
(2007)
Oncogene
, vol.26
, pp. 5420-5432
-
-
Glozak, M.A.1
Seto, E.2
-
2
-
-
34547864236
-
Histone deacetylase inhibitors: Molecular mechanisms of action
-
Xu, W. S., Parmigiani, R. B., and Marks, P. A. (2007) Histone deacetylase inhibitors: Molecular mechanisms of action Oncogene 26, 5541-5552 10.1038/sj.onc.1210620
-
(2007)
Oncogene
, vol.26
, pp. 5541-5552
-
-
Xu, W.S.1
Parmigiani, R.B.2
Marks, P.A.3
-
3
-
-
84869869682
-
HDAC inhibitor-based therapies: Can we interpret the code?
-
New, M., Olzscha, H., and La Thangue, N. B. (2012) HDAC inhibitor-based therapies: Can we interpret the code? Mol. Oncol. 6, 637-656 10.1016/j.molonc.2012.09.003
-
(2012)
Mol. Oncol.
, vol.6
, pp. 637-656
-
-
New, M.1
Olzscha, H.2
La Thangue, N.B.3
-
4
-
-
84871650811
-
Metabolic reprogramming by class I and II histone deacetylases
-
Mihaylova, M. M. and Shaw, R. J. (2013) Metabolic reprogramming by class I and II histone deacetylases Trends Endocrinol. Metab. 24, 48-57 10.1016/j.tem.2012.09.003
-
(2013)
Trends Endocrinol. Metab.
, vol.24
, pp. 48-57
-
-
Mihaylova, M.M.1
Shaw, R.J.2
-
5
-
-
78651162036
-
Acetylation and methylation of histones and their possible role in the regulation of RNA synthesis
-
Allfrey, V. G., Faulkner, R., and Mirsky, A. E. (1964) Acetylation and methylation of histones and their possible role in the regulation of RNA synthesis Proc. Natl. Acad. Sci. U. S. A. 51, 786-794 10.1073/pnas.51.5.786
-
(1964)
Proc. Natl. Acad. Sci. U. S. A.
, vol.51
, pp. 786-794
-
-
Allfrey, V.G.1
Faulkner, R.2
Mirsky, A.E.3
-
6
-
-
7044250740
-
Lysine acetylation and the bromodomain: A new partnership for signaling
-
Yang, X. J. (2004) Lysine acetylation and the bromodomain: A new partnership for signaling BioEssays 26, 1076-1087 10.1002/bies.20104
-
(2004)
BioEssays
, vol.26
, pp. 1076-1087
-
-
Yang, X.J.1
-
7
-
-
28044471827
-
Acetylation and deacetylation of non-histone proteins
-
Glozak, M. A., Sengupta, N., Zhang, X., and Seto, E. (2005) Acetylation and deacetylation of non-histone proteins Gene 363, 15-23 10.1016/j.gene.2005.09.010
-
(2005)
Gene
, vol.363
, pp. 15-23
-
-
Glozak, M.A.1
Sengupta, N.2
Zhang, X.3
Seto, E.4
-
8
-
-
33745203038
-
The biochemistry of sirtuins
-
Sauve, A. A., Wolberger, C., Schramm, V. L., and Boeke, J. D. (2006) The biochemistry of sirtuins Annu. Rev. Biochem. 75, 435-465 10.1146/annurev.biochem.74.082803.133500
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 435-465
-
-
Sauve, A.A.1
Wolberger, C.2
Schramm, V.L.3
Boeke, J.D.4
-
9
-
-
1842578986
-
Molecular evolution of the histone deacetylase family: Functional implications of phylogenetic analysis
-
Gregoretti, I. V., Lee, Y. M., and Goodson, H. V. (2004) Molecular evolution of the histone deacetylase family: Functional implications of phylogenetic analysis J. Mol. Biol. 338, 17-31 10.1016/j.jmb.2004.02.006
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 17-31
-
-
Gregoretti, I.V.1
Lee, Y.M.2
Goodson, H.V.3
-
10
-
-
33646548638
-
Catalytic activity and inhibition of human histone deacetylase 8 is dependent on the identity of the active site metal ion
-
Gantt, S. L., Gattis, S. G., and Fierke, C. A. (2006) Catalytic activity and inhibition of human histone deacetylase 8 is dependent on the identity of the active site metal ion Biochemistry 45, 6170-6178 10.1021/bi060212u
-
(2006)
Biochemistry
, vol.45
, pp. 6170-6178
-
-
Gantt, S.L.1
Gattis, S.G.2
Fierke, C.A.3
-
11
-
-
34447509697
-
Vorinostat: A new oral histone deacetylase inhibitor approved for cutaneous T-cell lymphoma
-
Duvic, M. and Vu, J. (2007) Vorinostat: A new oral histone deacetylase inhibitor approved for cutaneous T-cell lymphoma Expert Opin. Invest. Drugs 16, 1111-1120 10.1517/13543784.16.7.1111
-
(2007)
Expert Opin. Invest. Drugs
, vol.16
, pp. 1111-1120
-
-
Duvic, M.1
Vu, J.2
-
12
-
-
33846122993
-
Dimethyl sulfoxide to vorinostat: Development of this histone deacetylase inhibitor as an anticancer drug
-
Marks, P. A. and Breslow, R. (2007) Dimethyl sulfoxide to vorinostat: Development of this histone deacetylase inhibitor as an anticancer drug Nat. Biotechnol. 25, 84-90 10.1038/nbt1272
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 84-90
-
-
Marks, P.A.1
Breslow, R.2
-
13
-
-
36148950997
-
FDA approval summary: Vorinostat for treatment of advanced primary cutaneous T-cell lymphoma
-
Mann, B. S., Johnson, J. R., Cohen, M. H., Justice, R., and Pazdur, R. (2007) FDA approval summary: Vorinostat for treatment of advanced primary cutaneous T-cell lymphoma Oncologist 12, 1247-1252 10.1634/theoncologist.12-10-1247
-
(2007)
Oncologist
, vol.12
, pp. 1247-1252
-
-
Mann, B.S.1
Johnson, J.R.2
Cohen, M.H.3
Justice, R.4
Pazdur, R.5
-
14
-
-
84982252295
-
Clinical development of histone deacetylase inhibitor romidepsin
-
Guan, P. and Fang, H. (2010) Clinical development of histone deacetylase inhibitor romidepsin Drug Discovery Ther. 4, 388-391
-
(2010)
Drug Discovery Ther.
, vol.4
, pp. 388-391
-
-
Guan, P.1
Fang, H.2
-
15
-
-
0036735385
-
FK228 (depsipeptide) as a natural prodrug that inhibits class I histone deacetylases
-
Furumai, R., Matsuyama, A., Kobashi, N., Lee, K.-H., Nishiyama, M., Nakajima, H., Tanaka, A., Komatsu, Y., Nishino, N., Yoshida, M., and Horinouchi, S. (2002) FK228 (depsipeptide) as a natural prodrug that inhibits class I histone deacetylases Cancer Res. 62, 4916-4921
-
(2002)
Cancer Res.
, vol.62
, pp. 4916-4921
-
-
Furumai, R.1
Matsuyama, A.2
Kobashi, N.3
Lee, K.-H.4
Nishiyama, M.5
Nakajima, H.6
Tanaka, A.7
Komatsu, Y.8
Nishino, N.9
Yoshida, M.10
Horinouchi, S.11
-
16
-
-
1642453460
-
Pharmacodynamic response and inhibition of growth of human tumor xenografts by the novel histone deacetylase inhibitor PXD101
-
Plumb, J. A., Finn, P. W., Williams, R. J., Bandara, M. J., Romero, M. R., Watkins, C. J., La Thangue, N. B., and Brown, R. (2003) Pharmacodynamic response and inhibition of growth of human tumor xenografts by the novel histone deacetylase inhibitor PXD101 Mol. Cancer Ther. 2, 721-728
-
(2003)
Mol. Cancer Ther.
, vol.2
, pp. 721-728
-
-
Plumb, J.A.1
Finn, P.W.2
Williams, R.J.3
Bandara, M.J.4
Romero, M.R.5
Watkins, C.J.6
La Thangue, N.B.7
Brown, R.8
-
17
-
-
84939522027
-
FDA approval: Belinostat for the treatment of patients with relapsed or refractory peripheral T-cell lymphoma
-
Lee, H. Z., Kwitkowski, V. E., Del Valle, P. L., Ricci, M. S., Saber, H., Habtemariam, B. A., Bullock, J., Bloomquist, E., Li Shen, Y., Chen, X. H., Brown, J., Mehrotra, N., Dorff, S., Charlab, R., Kane, R. C., Kaminskas, E., Justice, R., Farrell, A. T., and Pazdur, R. (2015) FDA approval: Belinostat for the treatment of patients with relapsed or refractory peripheral T-cell lymphoma Clin. Cancer Res. 21, 2666-2670 10.1158/1078-0432.CCR-14-3119
-
(2015)
Clin. Cancer Res.
, vol.21
, pp. 2666-2670
-
-
Lee, H.Z.1
Kwitkowski, V.E.2
Del Valle, P.L.3
Ricci, M.S.4
Saber, H.5
Habtemariam, B.A.6
Bullock, J.7
Bloomquist, E.8
Li Shen, Y.9
Chen, X.H.10
Brown, J.11
Mehrotra, N.12
Dorff, S.13
Charlab, R.14
Kane, R.C.15
Kaminskas, E.16
Justice, R.17
Farrell, A.T.18
Pazdur, R.19
-
18
-
-
84947205028
-
Panobinostat for the treatment of multiple myeloma
-
Laubach, J. P., Moreau, P., San-Miguel, J. F., and Richardson, P. G. (2015) Panobinostat for the treatment of multiple myeloma Clin. Cancer Res. 21, 4767-4773 10.1158/1078-0432.CCR-15-0530
-
(2015)
Clin. Cancer Res.
, vol.21
, pp. 4767-4773
-
-
Laubach, J.P.1
Moreau, P.2
San-Miguel, J.F.3
Richardson, P.G.4
-
19
-
-
53249130741
-
Therapeutic application of histone deacetylase inhibitors for central nervous system disorders
-
Kazantsev, A. G. and Thompson, L. M. (2008) Therapeutic application of histone deacetylase inhibitors for central nervous system disorders Nat. Rev. Drug Discovery 7, 854-868 10.1038/nrd2681
-
(2008)
Nat. Rev. Drug Discovery
, vol.7
, pp. 854-868
-
-
Kazantsev, A.G.1
Thompson, L.M.2
-
20
-
-
84883788666
-
Epigenetic targeting of histone deacetylase: Therapeutic potential in Parkinson's disease?
-
Harrison, I. F. and Dexter, D. T. (2013) Epigenetic targeting of histone deacetylase: Therapeutic potential in Parkinson's disease? Pharmacol. Ther. 140, 34-52 10.1016/j.pharmthera.2013.05.010
-
(2013)
Pharmacol. Ther.
, vol.140
, pp. 34-52
-
-
Harrison, I.F.1
Dexter, D.T.2
-
21
-
-
6344222799
-
Crystal structure of a eukaryotic zinc-dependent histone deacetylase, human HDAC8, complexed with a hydroxamic acid inhibitor
-
Vannini, A., Volpari, C., Filocamo, G., Casavola, E. C., Brunetti, M., Renzoni, D., Chakravarty, P., Paolini, C., De Francesco, R., Gallinari, P., Steinkuhler, C., and Di Marco, S. (2004) Crystal structure of a eukaryotic zinc-dependent histone deacetylase, human HDAC8, complexed with a hydroxamic acid inhibitor Proc. Natl. Acad. Sci. U. S. A. 101, 15064-15069 10.1073/pnas.0404603101
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 15064-15069
-
-
Vannini, A.1
Volpari, C.2
Filocamo, G.3
Casavola, E.C.4
Brunetti, M.5
Renzoni, D.6
Chakravarty, P.7
Paolini, C.8
De Francesco, R.9
Gallinari, P.10
Steinkuhler, C.11
Di Marco, S.12
-
22
-
-
3142562372
-
Structural snapshots of human HDAC8 provide insights into the class I histone deacetylases
-
Somoza, J. R., Skene, R. J., Katz, B. A., Mol, C., Ho, J. D., Jennings, A. J., Luong, C., Arvai, A., Buggy, J. J., Chi, E., Tang, J., Sang, B. C., Verner, E., Wynands, R., Leahy, E. M., Dougan, D. R., Snell, G., Navre, M., Knuth, M. W., Swanson, R. V., McRee, D. E., and Tari, L. W. (2004) Structural snapshots of human HDAC8 provide insights into the class I histone deacetylases Structure 12, 1325-1334 10.1016/j.str.2004.04.012
-
(2004)
Structure
, vol.12
, pp. 1325-1334
-
-
Somoza, J.R.1
Skene, R.J.2
Katz, B.A.3
Mol, C.4
Ho, J.D.5
Jennings, A.J.6
Luong, C.7
Arvai, A.8
Buggy, J.J.9
Chi, E.10
Tang, J.11
Sang, B.C.12
Verner, E.13
Wynands, R.14
Leahy, E.M.15
Dougan, D.R.16
Snell, G.17
Navre, M.18
Knuth, M.W.19
Swanson, R.V.20
McRee, D.E.21
Tari, L.W.22
more..
-
23
-
-
35548947488
-
Substrate binding to histone deacetylases as shown by the crystal structure of the HDAC8-substrate complex
-
Vannini, A., Volpari, C., Gallinari, P., Jones, P., Mattu, M., Carfí, A., De Francesco, R., Steinkühler, C., and Di Marco, S. (2007) Substrate binding to histone deacetylases as shown by the crystal structure of the HDAC8-substrate complex EMBO Rep. 8, 879-884 10.1038/sj.embor.7401047
-
(2007)
EMBO Rep.
, vol.8
, pp. 879-884
-
-
Vannini, A.1
Volpari, C.2
Gallinari, P.3
Jones, P.4
Mattu, M.5
Carfí, A.6
De Francesco, R.7
Steinkühler, C.8
Di Marco, S.9
-
24
-
-
9744244982
-
Zinc hydrolases: the mechanisms of zinc-dependent deacetylases
-
Hernick, M. and Fierke, C. A. (2005) Zinc hydrolases: The mechanisms of zinc-dependent deacetylases Arch. Biochem. Biophys. 433, 71-84 10.1016/j.abb.2004.08.006
-
(2005)
Arch. Biochem. Biophys.
, vol.433
, pp. 71-84
-
-
Hernick, M.1
Fierke, C.A.2
-
25
-
-
58149144730
-
Structural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors
-
Dowling, D. P., Gantt, S. L., Gattis, S. G., Fierke, C. A., and Christianson, D. W. (2008) Structural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors Biochemistry 47, 13554-13563 10.1021/bi801610c
-
(2008)
Biochemistry
, vol.47
, pp. 13554-13563
-
-
Dowling, D.P.1
Gantt, S.L.2
Gattis, S.G.3
Fierke, C.A.4
Christianson, D.W.5
-
26
-
-
77949908961
-
Activation and inhibition of histone deacetylase 8 by monovalent cations
-
Gantt, S. L., Joseph, C. G., and Fierke, C. A. (2010) Activation and inhibition of histone deacetylase 8 by monovalent cations J. Biol. Chem. 285, 6036-6043 10.1074/jbc.M109.033399
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 6036-6043
-
-
Gantt, S.L.1
Joseph, C.G.2
Fierke, C.A.3
-
27
-
-
77953664293
-
Structures of metal-substituted human histone deacetylase 8 provide mechanistic inferences on biological function
-
Dowling, D. P., Gattis, S. G., Fierke, C. A., and Christianson, D. W. (2010) Structures of metal-substituted human histone deacetylase 8 provide mechanistic inferences on biological function Biochemistry 49, 5048-5056 10.1021/bi1005046
-
(2010)
Biochemistry
, vol.49
, pp. 5048-5056
-
-
Dowling, D.P.1
Gattis, S.G.2
Fierke, C.A.3
Christianson, D.W.4
-
28
-
-
80051599485
-
Structural basis of the antiproliferative activity of largazole, a depsipeptide inhibitor of the histone deacetylases
-
Cole, K. E., Dowling, D. P., Boone, M. A., Phillips, A. J., and Christianson, D. W. (2011) Structural basis of the antiproliferative activity of largazole, a depsipeptide inhibitor of the histone deacetylases J. Am. Chem. Soc. 133, 12474-12477 10.1021/ja205972n
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 12474-12477
-
-
Cole, K.E.1
Dowling, D.P.2
Boone, M.A.3
Phillips, A.J.4
Christianson, D.W.5
-
29
-
-
84912130076
-
Compromised structure and function of HDAC8 mutants identified in Cornelia de Lange Syndrome spectrum disorders
-
Decroos, C., Bowman, C. M., Moser, J.-A. S., Christianson, K. E., Deardorff, M. A., and Christianson, D. W. (2014) Compromised structure and function of HDAC8 mutants identified in Cornelia de Lange Syndrome spectrum disorders ACS Chem. Biol. 9, 2157-2164 10.1021/cb5003762
-
(2014)
ACS Chem. Biol.
, vol.9
, pp. 2157-2164
-
-
Decroos, C.1
Bowman, C.M.2
Moser, J.-A.S.3
Christianson, K.E.4
Deardorff, M.A.5
Christianson, D.W.6
-
30
-
-
84961291691
-
Variable active site loop conformations accommodate the binding of macrocyclic largazole analogues to HDAC8
-
Decroos, C., Clausen, D. J., Haines, B. E., Wiest, O., Williams, R. M., and Christianson, D. W. (2015) Variable active site loop conformations accommodate the binding of macrocyclic largazole analogues to HDAC8 Biochemistry 54, 2126-2135 10.1021/acs.biochem.5b00010
-
(2015)
Biochemistry
, vol.54
, pp. 2126-2135
-
-
Decroos, C.1
Clausen, D.J.2
Haines, B.E.3
Wiest, O.4
Williams, R.M.5
Christianson, D.W.6
-
31
-
-
0033539092
-
Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors
-
Finnin, M. S., Donigian, J. R., Cohen, A., Richon, V. M., Rifkind, R. A., Marks, P. A., Breslow, R., and Pavletich, N. P. (1999) Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors Nature 401, 188-193 10.1038/43710
-
(1999)
Nature
, vol.401
, pp. 188-193
-
-
Finnin, M.S.1
Donigian, J.R.2
Cohen, A.3
Richon, V.M.4
Rifkind, R.A.5
Marks, P.A.6
Breslow, R.7
Pavletich, N.P.8
-
32
-
-
0001548751
-
On the importance of orientation in general base catalysis by carboxylate
-
Gandour, R. D. (1981) On the importance of orientation in general base catalysis by carboxylate Bioorg. Chem. 10, 169-176 10.1016/0045-2068(81)90020-1
-
(1981)
Bioorg. Chem.
, vol.10
, pp. 169-176
-
-
Gandour, R.D.1
-
33
-
-
0023758989
-
Stereoelectronic effects at carboxylate: A syn-oriented model for the histidine-aspartate couple in enzymes
-
Zimmerman, S. C. and Cramer, K. D. (1988) Stereoelectronic effects at carboxylate: A syn-oriented model for the histidine-aspartate couple in enzymes J. Am. Chem. Soc. 110, 5906-5908 10.1021/ja00225a056
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 5906-5908
-
-
Zimmerman, S.C.1
Cramer, K.D.2
-
34
-
-
0024373643
-
Carboxylate-histidine-zinc interactions in protein structure and function
-
Christianson, D. W. and Alexander, R. S. (1989) Carboxylate-histidine-zinc interactions in protein structure and function J. Am. Chem. Soc. 111, 6412-6419 10.1021/ja00198a065
-
(1989)
J. Am. Chem. Soc.
, vol.111
, pp. 6412-6419
-
-
Christianson, D.W.1
Alexander, R.S.2
-
35
-
-
0021740323
-
Conformational differences between various myoglobin ligated states as monitored by proton NMR spectroscopy
-
Bradbury, J. H. and Carver, J. A. (1984) Conformational differences between various myoglobin ligated states as monitored by proton NMR spectroscopy Biochemistry 23, 4905-4913 10.1021/bi00316a013
-
(1984)
Biochemistry
, vol.23
, pp. 4905-4913
-
-
Bradbury, J.H.1
Carver, J.A.2
-
36
-
-
0021759017
-
Assignment of proton NMR resonances of histidine and other aromatic residues in met-, cyano-, oxy-, and (carbon monoxy)myoglobins
-
Carver, J. A. and Bradbury, J. H. (1984) Assignment of proton NMR resonances of histidine and other aromatic residues in met-, cyano-, oxy-, and (carbon monoxy)myoglobins Biochemistry 23, 4890-4905 10.1021/bi00316a012
-
(1984)
Biochemistry
, vol.23
, pp. 4890-4905
-
-
Carver, J.A.1
Bradbury, J.H.2
-
37
-
-
0021892842
-
a values of two histidine residues in human haemoglobin, the Bohr effect, and the dipole moments of α-helices
-
a values of two histidine residues in human haemoglobin, the Bohr effect, and the dipole moments of α-helices J. Mol. Biol. 183, 491-498 10.1016/0022-2836(85)90016-6
-
(1985)
J. Mol. Biol.
, vol.183
, pp. 491-498
-
-
Perutz, M.F.1
Gronenborn, A.M.2
Clore, G.M.3
Fogg, J.H.4
Shih D.T.-b.5
-
38
-
-
27344457467
-
Crystal structure of a bacterial class 2 histone deacetylase homologue
-
Nielsen, T. K., Hildmann, C., Dickmanns, A., Schwienhorst, A., and Ficner, R. (2005) Crystal structure of a bacterial class 2 histone deacetylase homologue J. Mol. Biol. 354, 107-120 10.1016/j.jmb.2005.09.065
-
(2005)
J. Mol. Biol.
, vol.354
, pp. 107-120
-
-
Nielsen, T.K.1
Hildmann, C.2
Dickmanns, A.3
Schwienhorst, A.4
Ficner, R.5
-
39
-
-
40849086606
-
Probing the elusive catalytic activity of vertebrate class IIa histone deacetylases
-
Jones, P., Altamura, S., De Francesco, R., Gallinari, P., Lahm, A., Neddermann, P., Rowley, M., Serafini, S., and Steinkühler, C. (2008) Probing the elusive catalytic activity of vertebrate class IIa histone deacetylases Bioorg. Med. Chem. Lett. 18, 1814-1819 10.1016/j.bmcl.2008.02.025
-
(2008)
Bioorg. Med. Chem. Lett.
, vol.18
, pp. 1814-1819
-
-
Jones, P.1
Altamura, S.2
De Francesco, R.3
Gallinari, P.4
Lahm, A.5
Neddermann, P.6
Rowley, M.7
Serafini, S.8
Steinkühler, C.9
-
40
-
-
45549095066
-
Human HDAC7 harbors a class IIa histone deacetylase-specific zinc binding motif and cryptic deacetylase activity
-
Schuetz, A., Min, J., Allali-Hassani, A., Schapira, M., Shuen, M., Loppnau, P., Mazitschek, R., Kwiatkowski, N. P., Lewis, T. A., Maglathin, R. L., McLean, T. H., Bochkarev, A., Plotnikov, A. N., Vedadi, M., and Arrowsmith, C. H. (2008) Human HDAC7 harbors a class IIa histone deacetylase-specific zinc binding motif and cryptic deacetylase activity J. Biol. Chem. 283, 11355-11363 10.1074/jbc.M707362200
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 11355-11363
-
-
Schuetz, A.1
Min, J.2
Allali-Hassani, A.3
Schapira, M.4
Shuen, M.5
Loppnau, P.6
Mazitschek, R.7
Kwiatkowski, N.P.8
Lewis, T.A.9
Maglathin, R.L.10
McLean, T.H.11
Bochkarev, A.12
Plotnikov, A.N.13
Vedadi, M.14
Arrowsmith, C.H.15
-
41
-
-
33845280830
-
Structural basis of the action of thermolysin and related zinc proteases
-
Matthews, B. W. (1988) Structural basis of the action of thermolysin and related zinc proteases Acc. Chem. Res. 21, 333-340 10.1021/ar00153a003
-
(1988)
Acc. Chem. Res.
, vol.21
, pp. 333-340
-
-
Matthews, B.W.1
-
43
-
-
0032780618
-
Noncomplexing tertiary amines as "better" buffers covering the range of pH 3-11. Temperature dependence of their acid dissociation constants
-
Kandegedara, A. and Rorabacher, D. B. (1999) Noncomplexing tertiary amines as "better" buffers covering the range of pH 3-11. Temperature dependence of their acid dissociation constants Anal. Chem. 71, 3140-3144 10.1021/ac9902594
-
(1999)
Anal. Chem.
, vol.71
, pp. 3140-3144
-
-
Kandegedara, A.1
Rorabacher, D.B.2
-
44
-
-
4644295841
-
Kinetics and comparative reactivity of human class I and class IIb histone deacetylases
-
Schultz, B. E., Misialek, S., Wu, J., Tang, J., Conn, M. T., Tahilramani, R., and Wong, L. (2004) Kinetics and comparative reactivity of human class I and class IIb histone deacetylases Biochemistry 43, 11083-11091 10.1021/bi0494471
-
(2004)
Biochemistry
, vol.43
, pp. 11083-11091
-
-
Schultz, B.E.1
Misialek, S.2
Wu, J.3
Tang, J.4
Conn, M.T.5
Tahilramani, R.6
Wong, L.7
-
45
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z. and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode Methods Enzymol. 276, 307-326 10.1016/S0076-6879(97)76066-X
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
46
-
-
76449098262
-
PHENIX: a comprehensive Python-based system for macromolecular structure solution
-
Adams, P. D., Afonine, P. V., Bunkóczi, G., Chen, V. B., Davis, I. W., Echols, N., Headd, J. J., Hung, L. W., Kapral, G. J., Grosse-Kunstleve, R. W., McCoy, A. J., Moriarty, N. W., Oeffner, R., Read, R. J., Richardson, D. C., Richardson, J. S., Terwilliger, T. C., and Zwart, P. H. (2010) PHENIX: a comprehensive Python-based system for macromolecular structure solution Acta Crystallogr., Sect. D: Biol. Crystallogr. 66, 213-221 10.1107/S0907444909052925
-
(2010)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkóczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
Headd, J.J.7
Hung, L.W.8
Kapral, G.J.9
Grosse-Kunstleve, R.W.10
McCoy, A.J.11
Moriarty, N.W.12
Oeffner, R.13
Read, R.J.14
Richardson, D.C.15
Richardson, J.S.16
Terwilliger, T.C.17
Zwart, P.H.18
-
47
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G., and Cowtan, K. (2010) Features and development of Coot Acta Crystallogr., Sect. D: Biol. Crystallogr. 66, 486-501 10.1107/S0907444910007493
-
(2010)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
48
-
-
0016130797
-
Pyrrole hydrogen ionization of imidazole derivatives in metal ion complexes and carbonic anhydrase
-
Martin, R. B. (1974) Pyrrole hydrogen ionization of imidazole derivatives in metal ion complexes and carbonic anhydrase Proc. Natl. Acad. Sci. U. S. A. 71, 4346-4347 10.1073/pnas.71.11.4346
-
(1974)
Proc. Natl. Acad. Sci. U. S. A.
, vol.71
, pp. 4346-4347
-
-
Martin, R.B.1
-
49
-
-
27944433010
-
Structure and activity of enzymes that remove histone modifications
-
Holbert, M. A. and Marmorstein, R. (2005) Structure and activity of enzymes that remove histone modifications Curr. Opin. Struct. Biol. 15, 673-680 10.1016/j.sbi.2005.10.006
-
(2005)
Curr. Opin. Struct. Biol.
, vol.15
, pp. 673-680
-
-
Holbert, M.A.1
Marmorstein, R.2
-
50
-
-
82955247831
-
Structure, mechanism, and inhibition of histone deacetylases and related metalloenzymes
-
Lombardi, P. M., Cole, K. E., Dowling, D. P., and Christianson, D. W. (2011) Structure, mechanism, and inhibition of histone deacetylases and related metalloenzymes Curr. Opin. Struct. Biol. 21, 735-743 10.1016/j.sbi.2011.08.004
-
(2011)
Curr. Opin. Struct. Biol.
, vol.21
, pp. 735-743
-
-
Lombardi, P.M.1
Cole, K.E.2
Dowling, D.P.3
Christianson, D.W.4
-
51
-
-
5444254467
-
Members of the histone deacetylase superfamily differ in substrate specificity towards small synthetic substrates
-
Riester, D., Wegener, D., Hildmann, C., and Schwienhorst, A. (2004) Members of the histone deacetylase superfamily differ in substrate specificity towards small synthetic substrates Biochem. Biophys. Res. Commun. 324, 1116-1123 10.1016/j.bbrc.2004.09.155
-
(2004)
Biochem. Biophys. Res. Commun.
, vol.324
, pp. 1116-1123
-
-
Riester, D.1
Wegener, D.2
Hildmann, C.3
Schwienhorst, A.4
-
52
-
-
33744514787
-
Substrate and inhibitor specificity of class 1 and class 2 histone deacetylases
-
Hildmann, C., Wegener, D., Riester, D., Hempel, R., Schober, A., Merana, J., Giurato, L., Guccione, S., Nielsen, T. K., Ficner, R., and Schwienhorst, A. (2006) Substrate and inhibitor specificity of class 1 and class 2 histone deacetylases J. Biotechnol. 124, 258-270 10.1016/j.jbiotec.2006.01.030
-
(2006)
J. Biotechnol.
, vol.124
, pp. 258-270
-
-
Hildmann, C.1
Wegener, D.2
Riester, D.3
Hempel, R.4
Schober, A.5
Merana, J.6
Giurato, L.7
Guccione, S.8
Nielsen, T.K.9
Ficner, R.10
Schwienhorst, A.11
-
53
-
-
20444469255
-
UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase functions through a general acid-base catalyst pair mechanism
-
Hernick, M., Gennadios, H. A., Whittington, D. A., Rusche, K. M., Christianson, D. W., and Fierke, C. A. (2005) UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase functions through a general acid-base catalyst pair mechanism J. Biol. Chem. 280, 16969-16978 10.1074/jbc.M413560200
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 16969-16978
-
-
Hernick, M.1
Gennadios, H.A.2
Whittington, D.A.3
Rusche, K.M.4
Christianson, D.W.5
Fierke, C.A.6
-
54
-
-
0038154073
-
Crystal Structure of LpxC, a zinc-dependent deacetylase essential for endotoxin biosynthesis
-
Whittington, D. A., Rusche, K. M., Shin, H., Fierke, C. A., and Christianson, D. W. (2003) Crystal Structure of LpxC, a zinc-dependent deacetylase essential for endotoxin biosynthesis Proc. Natl. Acad. Sci. U. S. A. 100, 8146-8150 10.1073/pnas.1432990100
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 8146-8150
-
-
Whittington, D.A.1
Rusche, K.M.2
Shin, H.3
Fierke, C.A.4
Christianson, D.W.5
-
55
-
-
0028169317
-
Binding to thermolysin of phenolate-containing inhibitors necessitates a revised mechanism of catalysis
-
Mock, W. L. and Aksamawati, M. (1994) Binding to thermolysin of phenolate-containing inhibitors necessitates a revised mechanism of catalysis Biochem. J. 302, 57-68 10.1042/bj3020057
-
(1994)
Biochem. J.
, vol.302
, pp. 57-68
-
-
Mock, W.L.1
Aksamawati, M.2
-
56
-
-
33845410825
-
Catalytic mechanism and molecular recognition of E. coli UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase probed by mutagenesis
-
Hernick, M. and Fierke, C. A. (2006) Catalytic mechanism and molecular recognition of E. coli UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase probed by mutagenesis Biochemistry 45, 15240-15248 10.1021/bi061405k
-
(2006)
Biochemistry
, vol.45
, pp. 15240-15248
-
-
Hernick, M.1
Fierke, C.A.2
-
57
-
-
0031767267
-
Differences in transition state stabilization between thermolysin (EC 3.4.24.27) and neprilysin (EC 3.4.24.11)
-
Marie-Claire, C., Ruffet, E., Tiraboschi, G., and Fournie-Zaluski, M. C. (1998) Differences in transition state stabilization between thermolysin (EC 3.4.24.27) and neprilysin (EC 3.4.24.11) FEBS Lett. 438, 215-219 10.1016/S0014-5793(98)01267-8
-
(1998)
FEBS Lett.
, vol.438
, pp. 215-219
-
-
Marie-Claire, C.1
Ruffet, E.2
Tiraboschi, G.3
Fournie-Zaluski, M.C.4
-
58
-
-
5244245983
-
A correlation of reaction rates
-
Hammond, G. S. (1955) A correlation of reaction rates J. Am. Chem. Soc. 77, 334-338 10.1021/ja01607a027
-
(1955)
J. Am. Chem. Soc.
, vol.77
, pp. 334-338
-
-
Hammond, G.S.1
-
59
-
-
33646021957
-
Unexpected deacetylation mechanism suggested by a density functional theory QM/MM study of histone-deacetylase-like protein
-
Corminboeuf, C., Hu, P., Tuckerman, M. E., and Zhang, Y. (2006) Unexpected deacetylation mechanism suggested by a density functional theory QM/MM study of histone-deacetylase-like protein J. Am. Chem. Soc. 128, 4530-4531 10.1021/ja0600882
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 4530-4531
-
-
Corminboeuf, C.1
Hu, P.2
Tuckerman, M.E.3
Zhang, Y.4
-
60
-
-
77955808765
-
A proton-shuttle reaction mechanism for histone deacetylase 8 and the catalytic role of metal ions
-
Wu, R., Wang, S., Zhou, N., Cao, Z., and Zhang, Y. (2010) A proton-shuttle reaction mechanism for histone deacetylase 8 and the catalytic role of metal ions J. Am. Chem. Soc. 132, 9471-9479 10.1021/ja103932d
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 9471-9479
-
-
Wu, R.1
Wang, S.2
Zhou, N.3
Cao, Z.4
Zhang, Y.5
-
61
-
-
84906330653
-
Inhibition and mechanism of HDAC8 revisited
-
Chen, K., Zhang, X., Wu, Y.-D., and Wiest, O. (2014) Inhibition and mechanism of HDAC8 revisited J. Am. Chem. Soc. 136, 11636-11643 10.1021/ja501548p
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 11636-11643
-
-
Chen, K.1
Zhang, X.2
Wu, Y.-D.3
Wiest, O.4
|