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Volumn 291, Issue 1, 2016, Pages 33-49

Evolution and conservation of JmjC domain proteins in the green lineage

Author keywords

Domain organization; Evolution; Histone lysine demethylases; JmjC domain; Phylogenetic analysis

Indexed keywords

2 OXOGLUTARIC ACID; FERROUS ION; HISTONE DEMETHYLASE; HISTONE LYSINE DEMETHYLASE; JMJC PROTEIN; PROTEIN; UNCLASSIFIED DRUG; ALPHA-KETOGLUTARIC ACID; HISTONE; HISTONE LYSINE METHYLTRANSFERASE; VEGETABLE PROTEIN;

EID: 84956671055     PISSN: 16174615     EISSN: 16174623     Source Type: Journal    
DOI: 10.1007/s00438-015-1089-4     Document Type: Article
Times cited : (31)

References (105)
  • 2
    • 84956646229 scopus 로고    scopus 로고
    • Caractérisation fonctionnelle de JMJ24, une déméthylase d’histone de la famille JUMONJI
    • D), Université Paris Sud
    • Audonnet L (2014) Caractérisation fonctionnelle de JMJ24, une déméthylase d’histone de la famille JUMONJI, chez Arabidopsis thaliana (D). Université Paris Sud
    • (2014) chez Arabidopsis thaliana
    • Audonnet, L.1
  • 3
    • 84905002813 scopus 로고    scopus 로고
    • Epigenetic control of plant senescence and linked processes
    • PID: 24683182
    • Ay N, Janack B, Humbeck K (2014) Epigenetic control of plant senescence and linked processes. J Exp Bot 65(14):3875–3887
    • (2014) J Exp Bot , vol.65 , Issue.14 , pp. 3875-3887
    • Ay, N.1    Janack, B.2    Humbeck, K.3
  • 5
    • 83255192184 scopus 로고    scopus 로고
    • A peek into the complex realm of histone phosphorylation
    • PID: 22006017, COI: 1:CAS:528:DC%2BC3MXhs1ShsrnK
    • Banerjee T, Chakravarti D (2011) A peek into the complex realm of histone phosphorylation. Mol Cell Biol 31(24):4858–4873
    • (2011) Mol Cell Biol , vol.31 , Issue.24 , pp. 4858-4873
    • Banerjee, T.1    Chakravarti, D.2
  • 6
    • 79952534189 scopus 로고    scopus 로고
    • Regulation of chromatin by histone modifications
    • PID: 21321607, COI: 1:CAS:528:DC%2BC3MXivVCgurc%3D
    • Bannister AJ, Kouzarides T (2011) Regulation of chromatin by histone modifications. Cell Res 21(3):381–395
    • (2011) Cell Res , vol.21 , Issue.3 , pp. 381-395
    • Bannister, A.J.1    Kouzarides, T.2
  • 7
    • 34948900481 scopus 로고    scopus 로고
    • Histone H3K4 demethylases are essential in development and differentiation
    • PID: 17713579, COI: 1:CAS:528:DC%2BD2sXhtVGqs7%2FL
    • Benevolenskaya EV (2007) Histone H3K4 demethylases are essential in development and differentiation. Biochem Cell Biol 85(4):435–443
    • (2007) Biochem Cell Biol , vol.85 , Issue.4 , pp. 435-443
    • Benevolenskaya, E.V.1
  • 8
    • 84877322025 scopus 로고    scopus 로고
    • On your histone mark, SET, methylate
    • PID: 23625014, COI: 1:CAS:528:DC%2BC2cXjs1yisb4%3D
    • Binda O (2013) On your histone mark, SET, methylate. Epigenetics 8(5):457–463
    • (2013) Epigenetics , vol.8 , Issue.5 , pp. 457-463
    • Binda, O.1
  • 9
    • 0029348071 scopus 로고
    • The HMG-14/-17 chromosomal protein family: architectural elements that enhance transcription from chromatin templates
    • PID: 8562917, COI: 1:CAS:528:DyaK2MXotlOqu7Y%3D
    • Bustin M, Trieschmann L, Postnikov YV (1995) The HMG-14/-17 chromosomal protein family: architectural elements that enhance transcription from chromatin templates. Semin Cell Biol 6(4):247–255
    • (1995) Semin Cell Biol , vol.6 , Issue.4 , pp. 247-255
    • Bustin, M.1    Trieschmann, L.2    Postnikov, Y.V.3
  • 10
    • 35348938519 scopus 로고    scopus 로고
    • JMJD6 is a histone arginine demethylase
    • PID: 17947579, COI: 1:CAS:528:DC%2BD2sXhtFOjtb%2FE
    • Chang B, Chen Y, Zhao Y, Bruick RK (2007) JMJD6 is a histone arginine demethylase. Science 318(5849):444–447
    • (2007) Science , vol.318 , Issue.5849 , pp. 444-447
    • Chang, B.1    Chen, Y.2    Zhao, Y.3    Bruick, R.K.4
  • 11
    • 0942276360 scopus 로고    scopus 로고
    • The structure of the AXH domain of spinocerebellar ataxin-1
    • PID: 14583607, COI: 1:CAS:528:DC%2BD2cXmtlCrtQ%3D%3D
    • Chen YW, Allen MD, Veprintsev DB, Löwe J, Bycroft M (2004) The structure of the AXH domain of spinocerebellar ataxin-1. J Biol Chem 279(5):3758–3765
    • (2004) J Biol Chem , vol.279 , Issue.5 , pp. 3758-3765
    • Chen, Y.W.1    Allen, M.D.2    Veprintsev, D.B.3    Löwe, J.4    Bycroft, M.5
  • 13
    • 79961209798 scopus 로고    scopus 로고
    • Epigenetic gene regulation by plant Jumonji group of histone demethylase
    • PID: 21419882, COI: 1:CAS:528:DC%2BC3MXhtVaisLbM
    • Chen X, Hu Y, Zhou DX (2011) Epigenetic gene regulation by plant Jumonji group of histone demethylase. Biochim Biophys Acta 1809(8):421–426
    • (2011) Biochim Biophys Acta , vol.1809 , Issue.8 , pp. 421-426
    • Chen, X.1    Hu, Y.2    Zhou, D.X.3
  • 14
    • 84862622207 scopus 로고    scopus 로고
    • The histone H3 Lys 27 demethylase JMJD3 regulates gene expression by impacting transcriptional elongation
    • PID: 22713873, COI: 1:CAS:528:DC%2BC38XhtVegs7zP
    • Chen S, Ma J, Wu F, Xiong LJ, Ma H, Xu W, Lv R, Li X, Villen J, Gygi SP, Liu XS, Shi Y (2012) The histone H3 Lys 27 demethylase JMJD3 regulates gene expression by impacting transcriptional elongation. Genes Dev 26(12):1364–1375
    • (2012) Genes Dev , vol.26 , Issue.12 , pp. 1364-1375
    • Chen, S.1    Ma, J.2    Wu, F.3    Xiong, L.J.4    Ma, H.5    Xu, W.6    Lv, R.7    Li, X.8    Villen, J.9    Gygi, S.P.10    Liu, X.S.11    Shi, Y.12
  • 15
    • 84873502934 scopus 로고    scopus 로고
    • Structural basis of a histone H3 lysine 4 demethylase required for stem elongation in rice
    • PID: 23357881, COI: 1:CAS:528:DC%2BC3sXivVehu74%3D
    • Chen Q, Chen X, Wang Q, Zhang F, Lou Z, Zhang Q, Zhou DX (2013) Structural basis of a histone H3 lysine 4 demethylase required for stem elongation in rice. PLoS Genet 9(1):e1003239
    • (2013) PLoS Genet , vol.9 , Issue.1 , pp. e1003239
    • Chen, Q.1    Chen, X.2    Wang, Q.3    Zhang, F.4    Lou, Z.5    Zhang, Q.6    Zhou, D.X.7
  • 16
    • 84859828671 scopus 로고    scopus 로고
    • Control of seed germination by light-induced histone arginine demethylation activity
    • PID: 22483719, COI: 1:CAS:528:DC%2BC38Xlt1KnsLw%3D
    • Cho JN, Ryu JY, Jeong YM, Park J, Song JJ, Amasino RM, Noh B, Noh YS (2012) Control of seed germination by light-induced histone arginine demethylation activity. Dev Cell 22(4):736–748
    • (2012) Dev Cell , vol.22 , Issue.4 , pp. 736-748
    • Cho, J.N.1    Ryu, J.Y.2    Jeong, Y.M.3    Park, J.4    Song, J.J.5    Amasino, R.M.6    Noh, B.7    Noh, Y.S.8
  • 17
    • 1642464740 scopus 로고    scopus 로고
    • Phylogenetic analysis of Sec7-domain-containing Arf nucleotide exchangers
    • PID: 14742722, COI: 1:CAS:528:DC%2BD2cXivFamu70%3D
    • Cox R, Mason-Gamer RJ, Jackson CL, Segev N (2004) Phylogenetic analysis of Sec7-domain-containing Arf nucleotide exchangers. Mol Biol Cell 15(4):1487–1505
    • (2004) Mol Biol Cell , vol.15 , Issue.4 , pp. 1487-1505
    • Cox, R.1    Mason-Gamer, R.J.2    Jackson, C.L.3    Segev, N.4
  • 18
    • 0032860066 scopus 로고    scopus 로고
    • The F-box: a new motif for ubiquitin dependent proteolysis in cell cycle regulation and signal transduction
    • PID: 10581972, COI: 1:CAS:528:DyaK1MXntlWltrk%3D
    • Craig KL, Tyers M (1999) The F-box: a new motif for ubiquitin dependent proteolysis in cell cycle regulation and signal transduction. Prog Biophys Mol Biol 72(3):299–328
    • (1999) Prog Biophys Mol Biol , vol.72 , Issue.3 , pp. 299-328
    • Craig, K.L.1    Tyers, M.2
  • 20
    • 84868706322 scopus 로고    scopus 로고
    • Crystal structure and functional analysis of JMJD5 indicate an alternate specificity and function
    • PID: 22851697
    • Del Rizzo PA, Krishnan S, Trievel RC (2012) Crystal structure and functional analysis of JMJD5 indicate an alternate specificity and function. Mol Cell Biol 32(19):4044–4052
    • (2012) Mol Cell Biol , vol.32 , Issue.19 , pp. 4044-4052
    • Del Rizzo, P.A.1    Krishnan, S.2    Trievel, R.C.3
  • 21
    • 69349098474 scopus 로고    scopus 로고
    • Epigenetics: definition, mechanisms and clinical perspective
    • PID: 19711245, COI: 1:CAS:528:DC%2BD1MXhtFOis7zM
    • Dupont C, Armant DR, Brenner CA (2009) Epigenetics: definition, mechanisms and clinical perspective. Semin Reprod Med 27(5):351–357
    • (2009) Semin Reprod Med , vol.27 , Issue.5 , pp. 351-357
    • Dupont, C.1    Armant, D.R.2    Brenner, C.A.3
  • 23
    • 84867555058 scopus 로고    scopus 로고
    • IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis
    • PID: 22772985, COI: 1:CAS:528:DC%2BC38XhsFWktb%2FF
    • Fan D, Dai Y, Wang X, Wang Z, He H, Yang H, Cao Y, Deng XW, Ma L (2012) IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis. Nucleic Acids Res 40(18):8905–8916
    • (2012) Nucleic Acids Res , vol.40 , Issue.18 , pp. 8905-8916
    • Fan, D.1    Dai, Y.2    Wang, X.3    Wang, Z.4    He, H.5    Yang, H.6    Cao, Y.7    Deng, X.W.8    Ma, L.9
  • 25
    • 77954021592 scopus 로고    scopus 로고
    • The structure of the FYR domain of transforming growth factor beta regulator 1
    • PID: 20506279
    • García-Alai MM, Allen MD, Joerger AC, Bycroft M (2010) The structure of the FYR domain of transforming growth factor beta regulator 1. Protein Sci 19(7):1432–1438
    • (2010) Protein Sci , vol.19 , Issue.7 , pp. 1432-1438
    • García-Alai, M.M.1    Allen, M.D.2    Joerger, A.C.3    Bycroft, M.4
  • 26
    • 44649122151 scopus 로고    scopus 로고
    • Role of histone modifications in defining chromatin structure and function
    • PID: 18225984, COI: 1:CAS:528:DC%2BD1cXksFait7s%3D
    • Gelato KA, Fischle W (2008) Role of histone modifications in defining chromatin structure and function. Biol Chem 389(4):353–363
    • (2008) Biol Chem , vol.389 , Issue.4 , pp. 353-363
    • Gelato, K.A.1    Fischle, W.2
  • 28
    • 84859047140 scopus 로고    scopus 로고
    • The hydroxylation activity of Jmjd6 is required for its homo-oligomerization
    • PID: 22189873, COI: 1:CAS:528:DC%2BC38XjvVWjsLo%3D
    • Han G, Li J, Wang Y, Li X, Mao H, Liu Y, Chen CD (2012) The hydroxylation activity of Jmjd6 is required for its homo-oligomerization. J Cell Biochem 113(5):1663–1670
    • (2012) J Cell Biochem , vol.113 , Issue.5 , pp. 1663-1670
    • Han, G.1    Li, J.2    Wang, Y.3    Li, X.4    Mao, H.5    Liu, Y.6    Chen, C.D.7
  • 29
    • 84855268563 scopus 로고    scopus 로고
    • Polycomb group complexes mediate developmental transitions in plants
    • PID: 22086420, COI: 1:CAS:528:DC%2BC38XltFSnsL8%3D
    • Holec S, Berger F (2012) Polycomb group complexes mediate developmental transitions in plants. Plant Physiol 158(1):35–43
    • (2012) Plant Physiol , vol.158 , Issue.1 , pp. 35-43
    • Holec, S.1    Berger, F.2
  • 30
    • 77953899257 scopus 로고    scopus 로고
    • Functional characterization of pectin methylesterase inhibitor (PMEI) in wheat
    • PID: 20558896, COI: 1:CAS:528:DC%2BC3cXhtV2ns7%2FJ
    • Hong MJ, Kim DY, Lee TG, Jeon WB, Seo YW (2010) Functional characterization of pectin methylesterase inhibitor (PMEI) in wheat. Genes Genet Syst 85(2):97–106
    • (2010) Genes Genet Syst , vol.85 , Issue.2 , pp. 97-106
    • Hong, M.J.1    Kim, D.Y.2    Lee, T.G.3    Jeon, W.B.4    Seo, Y.W.5
  • 31
    • 78649664485 scopus 로고    scopus 로고
    • Structural insights into histone lysine demethylation
    • PID: 20970991, COI: 1:CAS:528:DC%2BC3cXhsV2js77P
    • Hou H, Yu H (2010) Structural insights into histone lysine demethylation. Curr Opin Struct Biol 20(6):739–748
    • (2010) Curr Opin Struct Biol , vol.20 , Issue.6 , pp. 739-748
    • Hou, H.1    Yu, H.2
  • 32
    • 77955291830 scopus 로고    scopus 로고
    • The JmjN domain of Jhd2 is important for its protein stability, and the plant homeodomain (PHD) finger mediates its chromatin association independent of H3K4 methylation
    • PID: 20538609, COI: 1:CAS:528:DC%2BC3cXpsFemsLs%3D
    • Huang F, Chandrasekharan MB, Chen YC, Bhaskara S, Hiebert SW, Sun ZW (2010) The JmjN domain of Jhd2 is important for its protein stability, and the plant homeodomain (PHD) finger mediates its chromatin association independent of H3K4 methylation. J Biol Chem 285(32):24548–24561
    • (2010) J Biol Chem , vol.285 , Issue.32 , pp. 24548-24561
    • Huang, F.1    Chandrasekharan, M.B.2    Chen, Y.C.3    Bhaskara, S.4    Hiebert, S.W.5    Sun, Z.W.6
  • 33
    • 83355161456 scopus 로고    scopus 로고
    • Phylogenetic analysis and classification of the Brassica rapa SET-domain protein family
    • PID: 22168908, COI: 1:CAS:528:DC%2BC38Xislantrg%3D
    • Huang Y, Liu C, Shen WH, Ruan Y (2011) Phylogenetic analysis and classification of the Brassica rapa SET-domain protein family. BMC Plant Biol 11:175
    • (2011) BMC Plant Biol , vol.11 , pp. 175
    • Huang, Y.1    Liu, C.2    Shen, W.H.3    Ruan, Y.4
  • 34
    • 84862909294 scopus 로고    scopus 로고
    • Jmjd5, an H3K36me2 histone demethylase, modulates embryonic cell proliferation through the regulation of Cdkn1a expression
    • PID: 22241836, COI: 1:CAS:528:DC%2BC38XktlGjsr0%3D
    • Ishimura A, Minehata K, Terashima M, Kondoh G, Hara T, Suzuki T (2012) Jmjd5, an H3K36me2 histone demethylase, modulates embryonic cell proliferation through the regulation of Cdkn1a expression. Development 139(4):749–759
    • (2012) Development , vol.139 , Issue.4 , pp. 749-759
    • Ishimura, A.1    Minehata, K.2    Terashima, M.3    Kondoh, G.4    Hara, T.5    Suzuki, T.6
  • 35
    • 34249819663 scopus 로고    scopus 로고
    • F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress
    • PID: 17293439, COI: 1:CAS:528:DC%2BD2sXksFWjtrk%3D
    • Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiol 143(4):1467–1483
    • (2007) Plant Physiol , vol.143 , Issue.4 , pp. 1467-1483
    • Jain, M.1    Nijhawan, A.2    Arora, R.3    Agarwal, P.4    Ray, S.5    Sharma, P.6    Kapoor, S.7    Tyagi, A.K.8    Khurana, J.P.9
  • 36
    • 71049163028 scopus 로고    scopus 로고
    • Repression of Flowering Locus T chromatin by functionally redundant histone H3 lysine 4 demethylases in Arabidopsis
    • PID: 19946624
    • Jeong JH, Song HR, Ko JH, Jeong YM, Kwon YE, Seol JH, Amasino RM, Noh B, Noh YS (2009) Repression of Flowering Locus T chromatin by functionally redundant histone H3 lysine 4 demethylases in Arabidopsis. PLoS One 4(11):e8033
    • (2009) PLoS One , vol.4 , Issue.11 , pp. e8033
    • Jeong, J.H.1    Song, H.R.2    Ko, J.H.3    Jeong, Y.M.4    Kwon, Y.E.5    Seol, J.H.6    Amasino, R.M.7    Noh, B.8    Noh, Y.S.9
  • 37
    • 37249022362 scopus 로고    scopus 로고
    • Arabidopsis relatives of the human lysine-specific Demethylase1 repress the expression of FWA and Flowering Locus C and thus promote the floral transition
    • PID: 17921315, COI: 1:CAS:528:DC%2BD2sXhsVersLjE
    • Jiang D, Yang W, He Y, Amasino RM (2007) Arabidopsis relatives of the human lysine-specific Demethylase1 repress the expression of FWA and Flowering Locus C and thus promote the floral transition. Plant Cell 19(10):2975–2987
    • (2007) Plant Cell , vol.19 , Issue.10 , pp. 2975-2987
    • Jiang, D.1    Yang, W.2    He, Y.3    Amasino, R.M.4
  • 38
    • 0034266806 scopus 로고    scopus 로고
    • RING finger proteins: mediators of ubiquitin ligase activity
    • PID: 11007473, COI: 1:CAS:528:DC%2BD3cXmsFWit7s%3D
    • Joazeiro CA, Weissman AM (2000) RING finger proteins: mediators of ubiquitin ligase activity. Cell 102(5):549–552
    • (2000) Cell , vol.102 , Issue.5 , pp. 549-552
    • Joazeiro, C.A.1    Weissman, A.M.2
  • 39
    • 79956215355 scopus 로고    scopus 로고
    • JMJD5 Functions in concert with TOC1 in the Arabidopsis circadian system
    • PID: 21358285, COI: 1:CAS:528:DC%2BC38Xht1yjtrY%3D
    • Jones MA, Harmer S (2011) JMJD5 Functions in concert with TOC1 in the Arabidopsis circadian system. Plant Signal Behav 6(3):445–448
    • (2011) Plant Signal Behav , vol.6 , Issue.3 , pp. 445-448
    • Jones, M.A.1    Harmer, S.2
  • 41
    • 78650717705 scopus 로고    scopus 로고
    • Jumonji domain protein JMJD5 functions in both the plant and human circadian systems
    • PID: 21115819, COI: 1:CAS:528:DC%2BC3cXhs1WisL3F
    • Jones MA, Covington MF, DiTacchio L, Vollmers C, Panda S, Harmer SL (2010) Jumonji domain protein JMJD5 functions in both the plant and human circadian systems. PNAS 107(50):21623–21628
    • (2010) PNAS , vol.107 , Issue.50 , pp. 21623-21628
    • Jones, M.A.1    Covington, M.F.2    DiTacchio, L.3    Vollmers, C.4    Panda, S.5    Harmer, S.L.6
  • 42
    • 0036120635 scopus 로고    scopus 로고
    • The PHD type zinc finger is an integral part of the CBP acetyltransferase domain
    • PID: 11884585, COI: 1:CAS:528:DC%2BD38Xit1KisLs%3D
    • Kalkhoven E, Teunissen H, Houweling A, Verrijzer CP, Zantema A (2002) The PHD type zinc finger is an integral part of the CBP acetyltransferase domain. Mol Cell Biol 22(7):1961–1970
    • (2002) Mol Cell Biol , vol.22 , Issue.7 , pp. 1961-1970
    • Kalkhoven, E.1    Teunissen, H.2    Houweling, A.3    Verrijzer, C.P.4    Zantema, A.5
  • 43
    • 1942469319 scopus 로고    scopus 로고
    • Structure and DNA-binding sites of the SWI1 AT-rich interaction domain (ARID) suggest determinants for sequence-specific DNA recognition
    • PID: 14722072, COI: 1:CAS:528:DC%2BD2cXivF2qurY%3D
    • Kim S, Zhang Z, Upchurch S, Isern N, Chen Y (2004) Structure and DNA-binding sites of the SWI1 AT-rich interaction domain (ARID) suggest determinants for sequence-specific DNA recognition. J Biol Chem 279(16):16670–16676
    • (2004) J Biol Chem , vol.279 , Issue.16 , pp. 16670-16676
    • Kim, S.1    Zhang, Z.2    Upchurch, S.3    Isern, N.4    Chen, Y.5
  • 44
    • 33747455678 scopus 로고    scopus 로고
    • JmjC-domain-containing proteins and histone demethylation
    • PID: 16983801, COI: 1:CAS:528:DC%2BD28Xot1Ggu74%3D
    • Klose RJ, Kallin EM, Zhang Y (2006) JmjC-domain-containing proteins and histone demethylation. Nat Rev Genet 7(9):715–727
    • (2006) Nat Rev Genet , vol.7 , Issue.9 , pp. 715-727
    • Klose, R.J.1    Kallin, E.M.2    Zhang, Y.3
  • 45
    • 0036288192 scopus 로고    scopus 로고
    • Plant HMG proteins bearing the AT-hook motif
    • COI: 1:CAS:528:DC%2BD38XksVSns7o%3D
    • Klosterman SJ, Hadwiger LA (2002) Plant HMG proteins bearing the AT-hook motif. Plant Sci 162(6):855–866
    • (2002) Plant Sci , vol.162 , Issue.6 , pp. 855-866
    • Klosterman, S.J.1    Hadwiger, L.A.2
  • 46
    • 0032701795 scopus 로고    scopus 로고
    • Zinc finger peptides for the regulation of gene expression
    • PID: 10529348, COI: 1:CAS:528:DyaK1MXms12rtLs%3D
    • Klug A (1999) Zinc finger peptides for the regulation of gene expression. J Mol Biol 293(2):215–218
    • (1999) J Mol Biol , vol.293 , Issue.2 , pp. 215-218
    • Klug, A.1
  • 47
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • PID: 17320507, COI: 1:CAS:528:DC%2BD2sXis12ju7Y%3D
    • Kouzarides T (2007) Chromatin modifications and their function. Cell 128(4):693–705
    • (2007) Cell , vol.128 , Issue.4 , pp. 693-705
    • Kouzarides, T.1
  • 49
    • 44649163849 scopus 로고    scopus 로고
    • Mechanisms involved in the regulation of histone lysine demethylases
    • PID: 18440794, COI: 1:CAS:528:DC%2BD1cXmvV2ls7k%3D
    • Lan F, Nottke AC, Shi Y (2008) Mechanisms involved in the regulation of histone lysine demethylases. Curr Opin Cell Biol 20:316–325
    • (2008) Curr Opin Cell Biol , vol.20 , pp. 316-325
    • Lan, F.1    Nottke, A.C.2    Shi, Y.3
  • 50
    • 5144232784 scopus 로고    scopus 로고
    • ZZ domain of CBP: an unusual zinc finger fold in a protein interaction module
    • PID: 15476823, COI: 1:CAS:528:DC%2BD2cXotlClu74%3D
    • Legge GB, Martinez-Yamout MA, Hambly DM, Trinh T, Lee BM, Dyson HJ, Wright PE (2004) ZZ domain of CBP: an unusual zinc finger fold in a protein interaction module. J Mol Biol 343(4):1081–1093
    • (2004) J Mol Biol , vol.343 , Issue.4 , pp. 1081-1093
    • Legge, G.B.1    Martinez-Yamout, M.A.2    Hambly, D.M.3    Trinh, T.4    Lee, B.M.5    Dyson, H.J.6    Wright, P.E.7
  • 51
    • 68349135058 scopus 로고    scopus 로고
    • Histone modification patterns and epigenetic codes
    • PID: 19168116, COI: 1:CAS:528:DC%2BD1MXhtVSns7%2FI
    • Lennartsson A, Ekwall K (2009) Histone modification patterns and epigenetic codes. Biochim Biophys Acta 1790(9):863–868
    • (2009) Biochim Biophys Acta , vol.1790 , Issue.9 , pp. 863-868
    • Lennartsson, A.1    Ekwall, K.2
  • 52
    • 84860995116 scopus 로고    scopus 로고
    • BcJMJ30, the gene encoding jmjC domain-containing histone demethylase is associated with pollen development and fertilization in Brassica campestris ssp. chinensis
    • COI: 1:CAS:528:DC%2BC38XntFWqsLc%3D
    • Li Y, Qiu L, Huang L, Cao J (2012) BcJMJ30, the gene encoding jmjC domain-containing histone demethylase is associated with pollen development and fertilization in Brassica campestris ssp. chinensis. Plant Mol Biol Rep 30(3):529–538
    • (2012) Plant Mol Biol Rep , vol.30 , Issue.3 , pp. 529-538
    • Li, Y.1    Qiu, L.2    Huang, L.3    Cao, J.4
  • 53
    • 84891524616 scopus 로고    scopus 로고
    • Jumonji C domain protein JMJ705-mediated removal of histone H3 lysine 27 trimethylation is involved in defense-related gene activation in rice
    • PID: 24280387, COI: 1:CAS:528:DC%2BC2cXitVOqsrc%3D
    • Li T, Chen X, Zhong X, Zhao Y, Liu X, Zhou S, Cheng S, Zhou DX (2013) Jumonji C domain protein JMJ705-mediated removal of histone H3 lysine 27 trimethylation is involved in defense-related gene activation in rice. Plant Cell 25(11):4725–4736
    • (2013) Plant Cell , vol.25 , Issue.11 , pp. 4725-4736
    • Li, T.1    Chen, X.2    Zhong, X.3    Zhao, Y.4    Liu, X.5    Zhou, S.6    Cheng, S.7    Zhou, D.X.8
  • 54
    • 84872330923 scopus 로고    scopus 로고
    • Targeting the JMJD2 histone demethylases to epigenetically control herpesvirus infection and reactivation from latency
    • PID: 23303604
    • Liang Y, Vogel JL, Arbuckle JH, Rai G, Jadhav A, Simeonov A, Maloney DJ, Kristie TM (2013) Targeting the JMJD2 histone demethylases to epigenetically control herpesvirus infection and reactivation from latency. Sci Transl Med 5(167):167ra5
    • (2013) Sci Transl Med , vol.5 , Issue.167 , pp. 167ra5
    • Liang, Y.1    Vogel, J.L.2    Arbuckle, J.H.3    Rai, G.4    Jadhav, A.5    Simeonov, A.6    Maloney, D.J.7    Kristie, T.M.8
  • 55
    • 35348982301 scopus 로고    scopus 로고
    • Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells
    • PID: 17938240, COI: 1:CAS:528:DC%2BD2sXht1WnsbjO
    • Loh YH, Zhang W, Chen X, George J, Ng HH (2007) Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells. Genes Dev 21(20):2545–2557
    • (2007) Genes Dev , vol.21 , Issue.20 , pp. 2545-2557
    • Loh, Y.H.1    Zhang, W.2    Chen, X.3    George, J.4    Ng, H.H.5
  • 56
    • 0033613222 scopus 로고    scopus 로고
    • RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination
    • PID: 10500182, COI: 1:CAS:528:DyaK1MXmvVCmsb4%3D
    • Lorick KL, Jensen JP, Fang S, Ong AM, Hatakeyama S, Weissman AM (1999) RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. PNAS 96(20):11364–11369
    • (1999) PNAS , vol.96 , Issue.20 , pp. 11364-11369
    • Lorick, K.L.1    Jensen, J.P.2    Fang, S.3    Ong, A.M.4    Hatakeyama, S.5    Weissman, A.M.6
  • 57
    • 84890023463 scopus 로고    scopus 로고
    • A mediator methylation mystery: JMJD1C demethylates MDC1 to regulate DNA repair
    • PID: 24304913, COI: 1:CAS:528:DC%2BC3sXhvVOhtr3O
    • Lu J, Matunis MJ (2013) A mediator methylation mystery: JMJD1C demethylates MDC1 to regulate DNA repair. Nat Struct Mol Biol 20(12):1346–1348
    • (2013) Nat Struct Mol Biol , vol.20 , Issue.12 , pp. 1346-1348
    • Lu, J.1    Matunis, M.J.2
  • 58
    • 48249088454 scopus 로고    scopus 로고
    • Comparative analysis of JmjC domain-containing proteins reveals the potential histone demethylases in Arabidopsis and rice
    • PID: 18713399, COI: 1:CAS:528:DC%2BD1cXpt1aisr4%3D
    • Lu F, Li G, Cui X, Liu C, Wang XJ, Cao X (2008) Comparative analysis of JmjC domain-containing proteins reveals the potential histone demethylases in Arabidopsis and rice. J Integr Plant Biol 50(7):886–896
    • (2008) J Integr Plant Biol , vol.50 , Issue.7 , pp. 886-896
    • Lu, F.1    Li, G.2    Cui, X.3    Liu, C.4    Wang, X.J.5    Cao, X.6
  • 59
    • 77949269527 scopus 로고    scopus 로고
    • JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis
    • PID: 20177424
    • Lu F, Cui X, Zhang S, Liu C, Cao X (2010) JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis. Cell Res 20:387–390
    • (2010) Cell Res , vol.20 , pp. 387-390
    • Lu, F.1    Cui, X.2    Zhang, S.3    Liu, C.4    Cao, X.5
  • 60
    • 79959741225 scopus 로고    scopus 로고
    • Arabidopsis REF6 is a histone H3 lysine 27 demethylase
    • PID: 21642989, COI: 1:CAS:528:DC%2BC3MXntV2ktL4%3D
    • Lu F, Cui X, Zhang S, Jenuwein T, Cao X (2011a) Arabidopsis REF6 is a histone H3 lysine 27 demethylase. Nat Genet 43(7):715–719
    • (2011) Nat Genet , vol.43 , Issue.7 , pp. 715-719
    • Lu, F.1    Cui, X.2    Zhang, S.3    Jenuwein, T.4    Cao, X.5
  • 61
    • 79551704893 scopus 로고    scopus 로고
    • The Jumonji C domain-containing protein JMJ30 regulates period length in the Arabidopsis circadian clock
    • PID: 21139085, COI: 1:CAS:528:DC%2BC3MXksFOntL8%3D
    • Lu SX, Knowles SM, Webb CJ, Celaya RB, Cha C, Siu JP, Tobin EM (2011b) The Jumonji C domain-containing protein JMJ30 regulates period length in the Arabidopsis circadian clock. Plant Physiol 155(2):906–915
    • (2011) Plant Physiol , vol.155 , Issue.2 , pp. 906-915
    • Lu, S.X.1    Knowles, S.M.2    Webb, C.J.3    Celaya, R.B.4    Cha, C.5    Siu, J.P.6    Tobin, E.M.7
  • 63
    • 84894270452 scopus 로고    scopus 로고
    • Histone lysine demethylases and their functions in plants
    • COI: 1:CAS:528:DC%2BC2cXivFyqur8%3D
    • Luo M, Hung FY, Yang S, Liu X, Wu K (2014) Histone lysine demethylases and their functions in plants. Plant Mol Biol Rep 32(2):558–565
    • (2014) Plant Mol Biol Rep , vol.32 , Issue.2 , pp. 558-565
    • Luo, M.1    Hung, F.Y.2    Yang, S.3    Liu, X.4    Wu, K.5
  • 64
    • 18544377013 scopus 로고    scopus 로고
    • The RNA recognition motif, a plastic RNA-binding platform to regulate post transcriptional gene expression
    • PID: 15853797, COI: 1:CAS:528:DC%2BD2MXktlCqtr8%3D
    • Maris C, Dominguez C, Allain FH (2005) The RNA recognition motif, a plastic RNA-binding platform to regulate post transcriptional gene expression. FEBS J 272(9):2118–2131
    • (2005) FEBS J , vol.272 , Issue.9 , pp. 2118-2131
    • Maris, C.1    Dominguez, C.2    Allain, F.H.3
  • 65
    • 24144462170 scopus 로고    scopus 로고
    • LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription
    • PID: 16079795, COI: 1:CAS:528:DC%2BD2MXpvFOrtL4%3D
    • Metzger E, Wissmann M, Yin N, Müller JM, Schneider R, Peters AH, Günther T, Buettner R, Schüle R (2005) LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription. Nature 437(7057):436–439
    • (2005) Nature , vol.437 , Issue.7057 , pp. 436-439
    • Metzger, E.1    Wissmann, M.2    Yin, N.3    Müller, J.M.4    Schneider, R.5    Peters, A.H.6    Günther, T.7    Buettner, R.8    Schüle, R.9
  • 66
    • 77953644347 scopus 로고    scopus 로고
    • Reversal of histone methylation: biochemical and molecular mechanisms of histone demethylases
    • PID: 20373914, COI: 1:CAS:528:DC%2BC3cXpslShsbk%3D
    • Mosammaparast N, Shi Y (2010) Reversal of histone methylation: biochemical and molecular mechanisms of histone demethylases. Annu Rev Biochem 79:155–179
    • (2010) Annu Rev Biochem , vol.79 , pp. 155-179
    • Mosammaparast, N.1    Shi, Y.2
  • 67
    • 0032488847 scopus 로고    scopus 로고
    • Structure of the guanine nucleotide exchange factor Sec7 domain of human arno and analysis of the interaction with ARF GTPase
    • PID: 9476900, COI: 1:CAS:528:DyaK1cXhtFGisbw%3D
    • Mossessova E, Gulbis JM, Goldberg J (1998) Structure of the guanine nucleotide exchange factor Sec7 domain of human arno and analysis of the interaction with ARF GTPase. Cell 92(3):415–423
    • (1998) Cell , vol.92 , Issue.3 , pp. 415-423
    • Mossessova, E.1    Gulbis, J.M.2    Goldberg, J.3
  • 68
    • 79959960773 scopus 로고    scopus 로고
    • The diverse functions of Dot1 and H3K79 methylation
    • COI: 1:CAS:528:DC%2BC3MXptlSjsLY%3D
    • Nguyen AT, Zhang Y (2011) The diverse functions of Dot1 and H3K79 methylation. GenesDev 25(13):1345–1358
    • (2011) GenesDev , vol.25 , Issue.13 , pp. 1345-1358
    • Nguyen, A.T.1    Zhang, Y.2
  • 69
    • 16444370435 scopus 로고    scopus 로고
    • Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time
    • PID: 15377760, COI: 1:CAS:528:DC%2BD2cXptVSiu7k%3D
    • Noh B, Lee SH, Kim HJ, Yi G, Shin EA, Lee M, Jung KJ, Doyle MR, Amasino RM, Noh YS (2004) Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time. Plant Cell 16(10):2601–2613
    • (2004) Plant Cell , vol.16 , Issue.10 , pp. 2601-2613
    • Noh, B.1    Lee, S.H.2    Kim, H.J.3    Yi, G.4    Shin, E.A.5    Lee, M.6    Jung, K.J.7    Doyle, M.R.8    Amasino, R.M.9    Noh, Y.S.10
  • 70
    • 84878189918 scopus 로고    scopus 로고
    • The histone demethylase JMJD1A regulates adrenomedullin-mediated cell proliferation in hepatocellular carcinoma under hypoxia
    • PID: 23583388, COI: 1:CAS:528:DC%2BC3sXntlSkurk%3D
    • Park SJ, Kim JG, Son TG, Yi JM, Kim ND, Yang K, Heo K (2013) The histone demethylase JMJD1A regulates adrenomedullin-mediated cell proliferation in hepatocellular carcinoma under hypoxia. Biochem Biophys Res Commun 434(4):722–727
    • (2013) Biochem Biophys Res Commun , vol.434 , Issue.4 , pp. 722-727
    • Park, S.J.1    Kim, J.G.2    Son, T.G.3    Yi, J.M.4    Kim, N.D.5    Yang, K.6    Heo, K.7
  • 72
    • 13744250058 scopus 로고    scopus 로고
    • DNA-binding properties of ARID family proteins
    • PID: 15640446, COI: 1:CAS:528:DC%2BD2MXmsVyitA%3D%3D
    • Patsialou A, Wilsker D, Moran E (2005) DNA-binding properties of ARID family proteins. Nucleic Acids Res 33(1):66–80
    • (2005) Nucleic Acids Res , vol.33 , Issue.1 , pp. 66-80
    • Patsialou, A.1    Wilsker, D.2    Moran, E.3
  • 73
    • 84934940832 scopus 로고    scopus 로고
    • Structural definitions of Jumonji family demethylase selectivity
    • PID: 25555749
    • Pilka ES, James T, Lisztwan JH (2015) Structural definitions of Jumonji family demethylase selectivity. Drug Discov Today. doi:10.1016/j.drudis.2014.12.013
    • (2015) Drug Discov Today
    • Pilka, E.S.1    James, T.2    Lisztwan, J.H.3
  • 74
    • 0030034593 scopus 로고    scopus 로고
    • ZZ and TAZ: new putative zinc fingers in dystrophin and other proteins
    • PID: 8848831, COI: 1:CAS:528:DyaK28XnvVOmuw%3D%3D
    • Ponting CP, Blake DJ, Davies KE, Kendrick-Jones J, Winder SJ (1996) ZZ and TAZ: new putative zinc fingers in dystrophin and other proteins. Trends Biochem Sci 21(1):11–13
    • (1996) Trends Biochem Sci , vol.21 , Issue.1 , pp. 11-13
    • Ponting, C.P.1    Blake, D.J.2    Davies, K.E.3    Kendrick-Jones, J.4    Winder, S.J.5
  • 75
    • 79955434258 scopus 로고    scopus 로고
    • Arabidopsis histone lysine methyltransferases
    • PID: 20703330, COI: 1:CAS:528:DC%2BC3cXovV2nsLs%3D
    • Pontvianne F, Blevins T, Pikaard CS (2010) Arabidopsis histone lysine methyltransferases. Adv Bot Res 53:1–22
    • (2010) Adv Bot Res , vol.53 , pp. 1-22
    • Pontvianne, F.1    Blevins, T.2    Pikaard, C.S.3
  • 77
    • 80052385736 scopus 로고    scopus 로고
    • JmjN interacts with JmjC to ensure selective proteolysis of Gis1 by the proteasome
    • PID: 21680636, COI: 1:CAS:528:DC%2BC3MXht1yktr%2FN
    • Quan Z, Oliver SG, Zhang N (2011) JmjN interacts with JmjC to ensure selective proteolysis of Gis1 by the proteasome. Microbiology 157(Pt 9):2694–2701
    • (2011) Microbiology , vol.157 , pp. 2694-2701
    • Quan, Z.1    Oliver, S.G.2    Zhang, N.3
  • 78
    • 80054787805 scopus 로고    scopus 로고
    • Targeting histone demethylases: a new avenue for the fight against cancer
    • PID: 21941621, COI: 1:CAS:528:DC%2BC3MXhtlCgu7jI
    • Rotili D, Mai A (2011) Targeting histone demethylases: a new avenue for the fight against cancer. Genes Cancer 2(6):663–679
    • (2011) Genes Cancer , vol.2 , Issue.6 , pp. 663-679
    • Rotili, D.1    Mai, A.2
  • 79
    • 38549116060 scopus 로고    scopus 로고
    • Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana
    • PID: 18218897, COI: 1:CAS:528:DC%2BD1cXovFGitQ%3D%3D
    • Saze H, Shiraishi A, Miura A, Kakutani T (2008) Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana. Science 319(5862):462–465
    • (2008) Science , vol.319 , Issue.5862 , pp. 462-465
    • Saze, H.1    Shiraishi, A.2    Miura, A.3    Kakutani, T.4
  • 80
    • 77952352352 scopus 로고    scopus 로고
    • JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis
    • PID: 20478993, COI: 1:CAS:528:DC%2BC3cXmsVKltbk%3D
    • Searle IR, Pontes O, Melnyk CW, Smith LM, Baulcombe DC (2010) JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis. Genes Dev 24(10):986–991
    • (2010) Genes Dev , vol.24 , Issue.10 , pp. 986-991
    • Searle, I.R.1    Pontes, O.2    Melnyk, C.W.3    Smith, L.M.4    Baulcombe, D.C.5
  • 81
    • 34547687916 scopus 로고    scopus 로고
    • The function and regulation of the JARID1 family of histone H3 lysine 4 demethylases: the Myc connection
    • PID: 17568193, COI: 1:CAS:528:DC%2BD2sXhtVSqtb3I
    • Secombe J, Eisenman RN (2007) The function and regulation of the JARID1 family of histone H3 lysine 4 demethylases: the Myc connection. Cell Cycle 6(11):1324–1328
    • (2007) Cell Cycle , vol.6 , Issue.11 , pp. 1324-1328
    • Secombe, J.1    Eisenman, R.N.2
  • 82
    • 34547890019 scopus 로고    scopus 로고
    • Functions of site-specific histone acetylation and deacetylation
    • PID: 17362198, COI: 1:CAS:528:DC%2BD2sXhtVehtb7O
    • Shahbazian MD, Grunstein M (2007) Functions of site-specific histone acetylation and deacetylation. Annu Rev Biochem 76:75–100
    • (2007) Annu Rev Biochem , vol.76 , pp. 75-100
    • Shahbazian, M.D.1    Grunstein, M.2
  • 83
    • 84979554537 scopus 로고    scopus 로고
    • Over-expression of histone H3K4 demethylase gene JMJ15 enhances salt tolerance in Arabidopsis
    • PID: 25009544
    • Shen Y, Conde E, Silva N, Audonnet L, Servet C, Wei W, Zhou DX (2014) Over-expression of histone H3K4 demethylase gene JMJ15 enhances salt tolerance in Arabidopsis. Front Plant Sci 5:290
    • (2014) Front Plant Sci , vol.5 , pp. 290
    • Shen, Y.1    Conde, E.2    Silva, N.3    Audonnet, L.4    Servet, C.5    Wei, W.6    Zhou, D.X.7
  • 84
    • 11144332565 scopus 로고    scopus 로고
    • Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
    • PID: 15620353, COI: 1:CAS:528:DC%2BD2MXltlSitg%3D%3D
    • Shi Y, Lan F, Matson C, Mulligan P, Whetstine JR, Cole PA, Casero RA, Shi Y (2004) Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 119(7):941–953
    • (2004) Cell , vol.119 , Issue.7 , pp. 941-953
    • Shi, Y.1    Lan, F.2    Matson, C.3    Mulligan, P.4    Whetstine, J.R.5    Cole, P.A.6    Casero, R.A.7    Shi, Y.8
  • 85
    • 84867096523 scopus 로고    scopus 로고
    • The E3 ligase HOIP specifies linear ubiquitin chain assembly through its RING-IBR-RING domain and the unique LDD extension
    • PID: 22863777, COI: 1:CAS:528:DC%2BC38XhtFCrtrzN
    • Smit JJ, Monteferrario D, Noordermeer SM, van Dijk WJ, van der Reijden BA, Sixma TK (2012) The E3 ligase HOIP specifies linear ubiquitin chain assembly through its RING-IBR-RING domain and the unique LDD extension. EMBO J 31(19):3833–3844
    • (2012) EMBO J , vol.31 , Issue.19 , pp. 3833-3844
    • Smit, J.J.1    Monteferrario, D.2    Noordermeer, S.M.3    van Dijk, W.J.4    van der Reijden, B.A.5    Sixma, T.K.6
  • 86
    • 51649112913 scopus 로고    scopus 로고
    • Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development
    • PID: 18765808, COI: 1:CAS:528:DC%2BD1cXhtFeqsbbO
    • Sun Q, Zhou DX (2008) Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development. PNAS 105(36):13679–13684
    • (2008) PNAS , vol.105 , Issue.36 , pp. 13679-13684
    • Sun, Q.1    Zhou, D.X.2
  • 87
    • 0029004775 scopus 로고
    • Gene trap capture of a novel mouse gene, jumonji, required for neural tube formation
    • PID: 7758946, COI: 1:CAS:528:DyaK2MXlvFShsL0%3D
    • Takeuchi T, Yamazaki Y, Katoh-Fukui Y, Tsuchiya R, Kondo S, Motoyama J, Higashinakagawa T (1995) Gene trap capture of a novel mouse gene, jumonji, required for neural tube formation. Genes Dev 9(10):1211–1222
    • (1995) Genes Dev , vol.9 , Issue.10 , pp. 1211-1222
    • Takeuchi, T.1    Yamazaki, Y.2    Katoh-Fukui, Y.3    Tsuchiya, R.4    Kondo, S.5    Motoyama, J.6    Higashinakagawa, T.7
  • 88
    • 84890330527 scopus 로고    scopus 로고
    • MEGA6: molecular evolutionary genetics analysis version 6.0
    • PID: 24132122, COI: 1:CAS:528:DC%2BC3sXhvVKhurzP
    • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30(12):2725–2729
    • (2013) Mol Biol Evol , vol.30 , Issue.12 , pp. 2725-2729
    • Tamura, K.1    Stecher, G.2    Peterson, D.3    Filipski, A.4    Kumar, S.5
  • 90
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • PID: 7984417, COI: 1:CAS:528:DyaK2MXitlSgu74%3D
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22(22):4673–4680
    • (1994) Nucleic Acids Res , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 91
    • 79961206886 scopus 로고    scopus 로고
    • SET domain proteins in plant development
    • PID: 21664308, COI: 1:CAS:528:DC%2BC3MXhtVaisLnF
    • Thorstensen T, Grini PE, Aalen RB (2011) SET domain proteins in plant development. Biochim Biophys Acta 1809(8):407–420
    • (2011) Biochim Biophys Acta , vol.1809 , Issue.8 , pp. 407-420
    • Thorstensen, T.1    Grini, P.E.2    Aalen, R.B.3
  • 92
    • 0028110864 scopus 로고
    • The protein encoded by the Drosophila position-effect variegation suppressor gene Su(var)3-9 combines domains of antagonistic regulators of homeotic gene complexes
    • PID: 7915232, COI: 1:CAS:528:DyaK2cXmvFCisLc%3D
    • Tschiersch B, Hofmann A, Krauss V, Dorn R, Korge G, Reuter G (1994) The protein encoded by the Drosophila position-effect variegation suppressor gene Su(var)3-9 combines domains of antagonistic regulators of homeotic gene complexes. EMBO J 13:3822–3831
    • (1994) EMBO J , vol.13 , pp. 3822-3831
    • Tschiersch, B.1    Hofmann, A.2    Krauss, V.3    Dorn, R.4    Korge, G.5    Reuter, G.6
  • 93
    • 32844454603 scopus 로고    scopus 로고
    • Histone demethylation by a family of JmjC domain-containing proteins
    • PID: 16362057, COI: 1:CAS:528:DC%2BD28XhsVSkuro%3D
    • Tsukada Y, Fang J, Erdjument-Bromage H, Warren ME, Borchers CH, Tempst P, Zhang Y (2006) Histone demethylation by a family of JmjC domain-containing proteins. Nature 439(7078):811–816
    • (2006) Nature , vol.439 , Issue.7078 , pp. 811-816
    • Tsukada, Y.1    Fang, J.2    Erdjument-Bromage, H.3    Warren, M.E.4    Borchers, C.H.5    Tempst, P.6    Zhang, Y.7
  • 94
    • 0036897852 scopus 로고    scopus 로고
    • Genome-wide histone modifications: gaining specificity by preventing promiscuity
    • PID: 12473351
    • van Leeuwen F, Gottschling DE (2002) Genome-wide histone modifications: gaining specificity by preventing promiscuity. Curr Opin Cell Biol 14(6):756–762
    • (2002) Curr Opin Cell Biol , vol.14 , Issue.6 , pp. 756-762
    • van Leeuwen, F.1    Gottschling, D.E.2
  • 95
    • 17744371504 scopus 로고    scopus 로고
    • Genome-wide analysis of S-Locus F-box-like genes in Arabidopsis thaliana
    • PID: 15821991, COI: 1:CAS:528:DC%2BD2MXjtV2gsLg%3D
    • Wang L, Dong L, Zhang Y, Zhang Y, Wu W, Deng X, Xue Y (2004) Genome-wide analysis of S-Locus F-box-like genes in Arabidopsis thaliana. Plant Mol Biol 56(6):929–945
    • (2004) Plant Mol Biol , vol.56 , Issue.6 , pp. 929-945
    • Wang, L.1    Dong, L.2    Zhang, Y.3    Zhang, Y.4    Wu, W.5    Deng, X.6    Xue, Y.7
  • 98
    • 84890061632 scopus 로고    scopus 로고
    • JMJD1C demethylates MDC1 to regulate the RNF8 and BRCA1-mediated chromatin response to DNA breaks
    • PID: 24240613, COI: 1:CAS:528:DC%2BC3sXhslygtr7K
    • Watanabe S, Watanabe K, Akimov V, Bartkova J, Blagoev B, Lukas J, Bartek J (2013) JMJD1C demethylates MDC1 to regulate the RNF8 and BRCA1-mediated chromatin response to DNA breaks. Nat Struct Mol Biol 20(12):1425–1433
    • (2013) Nat Struct Mol Biol , vol.20 , Issue.12 , pp. 1425-1433
    • Watanabe, S.1    Watanabe, K.2    Akimov, V.3    Bartkova, J.4    Blagoev, B.5    Lukas, J.6    Bartek, J.7
  • 99
    • 0035839058 scopus 로고    scopus 로고
    • Genes, genetics, and epigenetics: a correspondence
    • COI: 1:CAS:528:DC%2BD3MXmtVWku7g%3D
    • Wu CT, Morris JR (2001) Genes, genetics, and epigenetics: a correspondence. Science 293(5532):1103–1105
    • (2001) Science , vol.293 , Issue.5532 , pp. 1103-1105
    • Wu, C.T.1    Morris, J.R.2
  • 100
    • 77952174701 scopus 로고    scopus 로고
    • A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis
    • PID: 20202164, COI: 1:CAS:528:DC%2BC3cXnt1Ghsbo%3D
    • Yang W, Jiang D, Jiang J, He Y (2010) A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis. Plant J 62(4):663–673
    • (2010) Plant J , vol.62 , Issue.4 , pp. 663-673
    • Yang, W.1    Jiang, D.2    Jiang, J.3    He, Y.4
  • 101
    • 84862505414 scopus 로고    scopus 로고
    • Overexpression of a histone H3K4 demethylase, JMJ15, accelerates flowering time in Arabidopsis
    • PID: 22555401, COI: 1:CAS:528:DC%2BC38XosV2qtrs%3D
    • Yang H, Mo H, Fan D, Cao Y, Cui S, Ma L (2012a) Overexpression of a histone H3K4 demethylase, JMJ15, accelerates flowering time in Arabidopsis. Plant Cell Rep 31(7):1297–1308
    • (2012) Plant Cell Rep , vol.31 , Issue.7 , pp. 1297-1308
    • Yang, H.1    Mo, H.2    Fan, D.3    Cao, Y.4    Cui, S.5    Ma, L.6
  • 102
    • 84860555278 scopus 로고    scopus 로고
    • A companion cell-dominant and developmentally regulated H3K4 demethylase controls flowering time in Arabidopsis via the repression of FLC expression
    • PID: 22536163, COI: 1:CAS:528:DC%2BC38XmsF2rsbo%3D
    • Yang H, Han Z, Cao Y, Fan D, Li H, Mo H, Feng Y, Liu L, Wang Z, Yue Y, Cui S, Chen S, Chai J, Ma L (2012b) A companion cell-dominant and developmentally regulated H3K4 demethylase controls flowering time in Arabidopsis via the repression of FLC expression. PLoS Genet 8(4):e1002664
    • (2012) PLoS Genet , vol.8 , Issue.4 , pp. e1002664
    • Yang, H.1    Han, Z.2    Cao, Y.3    Fan, D.4    Li, H.5    Mo, H.6    Feng, Y.7    Liu, L.8    Wang, Z.9    Yue, Y.10    Cui, S.11    Chen, S.12    Chai, J.13    Ma, L.14
  • 103
    • 44949220180 scopus 로고    scopus 로고
    • Modulation of brassinosteroid-regulated gene expression by Jumonji domain-containing proteins ELF6 and REF6 in Arabidopsis
    • PID: 18467490, COI: 1:CAS:528:DC%2BD1cXmvFKrtL4%3D
    • Yu X, Li L, Li L, Guo M, Chory J, Yin Y (2008) Modulation of brassinosteroid-regulated gene expression by Jumonji domain-containing proteins ELF6 and REF6 in Arabidopsis. PNAS 105(21):7618–7623
    • (2008) PNAS , vol.105 , Issue.21 , pp. 7618-7623
    • Yu, X.1    Li, L.2    Li, L.3    Guo, M.4    Chory, J.5    Yin, Y.6
  • 104
    • 55349106954 scopus 로고    scopus 로고
    • Evolutionary history of histone demethylase families: distinct evolutionary patterns suggest functional divergence
    • PID: 18950507
    • Zhou X, Ma H (2008) Evolutionary history of histone demethylase families: distinct evolutionary patterns suggest functional divergence. BMC Evol Biol 8:294
    • (2008) BMC Evol Biol , vol.8 , pp. 294
    • Zhou, X.1    Ma, H.2
  • 105
    • 84904429667 scopus 로고    scopus 로고
    • JMJD5 regulates cell cycle and pluripotency in human embryonic stem cells
    • PID: 24740926, COI: 1:CAS:528:DC%2BC2cXhs1Chs7zN
    • Zhu H, Hu S, Baker J (2014) JMJD5 regulates cell cycle and pluripotency in human embryonic stem cells. Stem Cells 32(8):2098–2110
    • (2014) Stem Cells , vol.32 , Issue.8 , pp. 2098-2110
    • Zhu, H.1    Hu, S.2    Baker, J.3


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