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Volumn 105, Issue 36, 2008, Pages 13679-13684

Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development

Author keywords

Chromatin; Demethylation; Histone modification

Indexed keywords

H3K9 DEMETHYLASE; HISTONE H3; JUMONJI C PROTEIN; LYSINE; METHYLTRANSFERASE; UNCLASSIFIED DRUG; VEGETABLE PROTEIN;

EID: 51649112913     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0805901105     Document Type: Article
Times cited : (170)

References (36)
  • 1
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • Kouzarides T (2007) Chromatin modifications and their function. Cell 128:693-705.
    • (2007) Cell , vol.128 , pp. 693-705
    • Kouzarides, T.1
  • 2
    • 15744396813 scopus 로고    scopus 로고
    • The key to development: Interpreting the histone code?
    • Margueron R, Trojer P, Reinberg D (2005) The key to development: interpreting the histone code? Curr Opin Genet Dev 15:163-176.
    • (2005) Curr Opin Genet Dev , vol.15 , pp. 163-176
    • Margueron, R.1    Trojer, P.2    Reinberg, D.3
  • 3
    • 25144519737 scopus 로고    scopus 로고
    • An essential role for CoREST in nucleosomal histone 3 lysine 4 demethylation
    • Lee MG, Wynder C, Cooch N, Shiekhattar R (2005) An essential role for CoREST in nucleosomal histone 3 lysine 4 demethylation. Nature 437:432-435.
    • (2005) Nature , vol.437 , pp. 432-435
    • Lee, M.G.1    Wynder, C.2    Cooch, N.3    Shiekhattar, R.4
  • 4
    • 24144462170 scopus 로고    scopus 로고
    • LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription
    • Metzger E, et al. (2005) LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription. Nature 437:436-439.
    • (2005) Nature , vol.437 , pp. 436-439
    • Metzger, E.1
  • 6
    • 32844454603 scopus 로고    scopus 로고
    • Histone demethylation by a family of JmjC domain-containing proteins
    • Tsukada Y, et al. (2006) Histone demethylation by a family of JmjC domain-containing proteins. Nature 439:811-816.
    • (2006) Nature , vol.439 , pp. 811-816
    • Tsukada, Y.1
  • 7
    • 33745146571 scopus 로고    scopus 로고
    • Jmjd2b antagonizes H3K9 trimethylation at pericentric heterochromatin in mammalian cells
    • Fodor BD, et al. (2006) Jmjd2b antagonizes H3K9 trimethylation at pericentric heterochromatin in mammalian cells. Genes Dev 20:1557-1562.
    • (2006) Genes Dev , vol.20 , pp. 1557-1562
    • Fodor, B.D.1
  • 8
    • 33745847680 scopus 로고    scopus 로고
    • The transcriptional repressor JHDM3A demethylates trimethyl histone H3 lysine 9 and lysine 36
    • Klose RJ, et al. (2006) The transcriptional repressor JHDM3A demethylates trimethyl histone H3 lysine 9 and lysine 36. Nature 442:312-316.
    • (2006) Nature , vol.442 , pp. 312-316
    • Klose, R.J.1
  • 9
    • 33646124469 scopus 로고    scopus 로고
    • Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases
    • Whetstine JR, et al. (2006) Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases. Cell 125:467-481.
    • (2006) Cell , vol.125 , pp. 467-481
    • Whetstine, J.R.1
  • 10
    • 35148867907 scopus 로고    scopus 로고
    • UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development
    • Agger K, et al. (2007) UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development. Nature 449:731-734.
    • (2007) Nature , vol.449 , pp. 731-734
    • Agger, K.1
  • 11
    • 33947245128 scopus 로고    scopus 로고
    • RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3
    • Christensen J, et al. (2007) RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3. Cell 128:1063-1076.
    • (2007) Cell , vol.128 , pp. 1063-1076
    • Christensen, J.1
  • 12
    • 33747455678 scopus 로고    scopus 로고
    • JmjC-domain-containing proteins and histone demethylation
    • Klose RJ, Kallin EM, Zhang Y (2006) JmjC-domain-containing proteins and histone demethylation. Nat Rev Genet 7:715-727.
    • (2006) Nat Rev Genet , vol.7 , pp. 715-727
    • Klose, R.J.1    Kallin, E.M.2    Zhang, Y.3
  • 13
    • 16444370435 scopus 로고    scopus 로고
    • Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time
    • Noh B, et al. (2004) Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time. Plant Cell 16:2601-2613.
    • (2004) Plant Cell , vol.16 , pp. 2601-2613
    • Noh, B.1
  • 14
    • 38549116060 scopus 로고    scopus 로고
    • Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana
    • Saze H, Shiraishi A, Miura A, Kakutani T (2008) Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana. Science 319:462-465.
    • (2008) Science , vol.319 , pp. 462-465
    • Saze, H.1    Shiraishi, A.2    Miura, A.3    Kakutani, T.4
  • 15
    • 33646505724 scopus 로고    scopus 로고
    • Structural insights into histone demethylation by JMJD2 family members
    • Chen Z, et al. (2006) Structural insights into histone demethylation by JMJD2 family members. Cell 125:691-702.
    • (2006) Cell , vol.125 , pp. 691-702
    • Chen, Z.1
  • 16
    • 12444307483 scopus 로고    scopus 로고
    • Development of enhancer trap lines for functional analysis of the rice genome
    • Wu C, et al. (2003) Development of enhancer trap lines for functional analysis of the rice genome. Plant J 35:418-427.
    • (2003) Plant J , vol.35 , pp. 418-427
    • Wu, C.1
  • 17
    • 28244445008 scopus 로고    scopus 로고
    • RMD: A rice mutant database for functional analysis of the rice genome
    • Zhang J, et al. (2006) RMD: A rice mutant database for functional analysis of the rice genome. Nucleic Acids Res 34:D745-748.
    • (2006) Nucleic Acids Res , vol.34
    • Zhang, J.1
  • 18
    • 33745393624 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial microRNAs in Arabidopsis
    • Schwab R, Ossowski S, Riester M, Warthmann N, Weigel D (2006) Highly specific gene silencing by artificial microRNAs in Arabidopsis. Plant Cell 18:1121-1133.
    • (2006) Plant Cell , vol.18 , pp. 1121-1133
    • Schwab, R.1    Ossowski, S.2    Riester, M.3    Warthmann, N.4    Weigel, D.5
  • 19
    • 34547656170 scopus 로고    scopus 로고
    • Function and diversification of MADS-box genes in rice
    • Yamaguchi T, Hirano HY (2006) Function and diversification of MADS-box genes in rice. Scientific World J 6:1923-1932.
    • (2006) Scientific World J , vol.6 , pp. 1923-1932
    • Yamaguchi, T.1    Hirano, H.Y.2
  • 20
    • 14644408760 scopus 로고    scopus 로고
    • Rice plant development: From zygote to spikelet
    • Itoh J, et al. (2005) Rice plant development: from zygote to spikelet. Plant Cell Physiol 46:23-47.
    • (2005) Plant Cell Physiol , vol.46 , pp. 23-47
    • Itoh, J.1
  • 21
    • 42149178434 scopus 로고    scopus 로고
    • DH1, a LOB domain-like protein required for glume formation in rice
    • Li A, et al. (2008) DH1, a LOB domain-like protein required for glume formation in rice. Plant Mol Biol 66:491-502.
    • (2008) Plant Mol Biol , vol.66 , pp. 491-502
    • Li, A.1
  • 22
    • 34249068213 scopus 로고    scopus 로고
    • Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis
    • Zhang X, et al. (2007) Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis. PLoS Biol 5:e129.
    • (2007) PLoS Biol , vol.5
    • Zhang, X.1
  • 23
    • 34347324121 scopus 로고    scopus 로고
    • Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27
    • Turck F, et al. (2007) Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27. PLoS Genet 3:e86.
    • (2007) PLoS Genet , vol.3
    • Turck, F.1
  • 24
    • 34548472629 scopus 로고    scopus 로고
    • The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation
    • Zhang X, et al. (2007) The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation. Nat Struct Mol Biol 14:869-871.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 869-871
    • Zhang, X.1
  • 25
    • 33845799903 scopus 로고    scopus 로고
    • Polycomb silencing mechanisms and the management of genomic programmes
    • Schwartz YB, Pirrotta V (2007) Polycomb silencing mechanisms and the management of genomic programmes. Nat Rev Genet 8:9-22.
    • (2007) Nat Rev Genet , vol.8 , pp. 9-22
    • Schwartz, Y.B.1    Pirrotta, V.2
  • 26
    • 23344436787 scopus 로고    scopus 로고
    • Functional characterization of JMJD2A, a histone deacetylase-and retinoblastoma-binding protein
    • Gray SG, et al. (2005) Functional characterization of JMJD2A, a histone deacetylase-and retinoblastoma-binding protein. J Biol Chem 280:28507-28518.
    • (2005) J Biol Chem , vol.280 , pp. 28507-28518
    • Gray, S.G.1
  • 27
    • 22544465244 scopus 로고    scopus 로고
    • JMJD2A is a novel N-CoR-interacting protein and is involved in repression of the human transcription factor achaete scute-like homologue 2 (ASCL2/Hash2)
    • Zhang D, Yoon HG, Wong J (2005) JMJD2A is a novel N-CoR-interacting protein and is involved in repression of the human transcription factor achaete scute-like homologue 2 (ASCL2/Hash2). Mol Cell Biol 25:6404-6414.
    • (2005) Mol Cell Biol , vol.25 , pp. 6404-6414
    • Zhang, D.1    Yoon, H.G.2    Wong, J.3
  • 28
    • 38949126530 scopus 로고    scopus 로고
    • Di- and tri- but not monomethylation on histone H3 lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana
    • Xu L, et al. (2008) Di- and tri- but not monomethylation on histone H3 lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana. Mol Cell Biol 28:1348-1360.
    • (2008) Mol Cell Biol , vol.28 , pp. 1348-1360
    • Xu, L.1
  • 29
    • 0042092512 scopus 로고    scopus 로고
    • Bertrand C, Bergounioux C, Domenichini S, Delarue M, Zhou DX (2003) Arabidopsis histone acetyltransferase AtGCN5 regulates the floral meristem activity through the WUSCHEL/AGAMOUS pathway. J Biol Chem 278:28246-28251
    • Bertrand C, Bergounioux C, Domenichini S, Delarue M, Zhou DX (2003) Arabidopsis histone acetyltransferase AtGCN5 regulates the floral meristem activity through the WUSCHEL/AGAMOUS pathway. J Biol Chem 278:28246-28251.
  • 31
    • 13744260173 scopus 로고    scopus 로고
    • Reversible histone acetylation and deacetylation mediate genomewide, promoter-dependent and locus-specific changes in gene expression during plant development
    • Tian L, et al. (2005) Reversible histone acetylation and deacetylation mediate genomewide, promoter-dependent and locus-specific changes in gene expression during plant development. Genetics 169:337-345.
    • (2005) Genetics , vol.169 , pp. 337-345
    • Tian, L.1
  • 32
    • 34247630796 scopus 로고    scopus 로고
    • SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice
    • Ding Y, et al. (2007) SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice. Plant Cell 19:9-22.
    • (2007) Plant Cell , vol.19 , pp. 9-22
    • Ding, Y.1
  • 33
    • 33745454548 scopus 로고    scopus 로고
    • Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase
    • Ebbs ML, Bender J (2006) Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase. Plant Cell 18:1166-1176.
    • (2006) Plant Cell , vol.18 , pp. 1166-1176
    • Ebbs, M.L.1    Bender, J.2
  • 34
    • 0037041422 scopus 로고    scopus 로고
    • Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
    • Jackson JP, Lindroth AM, Cao X, Jacobsen SE (2002) Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature 416:556-560.
    • (2002) Nature , vol.416 , pp. 556-560
    • Jackson, J.P.1    Lindroth, A.M.2    Cao, X.3    Jacobsen, S.E.4
  • 35
    • 34447126368 scopus 로고    scopus 로고
    • Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice
    • Huang L, et al. (2007) Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice. Plant Physiol 144:1508-1519.
    • (2007) Plant Physiol , vol.144 , pp. 1508-1519
    • Huang, L.1
  • 36
    • 0037356770 scopus 로고    scopus 로고
    • Methylation of histone H3 in euchromatin of plant chromosomes depends on basic nuclear DNA content
    • Houben A, et al. (2003) Methylation of histone H3 in euchromatin of plant chromosomes depends on basic nuclear DNA content. Plant J 33:967-973.
    • (2003) Plant J , vol.33 , pp. 967-973
    • Houben, A.1


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