-
1
-
-
78049249922
-
Quantitative variation for apomictic reproduction in the genus Boechera (Brassicaceae)
-
Aliyu, O.M., Schranz, M.E., and Sharbel, T.F. (2010). Quantitative variation for apomictic reproduction in the genus Boechera (Brassicaceae). Am. J. Bot. 97: 1719–1731.
-
(2010)
Am. J. Bot
, vol.97
, pp. 1719-1731
-
-
Aliyu, O.M.1
Schranz, M.E.2
Sharbel, T.F.3
-
2
-
-
84867806775
-
A generic and tribal synopsis of the Brassicaceae (Cruciferae)
-
Al-Shehbaz, I.A. (2012). A generic and tribal synopsis of the Brassicaceae (Cruciferae). Taxon 61: 931–954.
-
(2012)
Taxon
, vol.61
, pp. 931-954
-
-
Al-Shehbaz, I.A.1
-
3
-
-
33745912988
-
Systematics and phylogeny of the Brassicaceae (Cruciferae): An overview
-
Al-Shehbaz, I.A., Beilstein, M.A., and Kellogg, E.A. (2006). Systematics and phylogeny of the Brassicaceae (Cruciferae): an overview. Plant Syst. Evol. 259: 89–120.
-
(2006)
Plant Syst. Evol
, vol.259
, pp. 89-120
-
-
Al-Shehbaz, I.A.1
Beilstein, M.A.2
Kellogg, E.A.3
-
4
-
-
84890829647
-
The Amborella genome and the evolution of flowering plants
-
Amborella Genome Project
-
Amborella Genome Project (2013). The Amborella genome and the evolution of flowering plants. Science 342: 1241089.
-
(2013)
Science
, vol.342
, pp. 1241089
-
-
-
5
-
-
0012311516
-
Cruciferae
-
V, K. Kubitzki, ed (Heidelberg, Germany: Springer Berlin
-
Appel, O., and Al-Shehbaz, I.A. (2002). Cruciferae. In The Families and Genera of Vascular Plants, Vol. V, K. Kubitzki, ed (Heidelberg, Germany: Springer Berlin), pp. 75–174.
-
(2002)
The Families and Genera of Vascular Plants, Vol
, pp. 75-174
-
-
Appel, O.1
Al-Shehbaz, I.A.2
-
6
-
-
84867789440
-
A fully resolved chloroplast phylogeny of the brassica crops and wild relatives (Brassicaceae: Brassiceae): Novel clades and potential taxonomic implications
-
Arias, T., and Pires, J.C. (2012). A fully resolved chloroplast phylogeny of the brassica crops and wild relatives (Brassicaceae: Brassiceae): Novel clades and potential taxonomic implications. Taxon 61: 980–988.
-
(2012)
Taxon
, vol.61
, pp. 980-988
-
-
Arias, T.1
Pires, J.C.2
-
7
-
-
84892566419
-
Diversification times among Brassica (Brassicaceae) crops suggest hybrid formation after 20 million years of divergence
-
Arias, T., Beilstein, M.A., Tang, M., McKain, M.R., and Pires, J.C. (2014). Diversification times among Brassica (Brassicaceae) crops suggest hybrid formation after 20 million years of divergence. Am. J. Bot. 101: 86–91.
-
(2014)
Am. J. Bot
, vol.101
, pp. 86-91
-
-
Arias, T.1
Beilstein, M.A.2
Tang, M.3
McKain, M.R.4
Pires, J.C.5
-
8
-
-
84859897319
-
Rarely successful polyploids and their legacy in plant genomes
-
Arrigo, N., and Barker, M.S. (2012). Rarely successful polyploids and their legacy in plant genomes. Curr. Opin. Plant Biol. 15: 140–146.
-
(2012)
Curr. Opin. Plant Biol
, vol.15
, pp. 140-146
-
-
Arrigo, N.1
Barker, M.S.2
-
9
-
-
84900302430
-
Characterization of mango (Mangifera indica L.) transcriptome and chloroplast genome
-
Azim, M.K., Khan, I.A., and Zhang, Y. (2014). Characterization of mango (Mangifera indica L.) transcriptome and chloroplast genome. Plant Mol. Biol. 85: 193–208.
-
(2014)
Plant Mol. Biol
, vol.85
, pp. 193-208
-
-
Azim, M.K.1
Khan, I.A.2
Zhang, Y.3
-
10
-
-
33749555527
-
Toward a global phylogeny of the Brassicaceae
-
Bailey, C.D., Koch, M.A., Mayer, M., Mummenhoff, K., O’Kane, S.L., Jr., Warwick, S.I., Windham, M.D., and Al-Shehbaz, I.A. (2006). Toward a global phylogeny of the Brassicaceae. Mol. Biol. Evol. 23: 2142–2160.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 2142-2160
-
-
Bailey, C.D.1
Koch, M.A.2
Mayer, M.3
Mummenhoff, K.4
O’Kane, S.L.5
Warwick, S.I.6
Windham, M.D.7
Al-Shehbaz, I.A.8
-
11
-
-
0002470008
-
Oligocene plants from the upper Ruby river basin, southwestern Montana
-
Becker, H.F. (1961). Oligocene plants from the upper Ruby river basin, southwestern Montana. GSA Memoirs 82: 1–122.
-
(1961)
GSA Memoirs
, vol.82
, pp. 1-122
-
-
Becker, H.F.1
-
12
-
-
33645536890
-
Brassicaceae phylogeny and trichome evolution
-
Beilstein, M.A., Al-Shehbaz, I.A., and Kellogg, E.A. (2006). Brassicaceae phylogeny and trichome evolution. Am. J. Bot. 93: 607–619.
-
(2006)
Am. J. Bot
, vol.93
, pp. 607-619
-
-
Beilstein, M.A.1
Al-Shehbaz, I.A.2
Kellogg, E.A.3
-
13
-
-
78649817356
-
Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana
-
Beilstein, M.A., Nagalingum, N.S., Clements, M.D., Manchester, S.R., and Mathews, S. (2010). Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 107: 18724–18728.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 18724-18728
-
-
Beilstein, M.A.1
Nagalingum, N.S.2
Clements, M.D.3
Manchester, S.R.4
Mathews, S.5
-
14
-
-
84860423660
-
Prunus and Oemleria (Rosaceae) flowers from the late early Eocene Republic flora of northeastern Washington state, USA
-
Benedict, J.C., DeVore, M.L., and Pigg, K.B. (2011). Prunus and Oemleria (Rosaceae) flowers from the late early Eocene Republic flora of northeastern Washington state, USA. Int. J. Plant Sci. 172: 948–958.
-
(2011)
Int. J. Plant Sci
, vol.172
, pp. 948-958
-
-
Benedict, J.C.1
Devore, M.L.2
Pigg, K.B.3
-
15
-
-
0037381673
-
Comparisons with Caenorhbditis (;100 Mb) and Drosophila (;175 Mb) using flow cytometry show genome size in Arabidopsis to be;157 Mb and thus;25% larger than the Arabidopsis Genome Initiative estimates of;125 Mb
-
Bennett, M.D., Leitch, I.J., Price, H.J., and Johnston, J.S. (2003). Comparisons with Caenorhbditis (;100 Mb) and Drosophila (;175 Mb) using flow cytometry show genome size in Arabidopsis to be;157 Mb and thus;25% larger than the Arabidopsis Genome Initiative estimates of;125 Mb. Ann. Bot. (Lond.) 91: 1–11.
-
(2003)
Ann. Bot. (Lond.)
, vol.91
, pp. 1-11
-
-
Bennett, M.D.1
Leitch, I.J.2
Price, H.J.3
Johnston, J.S.4
-
16
-
-
77955624026
-
-
(Oxford, UK: Oxford University Press)
-
Blondel, J., Aronson, J., Bodiou, J.Y., and Boeuf, G. (2010). The Mediterranean Region: Biological Diversity through Time and Space. (Oxford, UK: Oxford University Press).
-
(2010)
The Mediterranean Region: Biological Diversity through Time and Space
-
-
Blondel, J.1
Aronson, J.2
Bodiou, J.Y.3
Boeuf, G.4
-
17
-
-
0037468758
-
Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
-
Bowers, J.E., Chapman, B.A., Rong, J., and Paterson, A.H. (2003). Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422: 433–438.
-
(2003)
Nature
, vol.422
, pp. 433-438
-
-
Bowers, J.E.1
Chapman, B.A.2
Rong, J.3
Paterson, A.H.4
-
18
-
-
33747288704
-
Evolution of larval host plant associations and adaptive radiation in pierid butterflies
-
Braby, M.F., and Trueman, J.W.H. (2006). Evolution of larval host plant associations and adaptive radiation in pierid butterflies. J. Evol. Biol. 19: 1677–1690.
-
(2006)
J. Evol. Biol
, vol.19
, pp. 1677-1690
-
-
Braby, M.F.1
Trueman, J.2
-
19
-
-
79551663581
-
A comparative genomic map for Caulanthus amplexicaulis and related species (Brassicaceae)
-
Burrell, A.M., Taylor, K.G., Williams, R.J., Cantrell, R.T., Menz, M.A., and Pepper, A.E. (2011). A comparative genomic map for Caulanthus amplexicaulis and related species (Brassicaceae). Mol. Ecol. 20: 784–798.
-
(2011)
Mol. Ecol
, vol.20
, pp. 784-798
-
-
Burrell, A.M.1
Taylor, K.G.2
Williams, R.J.3
Cantrell, R.T.4
Menz, M.A.5
Pepper, A.E.6
-
20
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana, J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17: 540–552.
-
(2000)
Mol. Biol. Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
21
-
-
84879482267
-
Deciphering the diploid ancestral genome of the Mesohexaploid Brassica rapa
-
Cheng, F., Mandáková, T., Wu, J., Xie, Q., Lysak, M.A., and Wang, X. (2013). Deciphering the diploid ancestral genome of the Mesohexaploid Brassica rapa. Plant Cell 25: 1541–1554.
-
(2013)
Plant Cell
, vol.25
, pp. 1541-1554
-
-
Cheng, F.1
Mandáková, T.2
Wu, J.3
Xie, Q.4
Lysak, M.A.5
Wang, X.6
-
22
-
-
72649096546
-
Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae)
-
Couvreur, T.L., Franzke, A., Al-Shehbaz, I.A., Bakker, F.T., Koch, M.A., and Mummenhoff, K. (2010). Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae). Mol. Biol. Evol. 27: 55–71.
-
(2010)
Mol. Biol. Evol
, vol.27
, pp. 55-71
-
-
Couvreur, T.L.1
Franzke, A.2
Al-Shehbaz, I.A.3
Bakker, F.T.4
Koch, M.A.5
Mummenhoff, K.6
-
23
-
-
27144519666
-
Genome duplication and the origin of angiosperms. Trends Ecol
-
De Bodt, S., Maere, S., and Van de Peer, Y. (2005). Genome duplication and the origin of angiosperms. Trends Ecol. Evol. (Amst.) 20: 591–597.
-
(2005)
Evol. (Amst.)
, vol.20
, pp. 591-597
-
-
De Bodt, S.1
Maere, S.2
Van De Peer, Y.3
-
24
-
-
33645476522
-
(2001). Butterflies
-
S.A. Levin, ed (San Diego, CA: Academic Press
-
DeVries, P.J. (2001). Butterflies. In The Encyclopedia of Biodiversity, I–V, S.A. Levin, ed (San Diego, CA: Academic Press), pp. 559–573.
-
The Encyclopedia of Biodiversity, I–V
, pp. 559-573
-
-
Devries, P.J.1
-
25
-
-
21644446318
-
Plant DNA flow cytometry and estimation of nuclear genome size
-
Dolezěl, J., and Bartoš, J. (2005). Plant DNA flow cytometry and estimation of nuclear genome size. Ann. Bot. (Lond.) 95: 99–110.
-
(2005)
Ann. Bot. (Lond.)
, vol.95
, pp. 99-110
-
-
Dolezěl, J.1
Bartoš, J.2
-
26
-
-
0000022437
-
Analysis of nuclear DNA content in plant cells by flow cytometry
-
Dolezěl, J., Binarová, P., and Lucretti, S. (1989). Analysis of nuclear DNA content in plant cells by flow cytometry. Biol. Plant. 31: 113–120.
-
(1989)
Biol. Plant
, vol.31
, pp. 113-120
-
-
Dolezěl, J.1
Binarová, P.2
Lucretti, S.3
-
27
-
-
38449104378
-
Estimation of nuclear DNA content in plants using flow cytometry
-
Dolezěl, J., Greilhuber, J., and Suda, J. (2007). Estimation of nuclear DNA content in plants using flow cytometry. Nat. Protoc. 2: 2233–2244.
-
(2007)
Nat. Protoc
, vol.2
, pp. 2233-2244
-
-
Dolezěl, J.1
Greilhuber, J.2
Suda, J.3
-
28
-
-
84989725640
-
Comparison of three fluorochromes for flow cytometric estimation of nuclear DNA content in plants
-
Dolezěl, J., Sgorbati, S., and Lucretti, S. (1992). Comparison of three fluorochromes for flow cytometric estimation of nuclear DNA content in plants. Physiol. Plant. 85: 625–631.
-
(1992)
Physiol. Plant
, vol.85
, pp. 625-631
-
-
Dolezěl, J.1
Sgorbati, S.2
Lucretti, S.3
-
29
-
-
33344465800
-
Relaxed phylogenetics and dating with confidence
-
Drummond, A.J., Ho, S.Y.W., Phillips, M.J., and Rambaut, A. (2006). Relaxed phylogenetics and dating with confidence. PLoS Biol. 4: e88.
-
(2006)
Plos Biol
, vol.4
-
-
Drummond, A.J.1
Ho, S.2
Phillips, M.J.3
Rambaut, A.4
-
30
-
-
84864530626
-
Bayesian phylogenetics with BEAUti and the BEAST 1.7
-
Drummond, A.J., Suchard, M.A., Xie, D., and Rambaut, A. (2012). Bayesian phylogenetics with BEAUti and the BEAST 1.7. Mol. Biol. Evol. 29: 1969–1973.
-
(2012)
Mol. Biol. Evol
, vol.29
, pp. 1969-1973
-
-
Drummond, A.J.1
Suchard, M.A.2
Xie, D.3
Rambaut, A.4
-
31
-
-
33747468291
-
Functional Divergence of AP3 Genes in the MAD World of Flower Development
-
Eckardt, N.A. (2006). Functional Divergence of AP3 Genes in the MAD World of Flower Development. Plant Cell 18: 1779–1781.
-
(2006)
Plant Cell
, vol.18
, pp. 1779-1781
-
-
Eckardt, N.A.1
-
32
-
-
84936817684
-
The butterfly plant arms-race escalated by gene and genome duplications
-
Edger, P.P., et al. (2015). The butterfly plant arms-race escalated by gene and genome duplications. Proc. Natl. Acad. Sci. USA 112: 8362–8366.
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, pp. 8362-8366
-
-
Edger, P.P.1
-
33
-
-
0001940170
-
Polyploidy and distribution
-
W.H. Lewis, ed (New York, London: Plenum Press
-
Ehrendorfer, F. (1980). Polyploidy and distribution. In Polyploidy. Biological Relevance, W.H. Lewis, ed (New York, London: Plenum Press), pp. 45–59.
-
(1980)
Polyploidy. Biological Relevance
, pp. 45-59
-
-
Ehrendorfer, F.1
-
34
-
-
0038396218
-
The age of the Arabidopsis thaliana genome duplication
-
Ermolaeva, M.D., Wu, M., Eisen, J.A., and Salzberg, S.L. (2003). The age of the Arabidopsis thaliana genome duplication. Plant Mol. Biol. 51: 859–866.
-
(2003)
Plant Mol. Biol
, vol.51
, pp. 859-866
-
-
Ermolaeva, M.D.1
Wu, M.2
Eisen, J.A.3
Salzberg, S.L.4
-
35
-
-
65249143921
-
Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event
-
Fawcett, J.A., Maere, S., and Van de Peer, Y. (2009). Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event. Proc. Natl. Acad. Sci. USA 106: 5737–5742.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 5737-5742
-
-
Fawcett, J.A.1
Maere, S.2
Van De Peer, Y.3
-
36
-
-
67650915748
-
Gene duplication and evolutionary novelty in plants
-
Flagel, L.E., and Wendel, J.F. (2009). Gene duplication and evolutionary novelty in plants. New Phytol. 183: 557–564.
-
(2009)
New Phytol
, vol.183
, pp. 557-564
-
-
Flagel, L.E.1
Wendel, J.F.2
-
37
-
-
67649994688
-
Arabidopsis family ties: Molecular phylogeny and age estimates in Brassicaceae
-
Franzke, A., German, D., Al-Shehbaz, I.A., and Mummenhoff, K. (2009). Arabidopsis family ties: molecular phylogeny and age estimates in Brassicaceae. Taxon 58: 425–437.
-
(2009)
Taxon
, vol.58
, pp. 425-437
-
-
Franzke, A.1
German, D.2
Al-Shehbaz, I.A.3
Mummenhoff, K.4
-
38
-
-
84946739049
-
On the age of the mustard family (Brassicaceae)
-
Franzke, A., Koch, M.A., Couvreur, T.L.P., Lysak, M.A., and Mummenhoff, K. (2010). On the age of the mustard family (Brassicaceae). Nature 467: 755.
-
(2010)
Nature
, vol.467
, pp. 755
-
-
Franzke, A.1
Koch, M.A.2
Couvreur, T.3
Lysak, M.A.4
Mummenhoff, K.5
-
39
-
-
79751526175
-
Cabbage family affairs: The evolutionary history of Brassicaceae
-
Franzke, A., Lysak, M.A., Al-Shehbaz, I.A., Koch, M.A., and Mummenhoff, K. (2011). Cabbage family affairs: the evolutionary history of Brassicaceae. Trends Plant Sci. 16: 108–116.
-
(2011)
Trends Plant Sci
, vol.16
, pp. 108-116
-
-
Franzke, A.1
Lysak, M.A.2
Al-Shehbaz, I.A.3
Koch, M.A.4
Mummenhoff, K.5
-
40
-
-
72049130334
-
Catastrophic flood of the Mediterranean after the Messinian salinity crisis
-
Garcia-Castellanos, D., Estrada, F., Jiménez-Munt, I., Gorini, C., Fernàndez, M., Vergés, J., and De Vicente, R. (2009). Catastrophic flood of the Mediterranean after the Messinian salinity crisis. Nature 462: 778–781.
-
(2009)
Nature
, vol.462
, pp. 778-781
-
-
Garcia-Castellanos, D.1
Estrada, F.2
Jiménez-Munt, I.3
Gorini, C.4
Fernàndez, M.5
Vergés, J.6
De Vicente, R.7
-
41
-
-
83455220231
-
Messinian salinity crisis regulated by competing tectonics and erosion at the Gibraltar arc
-
Garcia-Castellanos, D., and Villaseñor, A. (2011). Messinian salinity crisis regulated by competing tectonics and erosion at the Gibraltar arc. Nature 480: 359–363.
-
(2011)
Nature
, vol.480
, pp. 359-363
-
-
Garcia-Castellanos, D.1
Villaseñor, A.2
-
42
-
-
84881028642
-
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
-
Haudry, A., et al. (2013). An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat. Genet. 45: 891–898.
-
(2013)
Nat. Genet
, vol.45
, pp. 891-898
-
-
Haudry, A.1
-
43
-
-
0002156963
-
A systematic and geographical survey of the Old World Cruciferae
-
J.G. Vaughan, A.J. Macleod, and B.M.G. Jones, eds (London: Academic Press
-
Hedge, I.C. (1976). A systematic and geographical survey of the Old World Cruciferae. In The Biology and Chemistry of the Cruciferae, J.G. Vaughan, A.J. Macleod, and B.M.G. Jones, eds (London: Academic Press), pp. 1–45.
-
(1976)
The Biology and Chemistry of the Cruciferae
, pp. 1-45
-
-
Hedge, I.C.1
-
44
-
-
33745004593
-
History, protohistory and prehistory of the Arabidopsis thaliana chromosome complement
-
Henry, Y., Bedhomme, M., and Blanc, G. (2006). History, protohistory and prehistory of the Arabidopsis thaliana chromosome complement. Trends Plant Sci. 11: 267–273.
-
(2006)
Trends Plant Sci
, vol.11
, pp. 267-273
-
-
Henry, Y.1
Bedhomme, M.2
Blanc, G.3
-
45
-
-
84892641918
-
Whole genome and tandem duplicate retention facilitated glucosinolate pathway diversification in the mustard family
-
Hofberger, J.A., Lyons, E., Edger, P.P., Chris Pires, J., and Eric Schranz, M. (2013). Whole genome and tandem duplicate retention facilitated glucosinolate pathway diversification in the mustard family. Genome Biol. Evol. 5: 2155–2173.
-
(2013)
Genome Biol. Evol
, vol.5
, pp. 2155-2173
-
-
Hofberger, J.A.1
Lyons, E.2
Edger, P.P.3
Chris Pires, J.4
Eric Schranz, M.5
-
46
-
-
84964314678
-
Taming the wild: Resolving the gene pools of non-model Arabidopsis lineages. BMC Evol
-
Hohmann, N., Schmickl, R., Chiang, T.-Y., Lu_canová, M., Kolá_r, F., Marhold, K., and Koch, M.A. (2014). Taming the wild: resolving the gene pools of non-model Arabidopsis lineages. BMC Evol. Biol. 14: 224.
-
(2014)
Biol
, vol.14
, pp. 224
-
-
Hohmann, N.1
Schmickl, R.2
Chiang, T.-Y.3
Lu_Canová, M.4
Kolá_R, F.5
Marhold, K.6
Koch, M.A.7
-
47
-
-
84977318711
-
On the structure and origin of major glaciation cycles 2. The 100,000‐year cycle
-
Imbrie, J., et al. (1993). On the structure and origin of major glaciation cycles 2. The 100,000‐year cycle. Paleoceanography 8: 699–735.
-
(1993)
Paleoceanography
, vol.8
, pp. 699-735
-
-
Imbrie, J.1
-
48
-
-
33646890870
-
A unique recent origin of the allotetraploid species Arabidopsis suecica: Evidence from nuclear DNA markers
-
Jakobsson, M., Hagenblad, J., Tavaré, S., Säll, T., Halldén, C., Lind-Halldén, C., and Nordborg, M. (2006). A unique recent origin of the allotetraploid species Arabidopsis suecica: Evidence from nuclear DNA markers. Mol. Biol. Evol. 23: 1217–1231.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 1217-1231
-
-
Jakobsson, M.1
Hagenblad, J.2
Tavaré, S.3
Säll, T.4
Halldén, C.5
Lind-Halldén, C.6
Nordborg, M.7
-
49
-
-
79955630390
-
Ancestral polyploidy in seed plants and angiosperms
-
Jiao, Y., et al. (2011). Ancestral polyploidy in seed plants and angiosperms. Nature 473: 97–100.
-
(2011)
Nature
, vol.473
, pp. 97-100
-
-
Jiao, Y.1
-
50
-
-
84862777561
-
A genome triplication associated with early diversification of the core eudicots
-
Jiao, Y., et al. (2012). A genome triplication associated with early diversification of the core eudicots. Genome Biol. 13: R3.
-
(2012)
Genome Biol
, vol.13
-
-
Jiao, Y.1
-
51
-
-
64749105282
-
A Pleistocene inter-tribal allopolyploidization event precedes the species radiation of Pachycladon (Brassicaceae) in New Zealand
-
Joly, S., Heenan, P.B., and Lockhart, P.J. (2009). A Pleistocene inter-tribal allopolyploidization event precedes the species radiation of Pachycladon (Brassicaceae) in New Zealand. Mol. Phylogenet. Evol. 51: 365–372.
-
(2009)
Mol. Phylogenet. Evol
, vol.51
, pp. 365-372
-
-
Joly, S.1
Heenan, P.B.2
Lockhart, P.J.3
-
52
-
-
85010540226
-
Species richness and polyploid patterns in the genus Draba (Brassicaceae): A first global perspective
-
Jordon-Thaden, I., and Koch, M. (2008). Species richness and polyploid patterns in the genus Draba (Brassicaceae): a first global perspective. Plant Ecol. Divers. 1: 255–263.
-
(2008)
Plant Ecol. Divers
, vol.1
, pp. 255-263
-
-
Jordon-Thaden, I.1
Koch, M.2
-
53
-
-
84885646457
-
Species richness of the globally distributed, arctic–alpine genus Draba L
-
Jordon-Thaden, I.E., Al-Shehbaz, I.A., and Koch, M.A. (2013). Species richness of the globally distributed, arctic–alpine genus Draba L. (Brassicaceae). Alp. Bot. 123: 97–106.
-
(2013)
(Brassicaceae). Alp. Bot
, vol.123
, pp. 97-106
-
-
Jordon-Thaden, I.E.1
Al-Shehbaz, I.A.2
Koch, M.A.3
-
54
-
-
84907301772
-
Polyploid evolution of the Brassicaceae during the Cenozoic era
-
Kagale, S., Robinson, S.J., Nixon, J., Xiao, R., Huebert, T., Condie, J., Kessler, D., Clarke, W.E., Edger, P.P., Links, M.G., Sharpe, A.G., and Parkin, I.A.P. (2014). Polyploid evolution of the Brassicaceae during the Cenozoic era. Plant Cell 26: 2777–2791.
-
(2014)
Plant Cell
, vol.26
, pp. 2777-2791
-
-
Kagale, S.1
Robinson, S.J.2
Nixon, J.3
Xiao, R.4
Huebert, T.5
Condie, J.6
Kessler, D.7
Clarke, W.E.8
Edger, P.P.9
Links, M.G.10
Sharpe, A.G.11
Parkin, I.12
-
55
-
-
84884990659
-
A world-wide perspective on crucifer speciation and evolution: Phylogenetics, biogeography and trait evolution in tribe Arabideae
-
Karl, R., and Koch, M.A. (2013). A world-wide perspective on crucifer speciation and evolution: phylogenetics, biogeography and trait evolution in tribe Arabideae. Ann. Bot. (Lond.) 112: 983–1001.
-
(2013)
Ann. Bot. (Lond.)
, vol.112
, pp. 983-1001
-
-
Karl, R.1
Koch, M.A.2
-
56
-
-
13744252890
-
MAFFT version 5: Improvement in accuracy of multiple sequence alignment
-
Katoh, K., Kuma, K., Toh, H., and Miyata, T. (2005). MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33: 511–518.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 511-518
-
-
Katoh, K.1
Kuma, K.2
Toh, H.3
Miyata, T.4
-
57
-
-
0037100671
-
MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh, K., Misawa, K., Kuma, K., and Miyata, T. (2002). MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30: 3059–3066.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
58
-
-
84942835210
-
Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size
-
Kelly, L.J., et al. (2015). Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. New Phytol. 8: http://dx.doi.org/ 10.1111/nph.13471.
-
(2015)
New Phytol
, vol.8
-
-
Kelly, L.J.1
-
59
-
-
71049172074
-
Boechera or not? Phylogeny and phylogeography of eastern North American Boechera species (Brassicaceae)
-
Kiefer, C., Dobeš, C., and Koch, M.A. (2009a). Boechera or not? Phylogeny and phylogeography of eastern North American Boechera species (Brassicaceae). Taxon 58: 1109–1121.
-
(2009)
Taxon
, vol.58
, pp. 1109-1121
-
-
Kiefer, C.1
Dobeš, C.2
Koch, M.A.3
-
60
-
-
65649094049
-
Phylogeographic structure of the chloroplast DNA gene pool in North American Boechera–a genus and continental-wide perspective
-
Kiefer, C., Dobeš, C., Sharbel, T.F., and Koch, M.A. (2009b). Phylogeographic structure of the chloroplast DNA gene pool in North American Boechera–a genus and continental-wide perspective. Mol. Phylogenet. Evol. 52: 303–311.
-
(2009)
Mol. Phylogenet. Evol
, vol.52
, pp. 303-311
-
-
Kiefer, C.1
Dobeš, C.2
Sharbel, T.F.3
Koch, M.A.4
-
61
-
-
84860997222
-
A continental-wide perspective: The genepool of nuclear encoded ribosomal DNA and single-copy gene sequences in North American Boechera (Brassicaceae)
-
Kiefer, C., and Koch, M.A. (2012). A continental-wide perspective: the genepool of nuclear encoded ribosomal DNA and single-copy gene sequences in North American Boechera (Brassicaceae). PLoS One 7: e36491.
-
(2012)
Plos One
, vol.7
-
-
Kiefer, C.1
Koch, M.A.2
-
62
-
-
84892761987
-
BrassiBase: Introduction to a novel knowledge database on Brassicaceae evolution
-
Kiefer, M., Schmickl, R., German, D.A., Mandáková, T., Lysak, M.A., Al-Shehbaz, I.A., Franzke, A., Mummenhoff, K., Stamatakis, A., and Koch, M.A. (2014). BrassiBase: introduction to a novel knowledge database on Brassicaceae evolution. Plant Cell Physiol. 55: e3.
-
(2014)
Plant Cell Physiol
, vol.55
-
-
Kiefer, M.1
Schmickl, R.2
German, D.A.3
Mandáková, T.4
Lysak, M.A.5
Al-Shehbaz, I.A.6
Franzke, A.7
Mummenhoff, K.8
Stamatakis, A.9
Koch, M.A.10
-
63
-
-
0001704650
-
Monograph of the fruits and seeds in the Cretaceous of Central Europe
-
Knobloch, E.D., and Mai, D.H. (1986). Monograph of the fruits and seeds in the Cretaceous of Central Europe. Rozpravy Ústreõdního Ústavu Geologickéh 47: 1–219.
-
(1986)
Rozpravy Ústreõdního Ústavu Geologickéh
, vol.47
, pp. 1-219
-
-
Knobloch, E.D.1
Mai, D.H.2
-
64
-
-
0036265590
-
Genetic differentiation and speciation in prealpine Cochlearia: Allohexaploid Cochlearia bavarica Vogt (Brassicaceae) compared to its diploid ancestor Cochlearia pyrenaica DC
-
Koch, M. (2002). Genetic differentiation and speciation in prealpine Cochlearia: Allohexaploid Cochlearia bavarica Vogt (Brassicaceae) compared to its diploid ancestor Cochlearia pyrenaica DC. in Germany and Austria. Plant Syst. Evol. 232: 35–49.
-
(2002)
Germany and Austria. Plant Syst. Evol
, vol.232
, pp. 35-49
-
-
Koch, M.1
-
65
-
-
0032694941
-
Molecular systematics and evolution of Arabidopsis and Arabis
-
Koch, M., Bishop, J., and Mitchell-Olds, T. (1999). Molecular systematics and evolution of Arabidopsis and Arabis. Plant Biol. 1: 529–537.
-
(1999)
Plant Biol
, vol.1
, pp. 529-537
-
-
Koch, M.1
Bishop, J.2
Mitchell-Olds, T.3
-
66
-
-
0001692896
-
Molecular systematics of the Brassicaceae: Evidence from coding plastidic matK and nuclear Chs sequences
-
Koch, M., Haubold, B., and Mitchell-Olds, T. (2001). Molecular systematics of the Brassicaceae: evidence from coding plastidic matK and nuclear Chs sequences. Am. J. Bot. 88: 534–544.
-
(2001)
Am. J. Bot
, vol.88
, pp. 534-544
-
-
Koch, M.1
Haubold, B.2
Mitchell-Olds, T.3
-
67
-
-
0031795514
-
Isozymes, speciation and evolution in the polyploid complex Cochlearia L. (Brassicaceae)
-
Koch, M., Huthmann, M., and Hurka, H. (1998). Isozymes, speciation and evolution in the polyploid complex Cochlearia L. (Brassicaceae). Bot. Acta 111: 411–425.
-
(1998)
Bot. Acta
, vol.111
, pp. 411-425
-
-
Koch, M.1
Huthmann, M.2
Hurka, H.3
-
68
-
-
0038613484
-
Molecular systematics, evolution, and population biology in the mustard family (Brassicaceae)
-
Koch, M., Al-Shehbaz, I.A., and Mummenhoff, K. (2003). Molecular systematics, evolution, and population biology in the mustard family (Brassicaceae). Ann. Mo. Bot. Gard. 90: 151–171.
-
(2003)
Ann. Mo. Bot. Gard
, vol.90
, pp. 151-171
-
-
Koch, M.1
Al-Shehbaz, I.A.2
Mummenhoff, K.3
-
69
-
-
84857770562
-
Mid-Miocene divergence of Ionopsidium and Cochlearia and its impact on the systematics and biogeography of the tribe Cochlearieae (Brassicaceae)
-
Koch, M.A. (2012). Mid-Miocene divergence of Ionopsidium and Cochlearia and its impact on the systematics and biogeography of the tribe Cochlearieae (Brassicaceae). Taxon 61: 76–92.
-
(2012)
Taxon
, vol.61
, pp. 76-92
-
-
Koch, M.A.1
-
70
-
-
70450247851
-
Molecular systematics and evolution of “wild” crucifers (Brassicaceae or Cruciferae)
-
S.K. Gupta, ed (Boca Raton, FL: Taylor and Francis Group
-
Koch, M.A., and Al-Shehbaz, I.A. (2009). Molecular systematics and evolution of “wild” crucifers (Brassicaceae or Cruciferae). In Biology and Breeding of Crucifers, S.K. Gupta, ed (Boca Raton, FL: Taylor and Francis Group), pp. 1–19.
-
(2009)
Biology and Breeding of Crucifers
, pp. 1-19
-
-
Koch, M.A.1
Al-Shehbaz, I.A.2
-
71
-
-
33845878532
-
Supernetwork identifies multiple events of plastid trnF(GAA) pseudogene evolution in the Brassicaceae
-
Koch, M.A., Dobeš, C., Kiefer, C., Schmickl, R., Klimes, L., and Lysak, M.A. (2007). Supernetwork identifies multiple events of plastid trnF(GAA) pseudogene evolution in the Brassicaceae. Mol. Biol. Evol. 24: 63–73.
-
(2007)
Mol. Biol. Evol
, vol.24
, pp. 63-73
-
-
Koch, M.A.1
Dobeš, C.2
Kiefer, C.3
Schmickl, R.4
Klimes, L.5
Lysak, M.A.6
-
72
-
-
84888003828
-
Taxonomy and systematics are key to biological information: Arabidopsis, Eutrema (Thellungiella), Noccaea and Schrenkiella (Brassicaceae) as examples
-
Koch, M.A., and German, D.A. (2013). Taxonomy and systematics are key to biological information: Arabidopsis, Eutrema (Thellungiella), Noccaea and Schrenkiella (Brassicaceae) as examples. Front. Plant Sci. 4: 267.
-
(2013)
Front. Plant Sci
, vol.4
, pp. 267
-
-
Koch, M.A.1
German, D.A.2
-
73
-
-
0033804889
-
Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)
-
Koch, M.A., Haubold, B., and Mitchell-Olds, T. (2000). Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae). Mol. Biol. Evol. 17: 1483–1498.
-
(2000)
Mol. Biol. Evol
, vol.17
, pp. 1483-1498
-
-
Koch, M.A.1
Haubold, B.2
Mitchell-Olds, T.3
-
74
-
-
33745905911
-
Molecules and migration: Biogeographical studies in cruciferous plants
-
Koch, M.A., and Kiefer, C. (2006). Molecules and migration: biogeographical studies in cruciferous plants. Plant Syst. Evol. 259: 121–142.
-
(2006)
Plant Syst. Evol
, vol.259
, pp. 121-142
-
-
Koch, M.A.1
Kiefer, C.2
-
75
-
-
84867772275
-
BrassiBase: Tools and biological resources to study characters and traits in the Brassicaceae— version 1.1
-
Koch, M.A., Kiefer, M., German, D.A., Al-Shehbaz, I.A., Franzke, A., Mummenhoff, K., and Schmickl, R. (2012). BrassiBase: Tools and biological resources to study characters and traits in the Brassicaceae— version 1.1. Taxon 61: 1001–1009.
-
(2012)
Taxon
, vol.61
, pp. 1001-1009
-
-
Koch, M.A.1
Kiefer, M.2
German, D.A.3
Al-Shehbaz, I.A.4
Franzke, A.5
Mummenhoff, K.6
Schmickl, R.7
-
76
-
-
34547538793
-
Evolution and genetic differentiation among relatives of Arabidopsis thaliana
-
Koch, M.A., and Matschinger, M. (2007). Evolution and genetic differentiation among relatives of Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 104: 6272–6277.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 6272-6277
-
-
Koch, M.A.1
Matschinger, M.2
-
77
-
-
52249099009
-
Arabidopsis thaliana’s wild relatives: An updated overview on systematics, taxonomy and evolution
-
Koch, M.A., Wernisch, M., and Schmickl, R. (2008). Arabidopsis thaliana’s wild relatives: an updated overview on systematics, taxonomy and evolution. Taxon 57: 933.
-
(2008)
Taxon
, vol.57
, pp. 933
-
-
Koch, M.A.1
Wernisch, M.2
Schmickl, R.3
-
78
-
-
84900407539
-
Selecting optimal partitioning schemes for phylogenomic datasets
-
Lanfear, R., Calcott, B., Kainer, D., Mayer, C., and Stamatakis, A. (2014). Selecting optimal partitioning schemes for phylogenomic datasets. BMC Evol. Biol. 14: 82.
-
(2014)
BMC Evol. Biol
, vol.14
, pp. 82
-
-
Lanfear, R.1
Calcott, B.2
Kainer, D.3
Mayer, C.4
Stamatakis, A.5
-
79
-
-
84861380450
-
Partitionfinder: Combined selection of partitioning schemes and substitution models for phylogenetic analyses
-
Lanfear, R., Calcott, B., Ho, S.Y., and Guindon, S. (2012). Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol. Biol. Evol. 29: 1695–1701.
-
(2012)
Mol. Biol. Evol
, vol.29
, pp. 1695-1701
-
-
Lanfear, R.1
Calcott, B.2
Ho, S.Y.3
Guindon, S.4
-
80
-
-
35448997317
-
Genome size and its uses: The impact of flow cytometry
-
J. Dolezěl, J. Greilhuber, and J. Suda, eds (Weinheim, Germany: Wiley- VCH Verlag
-
Leitch, I.J., and Bennett, M.D. (2007). Genome size and its uses: the impact of flow cytometry. In Flow Cytometry with Plant Cells, J. Dolezěl, J. Greilhuber, and J. Suda, eds (Weinheim, Germany: Wiley- VCH Verlag), pp. 153–176.
-
(2007)
Flow Cytometry with Plant Cells
, pp. 153-176
-
-
Leitch, I.J.1
Bennett, M.D.2
-
82
-
-
42549129942
-
Genomic plasticity and the diversity of polyploid plants
-
Leitch, A.R., and Leitch, I.J. (2008). Genomic plasticity and the diversity of polyploid plants. Science 320: 481–483.
-
(2008)
Science
, vol.320
, pp. 481-483
-
-
Leitch, A.R.1
Leitch, I.J.2
-
83
-
-
34547662934
-
Sequence of events leading to near-complete genome turnover in allopolyploid Nicotiana within five million years
-
Lim, K.Y., Kovarik, A., Matyasek, R., Chase, M.W., Clarkson, J.J., Grandbastien, M.A., and Leitch, A.R. (2007). Sequence of events leading to near-complete genome turnover in allopolyploid Nicotiana within five million years. New Phytol. 175: 756–763.
-
(2007)
New Phytol
, vol.175
, pp. 756-763
-
-
Lim, K.Y.1
Kovarik, A.2
Matyasek, R.3
Chase, M.W.4
Clarkson, J.J.5
Grandbastien, M.A.6
Leitch, A.R.7
-
84
-
-
33645508488
-
Mechanisms of chromosome number reduction in Arabidopsis thaliana and related Brassicaceae species
-
Lysak, M.A., Berr, A., Pecinka, A., Schmidt, R., McBreen, K., and Schubert, I. (2006). Mechanisms of chromosome number reduction in Arabidopsis thaliana and related Brassicaceae species. Proc. Natl. Acad. Sci. USA 103: 5224–5229.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 5224-5229
-
-
Lysak, M.A.1
Berr, A.2
Pecinka, A.3
Schmidt, R.4
McBreen, K.5
Schubert, I.6
-
85
-
-
80052271831
-
Phylogeny, genome, and karyotype evolution of crucifers (Brassicaceae)
-
R. Schmidt and I. Bancroft, eds (New York: Springer
-
Lysak, M.A., and Koch, M.A. (2011). Phylogeny, genome, and karyotype evolution of crucifers (Brassicaceae). In Genetics and Genomics of the Brassicaceae, R. Schmidt and I. Bancroft, eds (New York: Springer), pp. 1–31.
-
(2011)
Genetics and Genomics of the Brassicaceae
, pp. 1-31
-
-
Lysak, M.A.1
Koch, M.A.2
-
86
-
-
57849109041
-
The dynamic ups and downs of genome size evolution in Brassicaceae
-
Lysak, M.A., Koch, M.A., Beaulieu, J.M., Meister, A., and Leitch, I.J. (2009). The dynamic ups and downs of genome size evolution in Brassicaceae. Mol. Biol. Evol. 26: 85–98.
-
(2009)
Mol. Biol. Evol
, vol.26
, pp. 85-98
-
-
Lysak, M.A.1
Koch, M.A.2
Beaulieu, J.M.3
Meister, A.4
Leitch, I.J.5
-
87
-
-
17844379449
-
Chromosome triplication found across the tribe Brassiceae
-
Lysak, M.A., Koch, M.A., Pecinka, A., and Schubert, I. (2005). Chromosome triplication found across the tribe Brassiceae. Genome Res. 15: 516–525.
-
(2005)
Genome Res
, vol.15
, pp. 516-525
-
-
Lysak, M.A.1
Koch, M.A.2
Pecinka, A.3
Schubert, I.4
-
88
-
-
84931563545
-
A metacalibrated time‐tree documents the early rise of flowering plant phylogenetic diversity
-
Magallón, S., Gómez-Acevedo, S., Sánchez-Reyes, L.L., and Herná ndez-Hernández, T. (2015). A metacalibrated time‐tree documents the early rise of flowering plant phylogenetic diversity. New Phytol. 207: 437–453.
-
(2015)
New Phytol
, vol.207
, pp. 437-453
-
-
Magallón, S.1
Gómez-Acevedo, S.2
Sánchez-Reyes, L.L.3
Herná Ndez-Hernández, T.4
-
89
-
-
78650972750
-
Island species radiation and karyotypic stasis in Pachycladon allopolyploids
-
Mandáková, T., Heenan, P.B., and Lysak, M.A. (2010b). Island species radiation and karyotypic stasis in Pachycladon allopolyploids. BMC Evol. Biol. 10: 367.
-
(2010)
BMC Evol. Biol
, vol.10
, pp. 367
-
-
Mandáková, T.1
Heenan, P.B.2
Lysak, M.A.3
-
90
-
-
77956810194
-
Fast diploidization in close mesopolyploid relatives of Arabidopsis
-
Mandáková, T., Joly, S., Krzywinski, M., Mummenhoff, K., and Lysak, M.A. (2010a). Fast diploidization in close mesopolyploid relatives of Arabidopsis. Plant Cell 22: 2277–2290.
-
(2010)
Plant Cell
, vol.22
, pp. 2277-2290
-
-
Mandáková, T.1
Joly, S.2
Krzywinski, M.3
Mummenhoff, K.4
Lysak, M.A.5
-
91
-
-
57749089666
-
Chromosomal phylogeny and karyotype evolution in x57 crucifer species (Brassicaceae)
-
Mandáková, T., and Lysak, M.A. (2008). Chromosomal phylogeny and karyotype evolution in x57 crucifer species (Brassicaceae). Plant Cell 20: 2559–2570.
-
(2008)
Plant Cell
, vol.20
, pp. 2559-2570
-
-
Mandáková, T.1
Lysak, M.A.2
-
92
-
-
84867821440
-
Whole-genome triplication and species radiation in the southern African tribe Heliophileae (Brassicaceae)
-
Mandáková, T., Mummenhoff, K., Al-Shehbaz, I.A., Mucina, L., Mühlhausen, A., and Lysak, M.A. (2012). Whole-genome triplication and species radiation in the southern African tribe Heliophileae (Brassicaceae). Taxon 61: 989–1000.
-
(2012)
Taxon
, vol.61
, pp. 989-1000
-
-
Mandáková, T.1
Mummenhoff, K.2
Al-Shehbaz, I.A.3
Mucina, L.4
Mühlhausen, A.5
Lysak, M.A.6
-
93
-
-
84930033160
-
Karyotype evolution in apomictic Boechera and the origin of the aberrant chromosomes
-
Mandáková, T., Schranz, M.E., Sharbel, T.F., de Jong, H., and Lysak, M.A. (2015). Karyotype evolution in apomictic Boechera and the origin of the aberrant chromosomes. Plant J. 82: 785–793.
-
(2015)
Plant J
, vol.82
, pp. 785-793
-
-
Mandáková, T.1
Schranz, M.E.2
Sharbel, T.F.3
De Jong, H.4
Lysak, M.A.5
-
94
-
-
84928966754
-
Hybrid apomicts trapped in the ecological niches of their sexual ancestors
-
Mau, M., Lovell, J.T., Corral, J.M., Kiefer, C., Koch, M.A., Aliyu O.M., McKay J., and Sharbel, T.F. (2015). Hybrid apomicts trapped in the ecological niches of their sexual ancestors. Proc. Natl. Acad. Sci. USA 112: E2357–E2365.
-
(2015)
Proc. Natl. Acad. Sci. USA
, vol.112
, pp. E2357-E2365
-
-
Mau, M.1
Lovell, J.T.2
Corral, J.M.3
Kiefer, C.4
Koch, M.A.5
Aliyu, O.M.6
McKay, J.7
Sharbel, T.F.8
-
95
-
-
80052468970
-
Recently formed polyploid plants diversify at lower rates
-
Mayrose, I., Zhan, S.H., Rothfels, C.J., Magnuson-Ford, K., Barker, M.S., Rieseberg, L.H., and Otto, S.P. (2011). Recently formed polyploid plants diversify at lower rates. Science 333: 1257.
-
(2011)
Science
, vol.333
, pp. 1257
-
-
Mayrose, I.1
Zhan, S.H.2
Rothfels, C.J.3
Magnuson-Ford, K.4
Barker, M.S.5
Rieseberg, L.H.6
Otto, S.P.7
-
96
-
-
42949157236
-
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
-
Ming, R., et al. (2008). The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature 452: 991–996.
-
(2008)
Nature
, vol.452
, pp. 991-996
-
-
Ming, R.1
-
97
-
-
77949494249
-
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
-
Moore, M.J., Soltis, P.S., Bell, C.D., Burleigh, J.G., and Soltis, D.E. (2010). Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots. Proc. Natl. Acad. Sci. USA 107: 4623–4628.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 4623-4628
-
-
Moore, M.J.1
Soltis, P.S.2
Bell, C.D.3
Burleigh, J.G.4
Soltis, D.E.5
-
98
-
-
0031415844
-
Molecular data reveal convergence in fruit characters used in the classification of Thlaspi s.L. (Brassicaceae)
-
Mummenhoff, K., Franzke, A., and Koch, M. (1997). Molecular data reveal convergence in fruit characters used in the classification of Thlaspi s.l. (Brassicaceae). Bot. J. Linn. Soc. 125: 183–199.
-
(1997)
Bot. J. Linn. Soc
, vol.125
, pp. 183-199
-
-
Mummenhoff, K.1
Franzke, A.2
Koch, M.3
-
99
-
-
67650208219
-
Lepidium as a model system for studying the evolution of fruit development in Brassicaceae
-
Mummenhoff, K., Polster, A., Mühlhausen, A., and Theissen, G. (2009). Lepidium as a model system for studying the evolution of fruit development in Brassicaceae. J. Exp. Bot. 60: 1503–1513.
-
(2009)
J. Exp. Bot
, vol.60
, pp. 1503-1513
-
-
Mummenhoff, K.1
Polster, A.2
Mühlhausen, A.3
Theissen, G.4
-
100
-
-
31644438764
-
-
Müller, K., Quandt, D., Müller, J., and Neinhuis, C. (2010). PhyDE, Version 0.9971: Phylogenetic Data Editor. Available at http://www.phyde.de.
-
(2010)
Phyde, Version 0.9971: Phylogenetic Data Editor
-
-
Müller, K.1
Quandt, D.2
Müller, J.3
Neinhuis, C.4
-
101
-
-
84870237757
-
Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing
-
Njuguna, W., Liston, A., Cronn, R., Ashman, T.-L., and Bassil, N. (2013). Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing. Mol. Phylogenet. Evol. 66: 17–29.
-
(2013)
Mol. Phylogenet. Evol
, vol.66
, pp. 17-29
-
-
Njuguna, W.1
Liston, A.2
Cronn, R.3
Ashman, T.-L.4
Bassil, N.5
-
102
-
-
1042304216
-
APE: Analyses of phylogenetics and evolution in R language
-
Paradis, E., Claude, J., and Strimmer, K. (2004). APE: analyses of phylogenetics and evolution in R language. Bioinformatics 20: 289–290.
-
(2004)
Bioinformatics
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
103
-
-
84856512596
-
Nuclear and chloroplast DNA phylogeography reveals vicariance among European populations of the model species for the study of metal tolerance, Arabidopsis halleri (Brassicaceae)
-
Pauwels, M., Vekemans, X., Godé, C., Frérot, H., Castric, V., and Saumitou-Laprade, P. (2012). Nuclear and chloroplast DNA phylogeography reveals vicariance among European populations of the model species for the study of metal tolerance, Arabidopsis halleri (Brassicaceae). New Phytol. 193: 916–928.
-
(2012)
New Phytol
, vol.193
, pp. 916-928
-
-
Pauwels, M.1
Vekemans, X.2
Godé, C.3
Frérot, H.4
Castric, V.5
Saumitou-Laprade, P.6
-
104
-
-
84858212200
-
Does speciation between Arabidopsis halleri and Arabidopsis lyrata coincide with major changes in a molecular target of adaptation?
-
Roux, C., Castric, V., Pauwels, M., Wright, S.I., Saumitou-Laprade, P., and Vekemans, X. (2011). Does speciation between Arabidopsis halleri and Arabidopsis lyrata coincide with major changes in a molecular target of adaptation? PLoS One 6: e26872.
-
(2011)
Plos One
, vol.6
-
-
Roux, C.1
Castric, V.2
Pauwels, M.3
Wright, S.I.4
Saumitou-Laprade, P.5
Vekemans, X.6
-
105
-
-
0033377211
-
Mediterranean and Paratethys. Facts and hypotheses of an Oligocene to Miocene paleogeography (short overview)
-
Rögl, F. (1999). Mediterranean and Paratethys. Facts and hypotheses of an Oligocene to Miocene paleogeography (short overview). Geologica Carpathica 50: 339–349.
-
(1999)
Geologica Carpathica
, vol.50
, pp. 339-349
-
-
Rögl, F.1
-
106
-
-
84897584050
-
From algae to angiosperms-inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes
-
Ruhfel, B.R., Gitzendanner, M.A., Soltis, P.S., Soltis, D.E., and Burleigh, J.G. (2014). From algae to angiosperms-inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes. BMC Evol. Biol. 14: 23.
-
(2014)
BMC Evol. Biol
, vol.14
, pp. 23
-
-
Ruhfel, B.R.1
Gitzendanner, M.A.2
Soltis, P.S.3
Soltis, D.E.4
Burleigh, J.G.5
-
107
-
-
77950664138
-
The evolutionary history of the Arabidopsis lyrata complex: A hybrid in the amphi-Beringian area closes a large distribution gap and builds up a genetic barrier
-
Schmickl, R., Jørgensen, M.H., Brysting, A.K., and Koch, M.A. (2010). The evolutionary history of the Arabidopsis lyrata complex: a hybrid in the amphi-Beringian area closes a large distribution gap and builds up a genetic barrier. BMC Evol. Biol. 10: 98.
-
(2010)
BMC Evol. Biol
, vol.10
, pp. 98
-
-
Schmickl, R.1
Jørgensen, M.H.2
Brysting, A.K.3
Koch, M.A.4
-
108
-
-
84864561203
-
The evolutionary history of the Arabidopsis arenosa complex: Diverse tetraploids mask the Western Carpathian center of species and genetic diversity
-
Schmickl, R., Paule, J., Klein, J., Marhold, K., and Koch, M.A. (2012). The evolutionary history of the Arabidopsis arenosa complex: diverse tetraploids mask the Western Carpathian center of species and genetic diversity. PLoS One 7: e42691.
-
(2012)
Plos One
, vol.7
-
-
Schmickl, R.1
Paule, J.2
Klein, J.3
Marhold, K.4
Koch, M.A.5
-
109
-
-
33751014556
-
The ABC’s of comparative genomics in the Brassicaceae: Building blocks of crucifer genomes
-
Schranz, M.E., Lysak, M.A., and Mitchell-Olds, T. (2006). The ABC’s of comparative genomics in the Brassicaceae: building blocks of crucifer genomes. Trends Plant Sci. 11: 535–542.
-
(2006)
Trends Plant Sci
, vol.11
, pp. 535-542
-
-
Schranz, M.E.1
Lysak, M.A.2
Mitchell-Olds, T.3
-
110
-
-
33745478966
-
Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae
-
Schranz, M.E., and Mitchell-Olds, T. (2006). Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae. Plant Cell 18: 1152–1165.
-
(2006)
Plant Cell
, vol.18
, pp. 1152-1165
-
-
Schranz, M.E.1
Mitchell-Olds, T.2
-
111
-
-
84859917501
-
Ancient whole genome duplications, novelty and diversification: The WGD Radiation Lag-Time Model
-
Schranz, M.E., Mohammadin, S., and Edger, P.P. (2012). Ancient whole genome duplications, novelty and diversification: the WGD Radiation Lag-Time Model. Curr. Opin. Plant Biol. 15: 147–153.
-
(2012)
Curr. Opin. Plant Biol
, vol.15
, pp. 147-153
-
-
Schranz, M.E.1
Mohammadin, S.2
Edger, P.P.3
-
112
-
-
0032829403
-
Fossil flowers with Normapolles pollen from the Upper Cretaceous of southeastern North America
-
Sims, H.J., Herendeen, P.S., Lupia, R., Christopher, R.A., and Crane, P.R. (1999). Fossil flowers with Normapolles pollen from the Upper Cretaceous of southeastern North America. Rev. Palaeobot. Palynol. 106: 131–151.
-
(1999)
Rev. Palaeobot. Palynol
, vol.106
, pp. 131-151
-
-
Sims, H.J.1
Herendeen, P.S.2
Lupia, R.3
Christopher, R.A.4
Crane, P.R.5
-
113
-
-
60249085527
-
Polyploidy and angiosperm diversification
-
Soltis, D.E., Albert, V.A., Leebens-Mack, J., Bell, C.D., Paterson, A.H., Zheng, C., Sankoff, D., Depamphilis, C.W., Wall, P.K., and Soltis, P.S. (2009). Polyploidy and angiosperm diversification. Am. J. Bot. 96: 336–348.
-
(2009)
Am. J. Bot
, vol.96
, pp. 336-348
-
-
Soltis, D.E.1
Albert, V.A.2
Leebens-Mack, J.3
Bell, C.D.4
Paterson, A.H.5
Zheng, C.6
Sankoff, D.7
Depamphilis, C.W.8
Wall, P.K.9
Soltis, P.S.10
-
114
-
-
84902966694
-
Polyploidy and novelty: Gottlieb’s legacy
-
Soltis, P.S., Liu, X., Marchant, D.B., Visger, C.J., and Soltis, D.E. (2014). Polyploidy and novelty: Gottlieb’s legacy. Philos. Trans. R. Soc. Lond. B Biol. Sci. 369: 20130351.
-
(2014)
Philos. Trans. R. Soc. Lond. B Biol. Sci
, vol.369
, pp. 20130351
-
-
Soltis, P.S.1
Liu, X.2
Marchant, D.B.3
Visger, C.J.4
Soltis, D.E.5
-
115
-
-
33947673002
-
Autopolyploidy in angiosperms: Have we grossly underestimated the number of species?
-
Soltis, D.E., Soltis, P.S., Schemske, D.W., Hancock, J.F., Thompson, J.N., Husband, B.C., and Judd, W.S. (2007). Autopolyploidy in angiosperms: have we grossly underestimated the number of species? Taxon 56: 13–30.
-
(2007)
Taxon
, vol.56
, pp. 13-30
-
-
Soltis, D.E.1
Soltis, P.S.2
Schemske, D.W.3
Hancock, J.F.4
Thompson, J.N.5
Husband, B.C.6
Judd, W.S.7
-
116
-
-
0347388384
-
Advances in the study of polyploidy since plant speciation
-
Soltis, D.E., Soltis, P.S., and Tate, J.A. (2004). Advances in the study of polyploidy since plant speciation. New Phytol. 161: 173–191.
-
(2004)
New Phytol
, vol.161
, pp. 173-191
-
-
Soltis, D.E.1
Soltis, P.S.2
Tate, J.A.3
-
117
-
-
84899553363
-
RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies
-
Stamatakis, A. (2014). RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312–1313.
-
(2014)
Bioinformatics
, vol.30
, pp. 1312-1313
-
-
Stamatakis, A.1
-
118
-
-
0000357588
-
Cytological characteristics associated with the different growth habits in the dicotyledons
-
Stebbins, G.L., Jr. (1938). Cytological characteristics associated with the different growth habits in the dicotyledons. Am. J. Bot. 25: 189–198.
-
(1938)
Am. J. Bot
, vol.25
, pp. 189-198
-
-
Stebbins, G.L.1
-
121
-
-
0032747976
-
Esgueiria futabensis sp. Nov. A new angiosperm flower from the Upper Cretaceous (Lower Coniacian) of northeastern Honshu Japan
-
Takahashi, M., Crane, P.R., and Ando, H. (1999). Esgueiria futabensis sp. nov., a new angiosperm flower from the Upper Cretaceous (Lower Coniacian) of northeastern Honshu, Japan. Paleontological Research 3: 81–87.
-
(1999)
Paleontological Research
, vol.3
, pp. 81-87
-
-
Takahashi, M.1
Crane, P.R.2
Ando, H.3
-
122
-
-
76249106402
-
Angiosperm genome comparisons reveal early polyploidy in the monocot lineage
-
Tang, H., Bowers, J.E., Wang, X., and Paterson, A.H. (2010). Angiosperm genome comparisons reveal early polyploidy in the monocot lineage. Proc. Natl. Acad. Sci. USA 107: 472–477.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 472-477
-
-
Tang, H.1
Bowers, J.E.2
Wang, X.3
Paterson, A.H.4
-
123
-
-
84931574165
-
Nested radiations and the pulse of angiosperm diversification: Increased diversification rates often follow whole genome duplications
-
Tank, D.C., Eastman, J.M., Pennell, M.W., Soltis, P.S., Soltis, D.E., Hinchliff, C.E., Brown, J.W., Sessa, E.B., and Harmon, L.J. (2015). Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications. New Phytol. 207: 454–467.
-
(2015)
New Phytol
, vol.207
, pp. 454-467
-
-
Tank, D.C.1
Eastman, J.M.2
Pennell, M.W.3
Soltis, P.S.4
Soltis, D.E.5
Hinchliff, C.E.6
Brown, J.W.7
Sessa, E.B.8
Harmon, L.J.9
-
124
-
-
32344444818
-
Ecological differentiation of Mediterranean endemic plants
-
Thompson, J.D., Lavergne, S., Affre, L., Gaudeul, M., and Debussche, M. (2005). Ecological differentiation of Mediterranean endemic plants. Taxon 54: 967–976.
-
(2005)
Taxon
, vol.54
, pp. 967-976
-
-
Thompson, J.D.1
Lavergne, S.2
Affre, L.3
Gaudeul, M.4
Debussche, M.5
-
125
-
-
84864584467
-
Recent loss of self-incompatibility by degradation of the male component in allotetraploid Arabidopsis kamchatica
-
Tsuchimatsu, T., Kaiser, P., Yew, C.-L., Bachelier, J.B., and Shimizu, K.K. (2012). Recent loss of self-incompatibility by degradation of the male component in allotetraploid Arabidopsis kamchatica. PLoS Genet. 8: e1002838.
-
(2012)
Plos Genet
, vol.8
-
-
Tsuchimatsu, T.1
Kaiser, P.2
Yew, C.-L.3
Bachelier, J.B.4
Shimizu, K.K.5
-
126
-
-
84902983212
-
Tangled up in two: A burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution
-
Vanneste, K., Maere, S., and Van de Peer, Y. (2014). Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution. Philos. Trans. R. Soc. Lond. B Biol. Sci. 369: 20130353.
-
(2014)
Philos. Trans. R. Soc. Lond. B Biol. Sci
, vol.369
, pp. 20130353
-
-
Vanneste, K.1
Maere, S.2
Van De Peer, Y.3
-
127
-
-
77957560949
-
The genome of the domesticated apple (Malus 3 domestica Borkh.)
-
Velasco, R., et al. (2010). The genome of the domesticated apple (Malus 3 domestica Borkh.). Nat. Genet. 42: 833–839.
-
(2010)
Nat. Genet
, vol.42
, pp. 833-839
-
-
Velasco, R.1
-
128
-
-
0034671866
-
The origins of genomic duplications in Arabidopsis
-
Vision, T.J., Brown, D.G., and Tanksley, S.D. (2000). The origins of genomic duplications in Arabidopsis. Science 290: 2114–2117.
-
(2000)
Science
, vol.290
, pp. 2114-2117
-
-
Vision, T.J.1
Brown, D.G.2
Tanksley, S.D.3
-
129
-
-
80053386792
-
Brassica rapa Genome Sequencing Project Consortium (2011). The genome of the mesopolyploid crop species Brassica rapa
-
Wang, X., et al.; Brassica rapa Genome Sequencing Project Consortium (2011). The genome of the mesopolyploid crop species Brassica rapa. Nat. Genet. 43: 1035–1039.
-
Nat. Genet
, vol.43
, pp. 1035-1039
-
-
Wang, X.1
-
130
-
-
33748269264
-
The distribution of species diversity across a flora’s component lineages: Dating the Cape’s ‘relicts’
-
Warren, B.H., and Hawkins, J.A. (2006). The distribution of species diversity across a flora’s component lineages: dating the Cape’s ‘relicts’. Proc. Biol. Sci. 273: 2149–2158.
-
(2006)
Proc. Biol. Sci
, vol.273
, pp. 2149-2158
-
-
Warren, B.H.1
Hawkins, J.A.2
-
131
-
-
33745902198
-
Brassicaceae: Chromosome number index and database on CD-Rom
-
Warwick, S.I., and Al-Shehbaz, I.A. (2006). Brassicaceae: Chromosome number index and database on CD-Rom. Plant Syst. Evol. 259: 237–248.
-
(2006)
Plant Syst. Evol
, vol.259
, pp. 237-248
-
-
Warwick, S.I.1
Al-Shehbaz, I.A.2
-
132
-
-
77952280362
-
Closing the gaps: Phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region
-
Warwick, S.I., Mummenhoff, K., Sauder, C., Koch, M.A., and Al- Shehbaz, I.A. (2010). Closing the gaps: Phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region. Plant Syst. Evol. 285: 209–232.
-
(2010)
Plant Syst. Evol
, vol.285
, pp. 209-232
-
-
Warwick, S.I.1
Mummenhoff, K.2
Sauder, C.3
Koch, M.A.4
Al- Shehbaz, I.A.5
-
133
-
-
31944437603
-
Genome size evolution in holoparasitic Orobanche (Orobanchaceae) and related genera
-
Weiss-Schneeweiss, H., Greilhuber, J., and Schneeweiss, G.M. (2006). Genome size evolution in holoparasitic Orobanche (Orobanchaceae) and related genera. Am. J. Bot. 93: 148–156.
-
(2006)
Am. J. Bot
, vol.93
, pp. 148-156
-
-
Weiss-Schneeweiss, H.1
Greilhuber, J.2
Schneeweiss, G.M.3
-
134
-
-
38049170530
-
The genetic basis of a plant-insect coevolutionary key innovation
-
Wheat, C.W., Vogel, H., Wittstock, U., Braby, M.F., Underwood, D., and Mitchell-Olds, T. (2007). The genetic basis of a plant-insect coevolutionary key innovation. Proc. Natl. Acad. Sci. USA 104: 20427–20431.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 20427-20431
-
-
Wheat, C.W.1
Vogel, H.2
Wittstock, U.3
Braby, M.F.4
Underwood, D.5
Mitchell-Olds, T.6
-
135
-
-
0001203857
-
Eocene and Oligocene floras and vegetation of the Rocky Mountains
-
Wing, S.L. (1987). Eocene and Oligocene floras and vegetation of the Rocky Mountains. Ann. Mo. Bot. Gard. 74: 748–784.
-
(1987)
Ann. Mo. Bot. Gard
, vol.74
, pp. 748-784
-
-
Wing, S.L.1
-
136
-
-
84893200495
-
Genome survey sequencing provides clues into glucosinolate biosynthesis and flowering pathway evolution in allotetraploid Brassica juncea
-
Yang, J., Song, N., Zhao, X., Qi, X., Hu, Z., and Zhang, M. (2014). Genome survey sequencing provides clues into glucosinolate biosynthesis and flowering pathway evolution in allotetraploid Brassica juncea. BMC Genomics 15: e107.
-
(2014)
BMC Genomics
, vol.15
-
-
Yang, J.1
Song, N.2
Zhao, X.3
Qi, X.4
Hu, Z.5
Zhang, M.6
|