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Volumn 52, Issue 2, 2009, Pages 303-311

Phylogeographic structure of the chloroplast DNA gene pool in North American Boechera - A genus and continental-wide perspective

Author keywords

Boechera; Brassicaceae; cpDNA; Hybridisation; Phylogeography

Indexed keywords

CHLOROPLAST DNA; PLANT DNA;

EID: 65649094049     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2009.03.016     Document Type: Article
Times cited : (50)

References (47)
  • 1
    • 65649143313 scopus 로고    scopus 로고
    • Al-Shehbaz, I.A., forthcoming. Treatments Under Review and Editing Boechera A. Löwe and D. Löwe. In: Flora of North America Editorial Committee (Eds.), Flora of North America North of Mexico, 7. New York and Oxford.
    • Al-Shehbaz, I.A., forthcoming. Treatments Under Review and Editing) Boechera A. Löwe and D. Löwe. In: Flora of North America Editorial Committee (Eds.), Flora of North America North of Mexico, vol. 7. New York and Oxford.
  • 4
    • 0031979043 scopus 로고    scopus 로고
    • The history and purview of phylogeography: a personal reflection
    • Avise J.C. The history and purview of phylogeography: a personal reflection. Mol. Ecol. 7 (1998) 371-379
    • (1998) Mol. Ecol. , vol.7 , pp. 371-379
    • Avise, J.C.1
  • 5
    • 7044269640 scopus 로고    scopus 로고
    • Molecular evidence for Pleistocene glacial cycles driving diversification of a North American desert spider, Agelenopsis aperta
    • Ayoub N.A., and Riechert S. Molecular evidence for Pleistocene glacial cycles driving diversification of a North American desert spider, Agelenopsis aperta. Mol. Ecol. 13 (2004) 3453-3465
    • (2004) Mol. Ecol. , vol.13 , pp. 3453-3465
    • Ayoub, N.A.1    Riechert, S.2
  • 7
    • 33750975659 scopus 로고    scopus 로고
    • A chloroplast genealogy of myrmecophytic Macaranga species (Euphorbiaceae) in Southeast Asia reveals hybridization, vicariance and long-distance dispersal
    • Bänfer G., Moog U., Fiala B., Mohamed M., Weising K., and Blattner F.R. A chloroplast genealogy of myrmecophytic Macaranga species (Euphorbiaceae) in Southeast Asia reveals hybridization, vicariance and long-distance dispersal. Mol. Ecol. 15 (2006) 4409-4425
    • (2006) Mol. Ecol. , vol.15 , pp. 4409-4425
    • Bänfer, G.1    Moog, U.2    Fiala, B.3    Mohamed, M.4    Weising, K.5    Blattner, F.R.6
  • 8
    • 34147158714 scopus 로고    scopus 로고
    • Insights into the biogeography of the Pacific Northwest North America: evidence from the phylogeography of Salix melanopsis
    • Brunsfeld S.J., Miller T.R., and Carstens B.C. Insights into the biogeography of the Pacific Northwest North America: evidence from the phylogeography of Salix melanopsis. Syst. Botany 32 (2007) 129-139
    • (2007) Syst. Botany , vol.32 , pp. 129-139
    • Brunsfeld, S.J.1    Miller, T.R.2    Carstens, B.C.3
  • 9
    • 33344479237 scopus 로고    scopus 로고
    • A multi-compartmented glacial refugium in the northern Rocky Mountains: evidence from the phylogeography of Cardamine constancei (Brassicaceae)
    • Brunsfeld S.J., and Sullivan J. A multi-compartmented glacial refugium in the northern Rocky Mountains: evidence from the phylogeography of Cardamine constancei (Brassicaceae). Cons. Gen. 6 (2005) 895-904
    • (2005) Cons. Gen. , vol.6 , pp. 895-904
    • Brunsfeld, S.J.1    Sullivan, J.2
  • 10
    • 0038138131 scopus 로고    scopus 로고
    • Patterns of molecular evolution and diversification in a biodiversity hotspot: the California Floristic Province
    • Calsbeek R., Thompson J.N., and Richardson J.E. Patterns of molecular evolution and diversification in a biodiversity hotspot: the California Floristic Province. Mol. Ecol. 12 (2003) 1021-1029
    • (2003) Mol. Ecol. , vol.12 , pp. 1021-1029
    • Calsbeek, R.1    Thompson, J.N.2    Richardson, J.E.3
  • 11
    • 0033771358 scopus 로고    scopus 로고
    • TCS: a computer program to estimate gene genealogies
    • Clement M., Posada D., and Crandall K.A. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9 (2000) 1657-1660
    • (2000) Mol. Ecol. , vol.9 , pp. 1657-1660
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 12
    • 0942267960 scopus 로고    scopus 로고
    • Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. X divaricarpa, and A. holboellii (Brassicaceae)
    • Dobeš C.H., Mitchell-Olds T., and Koch M.A. Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. X divaricarpa, and A. holboellii (Brassicaceae). Mol. Ecol. 13 (2004) 349-370
    • (2004) Mol. Ecol. , vol.13 , pp. 349-370
    • Dobeš, C.H.1    Mitchell-Olds, T.2    Koch, M.A.3
  • 13
    • 27544453714 scopus 로고    scopus 로고
    • Intraspecific diversification in North American Boechera stricta (= Arabis drummondii), Boechera x divaricarpa, and Boechera holboellii (Brassicaceae) inferred from nuclear and chloroplast molecular markers - an integrative approach
    • Dobeš C.H., Koch M.A., and Mitchell-Olds T. Intraspecific diversification in North American Boechera stricta (= Arabis drummondii), Boechera x divaricarpa, and Boechera holboellii (Brassicaceae) inferred from nuclear and chloroplast molecular markers - an integrative approach. Am. J. Bot. 91 (2004) 2087-2101
    • (2004) Am. J. Bot. , vol.91 , pp. 2087-2101
    • Dobeš, C.H.1    Koch, M.A.2    Mitchell-Olds, T.3
  • 14
    • 33745222151 scopus 로고    scopus 로고
    • Embryology, karyology, and modes of reproduction in North American genus Boechera (Brassicaceae): a compilation of seven decades of research
    • Dobeš C., Koch M.A., and Sharbel T. Embryology, karyology, and modes of reproduction in North American genus Boechera (Brassicaceae): a compilation of seven decades of research. Ann. Miss. Bot. Gard. 93 (2006) 517-533
    • (2006) Ann. Miss. Bot. Gard. , vol.93 , pp. 517-533
    • Dobeš, C.1    Koch, M.A.2    Sharbel, T.3
  • 15
    • 52249083414 scopus 로고    scopus 로고
    • TrnF pseudogenes in North American genus Boechera (Brassicaceae): mechanistic aspects of evolution
    • Dobeš C., Kiefer C., Kiefer M., and Koch M.A. TrnF pseudogenes in North American genus Boechera (Brassicaceae): mechanistic aspects of evolution. Plant Biol. 9 (2007) 1-14
    • (2007) Plant Biol. , vol.9 , pp. 1-14
    • Dobeš, C.1    Kiefer, C.2    Kiefer, M.3    Koch, M.A.4
  • 16
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin (version 3.0): an integrated software for population genetics data analysis
    • Excoffier L., Laval G., and Schneider S. Arlequin (version 3.0): an integrated software for population genetics data analysis. Evol. Bioinform. Online 1 (2005) 47-50
    • (2005) Evol. Bioinform. Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 17
    • 0035206302 scopus 로고    scopus 로고
    • Phylogeography of the red-tailed chipmunk (Tamias ruficaudus), a northern Rocky Mountain endemic
    • Good J.M., and Sullivan J. Phylogeography of the red-tailed chipmunk (Tamias ruficaudus), a northern Rocky Mountain endemic. Mol. Ecol. 10 (2001) 2683-2695
    • (2001) Mol. Ecol. , vol.10 , pp. 2683-2695
    • Good, J.M.1    Sullivan, J.2
  • 18
    • 0035047175 scopus 로고    scopus 로고
    • Speciation, hybrid zones and phylogeography - or seeing genes in space and time
    • Hewitt G.M. Speciation, hybrid zones and phylogeography - or seeing genes in space and time. Mol. Ecol. 10 (2001) 537-549
    • (2001) Mol. Ecol. , vol.10 , pp. 537-549
    • Hewitt, G.M.1
  • 19
    • 33748073420 scopus 로고    scopus 로고
    • A chloroplast genealogy of Hordeum (Poaceae): long-term persisting haplotypes, incomplete lineage sorting, regional extinction, and the consequences for phylogenetic inference
    • Jakob S.S., and Blattner F.R. A chloroplast genealogy of Hordeum (Poaceae): long-term persisting haplotypes, incomplete lineage sorting, regional extinction, and the consequences for phylogenetic inference. Mol. Biol. Evol. 23 (2006) 1602-1612
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 1602-1612
    • Jakob, S.S.1    Blattner, F.R.2
  • 20
    • 85010540226 scopus 로고    scopus 로고
    • Diversity patterns in the genus Draba: a first global perspective
    • Jordon-Thaden I., and Koch M.A. Diversity patterns in the genus Draba: a first global perspective. Plant Ecol. Div. 1 2 (2008) 255-263
    • (2008) Plant Ecol. Div. , vol.1 , Issue.2 , pp. 255-263
    • Jordon-Thaden, I.1    Koch, M.A.2
  • 21
    • 35348866183 scopus 로고    scopus 로고
    • Diploid apomicts of the Boechera holboellii complex show large scale chromosome substitutions and different aberrant chromosomes
    • Kantama L., Sharbel T.F., Schranz M.E., Mitchell-Olds T., de Vries S., and de Jong H. Diploid apomicts of the Boechera holboellii complex show large scale chromosome substitutions and different aberrant chromosomes. Proc. Natl. Acad. Sci. USA 104 (2007) 14026-14031
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 14026-14031
    • Kantama, L.1    Sharbel, T.F.2    Schranz, M.E.3    Mitchell-Olds, T.4    de Vries, S.5    de Jong, H.6
  • 22
    • 85088735604 scopus 로고    scopus 로고
    • Boechera or not? Phylogeny and phylogeography of eastern North American Boechera species (Brassicaceae)
    • accepted
    • Kiefer, C., Dobeš, C., Koch, M.A., accepted. Boechera or not? Phylogeny and phylogeography of eastern North American Boechera species (Brassicaceae). Taxon.
    • Taxon
    • Kiefer, C.1    Dobeš, C.2    Koch, M.A.3
  • 23
    • 0037357446 scopus 로고    scopus 로고
    • Multiple hybrid formation in natural populations: concerted evolution of the internal transcribed spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae)
    • Koch M.A., Dobeš C., and Mitchell-Olds T. Multiple hybrid formation in natural populations: concerted evolution of the internal transcribed spacer of nuclear ribosomal DNA (ITS) in North American Arabis divaricarpa (Brassicaceae). Mol. Biol. Evol. 20 (2003) 338-350
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 338-350
    • Koch, M.A.1    Dobeš, C.2    Mitchell-Olds, T.3
  • 24
    • 33644763932 scopus 로고    scopus 로고
    • Three times out of Asia Minor - the phylogeography of Arabis alpina L. (Brassiaceae)
    • Koch M.A., Kiefer C., Vogel J., Ehrich D., Brochmann C., and Mummenhoff K. Three times out of Asia Minor - the phylogeography of Arabis alpina L. (Brassiaceae). Mol. Ecol. 15 (2006) 825-839
    • (2006) Mol. Ecol. , vol.15 , pp. 825-839
    • Koch, M.A.1    Kiefer, C.2    Vogel, J.3    Ehrich, D.4    Brochmann, C.5    Mummenhoff, K.6
  • 25
    • 33845878532 scopus 로고    scopus 로고
    • SuperNetwork identifies multiple events of plastid trnF (GAA) pseudogene evolution in the Brassicaceae
    • Koch M.A., Dobeš C., Kiefer C., Schmickl R., Klimes L., and Lysak M.A. SuperNetwork identifies multiple events of plastid trnF (GAA) pseudogene evolution in the Brassicaceae. Mol. Biol. Evol. 24 (2007) 63-73
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 63-73
    • Koch, M.A.1    Dobeš, C.2    Kiefer, C.3    Schmickl, R.4    Klimes, L.5    Lysak, M.A.6
  • 26
    • 34547538793 scopus 로고    scopus 로고
    • Evolution and genetic differentiation among relatives of Arabidopsis thaliana
    • Koch M.A., and Matschinger M. Evolution and genetic differentiation among relatives of Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 104 (2007) 6272-6277
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 6272-6277
    • Koch, M.A.1    Matschinger, M.2
  • 27
    • 35549005507 scopus 로고    scopus 로고
    • Modelled patterns of Late Pleistocene glacier inception and growth in the Southern and Central Rocky Mountains, USA: sensitivity to climate change and paleoclimatic implications
    • Leonard E. Modelled patterns of Late Pleistocene glacier inception and growth in the Southern and Central Rocky Mountains, USA: sensitivity to climate change and paleoclimatic implications. Quat. Sci. Rev. 26 (2007) 2152-2166
    • (2007) Quat. Sci. Rev. , vol.26 , pp. 2152-2166
    • Leonard, E.1
  • 28
    • 34250214545 scopus 로고    scopus 로고
    • Phylogeography of spruce beetles (Dendroctonus rufipennis Kirby) (Curculionidae: Scolytinae) in North America
    • Maroja L.S., Bogdanowicz S.M., Wallin K.F., Raffa K.F., and Harrison R.G. Phylogeography of spruce beetles (Dendroctonus rufipennis Kirby) (Curculionidae: Scolytinae) in North America. Mol. Ecol. 16 (2007) 2560-2573
    • (2007) Mol. Ecol. , vol.16 , pp. 2560-2573
    • Maroja, L.S.1    Bogdanowicz, S.M.2    Wallin, K.F.3    Raffa, K.F.4    Harrison, R.G.5
  • 29
    • 0033997944 scopus 로고    scopus 로고
    • Glacial refugia of limber pine (Pinus flexilis James) inferred from the population structure of mitochondrial DNA
    • Mitton J.B., Kreiser B.R., and Latta R.G. Glacial refugia of limber pine (Pinus flexilis James) inferred from the population structure of mitochondrial DNA. Mol. Ecol. 9 (2000) 91-97
    • (2000) Mol. Ecol. , vol.9 , pp. 91-97
    • Mitton, J.B.1    Kreiser, B.R.2    Latta, R.G.3
  • 30
    • 18244367929 scopus 로고    scopus 로고
    • The history and geography of diversification within the butterfly genus Lycaeides in North America
    • Nice C.C., Anthony N., Gelembiuk G., Ratermans D., and Ffrench-Constant R. The history and geography of diversification within the butterfly genus Lycaeides in North America. Mol. Ecol. 14 (2005) 1741-1754
    • (2005) Mol. Ecol. , vol.14 , pp. 1741-1754
    • Nice, C.C.1    Anthony, N.2    Gelembiuk, G.3    Ratermans, D.4    Ffrench-Constant, R.5
  • 32
    • 0035139147 scopus 로고    scopus 로고
    • Intraspecific phylogenetics: trees grafting into networks
    • Posada D., and Crandall K.A. Intraspecific phylogenetics: trees grafting into networks. Trends Ecol. Evolut. 16 (2001) 37-45
    • (2001) Trends Ecol. Evolut. , vol.16 , pp. 37-45
    • Posada, D.1    Crandall, K.A.2
  • 35
    • 0028984102 scopus 로고
    • The breeding system of six species of Arabis (Brassicaceae)
    • Roy B.A. The breeding system of six species of Arabis (Brassicaceae). Am. J. Bot. 82 (1995) 869-877
    • (1995) Am. J. Bot. , vol.82 , pp. 869-877
    • Roy, B.A.1
  • 36
    • 70350385234 scopus 로고    scopus 로고
    • Schmickl, R., Kiefer, C., Dobeš, C., Koch, M.A., 2008. Evolution of trnF(GAA) pseudogenes in cruciferous plants. Plant Sys. Evol. doi: 10.1007/s00606-008-0030-2.
    • Schmickl, R., Kiefer, C., Dobeš, C., Koch, M.A., 2008. Evolution of trnF(GAA) pseudogenes in cruciferous plants. Plant Sys. Evol. doi: 10.1007/s00606-008-0030-2.
  • 37
    • 18744404481 scopus 로고    scopus 로고
    • Several Pleistocene refugia detected in the high alpine plant Phyteuma globulariifolium Sternb. & Hoppe (Campanulaceae) in European alps
    • Schönswetter P., Tribsch A., Barfuss M., and Niklfeld H. Several Pleistocene refugia detected in the high alpine plant Phyteuma globulariifolium Sternb. & Hoppe (Campanulaceae) in European alps. Mol. Ecol. 11 (2002) 2637-2647
    • (2002) Mol. Ecol. , vol.11 , pp. 2637-2647
    • Schönswetter, P.1    Tribsch, A.2    Barfuss, M.3    Niklfeld, H.4
  • 38
    • 27544512634 scopus 로고    scopus 로고
    • Sexual reproduction, hybridization, apomixis and polyploidization in the genus Boechera (Brassicaceae)
    • Schranz M.E., Dobeš C.H., Koch M.A., and Mitchell-Olds T. Sexual reproduction, hybridization, apomixis and polyploidization in the genus Boechera (Brassicaceae). Am. J. Bot. 92 (2005) 1797-1810
    • (2005) Am. J. Bot. , vol.92 , pp. 1797-1810
    • Schranz, M.E.1    Dobeš, C.H.2    Koch, M.A.3    Mitchell-Olds, T.4
  • 39
    • 0034775737 scopus 로고    scopus 로고
    • Recurrent polyploid origins and chloroplast phylogeography in the Arabis holboellii complex (Brassicaceae)
    • Sharbel T.F., and Mitchell-Olds T. Recurrent polyploid origins and chloroplast phylogeography in the Arabis holboellii complex (Brassicaceae). Heredity 87 (2001) 59-68
    • (2001) Heredity , vol.87 , pp. 59-68
    • Sharbel, T.F.1    Mitchell-Olds, T.2
  • 41
    • 62549147597 scopus 로고    scopus 로고
    • Multilocus patterns of nucleotide diversity, population structure and linkage disequilibrium in Boechera stricta, a wild relative of Arabidopsis
    • doi:10.1534/genetics.108.095364
    • Song, B.-H., Windsor, A.J., Schmid, K.J., Ramos-Onsins, S., Schranz, M.E., Heidel, A., Mitchell-Olds, T., 2009. Multilocus patterns of nucleotide diversity, population structure and linkage disequilibrium in Boechera stricta, a wild relative of Arabidopsis. Genetics. doi:10.1534/genetics.108.095364.
    • (2009) Genetics
    • Song, B.-H.1    Windsor, A.J.2    Schmid, K.J.3    Ramos-Onsins, S.4    Schranz, M.E.5    Heidel, A.6    Mitchell-Olds, T.7
  • 43
    • 0032055176 scopus 로고    scopus 로고
    • Comparative phylogeography and postglacial colonization routes in Europe
    • Taberlet P., Fumagalli L., Wust-Saucy A.-G., and Cosson J.-F. Comparative phylogeography and postglacial colonization routes in Europe. Mol. Ecol. 7 (1998) 453-464
    • (1998) Mol. Ecol. , vol.7 , pp. 453-464
    • Taberlet, P.1    Fumagalli, L.2    Wust-Saucy, A.-G.3    Cosson, J.-F.4
  • 45
    • 34250638066 scopus 로고    scopus 로고
    • New and noteworthy species of Boechera (Brassicaceae) I: sexual diploids
    • Windham M.D., and Al-Shehbaz I.A. New and noteworthy species of Boechera (Brassicaceae) I: sexual diploids. Harv. Pap. Bot. 11 (2006) 61-68
    • (2006) Harv. Pap. Bot. , vol.11 , pp. 61-68
    • Windham, M.D.1    Al-Shehbaz, I.A.2
  • 46
    • 65649127595 scopus 로고    scopus 로고
    • New and noteworthy species of Boechera (Brassicaceae) II: apomictic hybrids
    • Windham M.D., and Al-Shehbaz I.A. New and noteworthy species of Boechera (Brassicaceae) II: apomictic hybrids. Harv. Pap. Bot. 11 (2007) 257-274
    • (2007) Harv. Pap. Bot. , vol.11 , pp. 257-274
    • Windham, M.D.1    Al-Shehbaz, I.A.2
  • 47
    • 70450261412 scopus 로고    scopus 로고
    • New and noteworthy species of Boechera (Brassicaceae) III: additional diploids and apomictic hybrids
    • Windham M.D., and Al-Shehbaz I.A. New and noteworthy species of Boechera (Brassicaceae) III: additional diploids and apomictic hybrids. Harv. Pap. Bot. 12 (2007) 251-274
    • (2007) Harv. Pap. Bot. , vol.12 , pp. 251-274
    • Windham, M.D.1    Al-Shehbaz, I.A.2


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