-
2
-
-
84867121875
-
Intratumor heterogeneity: Evolution through space and time
-
Swanton C (2012). Intratumor heterogeneity: evolution through space and time. Cancer Res 72, 4875–4882. http://dx.doi.org/10.1158/0008-5472.can-12-2217
-
(2012)
Cancer Res
, vol.72
, pp. 4875-4882
-
-
Swanton, C.1
-
3
-
-
84913590602
-
Cancer: Evolution within a lifetime
-
Gerlinger M, McGranahan N, Dewhurst SM, Burrell RA, Tomlinson I, and Swanton C (2014). Cancer: evolution within a lifetime. Annu Rev Genet 48, 215–236. http://dx.doi.org/10.1146/annurev-genet-120213-092314
-
(2014)
Annu Rev Genet
, vol.48
, pp. 215-236
-
-
Gerlinger, M.1
McGranahan, N.2
Dewhurst, S.M.3
Burrell, R.A.4
Tomlinson, I.5
Swanton, C.6
-
4
-
-
84875490185
-
Cancer genome landscapes
-
Vogelstein B, Papadopoulos N, Velculescu VE, Zhou S, Diaz Jr LA, and Kinzler KW (2013). Cancer genome landscapes. Science 339, 1546–1558. http://dx.doi.org/10.1126/science.1235122
-
(2013)
Science
, vol.339
, pp. 1546-1558
-
-
Vogelstein, B.1
Papadopoulos, N.2
Velculescu, V.E.3
Zhou, S.4
Diaz, L.A.5
Kinzler, K.W.6
-
5
-
-
84884997982
-
Emerging landscape of oncogenic signatures across human cancers
-
Ciriello G, Miller ML, Aksoy BA, Senbabaoglu Y, Schultz N, and Sander C (2013). Emerging landscape of oncogenic signatures across human cancers. Nat Genet 45, 1127–1133. http://dx.doi.org/10.1038/ng.2762
-
(2013)
Nat Genet
, vol.45
, pp. 1127-1133
-
-
Ciriello, G.1
Miller, M.L.2
Aksoy, B.A.3
Senbabaoglu, Y.4
Schultz, N.5
Sander, C.6
-
6
-
-
84885008220
-
Pan-cancer patterns of somatic copy number alteration
-
Zack TI, Schumacher SE, Carter SL, Cherniack AD, Saksena G, Tabak B, Lawrence MS, Zhang CZ, Wala J, and Mermel CH, et al (2013). Pan-cancer patterns of somatic copy number alteration. Nat Genet 45, 1134–1140. http://dx.doi.org/10.1038/ng.2760
-
(2013)
Nat Genet
, vol.45
, pp. 1134-1140
-
-
Zack, T.I.1
Schumacher, S.E.2
Carter, S.L.3
Cherniack, A.D.4
Saksena, G.5
Tabak, B.6
Lawrence, M.S.7
Zhang, C.Z.8
Wala, J.9
Mermel, C.H.10
-
7
-
-
84873391241
-
Functional genomic analysis of chromosomal aberrations in a compendium of 8000 cancer genomes
-
Kim TM, Xi R, Luquette LJ, Park RW, Johnson MD, and Park PJ (2013). Functional genomic analysis of chromosomal aberrations in a compendium of 8000 cancer genomes. Genome Res 23, 217–227. http://dx.doi.org/10.1101/gr.140301.112
-
(2013)
Genome Res
, vol.23
, pp. 217-227
-
-
Kim, T.M.1
Xi, R.2
Luquette, L.J.3
Park, R.W.4
Johnson, M.D.5
Park, P.J.6
-
8
-
-
84863922124
-
Comprehensive molecular characterization of human colon and rectal cancer
-
The Cancer Genome Atlas Network
-
The Cancer Genome Atlas Network (2012). Comprehensive molecular characterization of human colon and rectal cancer. Nature 487, 330–337. http://dx.doi.org/10.1038/nature11252
-
(2012)
Nature
, vol.487
, pp. 330-337
-
-
-
9
-
-
84877028141
-
Comprehensive molecular portraits of human breast tumours
-
The Cancer Genome Atlas Network
-
The Cancer Genome Atlas Network (2012). Comprehensive molecular portraits of human breast tumours. Nature 490, 61–70. http://dx.doi.org/10.1038/nature11412
-
(2012)
Nature
, vol.490
, pp. 61-70
-
-
-
10
-
-
84861576201
-
The landscape of cancer genes and mutational processes in breast cancer
-
Stephens PJ, Tarpey PS, Davies H, Van Loo P, Greenman C, Wedge DC, Nik-Zainal S, Martin S, Varela I, and Bignell GR, et al (2012). The landscape of cancer genes and mutational processes in breast cancer. Nature 486, 400–404. http://dx.doi.org/10.1038/nature11017
-
(2012)
Nature
, vol.486
, pp. 400-404
-
-
Stephens, P.J.1
Tarpey, P.S.2
Davies, H.3
Van Loo, P.4
Greenman, C.5
Wedge, D.C.6
Nik-Zainal, S.7
Martin, S.8
Varela, I.9
Bignell, G.R.10
-
11
-
-
77249119762
-
The landscape of somatic copy-number alteration across human cancers
-
Beroukhim R, Mermel CH, Porter D, Wei G, Raychaudhuri S, Donovan J, Barretina J, Boehm JS, Dobson J, and Urashima M, et al (2010). The landscape of somatic copy-number alteration across human cancers. Nature 463, 899–905. http://dx.doi.org/10.1038/nature08822
-
(2010)
Nature
, vol.463
, pp. 899-905
-
-
Beroukhim, R.1
Mermel, C.H.2
Porter, D.3
Wei, G.4
Raychaudhuri, S.5
Donovan, J.6
Barretina, J.7
Boehm, J.S.8
Dobson, J.9
Urashima, M.10
-
13
-
-
80053393750
-
Insight into the heterogeneity of breast cancer through next-generation sequencing
-
Russnes HG, Navin N, Hicks J, and Borresen-Dale AL (2011). Insight into the heterogeneity of breast cancer through next-generation sequencing. J Clin Invest 121, 3810–3818. http://dx.doi.org/10.1172/JCI57088
-
(2011)
J Clin Invest
, vol.121
, pp. 3810-3818
-
-
Russnes, H.G.1
Navin, N.2
Hicks, J.3
Borresen-Dale, A.L.4
-
14
-
-
84875211731
-
Cancer heterogeneity: Implications for targeted therapeutics
-
Fisher R, Pusztai L, and Swanton C (2013). Cancer heterogeneity: implications for targeted therapeutics. Br J Cancer 108, 479–485. http://dx.doi.org/10.1038/bjc.2012.581
-
(2013)
Br J Cancer
, vol.108
, pp. 479-485
-
-
Fisher, R.1
Pusztai, L.2
Swanton, C.3
-
15
-
-
84927626602
-
Translational implications of tumor heterogeneity
-
Jamal-Hanjani M, Quezada SA, Larkin J, and Swanton C (2015). Translational implications of tumor heterogeneity. Clin Cancer Res 21, 1258–1266. http://dx.doi.org/10.1158/1078-0432.CCR-14-1429
-
(2015)
Clin Cancer Res
, vol.21
, pp. 1258-1266
-
-
Jamal-Hanjani, M.1
Quezada, S.A.2
Larkin, J.3
Swanton, C.4
-
16
-
-
84906085825
-
The challenge of intratumour heterogeneity in precision medicine
-
Seoane J and De Mattos-Arruda L (2014). The challenge of intratumour heterogeneity in precision medicine. J Intern Med 276, 41–51. http://dx.doi.org/10.1111/joim.12240
-
(2014)
J Intern Med
, vol.276
, pp. 41-51
-
-
Seoane, J.1
De Mattos-Arruda, L.2
-
17
-
-
84884365015
-
The causes and consequences of genetic heterogeneity in cancer evolution
-
Burrell RA, McGranahan N, Bartek J, and Swanton C (2013). The causes and consequences of genetic heterogeneity in cancer evolution. Nature 501, 338–345. http://dx.doi.org/10.1038/nature12625
-
(2013)
Nature
, vol.501
, pp. 338-345
-
-
Burrell, R.A.1
McGranahan, N.2
Bartek, J.3
Swanton, C.4
-
18
-
-
84920264636
-
Dissecting cancer evolution at the macro-heterogeneity and micro-heterogeneity scale
-
Barber LJ, Davies MN, and Gerlinger M (2014). Dissecting cancer evolution at the macro-heterogeneity and micro-heterogeneity scale. Curr Opin Genet Dev 30C, 1–6. http://dx.doi.org/10.1016/j.gde.2014.12.001
-
(2014)
Curr Opin Genet Dev
, vol.30C
, pp. 1-6
-
-
Barber, L.J.1
Davies, M.N.2
Gerlinger, M.3
-
19
-
-
84884407337
-
Tumour heterogeneity in the clinic
-
Bedard PL, Hansen AR, Ratain MJ, and Siu LL (2013). Tumour heterogeneity in the clinic. Nature 501, 355–364. http://dx.doi.org/10.1038/nature12627
-
(2013)
Nature
, vol.501
, pp. 355-364
-
-
Bedard, P.L.1
Hansen, A.R.2
Ratain, M.J.3
Siu, L.L.4
-
20
-
-
84898542288
-
Liquid biopsies: Genotyping circulating tumor DNA
-
Diaz Jr LA and Bardelli A (2014). Liquid biopsies: genotyping circulating tumor DNA. J Clin Oncol 32, 579–586. http://dx.doi.org/10.1200/JCO.2012.45.2011
-
(2014)
J Clin Oncol
, vol.32
, pp. 579-586
-
-
Diaz, L.A.1
Bardelli, A.2
-
21
-
-
84879796970
-
Circulating tumour cells and cell-free DNA as tools for managing breast cancer
-
DeMattos-Arruda L, Cortes J, Santarpia L, Vivancos A, Tabernero J, Reis-Filho JS, and Seoane J (2013). Circulating tumour cells and cell-free DNA as tools for managing breast cancer. Nat Rev Clin Oncol 10, 377–389. http://dx.doi.org/10.1038/nrclinonc.2013.80
-
(2013)
Nat Rev Clin Oncol
, vol.10
, pp. 377-389
-
-
Demattos-Arruda, L.1
Cortes, J.2
Santarpia, L.3
Vivancos, A.4
Tabernero, J.5
Reis-Filho, J.S.6
Seoane, J.7
-
22
-
-
84886379960
-
Going with the flow: From circulating tumor cells to DNA
-
Bidard FC, Weigelt B, and Reis-Filho JS (2013). Going with the flow: from circulating tumor cells to DNA. Sci Transl Med 5, 207ps214. http://dx.doi.org/10.1126/scitranslmed.3006305
-
(2013)
Sci Transl Med
, vol.5
, pp. 207-214
-
-
Bidard, F.C.1
Weigelt, B.2
Reis-Filho, J.S.3
-
23
-
-
84926416450
-
Circulating tumor DNA as a non-invasive substitute to metastasis biopsy for tumor genotyping and personalized medicine in a prospective trial across all tumor types
-
Lebofsky R, Decraene C, Bernard V, Kamal M, Blin A, Leroy Q, Rio Frio T, Pierron G, Callens C, and Bieche I, et al (2015). Circulating tumor DNA as a non-invasive substitute to metastasis biopsy for tumor genotyping and personalized medicine in a prospective trial across all tumor types. Mol Oncol 9, 783–790. http://dx.doi.org/10.1016/j.molonc.2014.12.003
-
(2015)
Mol Oncol
, vol.9
, pp. 783-790
-
-
Lebofsky, R.1
Decraene, C.2
Bernard, V.3
Kamal, M.4
Blin, A.5
Leroy, Q.6
Rio Frio, T.7
Pierron, G.8
Callens, C.9
Bieche, I.10
-
24
-
-
84896371874
-
Detection of circulating tumor DNA in early- and late-stage human malignancies
-
Bettegowda C, Sausen M, Leary RJ, Kinde I, Wang Y, Agrawal N, Bartlett BR, Wang H, Luber B, and Alani RM, et al (2014). Detection of circulating tumor DNA in early- and late-stage human malignancies. Sci Transl Med 6, 224ra224. http://dx.doi.org/10.1126/scitranslmed.3007094
-
(2014)
Sci Transl Med
, vol.6
-
-
Bettegowda, C.1
Sausen, M.2
Leary, R.J.3
Kinde, I.4
Wang, Y.5
Agrawal, N.6
Bartlett, B.R.7
Wang, H.8
Luber, B.9
Alani, R.M.10
-
25
-
-
84903218109
-
An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage
-
Newman AM, Bratman SV, To J, Wynne JF, Eclov NC, Modlin LA, Liu CL, Neal JW, Wakelee HA, and Merritt RE, et al (2014). An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage. Nat Med 20, 548–554. http://dx.doi.org/10.1038/nm.3519
-
(2014)
Nat Med
, vol.20
, pp. 548-554
-
-
Newman, A.M.1
Bratman, S.V.2
To, J.3
Wynne, J.F.4
Eclov, N.C.5
Modlin, L.A.6
Liu, C.L.7
Neal, J.W.8
Wakelee, H.A.9
Merritt, R.E.10
-
26
-
-
84872020299
-
Cancer genome scanning in plasma: Detection of tumor-associated copy number aberrations, single-nucleotide variants, and tumoral heterogeneity by massively parallel sequencing
-
Chan KC, Jiang P, Zheng YW, Liao GJ, Sun H, Wong J, Siu SS, Chan WC, Chan SL, and Chan AT, et al (2013). Cancer genome scanning in plasma: detection of tumor-associated copy number aberrations, single-nucleotide variants, and tumoral heterogeneity by massively parallel sequencing. Clin Chem 59, 211–224. http://dx.doi.org/10.1373/clinchem.2012.196014
-
(2013)
Clin Chem
, vol.59
, pp. 211-224
-
-
Chan, K.C.1
Jiang, P.2
Zheng, Y.W.3
Liao, G.J.4
Sun, H.5
Wong, J.6
Siu, S.S.7
Chan, W.C.8
Chan, S.L.9
Chan, A.T.10
-
27
-
-
84875520648
-
Analysis of circulating tumor DNA to monitor metastatic breast cancer
-
Dawson SJ, Tsui DW, Murtaza M, Biggs H, Rueda OM, Chin SF, Dunning MJ, Gale D, Forshew T, and Mahler-Araujo B, et al (2013). Analysis of circulating tumor DNA to monitor metastatic breast cancer. N Engl J Med 368, 1199–1209. http://dx.doi.org/10.1056/NEJMoa1213261
-
(2013)
N Engl J Med
, vol.368
, pp. 1199-1209
-
-
Dawson, S.J.1
Tsui, D.W.2
Murtaza, M.3
Biggs, H.4
Rueda, O.M.5
Chin, S.F.6
Dunning, M.J.7
Gale, D.8
Forshew, T.9
Mahler-Araujo, B.10
-
28
-
-
84875824898
-
Tumor-associated copy number changes in the circulation of patients with prostate cancer identified through whole-genome sequencing
-
Heitzer E, Ulz P, Belic J, Gutschi S, Quehenberger F, Fischereder K, Benezeder T, Auer M, Pischler C, and Mannweiler S, et al (2013). Tumor-associated copy number changes in the circulation of patients with prostate cancer identified through whole-genome sequencing. Genome Med 5, 30. http://dx.doi.org/10.1186/gm434
-
(2013)
Genome Med
, vol.5
, pp. 30
-
-
Heitzer, E.1
Ulz, P.2
Belic, J.3
Gutschi, S.4
Quehenberger, F.5
Fischereder, K.6
Benezeder, T.7
Auer, M.8
Pischler, C.9
Mannweiler, S.10
-
29
-
-
84896737232
-
Quantitative identification of mutant alleles derived from lung cancer in plasma cell-free DNA via anomaly detection using deep sequencing data
-
Kukita Y, Uchida J, Oba S, Nishino K, Kumagai T, Taniguchi K, Okuyama T, Imamura F, and Kato K, et al (2013). Quantitative identification of mutant alleles derived from lung cancer in plasma cell-free DNA via anomaly detection using deep sequencing data. PLoS One 8 e81468. http://dx.doi.org/10.1371/journal.pone.0081468
-
(2013)
Plos One
, vol.8
-
-
Kukita, Y.1
Uchida, J.2
Oba, S.3
Nishino, K.4
Kumagai, T.5
Taniguchi, K.6
Okuyama, T.7
Imamura, F.8
Kato, K.9
-
30
-
-
84863011201
-
Genomic analysis of circulating cell-free DNA infers breast cancer dormancy
-
Shaw JA, Page K, Blighe K, Hava N, Guttery D, Ward B, Brown J, Ruangpratheep C, Stebbing J, and Payne R, et al (2012). Genomic analysis of circulating cell-free DNA infers breast cancer dormancy. Genome Res 22, 220–231. http://dx.doi.org/10.1101/gr.123497.111
-
(2012)
Genome Res
, vol.22
, pp. 220-231
-
-
Shaw, J.A.1
Page, K.2
Blighe, K.3
Hava, N.4
Guttery, D.5
Ward, B.6
Brown, J.7
Ruangpratheep, C.8
Stebbing, J.9
Payne, R.10
-
31
-
-
84863967346
-
Ultrasensitive measurement of hotspot mutations in tumor DNA in blood using errorsuppressed multiplexed deep sequencing
-
Narayan A, Carriero NJ, Gettinger SN, Kluytenaar J, Kozak KR, Yock TI, Muscato NE, Ugarelli P, Decker RH, and Patel AA, et al (2012). Ultrasensitive measurement of hotspot mutations in tumor DNA in blood using errorsuppressed multiplexed deep sequencing. Cancer Res 72, 3492–3498. http://dx.doi.org/10.1158/0008-5472.can-11-4037
-
(2012)
Cancer Res
, vol.72
, pp. 3492-3498
-
-
Narayan, A.1
Carriero, N.J.2
Gettinger, S.N.3
Kluytenaar, J.4
Kozak, K.R.5
Yock, T.I.6
Muscato, N.E.7
Ugarelli, P.8
Decker, R.H.9
Patel, A.A.10
-
32
-
-
84906890825
-
Capturing intra-tumor genetic heterogeneity by de novo mutation profiling of circulating cell-free tumorDNA: A proof-of-principle
-
DeMattos-Arruda L, Weigelt B, Cortes J, Won HH, Ng CK, Nuciforo P, Bidard FC, Aura C, Saura C, and Peg V, et al (2014). Capturing intra-tumor genetic heterogeneity by de novo mutation profiling of circulating cell-free tumorDNA: a proof-of-principle. Ann Oncol 25, 1729–1735. http://dx.doi.org/10.1093/annonc/mdu239
-
(2014)
Ann Oncol
, vol.25
, pp. 1729-1735
-
-
Demattos-Arruda, L.1
Weigelt, B.2
Cortes, J.3
Won, H.H.4
Ng, C.K.5
Nuciforo, P.6
Bidard, F.C.7
Aura, C.8
Saura, C.9
Peg, V.10
-
33
-
-
84906827268
-
The dynamic range of circulating tumor DNA in metastatic breast cancer
-
Heidary M, Auer M, Ulz P, Heitzer E, Petru E, Gasch C, Riethdorf S, Mauermann O, Lafer I, and Pristauz G, et al (2014). The dynamic range of circulating tumor DNA in metastatic breast cancer. Breast Cancer Res 16, 421. http://dx.doi.org/10.1186/s13058-014-0421-y.
-
(2014)
Breast Cancer Res
, vol.16
, pp. 421
-
-
Heidary, M.1
Auer, M.2
Ulz, P.3
Heitzer, E.4
Petru, E.5
Gasch, C.6
Riethdorf, S.7
Mauermann, O.8
Lafer, I.9
Pristauz, G.10
-
34
-
-
84870312106
-
Detection of chromosomal alterations in the circulation of cancer patients with whole-genome sequencing
-
Leary RJ, Sausen M, Kinde I, Papadopoulos N, Carpten JD, Craig D, O'Shaughnessy J, Kinzler KW, Parmigiani G, and Vogelstein B, et al (2012). Detection of chromosomal alterations in the circulation of cancer patients with whole-genome sequencing. Sci Transl Med 4, 162ra154. http://dx.doi.org/10.1126/scitranslmed.3004742
-
(2012)
Sci Transl Med
, vol.4
, pp. 162
-
-
Leary, R.J.1
Sausen, M.2
Kinde, I.3
Papadopoulos, N.4
Carpten, J.D.5
Craig, D.6
O'shaughnessy, J.7
Kinzler, K.W.8
Parmigiani, G.9
Vogelstein, B.10
-
35
-
-
84905093469
-
Single-nucleotide polymorphism-based noninvasive prenatal screening in a high-risk and low-risk cohort
-
Pergament E, Cuckle H, Zimmermann B, Banjevic M, Sigurjonsson S, Ryan A, Hall MP, Dodd M, Lacroute P, and Stosic M, et al (2014). Single-nucleotide polymorphism-based noninvasive prenatal screening in a high-risk and low-risk cohort. Obstet Gynecol 124, 210–218. http://dx.doi.org/10.1097/AOG.0000000000000363
-
(2014)
Obstet Gynecol
, vol.124
, pp. 210-218
-
-
Pergament, E.1
Cuckle, H.2
Zimmermann, B.3
Banjevic, M.4
Sigurjonsson, S.5
Ryan, A.6
Hall, M.P.7
Dodd, M.8
Lacroute, P.9
Stosic, M.10
-
36
-
-
84880041032
-
SNP-based non-invasive prenatal testing detects sex chromosome aneuploidies with high accuracy
-
Samango-Sprouse C, Banjevic M, Ryan A, Sigurjonsson S, Zimmermann B, Hill M, Hall MP, Westemeyer M, Saucier J, and Demko Z, et al (2013). SNP-based non-invasive prenatal testing detects sex chromosome aneuploidies with high accuracy. Prenat Diagn 33, 643–649. http://dx.doi.org/10.1002/pd.4159
-
(2013)
Prenat Diagn
, vol.33
, pp. 643-649
-
-
Samango-Sprouse, C.1
Banjevic, M.2
Ryan, A.3
Sigurjonsson, S.4
Zimmermann, B.5
Hill, M.6
Hall, M.P.7
Westemeyer, M.8
Saucier, J.9
Demko, Z.10
-
37
-
-
84924766673
-
Expanding the scope of noninvasive prenatal testing: Detection of fetal microdeletion syndromes
-
Wapner RJ, Babiarz JE, Levy B, Stosic M, Zimmermann B, Sigurjonsson S, Wayham N, Ryan A, Banjevic M, and Lacroute P, et al (2015). Expanding the scope of noninvasive prenatal testing: detection of fetal microdeletion syndromes. Am J Obstet Gynecol 212(332), e331–e339. http://dx.doi.org/10.1016/j.ajog.2014.11.041
-
(2015)
Am J Obstet Gynecol
, vol.212
, Issue.332
-
-
Wapner, R.J.1
Babiarz, J.E.2
Levy, B.3
Stosic, M.4
Zimmermann, B.5
Sigurjonsson, S.6
Wayham, N.7
Ryan, A.8
Banjevic, M.9
Lacroute, P.10
-
38
-
-
84870695892
-
Noninvasive prenatal aneuploidy testing of chromosomes 13, 18, 21, X, and Y, using targeted sequencing of polymorphic loci
-
Zimmermann B, Hill M, Gemelos G, Demko Z, Banjevic M, Baner J, Ryan A, Sigurjonsson S, Chopra N, and Dodd M, et al (2012). Noninvasive prenatal aneuploidy testing of chromosomes 13, 18, 21, X, and Y, using targeted sequencing of polymorphic loci. Prenat Diagn 32, 1233–1241. http://dx.doi.org/10.1002/pd.3993
-
(2012)
Prenat Diagn
, vol.32
, pp. 1233-1241
-
-
Zimmermann, B.1
Hill, M.2
Gemelos, G.3
Demko, Z.4
Banjevic, M.5
Baner, J.6
Ryan, A.7
Sigurjonsson, S.8
Chopra, N.9
Dodd, M.10
-
39
-
-
84878164024
-
Validation of targeted sequencing of single-nucleotide polymorphisms for non-invasive prenatal detection of aneuploidy of chromosomes 13, 18, 21, X, and Y
-
Nicolaides KH, Syngelaki A, Gil M, Atanasova V, and Markova D (2013). Validation of targeted sequencing of single-nucleotide polymorphisms for non-invasive prenatal detection of aneuploidy of chromosomes 13, 18, 21, X, and Y. Prenat Diagn 33, 575–579. http://dx.doi.org/10.1002/pd.4103
-
(2013)
Prenat Diagn
, vol.33
, pp. 575-579
-
-
Nicolaides, K.H.1
Syngelaki, A.2
Gil, M.3
Atanasova, V.4
Markova, D.5
-
40
-
-
34547591343
-
Primer3Plus, an enhanced web interface to Primer3
-
Untergasser A, Nijveen H, Rao X, Bisseling T, Geurts R, and Leunissen JA (2007). Primer3Plus, an enhanced web interface to Primer3. Nucleic Acids Res 35, W71–W74. http://dx.doi.org/10.1093/nar/gkm306.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. W71-W74
-
-
Untergasser, A.1
Nijveen, H.2
Rao, X.3
Bisseling, T.4
Geurts, R.5
Leunissen, J.A.6
-
41
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H and Durbin R (2009). Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754–1760. http://dx.doi.org/10.1093/bioinformatics/btp324
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
42
-
-
68549104404
-
The sequence alignment/map format and SAMtools
-
Genome Project Data Processing Subgroup
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R, and Genome Project Data Processing Subgroup (2009). The sequence alignment/map format and SAMtools. Bioinformatics 25, 2078–2079. http://dx.doi.org/10.1093/bioinformatics/btp352
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
43
-
-
84905112289
-
Genomic imbalance in products of conception: Single-nucleotide polymorphism chromosomal microarray analysis
-
Levy B, Sigurjonsson S, Pettersen B, Maisenbacher MK, Hall MP, Demko Z, Lathi RB, Tao R, Aggarwal V, and Rabinowitz M (2014). Genomic imbalance in products of conception: single-nucleotide polymorphism chromosomal microarray analysis. Obstet Gynecol 124, 202–209. http://dx.doi.org/10.1097/AOG.0000000000000325
-
(2014)
Obstet Gynecol
, vol.124
, pp. 202-209
-
-
Levy, B.1
Sigurjonsson, S.2
Pettersen, B.3
Maisenbacher, M.K.4
Hall, M.P.5
Demko, Z.6
Lathi, R.B.7
Tao, R.8
Aggarwal, V.9
Rabinowitz, M.10
-
44
-
-
84890250764
-
Computational optimisation of targeted DNA sequencing for cancer detection
-
Martinez P, McGranahan N, Birkbak NJ, Gerlinger M, and Swanton C (2013). Computational optimisation of targeted DNA sequencing for cancer detection. Sci Rep 3. http://dx.doi.org/10.1038/srep03309
-
(2013)
Sci Rep
, pp. 3
-
-
Martinez, P.1
McGranahan, N.2
Birkbak, N.J.3
Gerlinger, M.4
Swanton, C.5
-
45
-
-
84868682387
-
Multi-purpose utility of circulating plasma DNA testing in patients with advanced cancers
-
Perkins G, Yap TA, Pope L, Cassidy AM, Dukes JP, Riisnaes R, Massard C, Cassier PA, Miranda S, and Clark J, et al (2012). Multi-purpose utility of circulating plasma DNA testing in patients with advanced cancers. PLoS One 7 e47020. http://dx.doi.org/10.1371/journal.pone.0047020
-
(2012)
Plos One
, vol.7
-
-
Perkins, G.1
Yap, T.A.2
Pope, L.3
Cassidy, A.M.4
Dukes, J.P.5
Riisnaes, R.6
Massard, C.7
Cassier, P.A.8
Miranda, S.9
Clark, J.10
-
46
-
-
84885092663
-
Distinct evolutionary trajectories of primary high-grade serous ovarian cancers revealed through spatial mutational profiling
-
Bashashati A, Ha G, Tone A, Ding J, Prentice LM, Roth A, Rosner J, Shumansky K, Kalloger S, and Senz J, et al (2013). Distinct evolutionary trajectories of primary high-grade serous ovarian cancers revealed through spatial mutational profiling. J Pathol 231, 21–34. http://dx.doi.org/10.1002/path.4230
-
(2013)
J Pathol
, vol.231
, pp. 21-34
-
-
Bashashati, A.1
Ha, G.2
Tone, A.3
Ding, J.4
Prentice, L.M.5
Roth, A.6
Rosner, J.7
Shumansky, K.8
Kalloger, S.9
Senz, J.10
-
47
-
-
84929508843
-
Haplotype-resolved genome sequencing: Experimental methods and applications
-
Snyder M, Adey A, Kitzman JO, and Shendure J (2015). Haplotype-resolved genome sequencing: experimental methods and applications. Nat Rev Genet 16, 344–358. http://dx.doi.org/10.1038/nrg3903
-
(2015)
Nat Rev Genet
, vol.16
, pp. 344-358
-
-
Snyder, M.1
Adey, A.2
Kitzman, J.O.3
Shendure, J.4
-
48
-
-
84875864497
-
Whole-genome haplotyping by dilution, amplification, and sequencing
-
Kaper F, Swamy S, Klotzle B, Munchel S, Cottrell J, Bibikova M, Chuang HY, Kruglyak S, Ronaghi M, and Eberle MA, et al (2013). Whole-genome haplotyping by dilution, amplification, and sequencing. Proc Natl Acad Sci U S A 110, 5552–5557. http://dx.doi.org/10.1073/pnas.1218696110
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 5552-5557
-
-
Kaper, F.1
Swamy, S.2
Klotzle, B.3
Munchel, S.4
Cottrell, J.5
Bibikova, M.6
Chuang, H.Y.7
Kruglyak, S.8
Ronaghi, M.9
Eberle, M.A.10
-
49
-
-
84898654757
-
Whole-genome haplotyping using long reads and statistical methods
-
Kuleshov V, Xie D, Chen R, Pushkarev D, Ma Z, Blauwkamp T, Kertesz M, and Synder M, et al (2014).Whole-genome haplotyping using long reads and statistical methods. Nat Biotechnol 32, 261–266. http://dx.doi.org/10.1038/nbt.2833.
-
(2014)
Nat Biotechnol
, vol.32
, pp. 261-266
-
-
Kuleshov, V.1
Xie, D.2
Chen, R.3
Pushkarev, D.4
Ma, Z.5
Blauwkamp, T.6
Kertesz, M.7
Synder, M.8
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