-
1
-
-
0015965707
-
The origin of O serotypes of Escherichia coli in babies after normal delivery
-
Bettelheim KA, Breadon A, Faiers MC, O'Farrell SM, Shooter RA. The origin of O serotypes of Escherichia coli in babies after normal delivery. J Hyg (Lond). 1974;72:67-70.
-
(1974)
J Hyg (Lond)
, vol.72
, pp. 67-70
-
-
Bettelheim, K.A.1
Breadon, A.2
Faiers, M.C.3
O'Farrell, S.M.4
Shooter, R.A.5
-
2
-
-
0018344592
-
Aerobic and anaerobic bacterial flora of the maternal cervix and newborn gastric fluid and conjunctiva: A prospective study
-
440845
-
Brook I, Barrett CT, Brinkman CR3rd, Martin WJ, Finegold SM. Aerobic and anaerobic bacterial flora of the maternal cervix and newborn gastric fluid and conjunctiva: a prospective study. Pediatrics. 1979;63:451-455. PMID: 440845
-
(1979)
Pediatrics
, vol.63
, pp. 451-455
-
-
Brook, I.1
Barrett, C.T.2
Brinkman, C.R.3
Martin, W.J.4
Finegold, S.M.5
-
3
-
-
77955386857
-
Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns
-
20566857
-
Dominguez-Bello MG, Costello EK, Contreras M, Magris M, Hidalgo G, Fierer N, et al. Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc Natl Acad Sci USA. 2010;107:11971-11975. doi: 10.1073/pnas.1002601107 PMID: 20566857
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 11971-11975
-
-
Dominguez-Bello, M.G.1
Costello, E.K.2
Contreras, M.3
Magris, M.4
Hidalgo, G.5
Fierer, N.6
-
4
-
-
79959247053
-
Characterization of the diversity and temporal stability of bacterial communities in human milk
-
21695057
-
Hunt KM, Foster JA, Forney LJ, Schutte UM, Beck DL, Abdo Z, et al. Characterization of the diversity and temporal stability of bacterial communities in human milk. PLoSOne. 2011;6:e21313. doi: 10. 1371/journal.pone.0021313 PMID: 21695057
-
(2011)
PLoSOne
, vol.6
, pp. e21313
-
-
Hunt, K.M.1
Foster, J.A.2
Forney, L.J.3
Schutte, U.M.4
Beck, D.L.5
Abdo, Z.6
-
5
-
-
0017341656
-
Microbial ecology of the gastrointestinal tract
-
334036
-
Savage DC. Microbial ecology of the gastrointestinal tract. Annu Rev Microbiol. 1977;31:107-133. PMID: 334036
-
(1977)
Annu Rev Microbiol.
, vol.31
, pp. 107-133
-
-
Savage, D.C.1
-
6
-
-
34547129847
-
Development of the human infant intestinal microbiota
-
17594176
-
Palmer C, Bik EM, Di Giulio DB, Relman DA, Brown PO. Development of the human infant intestinal microbiota. PLoSBiol. 2007;5:e177. PMID: 17594176
-
(2007)
PLoSBiol.
, vol.5
, pp. e177
-
-
Palmer, C.1
Bik, E.M.2
Di Giulio, D.B.3
Relman, D.A.4
Brown, P.O.5
-
7
-
-
0034076597
-
Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods
-
10630441
-
Harmsen HJ, Wildeboer-Veloo AC, Raangs GC, Wagendorp AA, Klijn N, Bindels JG, et al. Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods. J Pediatr Gastroenterol Nutr. 2000;30:61-67. PMID: 10630441
-
(2000)
J Pediatr Gastroenterol Nutr
, vol.30
, pp. 61-67
-
-
Harmsen, H.J.1
Wildeboer-Veloo, A.C.2
Raangs, G.C.3
Wagendorp, A.A.4
Klijn, N.5
Bindels, J.G.6
-
8
-
-
0033826695
-
Oligosaccharides in human milk: Structural, functional, and metabolic aspects
-
10940350
-
Kunz C, Rudloff S, Baier W, Klein N, Strobel S. Oligosaccharides in human milk: structural, functional, and metabolic aspects. Annu Rev Nutr. 2000;20:699-722. PMID: 10940350
-
(2000)
Annu Rev Nutr
, vol.20
, pp. 699-722
-
-
Kunz, C.1
Rudloff, S.2
Baier, W.3
Klein, N.4
Strobel, S.5
-
10
-
-
0034492052
-
Oligosaccharides and glycoconjugates in bovine milk and colostrum
-
11242449
-
Gopal PK, Gill HS. Oligosaccharides and glycoconjugates in bovine milk and colostrum. Br J Nutr. 2000;84 Suppl 1:S69-74. PMID: 11242449
-
(2000)
Br J Nutr
, vol.84
, pp. S69-S74
-
-
Gopal, P.K.1
Gill, H.S.2
-
11
-
-
0037645375
-
Sialyloligosaccharides in human and bovine milk and in infant formulas: Variations with the progression of lactation
-
12613848
-
Martin-Sosa S, Martin MJ, Garcia-Pardo LA, Hueso P. Sialyloligosaccharides in human and bovine milk and in infant formulas: variations with the progression of lactation. J Dairy Sci. 2003;86:52-59. PMID: 12613848
-
(2003)
J Dairy Sci.
, vol.86
, pp. 52-59
-
-
Martin-Sosa, S.1
Martin, M.J.2
Garcia-Pardo, L.A.3
Hueso, P.4
-
13
-
-
77949739705
-
Human milk oligosaccharides: Prebiotics and beyond
-
19906222
-
Bode L. Human milk oligosaccharides: prebiotics and beyond. Nutr Rev. 2009;67 Suppl 2:S183-91. doi: 10.1111/j.1753-4887.2009.00239.x PMID: 19906222
-
(2009)
Nutr Rev.
, vol.67
, pp. S183-S191
-
-
Bode, L.1
-
14
-
-
68149114497
-
Prebiotic supplementation in full-term neonates: A systematic review of randomized controlled trials
-
19652109
-
Rao S, Srinivasjois R, Patole S. Prebiotic supplementation in full-term neonates: a systematic review of randomized controlled trials. Arch Pediatr Adolesc Med. 2009;163:755-764. doi: 10.1001/archpediatrics.2009.94 PMID: 19652109
-
(2009)
Arch Pediatr Adolesc Med
, vol.163
, pp. 755-764
-
-
Rao, S.1
Srinivasjois, R.2
Patole, S.3
-
15
-
-
0029013322
-
Dietary modulation of the human colonic microbiota: Introducing the concept of prebiotics
-
7782892
-
Gibson GR, Roberfroid MB. Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. J Nutr. 1995;125:1401-1412. PMID: 7782892
-
(1995)
J Nutr
, vol.125
, pp. 1401-1412
-
-
Gibson, G.R.1
Roberfroid, M.B.2
-
16
-
-
0036085124
-
Gastrointestinal effects of prebiotics
-
12088511
-
Cummings JH, Macfarlane GT. Gastrointestinal effects of prebiotics. Br J Nutr. 2002;87 Suppl 2:S145-51. PMID: 12088511
-
(2002)
Br J Nutr
, vol.87
, pp. S145-S151
-
-
Cummings, J.H.1
Macfarlane, G.T.2
-
17
-
-
35848940262
-
Inulin-typefructans: Functional food ingredients
-
17951492
-
Roberfroid MB. Inulin-typefructans: functional food ingredients. J Nutr. 2007;137:2493S-2502S. PMID: 17951492
-
(2007)
J Nutr
, vol.137
, pp. 2493S-2502S
-
-
Roberfroid, M.B.1
-
18
-
-
58749105185
-
Inulin-type prebiotics-a review: Part 1
-
19152479
-
Kelly G. Inulin-type prebiotics-a review: part 1. Altern Med Rev. 2008;13:315-329. PMID: 19152479
-
(2008)
Altern Med Rev.
, vol.13
, pp. 315-329
-
-
Kelly, G.1
-
19
-
-
65349087351
-
Inulin-type prebiotics: A review. (Part 2)
-
19364192
-
Kelly G. Inulin-type prebiotics: a review. (Part 2). Altern Med Rev. 2009;14:36-55. PMID: 19364192
-
(2009)
Altern Med Rev.
, vol.14
, pp. 36-55
-
-
Kelly, G.1
-
20
-
-
0036255585
-
Supplementation of a bovine milk formula with an oligosaccharide mixture increases counts of faecal bifidobacteria in preterm infants
-
11978748
-
Boehm G, Lidestri M, Casetta P, Jelinek J, Negretti F, Stahl B, et al. Supplementation of a bovine milk formula with an oligosaccharide mixture increases counts of faecal bifidobacteria in preterm infants. Archives of Disease in Childhood-Fetal and Neonatal Edition. 2002;86:F178-F181. PMID: 11978748
-
(2002)
Archives of Disease in Childhood-fetal and Neonatal Edition
, vol.86
, pp. F178-F181
-
-
Boehm, G.1
Lidestri, M.2
Casetta, P.3
Jelinek, J.4
Negretti, F.5
Stahl, B.6
-
21
-
-
59949105102
-
Molecular ecological analysis of fecal bacterial populations from term infants fed formula supplemented with selected blends of prebiotics
-
19088307
-
Nakamura N, Gaskins HR, Collier CT, Nava GM, Rai D, Petschow B, et al. Molecular ecological analysis of fecal bacterial populations from term infants fed formula supplemented with selected blends of prebiotics. Appl Environ Microbiol. 2009;75:1121-1128. doi: 10.1128/AEM.02359-07 PMID: 19088307
-
(2009)
Appl Environ Microbiol.
, vol.75
, pp. 1121-1128
-
-
Nakamura, N.1
Gaskins, H.R.2
Collier, C.T.3
Nava, G.M.4
Rai, D.5
Petschow, B.6
-
22
-
-
79959242589
-
Physiological and bifidogenic effects of prebiotic supplements in infant formulae
-
21593649
-
Veereman-Wauters G, Staelens S, Van De Broek H, Plaskie K, Wesling F, Roger LC, et al. Physiological and bifidogenic effects of prebiotic supplements in infant formulae. J Pediatr Gastroenterol Nutr. 2011;52:763-771. doi: 10.1097/MPG.0b013e3182139f39 PMID: 21593649
-
(2011)
J Pediatr Gastroenterol Nutr
, vol.52
, pp. 763-771
-
-
Veereman-Wauters, G.1
Staelens, S.2
Van De Broek, H.3
Plaskie, K.4
Wesling, F.5
Roger, L.C.6
-
23
-
-
79960337311
-
A specific prebiotic mixture added to starting infant formula has long-lasting bifidogenic effects
-
21613452
-
Salvini F, Riva E, Salvatici E, Boehm G, Jelinek J, Banderali G, et al. A specific prebiotic mixture added to starting infant formula has long-lasting bifidogenic effects. J Nutr. 2011;141:1335-1339. doi: 10. 3945/jn. 110.136747 PMID: 21613452
-
(2011)
J Nutr
, vol.141
, pp. 1335-1339
-
-
Salvini, F.1
Riva, E.2
Salvatici, E.3
Boehm, G.4
Jelinek, J.5
Banderali, G.6
-
24
-
-
84855557816
-
Polydextrose enrichment of infant formula demonstrates prebiotic characteristics by altering intestinal microbiota, organic Acid concentrations, and cytokine expression in suckling piglets
-
22013198
-
Herfel TM, Jacobi SK, Lin X, Fellner V, Walker DC, Jouni ZE, et al. Polydextrose enrichment of infant formula demonstrates prebiotic characteristics by altering intestinal microbiota, organic Acid concentrations, and cytokine expression in suckling piglets. J Nutr. 2011;141:2139-2145. doi: 10.3945/jn. 111. 143727 PMID: 22013198
-
(2011)
J Nutr
, vol.141
, pp. 2139-2145
-
-
Herfel, T.M.1
Jacobi, S.K.2
Lin, X.3
Fellner, V.4
Walker, D.C.5
Jouni, Z.E.6
-
25
-
-
77954820449
-
Safety assessment of probiotics for human use
-
21327023
-
Sanders ME, Akkermans LM, Haller D, Hammerman C, Heimbach J, Hormannsperger G, et al. Safety assessment of probiotics for human use. Gut Microbes. 2010;1:164-185. doi: 10.4161/gmic.1.3. 12127 PMID: 21327023
-
(2010)
Gut Microbes
, vol.1
, pp. 164-185
-
-
Sanders, M.E.1
Akkermans, L.M.2
Haller, D.3
Hammerman, C.4
Heimbach, J.5
Hormannsperger, G.6
-
26
-
-
29844447075
-
Gut-trophic feed additives and their effects upon the gut structure and intestinal metabolism. State of the art in the pig, and perspectives towards humans
-
16372249
-
Domeneghini C, Di Giancamillo A, Arrighi S, Bosi G. Gut-trophic feed additives and their effects upon the gut structure and intestinal metabolism. State of the art in the pig, and perspectives towards humans. Histol Histopathol. 2006;21:273-283. PMID: 16372249
-
(2006)
Histol Histopathol.
, vol.21
, pp. 273-283
-
-
Domeneghini, C.1
Di Giancamillo, A.2
Arrighi, S.3
Bosi, G.4
-
27
-
-
84884796095
-
Invited Review: The preterm pig as a model in pediatric gastroenterology
-
23942716
-
Sangild PT, Thymann T, Schmidt M, Stoll B, Burrin DG, Buddington RK. Invited Review: The preterm pig as a model in pediatric gastroenterology. J AnimSci. 2013;91:4713-4729. doi: 10.2527/jas.2013-6359 PMID: 23942716
-
(2013)
J AnimSci.
, vol.91
, pp. 4713-4729
-
-
Sangild, P.T.1
Thymann, T.2
Schmidt, M.3
Stoll, B.4
Burrin, D.G.5
Buddington, R.K.6
-
28
-
-
84906248183
-
The suckling piglet as an agrimedical model for the study of pediatric nutrition and metabolism
-
25384150
-
Odle J, Lin X, Jacobi SK, Kim SW, Stahl CH. The suckling piglet as an agrimedical model for the study of pediatric nutrition and metabolism. Annu Rev Anim Biosci. 2014;2:419-444. doi: 10.1146/annurevanimal-022513-114158 PMID: 25384150
-
(2014)
Annu Rev Anim Biosci
, vol.2
, pp. 419-444
-
-
Odle, J.1
Lin, X.2
Jacobi, S.K.3
Kim, S.W.4
Stahl, C.H.5
-
29
-
-
0037445311
-
Effect of fermentable carbohydrates on piglet faecal bacterial communities as revealed by denaturing gradient gel electrophoresis analysis of 16S ribosomal DNA
-
19719683
-
Konstantinov SR, Zhu WY, Williams BA, Tamminga S, Vos WM, Akkermans AD. Effect of fermentable carbohydrates on piglet faecal bacterial communities as revealed by denaturing gradient gel electrophoresis analysis of 16S ribosomal DNA. FEMS Microbiol Ecol. 2003;43:225-235. doi: 10.1111/j. 1574-6941.2003.tb01062.x PMID: 19719683
-
(2003)
FEMS Microbiol Ecol.
, vol.43
, pp. 225-235
-
-
Konstantinov, S.R.1
Zhu, W.Y.2
Williams, B.A.3
Tamminga, S.4
Vos, W.M.5
Akkermans, A.D.6
-
30
-
-
3242757663
-
Specific response of a novel and abundant Lactobacillus amylovorus-like phylotype to dietary prebiotics in the guts of weaning piglets
-
15240251
-
Konstantinov SR, Awati A, Smidt H, Williams BA, Akkermans AD, De Vos WM. Specific response of a novel and abundant Lactobacillus amylovorus-like phylotype to dietary prebiotics in the guts of weaning piglets. Appl Environ Microbiol. 2004;70:3821-3830. PMID: 15240251
-
(2004)
Appl Environ Microbiol.
, vol.70
, pp. 3821-3830
-
-
Konstantinov, S.R.1
Awati, A.2
Smidt, H.3
Williams, B.A.4
Akkermans, A.D.5
De Vos, W.M.6
-
31
-
-
67349128597
-
Safety evaluation of polydextrose in infant formula using a suckling piglet model
-
19358872
-
Herfel TM, Jacobi SK, Lin X, Walker DC, Jouni ZE, Odle J. Safety evaluation of polydextrose in infant formula using a suckling piglet model. Food Chem Toxicol. 2009;47:1530-1537. doi: 10.1016/j.fct. 2009.03.039 PMID: 19358872
-
(2009)
Food Chem Toxicol.
, vol.47
, pp. 1530-1537
-
-
Herfel, T.M.1
Jacobi, S.K.2
Lin, X.3
Walker, D.C.4
Jouni, Z.E.5
Odle, J.6
-
32
-
-
79951675981
-
Addition of polydextrose and galactooligosaccharide to formula does not affect bacterial translocation in the neonatal piglet
-
21240011
-
Monaco MH, Kashtanov DO, Wang M, Walker DC, Rai D, Jouni ZE, et al. Addition of polydextrose and galactooligosaccharide to formula does not affect bacterial translocation in the neonatal piglet. J Pediatr Gastroenterol Nutr. 2011;52:210-216. doi: 10.1097/MPG.0b013e3181ffcaee PMID: 21240011
-
(2011)
J Pediatr Gastroenterol Nutr
, vol.52
, pp. 210-216
-
-
Monaco, M.H.1
Kashtanov, D.O.2
Wang, M.3
Walker, D.C.4
Rai, D.5
Jouni, Z.E.6
-
33
-
-
84861121977
-
Microbial composition and in vitro fermentation patterns of human milk oligosaccharides and prebiotics differ between formula-fed and sow-reared piglets
-
22399522
-
Li M, Bauer LL, Chen X, Wang M, Kuhlenschmidt TB, Kuhlenschmidt MS, et al. Microbial Composition and In Vitro Fermentation Patterns of Human Milk Oligosaccharides and Prebiotics Differ between Formula-Fed and Sow-Reared Piglets. J Nutr. 2012;142:681-689. doi: 10.3945/jn. 111.154427 PMID: 22399522
-
(2012)
J Nutr
, vol.142
, pp. 681-689
-
-
Li, M.1
Bauer, L.L.2
Chen, X.3
Wang, M.4
Kuhlenschmidt, T.B.5
Kuhlenschmidt, M.S.6
-
34
-
-
0030184648
-
Nutrient digestion by ileal cannulated dogs as affected by dietary fibers with various fermentation characteristics
-
8818810
-
Muir HE, Murray SM, Fahey GC Jr, Merchen NR, Reinhart GA. Nutrient digestion by ileal cannulated dogs as affected by dietary fibers with various fermentation characteristics. J Anim Sci. 1996;74:1641-1648. PMID: 8818810
-
(1996)
J Anim Sci.
, vol.74
, pp. 1641-1648
-
-
Muir, H.E.1
Murray, S.M.2
Fahey, G.C.3
Merchen, N.R.4
Reinhart, G.A.5
-
35
-
-
36549019564
-
Characterization of dominant cultivable lactobacilli and their antibiotic resistance profiles from faecal samples of weaning piglets
-
18045434
-
Korhonen JM, Sclivagnotis Y, Von Wright A. Characterization of dominant cultivable lactobacilli and their antibiotic resistance profiles from faecal samples of weaning piglets. J Appl Microbiol. 2007;103:2496-2503. PMID: 18045434
-
(2007)
J Appl Microbiol.
, vol.103
, pp. 2496-2503
-
-
Korhonen, J.M.1
Sclivagnotis, Y.2
Von Wright, A.3
-
36
-
-
37849048682
-
Lactobacillus strain diversity based on partial hsp60 gene sequences and design of PCR-restriction fragment length polymorphism assays for species identification and differentiation
-
17993558
-
Blaiotta G, Fusco V, Ercolini D, Aponte M, Pepe O, Villani F. Lactobacillus strain diversity based on partial hsp60 gene sequences and design of PCR-restriction fragment length polymorphism assays for species identification and differentiation. Appl Environ Microbiol. 2008;74:208-215. PMID: 17993558
-
(2008)
Appl Environ Microbiol.
, vol.74
, pp. 208-215
-
-
Blaiotta, G.1
Fusco, V.2
Ercolini, D.3
Aponte, M.4
Pepe, O.5
Villani, F.6
-
38
-
-
0008048504
-
Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses
-
2413450
-
Lane DJ, Pace B, Olsen GJ, Stahl DA, Sogin ML, Pace NR. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc Natl Acad Sci USA. 1985;82:6955-6959. PMID: 2413450
-
(1985)
Proc Natl Acad Sci USA
, vol.82
, pp. 6955-6959
-
-
Lane, D.J.1
Pace, B.2
Olsen, G.J.3
Stahl, D.A.4
Sogin, M.L.5
Pace, N.R.6
-
39
-
-
84871718932
-
Utilization of galactooligosaccharides by Bifidobacterium longum subsp. Infantis isolates
-
23200660
-
Garrido D, Ruiz-Moyano S, Jimenez-Espinoza R, Eom HJ, Block DE, Mills DA. Utilization of galactooligosaccharides by Bifidobacterium longum subsp. infantis isolates. Food Microbiol. 2013;33:262-270. doi: 10.1016/j.fm.2012.10.003 PMID: 23200660
-
(2013)
Food Microbiol.
, vol.33
, pp. 262-270
-
-
Garrido, D.1
Ruiz-Moyano, S.2
Jimenez-Espinoza, R.3
Eom, H.J.4
Block, D.E.5
Mills, D.A.6
-
40
-
-
70349678562
-
Low-level fructan supplementation of dogs enhances nutrient digestion and modifies stool metabolite concentrations, but does not alter fecal microbiota populations
-
19574565
-
Barry KA, Hernot DC, Middelbos IS, Francis C, Dunsford B, Swanson KS, et al. Low-level fructan supplementation of dogs enhances nutrient digestion and modifies stool metabolite concentrations, but does not alter fecal microbiota populations. J Anim Sci. 2009;87:3244-3252. doi: 10.2527/jas.2008-1659 PMID: 19574565
-
(2009)
J Anim Sci.
, vol.87
, pp. 3244-3252
-
-
Barry, K.A.1
Hernot, D.C.2
Middelbos, I.S.3
Francis, C.4
Dunsford, B.5
Swanson, K.S.6
-
41
-
-
2442510059
-
Improved extraction of PCR-quality community DNA from digesta and fecal samples
-
15152600
-
Yu Z, Morrison M. Improved extraction of PCR-quality community DNA from digesta and fecal samples. BioTechniques. 2004;36:808-812. PMID: 15152600
-
(2004)
BioTechniques
, vol.36
, pp. 808-812
-
-
Yu, Z.1
Morrison, M.2
-
42
-
-
33947413117
-
Development of a semiquantitative degenerate real-time pcr-based assay for estimation of numbers of butyryl-coenzyme A (CoA) CoA transferase genes in complex bacterial samples
-
17259367
-
Louis P, Flint HJ. Development of a semiquantitative degenerate real-time pcr-based assay for estimation of numbers of butyryl-coenzyme A (CoA) CoA transferase genes in complex bacterial samples. Appl Environ Microbiol. 2007;73:2009-2012. PMID: 17259367
-
(2007)
Appl Environ Microbiol.
, vol.73
, pp. 2009-2012
-
-
Louis, P.1
Flint, H.J.2
-
43
-
-
49949095159
-
Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: Bacterial diversity in the ileum of newly weaned Salmonella-infected pigs
-
18713063
-
Dowd SE, Sun Y, Wolcott RD, Domingo A, Carroll JA. Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonella-infected pigs. Foodborne Pathog Dis. 2008;5:459-472. doi: 10.1089/fpd.2008.0107 PMID: 18713063
-
(2008)
Foodborne Pathog Dis.
, vol.5
, pp. 459-472
-
-
Dowd, S.E.1
Sun, Y.2
Wolcott, R.D.3
Domingo, A.4
Carroll, J.A.5
-
44
-
-
79957465837
-
Bacterial diversity in Solenopsis invicta and Solenopsis geminata ant colonies characterized by 16S amplicon 454 pyrosequencing
-
21243351
-
Ishak HD, Plowes R, Sen R, Kellner K, Meyer E, Estrada DA, et al. Bacterial diversity in Solenopsis invicta and Solenopsis geminata ant colonies characterized by 16S amplicon 454 pyrosequencing. Microb Ecol. 2011;61:821-831. doi: 10.1007/s00248-010-9793-4 PMID: 21243351
-
(2011)
Microb Ecol.
, vol.61
, pp. 821-831
-
-
Ishak, H.D.1
Plowes, R.2
Sen, R.3
Kellner, K.4
Meyer, E.5
Estrada, D.A.6
-
46
-
-
78650575601
-
-
Warnes GR, Bolker B, Bonebakker L, Gentleman R, Liaw WHA, Lumley T, et al. gplots: Various R Programming Tools for Plotting Data. 2015;2.16.0.
-
Gplots: Various R Programming Tools for Plotting Data. 2015;2.16.0
-
-
Warnes, G.R.1
Bolker, B.2
Bonebakker, L.3
Gentleman, R.4
Liaw, W.H.A.5
Lumley, T.6
-
47
-
-
70349255569
-
-
R package version 1.17-8
-
Oksanen J, Blanchet FG, Kindt R, Legendre PO, R. B., Simpson GL, Solymos P, et al. vegan: Community Ecology Package. 2011; R package version 1.17-8.
-
(2011)
Vegan: Community Ecology Package
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.O.4
Simpson, G.L.5
Solymos, P.6
-
49
-
-
29144464937
-
UniFrac: A new phylogenetic method for comparing microbial communities
-
16332807
-
Lozupone C, Knight R. UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol. 2005;71:8228-8235. PMID: 16332807
-
(2005)
Appl Environ Microbiol.
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
50
-
-
77952243141
-
QIIMEallows analysis of high-throughput community sequencing data
-
20383131
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, et al. QIIMEallows analysis of high-throughput community sequencing data. Nat Methods. 2010;7:335-336. doi: 10. 1038/nmeth.f.303 PMID: 20383131
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
52
-
-
0031284508
-
Species assemblages and indicator species: The need for a flexible asymmetrical approach
-
Dufrene M, Legendre P. Species assemblages and indicator species: the need for a flexible asymmetrical approach. Ecol Monogr. 1997;67:345-345-366.
-
(1997)
Ecol Monogr
, vol.67
, pp. 345-345366
-
-
Dufrene, M.1
Legendre, P.2
-
53
-
-
33847709441
-
Term infants fed formula supplemented with selected blends of prebiotics grow normally and have soft stools similar to those reported for breast-fed infants
-
17325558
-
Ziegler E, Vanderhoof JA, Petschow B, Mitmesser SH, Stolz SI, Harris CL, et al. Term infants fed formula supplemented with selected blends of prebiotics grow normally and have soft stools similar to those reported for breast-fed infants. J Pediatr Gastroenterol Nutr. 2007;44:359-364. PMID: 17325558
-
(2007)
J Pediatr Gastroenterol Nutr
, vol.44
, pp. 359-364
-
-
Ziegler, E.1
Vanderhoof, J.A.2
Petschow, B.3
Mitmesser, S.H.4
Stolz, S.I.5
Harris, C.L.6
-
54
-
-
78649520016
-
A dose dependent impact of prebiotic galactooligosaccharideson the intestinal microbiota of healthy adults
-
21059476
-
Davis LM, Martinez I, Walter J, Hutkins R. A dose dependent impact of prebiotic galactooligosaccharideson the intestinal microbiota of healthy adults. Int J Food Microbiol. 2010;144:285-292. doi: 10. 1016/j.ijfoodmicro.2010.10.007 PMID: 21059476
-
(2010)
Int J Food Microbiol.
, vol.144
, pp. 285-292
-
-
Davis, L.M.1
Martinez, I.2
Walter, J.3
Hutkins, R.4
-
55
-
-
80053150201
-
Barcoded pyrosequencing reveals that consumption of galactooligosaccharides results in a highly specific bifidogenic response in humans
-
21966454
-
Davis LM, Martinez I, Walter J, Goin C, Hutkins RW. Barcoded pyrosequencing reveals that consumption of galactooligosaccharides results in a highly specific bifidogenic response in humans. PLoS One. 2011;6:e25200. doi: 10.1371/journal.pone.0025200 PMID: 21966454
-
(2011)
PLoS One
, vol.6
, pp. e25200
-
-
Davis, L.M.1
Martinez, I.2
Walter, J.3
Goin, C.4
Hutkins, R.W.5
-
56
-
-
84942886359
-
Stool pattern changes in toddlers consuming a follow-on formula supplemented with a prebiotic blend of polydextrose (PDX) and galactooligosaccharides (GOS)
-
Ribeiro TC, Costa-Ribeiro H Jr, Almeida PS, Pontes MV, Leite ME, Filadelfo LR, et al. Stool Pattern Changes in Toddlers Consuming a Follow-on Formula Supplemented with a Prebiotic Blend of Polydextrose (PDX) and Galactooligosaccharides (GOS). J Pediatr Gastroenterol Nutr. 2011.
-
(2011)
J Pediatr Gastroenterol Nutr
-
-
Ribeiro, T.C.1
Costa-Ribeiro, H.2
Almeida, P.S.3
Pontes, M.V.4
Leite, M.E.5
Filadelfo, L.R.6
-
57
-
-
84857791944
-
New prebiotic blend of polydextrose and galacto-oligosaccharides has a bifidogenic effect in young infants
-
21946836
-
Scalabrin DM, Mitmesser SH, Welling GW, Harris CL, Marunycz JD, Walker DC, et al. New prebiotic blend of polydextrose and galacto-oligosaccharides has a bifidogenic effect in young infants. J Pediatr Gastroenterol Nutr. 2012;54:343-352. doi: 10.1097/MPG.0b013e318237ed95 PMID: 21946836
-
(2012)
J Pediatr Gastroenterol Nutr
, vol.54
, pp. 343-352
-
-
Scalabrin, D.M.1
Mitmesser, S.H.2
Welling, G.W.3
Harris, C.L.4
Marunycz, J.D.5
Walker, D.C.6
-
58
-
-
0034959553
-
Short-chain fatty acids and human colonic function: Roles of resistant starch and nonstarch polysaccharides
-
11427691
-
Topping DL, Clifton PM. Short-chain fatty acids and human colonic function: roles of resistant starch and nonstarch polysaccharides. Physiol Rev. 2001;81:1031-1064. PMID: 11427691
-
(2001)
Physiol Rev.
, vol.81
, pp. 1031-1064
-
-
Topping, D.L.1
Clifton, P.M.2
-
59
-
-
79951963397
-
Dietary oligosaccharides increase colonic weight and the amount but not concentration of bacterially synthesized folate in the colon of piglets
-
21270368
-
Aufreiter S, Kim JH, O'Connor DL. Dietary oligosaccharides increase colonic weight and the amount but not concentration of bacterially synthesized folate in the colon of piglets. J Nutr. 2011;141:366-372. doi: 10.3945/jn. 110.135343 PMID: 21270368
-
(2011)
J Nutr
, vol.141
, pp. 366-372
-
-
Aufreiter, S.1
Kim, J.H.2
O'Connor, D.L.3
-
60
-
-
0036265580
-
Intestinal microflora of human infants and current trends for its nutritional modulation
-
12010580
-
Mountzouris KC, McCartney AL, Gibson GR. Intestinal microflora of human infants and current trends for its nutritional modulation. Br J Nutr. 2002;87:405-420. PMID: 12010580
-
(2002)
Br J Nutr
, vol.87
, pp. 405-420
-
-
Mountzouris, K.C.1
McCartney, A.L.2
Gibson, G.R.3
-
61
-
-
65449159712
-
The relationship between intestinal microbiota and the central nervous system in normal gastrointestinal function and disease
-
19457424
-
Collins SM, Bercik P. The relationship between intestinal microbiota and the central nervous system in normal gastrointestinal function and disease. Gastroenterology. 2009;136:2003-2014. doi: 10.1053/j. gastro.2009.01.075 PMID: 19457424
-
(2009)
Gastroenterology
, vol.136
, pp. 2003-2014
-
-
Collins, S.M.1
Bercik, P.2
-
62
-
-
46749145764
-
The immediate environment during postnatal development has long-term impact on gut community structure in pigs
-
18356821
-
Thompson CL, Wang B, Holmes AJ. The immediate environment during postnatal development has long-term impact on gut community structure in pigs. ISME J. 2008;2:739-748. doi: 10.1038/ismej. 2008.29 PMID: 18356821
-
(2008)
ISME J
, vol.2
, pp. 739-748
-
-
Thompson, C.L.1
Wang, B.2
Holmes, A.J.3
-
63
-
-
79953731940
-
A closer look at bacteroides: Phylogenetic relationship and genomic implications of a life in the human gut
-
21222211
-
Karlsson FH, Ussery DW, Nielsen J, Nookaew I. A closer look at bacteroides: phylogenetic relationship and genomic implications of a life in the human gut. Microb Ecol. 2011;61:473-485. doi: 10.1007/s00248-010-9796-1 PMID: 21222211
-
(2011)
Microb Ecol.
, vol.61
, pp. 473-485
-
-
Karlsson, F.H.1
Ussery, D.W.2
Nielsen, J.3
Nookaew, I.4
-
64
-
-
78649734540
-
Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects
-
21151493
-
Martinez I, Kim J, Duffy PR, Schlegel VL, Walter J. Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects. PLoSOne. 2010;5:e15046. doi: 10.1371/journal.pone.0015046 PMID: 21151493
-
(2010)
PLoSOne
, vol.5
, pp. e15046
-
-
Martinez, I.1
Kim, J.2
Duffy, P.R.3
Schlegel, V.L.4
Walter, J.5
-
65
-
-
50049098340
-
Ecological role of lactobacilli in the gastrointestinal tract: Implications for fundamental and biomedical research
-
18539818
-
Walter J. Ecological role of lactobacilli in the gastrointestinal tract: implications for fundamental and biomedical research. Appl Environ Microbiol. 2008;74:4985-4996. doi: 10.1128/AEM.00753-08 PMID: 18539818
-
(2008)
Appl Environ Microbiol.
, vol.74
, pp. 4985-4996
-
-
Walter, J.1
-
66
-
-
67349112373
-
Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model
-
19225551
-
Roesch LF, Lorca GL, Casella G, Giongo A, Naranjo A, Pionzio AM, et al. Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model. ISME J. 2009;3:536-548. doi: 10.1038/ismej.2009.5 PMID: 19225551
-
(2009)
ISME J
, vol.3
, pp. 536-548
-
-
Roesch, L.F.1
Lorca, G.L.2
Casella, G.3
Giongo, A.4
Naranjo, A.5
Pionzio, A.M.6
-
67
-
-
77956409750
-
Lactobacillus johnsonii N6.2 mitigates the development of type 1 diabetes in BB-DP rats
-
20463897
-
Valladares R, Sankar D, Li N, Williams E, Lai KK, Abdelgeliel AS, et al. Lactobacillus johnsonii N6.2 mitigates the development of type 1 diabetes in BB-DP rats. PLoS One. 2010;5:e10507. doi: 10.1371/journal.pone.0010507 PMID: 20463897
-
(2010)
PLoS One
, vol.5
, pp. e10507
-
-
Valladares, R.1
Sankar, D.2
Li, N.3
Williams, E.4
Lai, K.K.5
Abdelgeliel, A.S.6
-
68
-
-
79958235334
-
Lactobacillus johnsonii N6.2 stimulates the innate immune response through Toll-like receptor 9 in Caco-2 cells and increases intestinal crypt Paneth cell number in biobreeding diabetes-prone rats
-
21490291
-
Kingma SD, Li N, Sun F, Valladares RB, Neu J, Lorca GL. Lactobacillus johnsonii N6.2 stimulates the innate immune response through Toll-like receptor 9 in Caco-2 cells and increases intestinal crypt Paneth cell number in biobreeding diabetes-prone rats. J Nutr. 2011;141:1023-1028. doi: 10.3945/jn. 110.135517 PMID: 21490291
-
(2011)
J Nutr
, vol.141
, pp. 1023-1028
-
-
Kingma, S.D.1
Li, N.2
Sun, F.3
Valladares, R.B.4
Neu, J.5
Lorca, G.L.6
-
69
-
-
79953193748
-
Inhibition of type 1 diabetes correlated to a Lactobacillus johnsonii N6.2-mediatedTh17 bias
-
21317395
-
Lau K, Benitez P, Ardissone A, Wilson TD, Collins EL, Lorca G, et al. Inhibition of type 1 diabetes correlated to a Lactobacillus johnsonii N6.2-mediatedTh17 bias. J Immunol. 2011;186:3538-3546. doi: 10. 4049/jimmunol.1001864 PMID: 21317395
-
(2011)
J Immunol.
, vol.186
, pp. 3538-3546
-
-
Lau, K.1
Benitez, P.2
Ardissone, A.3
Wilson, T.D.4
Collins, E.L.5
Lorca, G.6
-
70
-
-
84875718828
-
Lactobacillus johnsonii inhibits indoleamine 2, 3-dioxygenase and alters tryptophan metabolite levels in BioBreeding rats
-
23303207
-
Valladares R, Bojilova L, Potts AH, Cameron E, Gardner C, Lorca G, et al. Lactobacillus johnsonii inhibits indoleamine 2, 3-dioxygenase and alters tryptophan metabolite levels in BioBreeding rats. FASEB J. 2013;27:1711-1720. doi: 10.1096/fj.12-223339 PMID: 23303207
-
(2013)
FASEB J
, vol.27
, pp. 1711-1720
-
-
Valladares, R.1
Bojilova, L.2
Potts, A.H.3
Cameron, E.4
Gardner, C.5
Lorca, G.6
-
71
-
-
80051811219
-
The effect of Lactobacillus johnsonii Ncc533 (La1) on the balance of Th1/Th2 cells in BALB/c mice
-
21810385
-
Yang J, Li W, Sun R, Li B. The effect of Lactobacillus johnsonii Ncc533 (La1) on the balance of Th1/Th2 cells in BALB/c mice. Clin Invest Med. 2011;34:E254. PMID: 21810385
-
(2011)
Clin Invest Med
, vol.34
, pp. E254
-
-
Yang, J.1
Li, W.2
Sun, R.3
Li, B.4
-
73
-
-
0022544586
-
Protein degradation by human intestinal bacteria
-
3543210
-
Macfarlane GT, Cummings JH, Allison C. Protein degradation by human intestinal bacteria. J Gen Microbiol. 1986;132:1647-1656. PMID: 3543210
-
(1986)
J Gen Microbiol.
, vol.132
, pp. 1647-1656
-
-
Macfarlane, G.T.1
Cummings, J.H.2
Allison, C.3
-
74
-
-
0026652318
-
Estimation of short-chain fatty acid production from protein by human intestinal bacteria based on branched-chain fatty acid measurements
-
Macfarlane GT, Gibson GR, Beatty E, Cummings JH. Estimation of short-chain fatty acid production from protein by human intestinal bacteria based on branched-chain fatty acid measurements. FEMS Microbiol Lett. 1992;101:81-88.
-
(1992)
FEMS Microbiol Lett
, vol.101
, pp. 81-88
-
-
Macfarlane, G.T.1
Gibson, G.R.2
Beatty, E.3
Cummings, J.H.4
-
75
-
-
2342507756
-
Dietary galactooligosaccharides affect ileal and total-tract nutrient digestibility, ileal and fecal bacterial concentrations, and ileal fermentative characteristics of growing pigs
-
14552381
-
Smiricky-Tjardes MR, Grieshop CM, Flickinger EA, Bauer LL, Fahey GC Jr. Dietary galactooligosaccharides affect ileal and total-tract nutrient digestibility, ileal and fecal bacterial concentrations, and ileal fermentative characteristics of growing pigs. J AnimSci. 2003;81:2535-2545. PMID: 14552381
-
(2003)
J AnimSci.
, vol.81
, pp. 2535-2545
-
-
Smiricky-Tjardes, M.R.1
Grieshop, C.M.2
Flickinger, E.A.3
Bauer, L.L.4
Fahey, G.C.5
-
76
-
-
34547978905
-
Effect of polydextrose on intestinal microbes and immune functions in pigs
-
17391567
-
Fava F, Makivuokko H, Siljander-Rasi H, Putaala H, Tiihonen K, Stowell J, et al. Effect of polydextrose on intestinal microbes and immune functions in pigs. Br J Nutr. 2007;98:123-133. PMID: 17391567
-
(2007)
Br J Nutr
, vol.98
, pp. 123-133
-
-
Fava, F.1
Makivuokko, H.2
Siljander-Rasi, H.3
Putaala, H.4
Tiihonen, K.5
Stowell, J.6
-
77
-
-
84878250519
-
Mode of delivery and early nutrition modulate microbial colonization and fermentation products in neonatal piglets
-
23616518
-
Wang M, Radlowski EC, Monaco MH, Fahey GC Jr, Gaskins HR, Donovan SM. Mode of delivery and early nutrition modulate microbial colonization and fermentation products in neonatal piglets. J Nutr. 2013;143:795-803. doi: 10.3945/jn. 112.173096 PMID: 23616518
-
(2013)
J Nutr
, vol.143
, pp. 795-803
-
-
Wang, M.1
Radlowski, E.C.2
Monaco, M.H.3
Fahey, G.C.4
Gaskins, H.R.5
Donovan, S.M.6
|