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Volumn 84, Issue 2, 2003, Pages 511-525

Canonical analysis of principal coordinates: A useful method of constrained ordination for ecology

Author keywords

Canonical ordination; Classification; Community structure; Distance matrix; MDS; Multivariate analysis; Principal coordinate analysis; Species abundances; Statistical methods

Indexed keywords

CANONICAL ANALYSIS; MULTIVARIATE ANALYSIS; ORDINATION;

EID: 0042815050     PISSN: 00129658     EISSN: None     Source Type: Journal    
DOI: 10.1890/0012-9658(2003)084[0511:CAOPCA]2.0.CO;2     Document Type: Article
Times cited : (2066)

References (51)
  • 1
    • 0002154022 scopus 로고    scopus 로고
    • A new method for non-parametric multivariate analysis of variance
    • Anderson, M. J. 2001a. A new method for non-parametric multivariate analysis of variance. Austral Ecology 26:32-46.
    • (2001) Austral Ecology , vol.26 , pp. 32-46
    • Anderson, M.J.1
  • 2
    • 0035056250 scopus 로고    scopus 로고
    • Permutation tests for univariate or multivariate analysis of variance and regression
    • Anderson, M. J. 2001b. Permutation tests for univariate or multivariate analysis of variance and regression. Canadian Journal of Fisheries and Aquatic Sciences 58:626-639.
    • (2001) Canadian Journal of Fisheries and Aquatic Sciences , vol.58 , pp. 626-639
    • Anderson, M.J.1
  • 5
    • 0041320287 scopus 로고
    • A model and algorithm for multidimensional scaling with external constraints on the distances
    • Borg, I., and J. C. Lingoes. 1980. A model and algorithm for multidimensional scaling with external constraints on the distances. Psychometrika 45:25-38.
    • (1980) Psychometrika , vol.45 , pp. 25-38
    • Borg, I.1    Lingoes, J.C.2
  • 6
    • 0000286531 scopus 로고
    • An ordination of the upland forest communities of southern Wisconsin
    • Bray, J. R., and J. T. Curtis. 1957. An ordination of the upland forest communities of southern Wisconsin. Ecological Monographs 27:325-349.
    • (1957) Ecological Monographs , vol.27 , pp. 325-349
    • Bray, J.R.1    Curtis, J.T.2
  • 7
    • 0031013467 scopus 로고    scopus 로고
    • Similarity measure bias in river benthic Aufwuchs community analysis
    • Cao, Y., P. Williams, and A. W. Bark. 1997. Similarity measure bias in river benthic Aufwuchs community analysis. Water Environment Research 69:95-106.
    • (1997) Water Environment Research , vol.69 , pp. 95-106
    • Cao, Y.1    Williams, P.2    Bark, A.W.3
  • 8
    • 0027804103 scopus 로고
    • Nonparametric multivariate analyses of changes in community structure
    • Clarke, K. R. 1993. Nonparametric multivariate analyses of changes in community structure. Australian Journal of Ecology 18:117-143.
    • (1993) Australian Journal of Ecology , vol.18 , pp. 117-143
    • Clarke, K.R.1
  • 9
    • 0027806622 scopus 로고
    • A method of linking multivariate community structure to environmental variables
    • Clarke, K. R., and M. Ainsworth. 1993. A method of linking multivariate community structure to environmental variables. Marine Ecology Progress Series 92:205-219.
    • (1993) Marine Ecology Progress Series , vol.92 , pp. 205-219
    • Clarke, K.R.1    Ainsworth, M.2
  • 10
    • 0031530380 scopus 로고    scopus 로고
    • The proximity of an individual to a population with applications in discriminant analysis
    • Cuadras, C. M., J. Fortiana, and F. Oliva. 1997. The proximity of an individual to a population with applications in discriminant analysis. Journal of Classification 14:117-136.
    • (1997) Journal of Classification , vol.14 , pp. 117-136
    • Cuadras, C.M.1    Fortiana, J.2    Oliva, F.3
  • 11
    • 0001995898 scopus 로고
    • Ordination between- and within-groups applied to soil classification
    • D. F. Merriam, editor. Syracuse University Geology Contributions, Syracuse, New York, USA
    • Digby, P. G. N., and J. C. Gower. 1981. Ordination between- and within-groups applied to soil classification. Pages 63-75 in D. F. Merriam, editor. Down to earth statistics: solutions looking for geological problems. Syracuse University Geology Contributions, Syracuse, New York, USA.
    • (1981) Down to Earth Statistics: Solutions Looking for Geological Problems , pp. 63-75
    • Digby, P.G.N.1    Gower, J.C.2
  • 12
    • 0031284508 scopus 로고    scopus 로고
    • Species assemblages and indicator species: The need for a flexible asymmetrical approach
    • Dufrêne, M., and P. Legendre. 1997. Species assemblages and indicator species: the need for a flexible asymmetrical approach. Ecological Monographs 67:345-366.
    • (1997) Ecological Monographs , vol.67 , pp. 345-366
    • Dufrêne, M.1    Legendre, P.2
  • 13
    • 0002344794 scopus 로고
    • Bootstrap methods: Another look at the jack-knife
    • Efron, B. 1979. Bootstrap methods: another look at the jack-knife. Annals of Statistics 7:1-26.
    • (1979) Annals of Statistics , vol.7 , pp. 1-26
    • Efron, B.1
  • 14
    • 0023486365 scopus 로고
    • Compositional dissimilarity as a robust measure of ecological distance
    • Faith, D. P., P. R. Minchin, and L. Belbin. 1987. Compositional dissimilarity as a robust measure of ecological distance. Vegetatio 69:57-68.
    • (1987) Vegetatio , vol.69 , pp. 57-68
    • Faith, D.P.1    Minchin, P.R.2    Belbin, L.3
  • 15
    • 0002963220 scopus 로고
    • A practical strategy for analysing multispecies distribution patterns
    • Field, J. G., K. R. Clarke, and R. M. Warwick. 1982. A practical strategy for analysing multispecies distribution patterns. Marine Ecology Progress Series 8:37-52.
    • (1982) Marine Ecology Progress Series , vol.8 , pp. 37-52
    • Field, J.G.1    Clarke, K.R.2    Warwick, R.M.3
  • 16
    • 0000764772 scopus 로고
    • The use of multiple measurements in taxonomic problems
    • Fisher, R. A. 1936. The use of multiple measurements in taxonomic problems. Annals of Eugenics 7:179-188.
    • (1936) Annals of Eugenics , vol.7 , pp. 179-188
    • Fisher, R.A.1
  • 18
    • 0000071395 scopus 로고
    • Some distance properties of latent root and vector methods used in multivariate analysis
    • Gower, J. C. 1966a. Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika 53:325-338.
    • (1966) Biometrika , vol.53 , pp. 325-338
    • Gower, J.C.1
  • 19
    • 0039200863 scopus 로고
    • A Q-technique for the calculation of canonical variates
    • Gower, J. C. 1966b. A Q-technique for the calculation of canonical variates. Biometrika 53:588-590.
    • (1966) Biometrika , vol.53 , pp. 588-590
    • Gower, J.C.1
  • 20
    • 0000457927 scopus 로고
    • Adding a point to vector diagrams in multivariate analysis
    • Gower, J. C. 1968. Adding a point to vector diagrams in multivariate analysis. Biometrika 55:582-585.
    • (1968) Biometrika , vol.55 , pp. 582-585
    • Gower, J.C.1
  • 21
    • 0042321818 scopus 로고
    • Analyzing rectangular tables by joint and constrained multidimensional scaling
    • Heiser, W. J., and J. J. Meulman. 1983. Analyzing rectangular tables by joint and constrained multidimensional scaling. Journal of Econometrics 22:139-167.
    • (1983) Journal of Econometrics , vol.22 , pp. 139-167
    • Heiser, W.J.1    Meulman, J.J.2
  • 22
    • 0011696825 scopus 로고
    • Factorization of the residual operator and canonical decomposition of non-orthogonal factors in the analysis of variance
    • James, A. T, and G. N. Wilkinson. 1971. Factorization of the residual operator and canonical decomposition of non-orthogonal factors in the analysis of variance. Biometrika 58:279-294.
    • (1971) Biometrika , vol.58 , pp. 279-294
    • James, A.T.1    Wilkinson, G.N.2
  • 23
    • 0022847664 scopus 로고
    • Applying metric and nonmetric multidimensional scaling to ecological studies: Some new results
    • Kenkel, N. C., and L. Orlóci. 1986. Applying metric and nonmetric multidimensional scaling to ecological studies: some new results. Ecology 67:919-928.
    • (1986) Ecology , vol.67 , pp. 919-928
    • Kenkel, N.C.1    Orlóci, L.2
  • 24
    • 0041654220 scopus 로고
    • Multidimensional scaling by optimizing a goodness of fit to a nonmetric hypothesis
    • Kruskal, J. B. 1964. Multidimensional scaling by optimizing a goodness of fit to a nonmetric hypothesis. Psychometrika 29:1-28.
    • (1964) Psychometrika , vol.29 , pp. 1-28
    • Kruskal, J.B.1
  • 26
    • 84879799188 scopus 로고
    • Estimation of error rates in discriminant analysis
    • Lachenbruch, P. A., and M. R. Mickey. 1968. Estimation of error rates in discriminant analysis. Technometrics 10:1-11.
    • (1968) Technometrics , vol.10 , pp. 1-11
    • Lachenbruch, P.A.1    Mickey, M.R.2
  • 27
    • 0032967877 scopus 로고    scopus 로고
    • Distance-based redundancy analysis: Testing multispecies responses in multifactorial ecological experiments
    • Legendre, P., and M. J. Anderson. 1999. Distance-based redundancy analysis: testing multispecies responses in multifactorial ecological experiments. Ecological Monographs 69:1-24.
    • (1999) Ecological Monographs , vol.69 , pp. 1-24
    • Legendre, P.1    Anderson, M.J.2
  • 28
    • 0034782218 scopus 로고    scopus 로고
    • Ecologically meaningful transformations for ordination of species data
    • Legendre, P., and E. D. Gallagher. 2001. Ecologically meaningful transformations for ordination of species data. Oecologia 129:271-280.
    • (2001) Oecologia , vol.129 , pp. 271-280
    • Legendre, P.1    Gallagher, E.D.2
  • 30
    • 0012173648 scopus 로고    scopus 로고
    • Nonlinear redundancy analysis and canonical correspondence analysis based on polynomial regression
    • Makarenkov, V., and P. Legendre. 2002. Nonlinear redundancy analysis and canonical correspondence analysis based on polynomial regression. Ecology 83:1146-1161.
    • (2002) Ecology , vol.83 , pp. 1146-1161
    • Makarenkov, V.1    Legendre, P.2
  • 32
    • 0035133496 scopus 로고    scopus 로고
    • Fitting multivariate models to community data: A comment on distance-based redundancy analysis
    • McArdle, B. H., and M. J. Anderson. 2001. Fitting multivariate models to community data: a comment on distance-based redundancy analysis. Ecology 82:290-297.
    • (2001) Ecology , vol.82 , pp. 290-297
    • McArdle, B.H.1    Anderson, M.J.2
  • 34
    • 0041320292 scopus 로고
    • Nonlinear redundancy analysis via distances
    • H. H. Bock, editor. Elsevier Science BV, Amsterdam, The Netherlands
    • Meulman, J. J. 1988. Nonlinear redundancy analysis via distances. Pages 515-522 in H. H. Bock, editor. Classification and related methods. Elsevier Science BV, Amsterdam, The Netherlands.
    • (1988) Classification and Related Methods , pp. 515-522
    • Meulman, J.J.1
  • 35
    • 21144473513 scopus 로고
    • The integration of multidimensional scaling and multivariate analysis with optimal transformations
    • Meulman, J. J. 1992. The integration of multidimensional scaling and multivariate analysis with optimal transformations. Psychometrika 57:539-565.
    • (1992) Psychometrika , vol.57 , pp. 539-565
    • Meulman, J.J.1
  • 36
  • 38
    • 0023519385 scopus 로고
    • An evaluation of the relative robustness of techniques for ecological ordination
    • Minchin, P. R. 1987. An evaluation of the relative robustness of techniques for ecological ordination. Vegetatio 69:89-107.
    • (1987) Vegetatio , vol.69 , pp. 89-107
    • Minchin, P.R.1
  • 40
    • 0027332774 scopus 로고
    • Putting things in even better order: The advantages of canonical correspondence analysis
    • Palmer, M. W. 1993. Putting things in even better order: the advantages of canonical correspondence analysis. Ecology 74:2215-2230.
    • (1993) Ecology , vol.74 , pp. 2215-2230
    • Palmer, M.W.1
  • 41
    • 0000442911 scopus 로고
    • The use and interpretation of principal component analysis in applied research
    • Rao, C. R. 1964. The use and interpretation of principal component analysis in applied research. Sankhya A 26:329-358.
    • (1964) Sankhya A , vol.26 , pp. 329-358
    • Rao, C.R.1
  • 43
    • 34250926052 scopus 로고
    • The analysis of proximities: Multidimensional scaling with an unknown distance function. Parts I and II
    • Shepard, R. N. 1962. The analysis of proximities: multidimensional scaling with an unknown distance function. Parts I and II. Psychometrika 27:125-140,219-246.
    • (1962) Psychometrika , vol.27 , pp. 125-140
    • Shepard, R.N.1
  • 44
    • 0023482416 scopus 로고
    • The analysis of vegetation-environment relationships by canonical correspondence analysis
    • ter Braak, C. J. F. 1986a. The analysis of vegetation-environment relationships by canonical correspondence analysis. Vegetatio 69:69-77.
    • (1986) Vegetatio , vol.69 , pp. 69-77
    • Ter Braak, C.J.F.1
  • 45
    • 0022843649 scopus 로고
    • Canonical correspondence analysis: A new eigenvector technique for multivariate direct gradient analysis
    • ter Braak, C. J. F. 1986b. Canonical correspondence analysis: a new eigenvector technique for multivariate direct gradient analysis. Ecology 67:1167-1179.
    • (1986) Ecology , vol.67 , pp. 1167-1179
    • Ter Braak, C.J.F.1
  • 46
    • 0041320291 scopus 로고
    • Multidimensional scaling and regression
    • ter Braak, C. J. F. 1992. Multidimensional scaling and regression. Statistica Applicata 4:577-586.
    • (1992) Statistica Applicata , vol.4 , pp. 577-586
    • Ter Braak, C.J.F.1
  • 47
    • 0002521330 scopus 로고
    • Ordination
    • R. H. G. Jongman, C. J. F. ter Braak, and O. F. R. van Tongeren, editors. Cambridge University Press, Cambridge, UK
    • ter Braak, C. J. F. 1995. Ordination. Pages 91-173 in R. H. G. Jongman, C. J. F. ter Braak, and O. F. R. van Tongeren, editors. Data analysis in community and landscape ecology. Second edition. Cambridge University Press, Cambridge, UK.
    • (1995) Data Analysis in Community and Landscape Ecology. Second Edition , pp. 91-173
    • Ter Braak, C.J.F.1
  • 49
    • 0020896837 scopus 로고
    • Some observations of the use of discriminant analysis in ecology
    • Williams, B. K. 1983. Some observations of the use of discriminant analysis in ecology. Ecology 64:1283-1291.
    • (1983) Ecology , vol.64 , pp. 1283-1291
    • Williams, B.K.1
  • 50
    • 0024185980 scopus 로고
    • Assessment of sampling stability in ecological applications of discriminant analysis
    • Williams, B. K., and K. Titus. 1988. Assessment of sampling stability in ecological applications of discriminant analysis. Ecology 69:1275-1285.
    • (1988) Ecology , vol.69 , pp. 1275-1285
    • Williams, B.K.1    Titus, K.2
  • 51
    • 0042321815 scopus 로고    scopus 로고
    • Report to the Department of Conservation, Research Grant No. 2519, Leigh Marine Laboratory, University of Auckland, Auckland, New Zealand
    • Willis, T. J., and C. M. Denny. 2000. Effects of Poor Knights Islands Marine Reserve on demersal fish populations. Report to the Department of Conservation, Research Grant No. 2519, Leigh Marine Laboratory, University of Auckland, Auckland, New Zealand.
    • (2000) Effects of Poor Knights Islands Marine Reserve on Demersal Fish Populations
    • Willis, T.J.1    Denny, C.M.2


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