-
1
-
-
84857499706
-
Role of transgenic plants in agriculture and biopharming
-
Ahmad, P., Ashraf, M., Younis, M., Hu, X., Kumar, A., Akram, N. A., et al. (2012). Role of transgenic plants in agriculture and biopharming. Biotechnol. Adv. 30, 524-540. doi: 10.1016/j.biotechadv.2011.09.006
-
(2012)
Biotechnol. Adv
, vol.30
, pp. 524-540
-
-
Ahmad, P.1
Ashraf, M.2
Younis, M.3
Hu, X.4
Kumar, A.5
Akram, N.A.6
-
2
-
-
0027661013
-
Epigenetic repeat-induced gene silencing (RIGS) in Arabidopsis
-
Assaad, F. F., Tucker, K. L., and Signer, E. R. (1993). Epigenetic repeat-induced gene silencing (RIGS) in Arabidopsis. Plant Mol. Biol. 22, 1067-1085. doi: 10.1007/BF00028978
-
(1993)
Plant Mol. Biol
, vol.22
, pp. 1067-1085
-
-
Assaad, F.F.1
Tucker, K.L.2
Signer, E.R.3
-
3
-
-
0030267493
-
RNA as a target and an initiator of posttranscriptional gene silencing in transgenic plants
-
Baulcombe, D. C. (1996). RNA as a target and an initiator of posttranscriptional gene silencing in transgenic plants. Plant Mol. Biol. 32, 79-88. doi: 10.1007/BF00039378
-
(1996)
Plant Mol. Biol
, vol.32
, pp. 79-88
-
-
Baulcombe, D.C.1
-
4
-
-
0037117416
-
A branched pathway for transgene - Induced RNA silencing in plants
-
Beclin, C., Boutet, S., Waterhouse, P., and Vaucheret, H. (2002). A branched pathway for transgene - induced RNA silencing in plants. Curr. Biol. 12, 684-688. doi: 10.1016/S0960-9822(02)00792-3
-
(2002)
Curr. Biol
, vol.12
, pp. 684-688
-
-
Beclin, C.1
Boutet, S.2
Waterhouse, P.3
Vaucheret, H.4
-
5
-
-
84942291974
-
AtROS1 overexpression provides evidence for epigenetic regulation of genes encoding enzymes of flavonoid biosynthesis and antioxidant pathways during salt stress in transgenic tobacco
-
[Epub ahead of print]
-
Bharti, P., Mahajan, M., Vishwakarma, A. K., Bhardwaj, J., and Yadav, S. K. (2015). AtROS1 overexpression provides evidence for epigenetic regulation of genes encoding enzymes of flavonoid biosynthesis and antioxidant pathways during salt stress in transgenic tobacco. J. Exp. Bot. doi: 10.1093/jxb/erv304 [Epub ahead of print].
-
(2015)
J. Exp. Bot
-
-
Bharti, P.1
Mahajan, M.2
Vishwakarma, A.K.3
Bhardwaj, J.4
Yadav, S.K.5
-
6
-
-
0028520248
-
Distinct phenotypes generated by overexpression and suppression of S-adenosyl-l-methionine reveal developmental patterns of gene silencing in tobacco
-
Boerjan, W., Bauw, G., Van Montagu, M., and Inze, D. (1994). Distinct phenotypes generated by overexpression and suppression of S-adenosyl-l-methionine reveal developmental patterns of gene silencing in tobacco. Plant Cell 6, 1401-1414. doi: 10.2307/3869977
-
(1994)
Plant Cell
, vol.6
, pp. 1401-1414
-
-
Boerjan, W.1
Bauw, G.2
Van Montagu, M.3
Inze, D.4
-
7
-
-
84921364518
-
Epigenetic transitions leading to heritable, RNA-mediated de novo silencing in Arabidopsis thaliana
-
Bond, D. M., and Baulcombe, D. C. (2015). Epigenetic transitions leading to heritable, RNA-mediated de novo silencing in Arabidopsis thaliana. Proc. Natl. Acad.Sci.U.S.A. 112, 917-922. doi: 10.1073/pnas.1413053112
-
(2015)
Proc. Natl. Acad.Sci.U.S.A
, vol.112
, pp. 917-922
-
-
Bond, D.M.1
Baulcombe, D.C.2
-
8
-
-
0032538794
-
Viral pathogenicitydeterminants are suppressors oftransgene silencing
-
Brigneti, G., Voinnet, O., Li, W.-X., Ding, S. W., and Baulcombe, D. C. (1998). Viral pathogenicitydeterminants are suppressors oftransgene silencing. EMBOJ. 17, 6739-6746. doi: 10.1093/emboj/17.22.6739
-
(1998)
EMBOJ
, vol.17
, pp. 6739-6746
-
-
Brigneti, G.1
Voinnet, O.2
Li, W.-X.3
Ding, S.W.4
Baulcombe, D.C.5
-
9
-
-
0033782027
-
Co-silencing of homologous transgenes in tobacco
-
Charrier, B., Scollan, C., Ross, S., Zubko, E., and Meyer, P. (2000). Co-silencing of homologous transgenes in tobacco. Mol. Breed. 6, 407-419. doi: 10.1023/A:1009672714835
-
(2000)
Mol. Breed
, vol.6
, pp. 407-419
-
-
Charrier, B.1
Scollan, C.2
Ross, S.3
Zubko, E.4
Meyer, P.5
-
10
-
-
36849042616
-
Transgene-induced silencing of Arabidopsis phytochrome A gene via exonic methylation
-
Chawla, R., Nicholson, S. J., Folta, K. M., and Srivastava, V. (2007). Transgene-induced silencing of Arabidopsis phytochrome A gene via exonic methylation. Plant J. 52, 1105-1118. doi: 10.1111/j.1365-313X.2007.03301.x
-
(2007)
Plant J
, vol.52
, pp. 1105-1118
-
-
Chawla, R.1
Nicholson, S.J.2
Folta, K.M.3
Srivastava, V.4
-
11
-
-
0034103861
-
Potato virus X amplicons in Arabidopsis mediate genetic and epigenetic gene silencing
-
Dalmay, T., Hamilton, A., Mueller, E., and Baulcombe, C. D. (2000). Potato virus X amplicons in Arabidopsis mediate genetic and epigenetic gene silencing. Plant Cell 12, 369-380. doi: 10.2307/3870942
-
(2000)
Plant Cell
, vol.12
, pp. 369-380
-
-
Dalmay, T.1
Hamilton, A.2
Mueller, E.3
Baulcombe, C.D.4
-
12
-
-
0034669170
-
Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced
-
Day, C. D., Lee, E., Kobayashi, J., Holappa, L. D., Albert, H., and Ow, D. W. (2000). Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced. Genes Dev. 14,2869-2880. doi: 10.1101/gad.849600
-
(2000)
Genes Dev
, vol.14
, pp. 2869-2880
-
-
Day, C.D.1
Lee, E.2
Kobayashi, J.3
Holappa, L.D.4
Albert, H.5
Ow, D.W.6
-
13
-
-
0028335970
-
Identification of plant genetic loci involved in a post-transcriptional mechanism for meiotically reversible transgene silencing
-
Dehio, C., and Schell, J. (1994). Identification of plant genetic loci involved in a post-transcriptional mechanism for meiotically reversible transgene silencing. Proc.Natl. Acad.Sci.U.S.A. 91, 5538-5542. doi: 10.1073/pnas.91.12.5538
-
(1994)
Proc.Natl. Acad.Sci.U.S.A
, vol.91
, pp. 5538-5542
-
-
Dehio, C.1
Schell, J.2
-
14
-
-
34249782141
-
Transgene silencing
-
Oxford Ames, ed. P. Meyer (Iowa: Blackwell Publishing
-
Depicker, A., Sanders, M., and Meyer, P. (2005). "Transgene silencing," in Plant epigenetics. Oxford Ames, ed. P. Meyer (Iowa: Blackwell Publishing), 1-32. doi: 10.1002/9780470988626.ch1
-
(2005)
Plant Epigenetics
, pp. 1-32
-
-
Depicker, A.1
Sanders, M.2
Meyer, P.3
-
15
-
-
0031005267
-
Posttranscriptional gene silencing in plants
-
Depicker, A., and Van Montagu, M. (1997). Posttranscriptional gene silencing in plants. Curr. Opin. Cell Biol. 9, 373-382. doi: 10.1016/S0955-0674(97)80010-5
-
(1997)
Curr. Opin. Cell Biol
, vol.9
, pp. 373-382
-
-
Depicker, A.1
Van Montagu, M.2
-
16
-
-
77954309746
-
Stability of transgene expression as a challenge for genetic engineering
-
Dietz-Pfeilstetter, A. (2010). Stability of transgene expression as a challenge for genetic engineering. Plant Sci. 179, 164-167. doi: 10.1016/j.plantsci.2010.04.015
-
(2010)
Plant Sci
, vol.179
, pp. 164-167
-
-
Dietz-Pfeilstetter, A.1
-
17
-
-
0029055197
-
Transgenes and gene suppression: Telling us something new
-
Dougherty, W. G., and Parks, T. D. (1995). Transgenes and gene suppression: telling us something new? Curr. Opin. Cell Biol. 7, 399-405. doi: 10.1016/0955-0674(95)80096-4
-
(1995)
Curr. Opin. Cell Biol
, vol.7
, pp. 399-405
-
-
Dougherty, W.G.1
Parks, T.D.2
-
18
-
-
0000758988
-
Expression of single copies of a strongly expressed 35S transgene can be silenced post-transcriptionally
-
Elmayan, T., and Vaucheret, H. (1996). Expression of single copies of a strongly expressed 35S transgene can be silenced post-transcriptionally. Plant J. 9, 787-797. doi: 10.1046/j.1365-313X.1996.9060787.x
-
(1996)
Plant J
, vol.9
, pp. 787-797
-
-
Elmayan, T.1
Vaucheret, H.2
-
19
-
-
0028858116
-
Transgene inactivation in Petunia hybrida is influenced by the properties of the foreign gene
-
Elomaa, P., Helariutta, Y., Griesbach, J. R., Kotilainen, M., Seppanen, P., and Teeri, H. T. (1995). Transgene inactivation in Petunia hybrida is influenced by the properties of the foreign gene. Mol. Genet. Genomics 248, 649-656. doi: 10.1007/BF02191704
-
(1995)
Mol. Genet. Genomics
, vol.248
, pp. 649-656
-
-
Elomaa, P.1
Helariutta, Y.2
Griesbach, J.R.3
Kotilainen, M.4
Seppanen, P.5
Teeri, H.T.6
-
20
-
-
0030066256
-
Suppression of virus accumulation in transgenic plants exhibiting silencing of nuclear genes
-
English, J. J., Mueller, E., and Baulcombe, D. C. (1996). Suppression of virus accumulation in transgenic plants exhibiting silencing of nuclear genes. Plant Cell 8, 179-188. doi: 10.1105/tpc.8.2.179
-
(1996)
Plant Cell
, vol.8
, pp. 179-188
-
-
English, J.J.1
Mueller, E.2
Baulcombe, D.C.3
-
21
-
-
0034485171
-
(TRANS)GENE SILENCING IN PLANTS: How many mechanisms?
-
Fagard, M., and Vaucheret, H. (2000). (TRANS)GENE SILENCING IN PLANTS: how many mechanisms? Annu. Rev. Plant Physiol. Plant Mol. Biol. 51, 167-194. doi: 10.1146/annurev.arplant.51.1.167
-
(2000)
Annu. Rev. Plant Physiol. Plant Mol. Biol
, vol.51
, pp. 167-194
-
-
Fagard, M.1
Vaucheret, H.2
-
22
-
-
79951541989
-
Transgene expression and transgene-induced silencing in diploid and autotetraploid Arabidopsis
-
Finn, E. T., Wang, L., Smolilo, D., Smith, A. N., White, R., Chaudhury, A., et al. (2011). Transgene expression and transgene-induced silencing in diploid and autotetraploid Arabidopsis. Genetics 187, 409-423. doi: 10.1534/genetics.110.124370
-
(2011)
Genetics
, vol.187
, pp. 409-423
-
-
Finn, E.T.1
Wang, L.2
Smolilo, D.3
Smith, A.N.4
White, R.5
Chaudhury, A.6
-
23
-
-
0034112666
-
Linear transgene constructs lacking vector backbone sequences generate low-copy-number transgenic plants with simple integration patterns
-
Fu, X., Duc, L. T., Fontana, S., Bong, B. B., Tinjuangjun, P., Sudhakar, D., et al. (2000). Linear transgene constructs lacking vector backbone sequences generate low-copy-number transgenic plants with simple integration patterns. Transgenic Res. 9, 9-11. doi: 10.1023/A:1008993730505
-
(2000)
Transgenic Res
, vol.9
, pp. 9-11
-
-
Fu, X.1
Duc, L.T.2
Fontana, S.3
Bong, B.B.4
Tinjuangjun, P.5
Sudhakar, D.6
-
24
-
-
73949098622
-
Transgene silencing in grapevines transformed with GFLV resistance genes: Analysis of variable expression of transgene, siRNAs production and cytosine methylation
-
Gambino, G., Perrone, I., Carra, A., Chitarra, W., Boccacci, P., Torello Marinoni, D., et al. (2010). Transgene silencing in grapevines transformed with GFLV resistance genes: analysis of variable expression of transgene, siRNAs production and cytosine methylation. Transgenic Res. 19, 17-27. doi:10.1007/s11248-009-9289-5
-
(2010)
Transgenic Res
, vol.19
, pp. 17-27
-
-
Gambino, G.1
Perrone, I.2
Carra, A.3
Chitarra, W.4
Boccacci, P.5
Torello Marinoni, D.6
-
25
-
-
84855289093
-
Understanding and avoiding transgene silencing
-
C. N. Stewart, A. Touraev, V. Citopvsky, and T. Tzfira (West Sussex: Blackwell Publishing)
-
Graham, M. W., Mudge, S. R., Sternes, P. R., and Birch, R. G. (2011)."Understanding and avoiding transgene silencing" in Plant Transformation Technologies, eds C. N. Stewart, A. Touraev, V. Citopvsky, and T. Tzfira (West Sussex: Blackwell Publishing). doi: 10.1002/9780470958988.ch12
-
(2011)
Plant Transformation Technologies
-
-
Graham, M.W.1
Mudge, S.R.2
Sternes, P.R.3
Birch, R.G.4
-
26
-
-
0036532235
-
Heterochromatin: New possibilities for the inheritance of structure
-
Grewal, S. I. S., and Elgin, S. C. R. (2002). Heterochromatin: new possibilities for the inheritance of structure. Curr. Opin. Gen. Dev. 12, 178-187. doi:10.1016/S0959-437X(02)00284-8
-
(2002)
Curr. Opin. Gen. Dev
, vol.12
, pp. 178-187
-
-
Grewal, S.1
Elgin, S.2
-
27
-
-
33745561418
-
Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis
-
Huettel, B., Kanno, T., Daxinger, L., Aufsatz, W., Matzke, A. J. M., and Matzke, M. (2006). Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis. EMBO J. 25, 2828-2836. doi: 10.1038/sj.emboj.7601150
-
(2006)
EMBO J
, vol.25
, pp. 2828-2836
-
-
Huettel, B.1
Kanno, T.2
Daxinger, L.3
Aufsatz, W.4
Matzke, A.5
Matzke, M.6
-
28
-
-
0028020672
-
Post-transcriptional silencing of reporter transgenes in tobacco correlates with DNA methylation
-
Ingelbrecht, I., Van Houdt, H., Van Montagu, M., and Depicker, A. (1994). Post-transcriptional silencing of reporter transgenes in tobacco correlates with DNA methylation. Proc. Natl. Acad. Sci. U.S.A. 91, 10502-10506. doi: 10.1073/pnas.91.22.10502
-
(1994)
Proc. Natl. Acad. Sci. U.S.A
, vol.91
, pp. 10502-10506
-
-
Ingelbrecht, I.1
Van Houdt, H.2
Van Montagu, M.3
Depicker, A.4
-
29
-
-
0032802108
-
Posttranscriptional gene silencing in transgenic sugarcane. Dissection of homology-dependent virus resistance in a monocot that has a complex polyploid genome
-
Ingelbrecht, L. I., Irvine, E. J., and Mirkov, T. E. (1999). Posttranscriptional gene silencing in transgenic sugarcane. dissection of homology-dependent virus resistance in a monocot that has a complex polyploid genome. Plant Physiol. 119, 1187-1197. doi: 10.1104/pp.119.4.1187
-
(1999)
Plant Physiol
, vol.119
, pp. 1187-1197
-
-
Ingelbrecht, L.I.1
Irvine, E.J.2
Mirkov, T.E.3
-
30
-
-
28444491225
-
-
Ithaca, NY, USA: International Service for the Acquisition of Agri-biotech Applications (ISAAA)
-
James, C. (2014). Global Status ofCommercialized Biotech/GM Crops. Ithaca, NY, USA: International Service for the Acquisition of Agri-biotech Applications (ISAAA).
-
(2014)
Global Status Ofcommercialized Biotech/Gm Crops
-
-
James, C.1
-
31
-
-
84855404214
-
RDR2 partially antagonizes the production of RDR6-dependent siRNA in sense transgene-mediated PTGS
-
Jauvion, V., Rivard, M., Bouteiller, N., Elmayan, T., and Vaucheret, H. (2012). RDR2 partially antagonizes the production of RDR6-dependent siRNA in sense transgene-mediated PTGS. PLoS ONE 7:e29785. doi: 10.1371/journal.pone.0029785
-
(2012)
Plos ONE
, vol.7
-
-
Jauvion, V.1
Rivard, M.2
Bouteiller, N.3
Elmayan, T.4
Vaucheret, H.5
-
32
-
-
38849164219
-
RNA silencing movement in plants
-
Kalantidis, K., Schumacher, H. K., Alexiadis, T., and Helm, J. M. (2008). RNA silencing movement in plants. Biol. Cell 100, 13-26. doi: 10.1042/BC20070079
-
(2008)
Biol. Cell
, vol.100
, pp. 13-26
-
-
Kalantidis, K.1
Schumacher, H.K.2
Alexiadis, T.3
Helm, J.M.4
-
33
-
-
34250307172
-
Epigenetic inactivation of chalcone synthase-a transgene transcription in petunia leads to a reversion of the post-transcriptional gene silencing phenotype
-
Kanazawa, A., O'Dell, M., and Hellens, P. R. (2007). Epigenetic inactivation of chalcone synthase-a transgene transcription in petunia leads to a reversion of the post-transcriptional gene silencing phenotype. Plant Cell Physiol. 48, 638-647. doi: 10.1093/pcp/pcm028
-
(2007)
Plant Cell Physiol
, vol.48
, pp. 638-647
-
-
Kanazawa, A.1
O'dell, M.2
Hellens, P.R.3
-
34
-
-
0034005630
-
Post-transcriptional gene silencing in cultured rice cells
-
Kanno, T., Naito, S., and Shimamoto, G. (2000). Post-transcriptional gene silencing in cultured rice cells. Plant and Cell Physiol. 41, 321-326. doi: 10.1093/pcp/41.3.321
-
(2000)
Plant and Cell Physiol
, vol.41
, pp. 321-326
-
-
Kanno, T.1
Naito, S.2
Shimamoto, G.3
-
35
-
-
0032514856
-
Acounter-defensive strategyofplant viruses: Suppression ofposttranscriptional gene silencing
-
Kasschau, K. D., and Carrington, J. C. (1998). Acounter-defensive strategyofplant viruses: suppression ofposttranscriptional gene silencing. Cell95, 461-470. doi: 10.1016/S0092-8674(00)81614-1
-
(1998)
Cell95
, pp. 461-470
-
-
Kasschau, K.D.1
Carrington, J.C.2
-
36
-
-
79957560211
-
Paramutation of tobacco transgenes by small RNA-mediated transcriptional gene silencing
-
Khaitova, C. L., Fojtova, M., Krizova, K., Lunerova, J., Fulnecek, J., Depicker, A., et al. (2011). Paramutation of tobacco transgenes by small RNA-mediated transcriptional gene silencing. Epigenetics 6, 650-660. doi: 10.4161/epi.6.5.15764
-
(2011)
Epigenetics
, vol.6
, pp. 650-660
-
-
Khaitova, C.L.1
Fojtova, M.2
Krizova, K.3
Lunerova, J.4
Fulnecek, J.5
Depicker, A.6
-
37
-
-
34548554885
-
The quest to understand the basis and mechanisms that control expression of introduced transgenes in crop plants
-
Kohli, A., Melendi, P. G., Abranches, R., Capell, T., and Christou, P. (2006). The quest to understand the basis and mechanisms that control expression of introduced transgenes in crop plants. Plant Signal. Behav. 1, 185-195. doi: 10.4161/psb.1.4.3195
-
(2006)
Plant Signal. Behav
, vol.1
, pp. 185-195
-
-
Kohli, A.1
Melendi, P.G.2
Abranches, R.3
Capell, T.4
Christou, P.5
-
38
-
-
84890415081
-
Transgene integration, expression and stability in plants: Strategies for improvements
-
edsC. Kole, C. H. Michler, A. G. Abbott, and T. C. Hall (Berlin: Springer-Verlag)
-
Kohli, A., Miro, B., and Twyman, R. M. (2010). "Transgene integration, expression and stability in plants: strategies for improvements," in Transgenic Crop Plants: Principles and Development, edsC. Kole, C. H. Michler, A. G. Abbott, and T. C. Hall (Berlin: Springer-Verlag), 201-237. doi: 10.1007/978-3-642-04809-8_7
-
(2010)
Transgenic Crop Plants: Principles and Development
, pp. 201-237
-
-
Kohli, A.1
Miro, B.2
Twyman, R.M.3
-
39
-
-
84891668248
-
Epigenetic switches of tobacco transgenes associate with transient redistribution of histone marks in callus culture
-
Křížová, K., Depicker, A., and Kovarik, A. (2013). Epigenetic switches of tobacco transgenes associate with transient redistribution of histone marks in callus culture. Epigenetics 8, 666-676. doi: 10.4161/epi.24613
-
(2013)
Epigenetics
, vol.8
, pp. 666-676
-
-
Křížová, K.1
Depicker, A.2
Kovarik, A.3
-
40
-
-
0031896020
-
Recurrent onset of epigenetic silencing in rice harboring a multi-copytransgene
-
Kumpatla, S. P., and Hall, T. C. (1998). Recurrent onset of epigenetic silencing in rice harboring a multi-copytransgene. PlantJ. 14, 129-135. doi: 10.1046/j.1365-313X.1998.00097.x
-
(1998)
Plantj
, vol.14
, pp. 129-135
-
-
Kumpatla, S.P.1
Hall, T.C.2
-
41
-
-
34848904239
-
Targets of RNA directed DNA methylation
-
Matzke, M., Kanno, T., Huettel, B., Daxinger, L., and Matzke, A. J. (2007). Targets of RNA directed DNA methylation. Curr. Opin. Plant Biol. 10, 512-519. doi: 10.1016/j.pbi.2007.06.007
-
(2007)
Curr. Opin. Plant Biol
, vol.10
, pp. 512-519
-
-
Matzke, M.1
Kanno, T.2
Huettel, B.3
Daxinger, L.4
Matzke, A.J.5
-
42
-
-
0033832421
-
Transgene silencing by the host genome defense: Implications for the evolution of epigenetic control mechanisms in plants and vertebrates
-
Matzke, M. A., Mette, M. F., and Matzke, A. J. (2000). Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanisms in plants and vertebrates. Plant Mol. Biol. 43, 401-415. doi: 10.1023/A:1006484806925
-
(2000)
Plant Mol. Biol
, vol.43
, pp. 401-415
-
-
Matzke, M.A.1
Mette, M.F.2
Matzke, A.J.3
-
43
-
-
0000213492
-
Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants
-
Matzke, M. A., Primig, M., Trnovsky, J., and Matzke, A. J. M. (1989). Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants. EMBO J. 8, 643-649.
-
(1989)
EMBO J
, vol.8
, pp. 643-649
-
-
Matzke, M.A.1
Primig, M.2
Trnovsky, J.3
Matzke, A.4
-
44
-
-
33746459425
-
Transcriptionally silenced transgenes in maize are activated by three mutations defective in paramutation
-
McGinnis, K. M., Springer, C., Lin, Y., Carey, C. C., and Chandler, V. (2006). Transcriptionally silenced transgenes in maize are activated by three mutations defective in paramutation. Genetics 173, 1637-1647. doi: 10.1534/genetics.106.058669
-
(2006)
Genetics
, vol.173
, pp. 1637-1647
-
-
McGinnis, K.M.1
Springer, C.2
Lin, Y.3
Carey, C.C.4
Chandler, V.5
-
45
-
-
0030942554
-
RNA-mediated RNA degradation and chalcone synthase a silencing in petunia
-
Metzlaff, M., O'Dell, M., Cluster, P. D., and Flavell, R. B. (1997). RNA-mediated RNA degradation and chalcone synthase a silencing in petunia. Cell 88, 845-854. doi: 10.1016/S0092-8674(00)81930-3
-
(1997)
Cell
, vol.88
, pp. 845-854
-
-
Metzlaff, M.1
O'dell, M.2
Cluster, P.D.3
Flavell, R.B.4
-
46
-
-
0032989790
-
The role of chromatin remodeling in transgene silencing and plant development
-
Meyer, P. (1999). The role of chromatin remodeling in transgene silencing and plant development. In Vitro Cell. Dev. Biol. Plant 35, 29-36. doi: 10.1007/s11627-999-0006-0
-
(1999)
In Vitro Cell. Dev. Biol. Plant
, vol.35
, pp. 29-36
-
-
Meyer, P.1
-
47
-
-
0033828434
-
Transcriptional transgene silencing and chromatin components
-
Meyer, P. (2000). Transcriptional transgene silencing and chromatin components. Plant Mol. Biol. 43, 221-234. doi: 10.1023/A:1006483428789
-
(2000)
Plant Mol. Biol
, vol.43
, pp. 221-234
-
-
Meyer, P.1
-
48
-
-
84930214157
-
Epigenetic variation and environmental change
-
Meyer, P. (2015). Epigenetic variation and environmental change. J. Exp. Bot. 66, 3541-3548. doi: 10.1093/jxb/eru502
-
(2015)
J. Exp. Bot
, vol.66
, pp. 3541-3548
-
-
Meyer, P.1
-
49
-
-
0028307052
-
Epigenetic variants of a transgenic petunia line show hypermethylation in transgene DNA: An indication for specific recognitionofforeign DNAintransgenic plants
-
Meyer, P., and Heidmann, I. (1994). Epigenetic variants of a transgenic petunia line show hypermethylation in transgene DNA: an indication for specific recognitionofforeign DNAintransgenic plants. Mol. Gen. Genet. 243, 390-399. doi: 10.1007/BF00280469
-
(1994)
Mol. Gen. Genet
, vol.243
, pp. 390-399
-
-
Meyer, P.1
Heidmann, I.2
-
50
-
-
0027635986
-
Differences in DNA-methylation are associated with a paramutation phenomenon in transgenic petunia
-
Meyer, P., Heidmann, I., and Niedenhof, I. (1993). Differences in DNA-methylation are associated with a paramutation phenomenon in transgenic petunia. Plant J. 4, 89-100. doi: 10.1046/j.1365-313X.1993.04010089.x
-
(1993)
Plant J
, vol.4
, pp. 89-100
-
-
Meyer, P.1
Heidmann, I.2
Niedenhof, I.3
-
51
-
-
0026518514
-
Endogenous and environmental factors influence 35S promoter methylation of a maize A1 gene construct in transgenic petunia and its colour phenotype
-
Meyer, P., Linn, F., Heidmann, I., Heiner Meyerz, A. H., Niedenhof, I., and Saedler, H. (1992). Endogenous and environmental factors influence 35S promoter methylation of a maize A1 gene construct in transgenic petunia and its colour phenotype. Mol. Gen. Genet. 231, 345-352. doi: 10.1007/BF002 92701
-
(1992)
Mol. Gen. Genet
, vol.231
, pp. 345-352
-
-
Meyer, P.1
Linn, F.2
Heidmann, I.3
Heiner Meyerz, A.H.4
Niedenhof, I.5
Saedler, H.6
-
52
-
-
23444436522
-
Evidence for cytosine methylation of non-symmetrical sequences in transgenic Petunia hybrid
-
Meyer, P., Niedenhof, I., and Lohuis, M. T. (1994). Evidence for cytosine methylation of non-symmetrical sequences in transgenic Petunia hybrid. EMBO J. 13,2084-2088.
-
(1994)
EMBO J
, vol.13
, pp. 2084-2088
-
-
Meyer, P.1
Niedenhof, I.2
Lohuis, M.T.3
-
53
-
-
0002695212
-
Homology-dependent gene silencing in plants
-
Meyer, P., and Saedler, H. (1996). Homology-dependent gene silencing in plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 47, 23-48. doi: 10.1146/annurev.arplant.47.1.23
-
(1996)
Annu. Rev. Plant Physiol. Plant Mol. Biol
, vol.47
, pp. 23-48
-
-
Meyer, P.1
Saedler, H.2
-
54
-
-
84875010066
-
Quality evaluation of methyl binding domain based kits for enrichment DNA-methylation sequencing
-
Meyer, T. D., Mampaey, E., Vlemmix, M., Denil, S., Trooskens, G., Renard, J. P., et al. (2013). Quality evaluation of methyl binding domain based kits for enrichment DNA-methylation sequencing. PLoS ONE 8:e59068. doi: 10.1371/journal.pone.0059068
-
(2013)
Plos ONE
, vol.8
-
-
Meyer, T.D.1
Mampaey, E.2
Vlemmix, M.3
Denil, S.4
Trooskens, G.5
Renard, J.P.6
-
55
-
-
58149268063
-
De novo DNA methylation induced by siRNA targeted to endogenous transcribed sequences is genespecific and OsMet1-independent in rice
-
Miki, D., and Shimamoto, K. (2008). De novo DNA methylation induced by siRNA targeted to endogenous transcribed sequences is genespecific and OsMet1-independent in rice. Plant J. 56, 539-549. doi: 10.1111/j.1365-313X.2008.03624.x
-
(2008)
Plant J
, vol.56
, pp. 539-549
-
-
Miki, D.1
Shimamoto, K.2
-
56
-
-
33644667537
-
Consistent transcriptional silencing of 35S-driven transgenes in gentian
-
Mishiba, K., Nishihara, M., Nakatsuka, T., Abe, Y., Hirano, H., Yokoi, T., et al. (2005). Consistent transcriptional silencing of 35S-driven transgenes in gentian.Plant J. 44, 541-556. doi: 10.1111/j.1365-313X.2005.02556.x
-
(2005)
Plant J
, vol.44
, pp. 541-556
-
-
Mishiba, K.1
Nishihara, M.2
Nakatsuka, T.3
Abe, Y.4
Hirano, H.5
Yokoi, T.6
-
57
-
-
0001359591
-
Introduction of a chimeric chalcone synthase gene into petunia results in reversible co-suppression of homologous gene in trans
-
Napoli, C., Lemieux, C., and Jorgensen, R. (1990). Introduction of a chimeric chalcone synthase gene into petunia results in reversible co-suppression of homologous gene in trans. Plant Cell 2, 279-289. doi: 10.2307/3869076
-
(1990)
Plant Cell
, vol.2
, pp. 279-289
-
-
Napoli, C.1
Lemieux, C.2
Jorgensen, R.3
-
58
-
-
0030452646
-
Frequencies, timing, and spatial patterns of cosuppression of nitrate reductase and nitrite reductase in transgenic tobacco plants
-
Palauqui, J. C., Elmayan, T., de Borne, F. D., Crete, P., Charles, C., and Vaucheret, H. (1996). Frequencies, timing, and spatial patterns of cosuppression of nitrate reductase and nitrite reductase in transgenic tobacco plants. Plant Physiol. 112, 1447-1456.
-
(1996)
Plant Physiol
, vol.112
, pp. 1447-1456
-
-
Palauqui, J.C.1
Elmayan, T.2
De Borne, F.D.3
Crete, P.4
Charles, C.5
Vaucheret, H.6
-
59
-
-
0030875953
-
Systemic acquired silencing: Transgene specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions
-
Palauqui, J. C., Elmayan, T., Pollien, J. M., and Vaucheret, H. (1997). Systemic acquired silencing: transgene specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions. EMBO J. 16, 4738-4745. doi: 10.1093/emboj/16.15.4738
-
(1997)
EMBO J
, vol.16
, pp. 4738-4745
-
-
Palauqui, J.C.1
Elmayan, T.2
Pollien, J.M.3
Vaucheret, H.4
-
60
-
-
0032514622
-
Transgenic DNA integrated into the oat genome is frequentlyinterspersedbyhost DNA
-
Pawlowski, P. W., and Somers, A. D. (1998). Transgenic DNA integrated into the oat genome is frequentlyinterspersedbyhost DNA. Proc. Natl. Acad. Sci. U.S.A. 95, 12106-12110. doi: 10.1073/pnas.95.21.12106
-
(1998)
Proc. Natl. Acad. Sci. U.S.A
, vol.95
, pp. 12106-12110
-
-
Pawlowski, P.W.1
Somers, A.D.2
-
61
-
-
0031421379
-
The frequency and degree of co-suppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence
-
Que, Q., Wang, H. Y., English, J. J., and Jorgensen, R. A. (1997). The frequency and degree of co-suppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence. Plant Cell 9, 1357-1368. doi: 10.1105/tpc.9.8.1357
-
(1997)
Plant Cell
, vol.9
, pp. 1357-1368
-
-
Que, Q.1
Wang, H.Y.2
English, J.J.3
Jorgensen, R.A.4
-
62
-
-
84884695071
-
The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA
-
Regulski, M., Lu, Z., Kendall, J., Donoghue, M. T., Reinders, J., Llaca, V., et al. (2013). The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA. Genome Res. 23, 1651-1662. doi: 10.1101/gr.153510.112
-
(2013)
Genome Res
, vol.23
, pp. 1651-1662
-
-
Regulski, M.1
Lu, Z.2
Kendall, J.3
Donoghue, M.T.4
Reinders, J.5
Llaca, V.6
-
63
-
-
33846036442
-
Agrobacterium tumefaciens-mediated genetic transformation ofbarley(Hordeum vulgare L)
-
Shrawat, A. K., Becker, D., and Lorz, H. (2007). Agrobacterium tumefaciens-mediated genetic transformation ofbarley(Hordeum vulgare L). Plant Sci. 172,281-290. doi: 10.1016/j.plantsci.2006.09.005
-
(2007)
Plant Sci
, vol.172
, pp. 2
-
-
Shrawat, A.K.1
Becker, D.2
Lorz, H.3
-
64
-
-
0025400644
-
Inheritance and effect on ripeing of antisense polygalacturonase genes in transgenic tomatoes
-
Smith, C. J., Watson, C. F., Morris, P. C., Bird, C. R., Seymour, G. B., Gray, J. E., et al. (1990). Inheritance and effect on ripeing of antisense polygalacturonase genes in transgenic tomatoes. Plant Mol. Biol. 14, 369-379. doi: 10.1007/BF00028773
-
(1990)
Plant Mol. Biol
, vol.14
, pp. 369-379
-
-
Smith, C.J.1
Watson, C.F.2
Morris, P.C.3
Bird, C.R.4
Seymour, G.B.5
Gray, J.E.6
-
65
-
-
84879056945
-
Plants regenerated from tissue culture contain stable epigenome changes in rice
-
Stroud, H., Ding, B., Simon, S. A., Feng, S., Bellizzi, M., Pellegrini, M., et al. (2013). Plants regenerated from tissue culture contain stable epigenome changes in rice. Elife 2:e00354. doi: 10.7554/eLife.00354
-
(2013)
Elife
, vol.2
-
-
Stroud, H.1
Ding, B.2
Simon, S.A.3
Feng, S.4
Bellizzi, M.5
Pellegrini, M.6
-
66
-
-
84883796284
-
An alternative polyadenylation mechanism coopted to the Arabidopsis RPP7 gene through intronic retrotransposon domestication
-
Tsuchiya, T., and Eulgem, T. (2013). An alternative polyadenylation mechanism coopted to the Arabidopsis RPP7 gene through intronic retrotransposon domestication. Proc. Natl. Acad. Sci. U.S.A. 110, E3535-E3543. doi: 10.1073/pnas.1312545110
-
(2013)
Proc. Natl. Acad. Sci. U.S.A
, vol.110
, pp. E3535-E3543
-
-
Tsuchiya, T.1
Eulgem, T.2
-
67
-
-
0031431112
-
Condensation of chromatin in transcriptional regions ofan inactivated planttransgene: Evidence for an active role of transcription in gene silencing
-
Van Blokland, R., Ten Lohuis, M., and Meyer, P. (1997). Condensation of chromatin in transcriptional regions ofan inactivated planttransgene: evidence for an active role of transcription in gene silencing. Mol. Genet. Genomics 257, 1-13. doi: 10.1007/s004380050617
-
(1997)
Mol. Genet. Genomics
, vol.257
, pp. 1-13
-
-
Van Blokland, R.1
Ten Lohuis, M.2
Meyer, P.3
-
68
-
-
0025405838
-
Flavonoid genes in petunia: Addition of a limited number of genes copies may lead to a suppression of gene expression
-
Van der Krol, A. R., Mur, L. A., Beld, M., Mol, J. N., and Stuitje, A. R. (1990). Flavonoid genes in petunia: addition of a limited number of genes copies may lead to a suppression of gene expression. Plant Cell 2, 291-299. doi: 10.1105/EPC.2.4.291
-
(1990)
Plant Cell
, vol.2
, pp. 291-299
-
-
Van Der Krol, A.R.1
Mur, L.A.2
Beld, M.3
Mol, J.N.4
Stuitje, A.R.5
-
69
-
-
0032534001
-
Silencing of beta-1,3-glucanase genes in tobacco correlates with an increased abundance of RNA degradation intermediates
-
Van Eldik, G. J., Litiere, K., Jacobs, J. J., Van Montagu, M., and Cornelissen, M. (1998). Silencing of beta-1,3-glucanase genes in tobacco correlates with an increased abundance of RNA degradation intermediates. Nucleic Acids Res. 26, 5176-5181. doi: 10.1093/nar/26.22.5176
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 5176-5181
-
-
Van Eldik, G.J.1
Litiere, K.2
Jacobs, J.J.3
Van Montagu, M.4
Cornelissen, M.5
-
70
-
-
0032419651
-
Transgene-induced gene silencing in plants
-
Vaucheret, H., Beclin, C., Elmayan, T., Feuerbach, F., Godon, C., Morel, J. B., et al. (1998). Transgene-induced gene silencing in plants. Plant J. 16, 651-659. doi: 10.1046/j.1365-313x.1998.00337.x
-
(1998)
Plant J
, vol.16
, pp. 651-659
-
-
Vaucheret, H.1
Beclin, C.2
Elmayan, T.3
Feuerbach, F.4
Godon, C.5
Morel, J.B.6
-
71
-
-
0034789243
-
Post-transcriptional gene silencing in plants
-
Vaucheret, H., Beclin, C., and Fagard, M. (2001). Post-transcriptional gene silencing in plants. J. Cell Sci. 114, 3083-3091.
-
(2001)
J. Cell Sci
, vol.114
, pp. 3083-3091
-
-
Vaucheret, H.1
Beclin, C.2
Fagard, M.3
-
72
-
-
0035054777
-
Transcriptional gene silencing in plants: Targets, inducers and regulators
-
Vaucheret, H., and Fagard, M. (2001). Transcriptional gene silencing in plants: targets, inducers and regulators. Trends Genet. 17, 29-35. doi: 10.1016/S0168-9525(00)02166-1
-
(2001)
Trends Genet
, vol.17
, pp. 29-35
-
-
Vaucheret, H.1
Fagard, M.2
-
73
-
-
0031412527
-
A transcriptionally active state is required for post-transcriptional silencing (Co-suppression) of nitrate reductase host genes and transgenes
-
Vaucheret, H., Nussaume, L., Palauqui, J. C., Quillere, I., and Elmayan, T. (1997). A transcriptionally active state is required for post-transcriptional silencing (co-suppression) of nitrate reductase host genes and transgenes. Plant Cell 9, 1495-1504. doi: 10.1105/tpc.9.8.1495
-
(1997)
Plant Cell
, vol.9
, pp. 1495-1504
-
-
Vaucheret, H.1
Nussaume, L.2
Palauqui, J.C.3
Quillere, I.4
Elmayan, T.5
-
74
-
-
84857171447
-
Transgene silencing and transgene-derived siRNAproduction in tobacco plants homozygous for an introduced AtMYB90 construct
-
Velten, J., Cakir, C., Youn, E., Chen, J., and Cazzonelli, I. C. (2012). Transgene silencing and transgene-derived siRNAproduction in tobacco plants homozygous for an introduced AtMYB90 construct. PLoS ONE 7:e30141. doi: 10.1371/journal.pone.0030141
-
(2012)
Plos ONE
, vol.7
-
-
Velten, J.1
Cakir, C.2
Youn, E.3
Chen, J.4
Cazzonelli, I.C.5
-
75
-
-
0032538348
-
Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA
-
Voinnet, O., Vain, P., Angell, S., and Baulcombe, D. C. (1998). Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA. Cell 95, 177-187. doi: 10.1016/S0092-8674(00)81749-3
-
(1998)
Cell
, vol.95
, pp. 177-187
-
-
Voinnet, O.1
Vain, P.2
Angell, S.3
Baulcombe, D.C.4
-
77
-
-
0028031830
-
RNA directed de-novo methylation of genomic sequences in plants
-
Wassenegger, M., Heimes, S., Riedel, L., and Sanger, H. L. (1994). RNA directed de-novo methylation of genomic sequences in plants. Cell 76, 567-576. doi: 10.1016/0092-8674(94)90119-8
-
(1994)
Cell
, vol.76
, pp. 567-576
-
-
Wassenegger, M.1
Heimes, S.2
Riedel, L.3
Sanger, H.L.4
-
78
-
-
84880012669
-
Progressive 35S promoter methylation increases rapidly during vegetative development in transgenic Nicotiana attenuata plants
-
Weinhold, A., Kallenbach, M., and Ian Thomas Baldwin, T. I. (2013). Progressive 35S promoter methylation increases rapidly during vegetative development in transgenic Nicotiana attenuata plants. BMC Plant Biol. 13:99. doi: 10.1186/1471-2229-13-99
-
(2013)
BMC Plant Biol
, vol.13
, pp. 99
-
-
Weinhold, A.1
Kallenbach, M.2
Ian Thomas Baldwin, T.I.3
-
79
-
-
79954478485
-
-
Yamasaki, S., Oda, M., Koizumi, N., Mitsukuri, K., Johkan, M., Nakatsuka, T., et al. (2011). De Novo Dna Methylation of the 35s Enhancer Revealed by High-Resolution Methylation Analysis. doi: 10.5511/plantbiotechnology.10.1222a
-
(2011)
De Novo Dna Methylation of the 35S Enhancer Revealed by High-Resolution Methylation Analysis
-
-
Yamasaki, S.1
Oda, M.2
Koizumi, N.3
Mitsukuri, K.4
Johkan, M.5
Nakatsuka, T.6
-
80
-
-
84860189755
-
Sulfamethazine suppresses epigenetic silencing in Arabidopsis by impairing folate synthesis
-
Zhang, H., Deng, X., Miki, D., Cutler, S., La, H., Hou, Y. J., et al. (2012). Sulfamethazine suppresses epigenetic silencing in Arabidopsis by impairing folate synthesis. Plant Cell 24, 1230-1241. doi: 10.1105/tpc.112.096149
-
(2012)
Plant Cell
, vol.24
, pp. 1230-1241
-
-
Zhang, H.1
Deng, X.2
Miki, D.3
Cutler, S.4
La, H.5
Hou, Y.J.6
|