-
1
-
-
77249170184
-
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
-
Law JA, Jacobsen SE, (2010) Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11: 204-220.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 204-220
-
-
Law, J.A.1
Jacobsen, S.E.2
-
2
-
-
58849092225
-
Epigenetic control of T-helper-cell differentiation
-
Wilson CB, Rowell E, Sekimata M, (2009) Epigenetic control of T-helper-cell differentiation. Nat Rev Immunol 9: 91-105.
-
(2009)
Nat Rev Immunol
, vol.9
, pp. 91-105
-
-
Wilson, C.B.1
Rowell, E.2
Sekimata, M.3
-
3
-
-
79251567720
-
DNA methylation of the first exon is tightly linked to transcriptional silencing
-
Brenet F, Moh M, Funk P, Feierstein E, Viale AJ, et al. (2010) DNA methylation of the first exon is tightly linked to transcriptional silencing. PLoS ONE 6: e14524.
-
(2010)
PLoS ONE
, vol.6
-
-
Brenet, F.1
Moh, M.2
Funk, P.3
Feierstein, E.4
Viale, A.J.5
-
4
-
-
33847065486
-
The epigenomics of cancer
-
Jones PA, Baylin SB, (2007) The epigenomics of cancer. Cell 128: 683-692.
-
(2007)
Cell
, vol.128
, pp. 683-692
-
-
Jones, P.A.1
Baylin, S.B.2
-
5
-
-
77956058729
-
Epigenetics and cardiovascular disease
-
Ordovas JM, Smith CE, (2010) Epigenetics and cardiovascular disease. Nat Rev Cardiol 7: 510-519.
-
(2010)
Nat Rev Cardiol
, vol.7
, pp. 510-519
-
-
Ordovas, J.M.1
Smith, C.E.2
-
6
-
-
77950866465
-
Epigenetic regulation in the pathophysiology of Alzheimer's disease
-
Chouliaras L, Rutten BP, Kenis G, Peerbooms O, Visser PJ, et al. (2010) Epigenetic regulation in the pathophysiology of Alzheimer's disease. Prog Neurobiol 90: 498-510.
-
(2010)
Prog Neurobiol
, vol.90
, pp. 498-510
-
-
Chouliaras, L.1
Rutten, B.P.2
Kenis, G.3
Peerbooms, O.4
Visser, P.J.5
-
7
-
-
2642531973
-
Epigenetics in human disease and prospects for epigenetic therapy
-
Egger G, Liang G, Aparicio A, Jones PA, (2004) Epigenetics in human disease and prospects for epigenetic therapy. Nature 429: 457-463.
-
(2004)
Nature
, vol.429
, pp. 457-463
-
-
Egger, G.1
Liang, G.2
Aparicio, A.3
Jones, P.A.4
-
8
-
-
20044372154
-
MGMT gene silencing and benefit from temozolomide in glioblastoma
-
Hegi ME, Diserens AC, Gorlia T, Hamou MF, de Tribolet N, et al. (2005) MGMT gene silencing and benefit from temozolomide in glioblastoma. N Engl J Med 352: 997-1003.
-
(2005)
N Engl J Med
, vol.352
, pp. 997-1003
-
-
Hegi, M.E.1
Diserens, A.C.2
Gorlia, T.3
Hamou, M.F.4
de Tribolet, N.5
-
9
-
-
43449117779
-
Development of a multiplexed urine assay for prostate cancer diagnosis
-
Vener T, Derecho C, Baden J, Wang H, Rajpurohit Y, et al. (2008) Development of a multiplexed urine assay for prostate cancer diagnosis. Clin Chem 54: 874-882.
-
(2008)
Clin Chem
, vol.54
, pp. 874-882
-
-
Vener, T.1
Derecho, C.2
Baden, J.3
Wang, H.4
Rajpurohit, Y.5
-
10
-
-
79952532412
-
Cancer epigenetics: linking basic biology to clinical medicine
-
Tsai HC, Baylin SB, (2011) Cancer epigenetics: linking basic biology to clinical medicine. Cell Res 21: 502-517.
-
(2011)
Cell Res
, vol.21
, pp. 502-517
-
-
Tsai, H.C.1
Baylin, S.B.2
-
11
-
-
77957361278
-
Hepatocellular carcinoma displays distinct DNA methylation signatures with potential as clinical predictors
-
Hernandez-Vargas H, Lambert MP, Le Calvez-Kelm F, Gouysse G, McKay-Chopin S, et al. (2010) Hepatocellular carcinoma displays distinct DNA methylation signatures with potential as clinical predictors. PLoS ONE 5: e9749.
-
(2010)
PLoS ONE
, vol.5
-
-
Hernandez-Vargas, H.1
Lambert, M.P.2
Le Calvez-Kelm, F.3
Gouysse, G.4
McKay-Chopin, S.5
-
12
-
-
68149163117
-
PCR-based methods for detecting single-locus DNA methylation biomarkers in cancer diagnostics, prognostics, and response to treatment
-
Kristensen LS, Hansen LL, (2009) PCR-based methods for detecting single-locus DNA methylation biomarkers in cancer diagnostics, prognostics, and response to treatment. Clin Chem 55: 1471-1483.
-
(2009)
Clin Chem
, vol.55
, pp. 1471-1483
-
-
Kristensen, L.S.1
Hansen, L.L.2
-
13
-
-
0026546877
-
A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands
-
Frommer M, McDonald LE, Millar DS, Collis CM, Watt F, et al. (1992) A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands. Proc Natl Acad Sci USA 89: 1827-1831.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 1827-1831
-
-
Frommer, M.1
McDonald, L.E.2
Millar, D.S.3
Collis, C.M.4
Watt, F.5
-
14
-
-
27144500218
-
Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis
-
Meissner A, Gnirke A, Bell GW, Ramsahoye B, Lander ES, et al. (2005) Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis. Nucleic Acids Res 33: 5868-5877.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5868-5877
-
-
Meissner, A.1
Gnirke, A.2
Bell, G.W.3
Ramsahoye, B.4
Lander, E.S.5
-
15
-
-
84856306090
-
Genome-wide DNA methylation profiling using Infinium (R) assay
-
Bibikova M, Le J, Barnes B, Saedinia-Melnyk S, Zhou LX, et al. (2009) Genome-wide DNA methylation profiling using Infinium (R) assay. Epigenomics 1: 177-200.
-
(2009)
Epigenomics
, vol.1
, pp. 177-200
-
-
Bibikova, M.1
Le, J.2
Barnes, B.3
Saedinia-Melnyk, S.4
Zhou, L.X.5
-
16
-
-
79958754527
-
Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome
-
Sandoval J, Heyn HA, Moran S, Serra-Musach J, Pujana MA, et al. (2011) Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome. Epigenetics 6: 692-702.
-
(2011)
Epigenetics
, vol.6
, pp. 692-702
-
-
Sandoval, J.1
Heyn, H.A.2
Moran, S.3
Serra-Musach, J.4
Pujana, M.A.5
-
17
-
-
79951526454
-
Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array
-
Yang L, Zhang K, Dai W, He X, Zhao Q, et al. (2011) Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array. BMC Genomics 12: 10.
-
(2011)
BMC Genomics
, vol.12
, pp. 10
-
-
Yang, L.1
Zhang, K.2
Dai, W.3
He, X.4
Zhao, Q.5
-
18
-
-
23044514626
-
Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
-
Weber M, Davies JJ, Wittig D, Oakeley EJ, Haase M, et al. (2005) Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat Genet 37: 853-862.
-
(2005)
Nat Genet
, vol.37
, pp. 853-862
-
-
Weber, M.1
Davies, J.J.2
Wittig, D.3
Oakeley, E.J.4
Haase, M.5
-
19
-
-
77950409567
-
Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing
-
Ruike Y, Imanaka Y, Sato F, Shimizu K, Tsujimoto G, (2010) Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing. BMC Genomics 11: 137.
-
(2010)
BMC Genomics
, vol.11
, pp. 137
-
-
Ruike, Y.1
Imanaka, Y.2
Sato, F.3
Shimizu, K.4
Tsujimoto, G.5
-
20
-
-
77449127799
-
MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome
-
Serre D, Lee BH, Ting AH, (2010) MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome. Nucleic Acids Res 38: 391-399.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 391-399
-
-
Serre, D.1
Lee, B.H.2
Ting, A.H.3
-
21
-
-
77957951913
-
Whole-genome DNA methylation profiling using MethylCap-seq
-
Brinkman AB, Simmer F, Ma K, Kaan A, Zhu J, et al. (2010) Whole-genome DNA methylation profiling using MethylCap-seq. Methods 52: 232-236.
-
(2010)
Methods
, vol.52
, pp. 232-236
-
-
Brinkman, A.B.1
Simmer, F.2
Ma, K.3
Kaan, A.4
Zhu, J.5
-
22
-
-
77957937011
-
Quantitative comparison of genome-wide DNA methylation mapping technologies
-
Bock C, Tomazou EM, Brinkman AB, Muller F, Simmer F, et al. (2010) Quantitative comparison of genome-wide DNA methylation mapping technologies. Nat Biotechnol 28: 1106-1114.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 1106-1114
-
-
Bock, C.1
Tomazou, E.M.2
Brinkman, A.B.3
Muller, F.4
Simmer, F.5
-
23
-
-
77955433253
-
Whole genome DNA methylation analysis based on high throughput sequencing technology
-
Li N, Ye M, Li Y, Yan Z, Butcher LM, et al. (2010) Whole genome DNA methylation analysis based on high throughput sequencing technology. Methods 52: 203-212.
-
(2010)
Methods
, vol.52
, pp. 203-212
-
-
Li, N.1
Ye, M.2
Li, Y.3
Yan, Z.4
Butcher, L.M.5
-
24
-
-
78651251739
-
Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias
-
Nair SS, Coolen MW, Stirzaker C, Song JZ, Statham AL, et al. (2011) Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias. Epigenetics 6: 34-44.
-
(2011)
Epigenetics
, vol.6
, pp. 34-44
-
-
Nair, S.S.1
Coolen, M.W.2
Stirzaker, C.3
Song, J.Z.4
Statham, A.L.5
-
25
-
-
28544432211
-
Protocols for the assurance of microarray data quality and process control
-
Burgoon LD, Eckel-Passow JE, Gennings C, Boverhof DR, Burt JW, et al. (2005) Protocols for the assurance of microarray data quality and process control. Nucleic Acids Res 33: e172.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Burgoon, L.D.1
Eckel-Passow, J.E.2
Gennings, C.3
Boverhof, D.R.4
Burt, J.W.5
-
26
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B, Trapnell C, Pop M, Salzberg SL (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology 10:-.
-
(2009)
Genome Biology
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
27
-
-
79960320144
-
EFEMP1 as a Novel DNA Methylation Marker for Prostate Cancer: Array-Based DNA Methylation and Expression Profiling
-
Kim YJ, Yoon HY, Kim SK, Kim YW, Kim EJ, et al. (2011) EFEMP1 as a Novel DNA Methylation Marker for Prostate Cancer: Array-Based DNA Methylation and Expression Profiling. Clinical Cancer Research 17: 4523-4530.
-
(2011)
Clinical Cancer Research
, vol.17
, pp. 4523-4530
-
-
Kim, Y.J.1
Yoon, H.Y.2
Kim, S.K.3
Kim, Y.W.4
Kim, E.J.5
-
28
-
-
24044523177
-
DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG
-
Klose RJ, Sarraf SA, Schmiedeberg L, McDermott SM, Stancheva I, et al. (2005) DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG. Mol Cell 19: 667-678.
-
(2005)
Mol Cell
, vol.19
, pp. 667-678
-
-
Klose, R.J.1
Sarraf, S.A.2
Schmiedeberg, L.3
McDermott, S.M.4
Stancheva, I.5
-
29
-
-
80052016907
-
Solution structure and dynamic analysis of chicken MBD2 methyl binding domain bound to a target-methylated DNA sequence
-
Scarsdale JN, Webb HD, Ginder GD, Williams DC Jr, (2011) Solution structure and dynamic analysis of chicken MBD2 methyl binding domain bound to a target-methylated DNA sequence. Nucleic Acids Res 39: 6741-6752.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 6741-6752
-
-
Scarsdale, J.N.1
Webb, H.D.2
Ginder, G.D.3
Williams Jr., D.C.4
-
30
-
-
70450217879
-
Human DNA methylomes at base resolution show widespread epigenomic differences
-
Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, et al. (2009) Human DNA methylomes at base resolution show widespread epigenomic differences. Nature 462: 315-322.
-
(2009)
Nature
, vol.462
, pp. 315-322
-
-
Lister, R.1
Pelizzola, M.2
Dowen, R.H.3
Hawkins, R.D.4
Hon, G.5
|