Post-transcriptional gene silencing in plants

Journal of Cell Science

Volumn 114, Issue 17, 2001, Pages 3083-3091

  Vaucheret, H ^a   Beclin C ^a   Fagard, M ^a  

^a CEMAGREF   (France)

Author keywords

Mutants; Post transcriptional gene silencing; RNA interference; Transgene; Virus

Indexed keywords

DNA; DNA METHYLTRANSFERASE; DOUBLE STRANDED RNA; HELICASE; PROTEIN; RNA DIRECTED RNA POLYMERASE;

ARABIDOPSIS; ARTICLE; CAENORHABDITIS ELEGANS; CHROMATIN; CONTROLLED STUDY; DNA METHYLATION; GENE REPRESSION; GENE SILENCING; GENETIC CODE; GENETIC TRANSCRIPTION; INFECTION RESISTANCE; INFECTION SENSITIVITY; MOSAIC VIRUS; MUTANT; NONHUMAN; PLANT; PRIORITY JOURNAL; PROTEIN DOMAIN; RNA DEGRADATION; VIRUS INFECTION;

ARABIDOPSIS; CAENORHABDITIS ELEGANS;

EID: 0034789243     PISSN: 00219533     EISSN: None     Source Type: Journal    
DOI: 10.1242/jcs.114.17.3083     Document Type: Article

References (81)

1. Transcriptional and post-transcriptional plant gene silencing in response to a pathogen
2. A viral suppressor of gene silencing in plants
3. A calmodulin-related protein that suppresses post-transcriptional gene silencing in plants
4. Unwinding RNA silencing
5. Infection of tobacco or Arabidopsis plants by CMV counteracts systemic post-transcriptional silencing of nonviral (trans)genes
6. Role for a bidentate ribonuclease in the initiation step of RNA interference
7. Distinct phenotypes generated by over expression and suppression of S-adenosyl-L-methionine synthetase reveal developmental patterns of gene silencing in tobacco
8. Viral pathogenicity determinants are suppressors of transgene silencing in Nicotiana benthamiana
9. Gene silencing in worms and fungi
10. Domains in gene silencing and cell differentiation proteins: The novel PAZ domain and redefinition of the Piwi domain
11. Specific and heritable genetic interference by double-stranded RNA in Arabidopsis thaliana
12. Isolation of quelling-defective (qde) mutants impaired in post-transcriptional transgene-induced gene silencing in Neurospora crassa
13. Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase
14. Transgene silencing of the al-1 gene in vegetative cells of Neurospora is mediated by a cytoplasmic effector and does not depend on DNA-DNA interactions or DNA methylation
15. Plants combat infection by gene silencing
16. A novel class of evolutionary conserved genes defined by piwi are essential for stem cell-renewal
17. An RNA-dependent RNA polymerase gene in Arabidopsis is required for post-transcriptional gene silencing mediated by a transgene but not by a virus
18. SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis
19. Suppression of β-1,3-glucanase transgene expression in homozygous plants
20. Identification of plant genetic loci involved in a post-transcriptional mechanism for meiotically reversible transgene silencing
21. A link between RNA interference and nonsense-mediated decay in Caenorhabditis elegans
22. RNA interference is mediated by 21- and 22-nucleotide RNAs
23. Arabidopsis mutants impaired in cosuppression
24. Expression of single copies of a strongly expressed 35S transgene can be silenced post-transcriptionally
25. AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals
26. Reduced DNA methylation in Arabidopsis thaliana results in abnormal plant development
27. Potent and specific genetic inteference by double-stranded RNA in Caenorhabditis elegans
28. A species of small antisense RNA in post-transcriptional gene silencing in plants
29. A transgene with repeated DNA causes high frequency, post-transcriptional suppression of ACC-oxidase gene expression in tomato
30. Silencing of retrotransposons in Arabidopsis and reactivation by the ddm1 mutation
31. Post-transcriptional silencing of reporter transgenes in tobacco correlates with DNA methylation
32. Disruption of an RNA helicase/RNAseIII gene in Arabidopsis causes unregulated cell division in floral meristems
33. Maintenance of genomic methylation requires a SWI2/SNF2-like protein
34. RNA-DNA interactions and DNA methylation in post-transcriptional gene silencing
35. A counterdefensive strategy of plant viruses: Suppression of post-transcriptional gene silencing
36. Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD
37. Gene silencing from plant DNA carried by a geminivirus
38. Cytoplasmic inhibition of carotenoid biosynthesis with virus-derived RNA
39. The mystique of epigenetics
40. Induction of highly specific antiviral state in transgenic plants: Implications for regulation of gene expression and virus resistance
41. HC-pro suppression of transgene silencing eliminates the small RNAs but not transgene methylation or the mobile signal
42. RNA viruses as inducers, suppressors and targets of post-transcriptional gene silencing
43. RNA-based silencing strategies in plants
44. Transcriptional silencing and promoter methylation triggered by double-stranded RNA
45. RNA-mediated RNA degradation and chalcone synthase A silencing in Petunia
46. Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
47. DNA methylation and chromatin structure affect transcriptional and post-transcriptional transgene silencing in Arabidopsis
48. Arabidopsis SGS2 and SGS3 genes are required for post-transcriptional gene silencing and natural virus resistance
49. Introduction of a chimeric chalcone synthase gene into petunia results in reversible co-suppression of homologous gene in trans
50. Frequencies, timing, and spatial patterns of co-suppression of nitrate reductase and nitrite reductase in transgenic tobacco plants
51. Systemic acquired silencing: Transgene specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions
52. Transgenes are dispensable for the RNA degradation step of cosuppression
53. The frequency and degree of co-suppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence
54. A similarity between viral defense and gene silencing in plants
55. Gene silencing without DNA: RNA-mediated cross-protection between viruses
56. Tobacco rattle virus as a vector for analysis of gene function by silencing
57. Quelling: Transient inactivation of gene expression in Neurospora crassa by transformation with homologous sequences
58. Initiation and maintenance of virus-induced gene silencing
59. Genetic and molecular characterization of sting, a gene involved in crystal formation and meiotic drive in the male germline of Drosophila melanogaster
60. Double-stranded RNA interferes with gene function at the single-cell level in cereals
61. Robertson's mutator transposons in A. thaliana are regulated by the chromatin-remodelling gene decrease in DNA methylation (DDM1)
62. EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans
63. Expression of a truncated tomato polygalacturonase gene inhibits expression of the endogenous gene in transgenic plants
64. Transgenic plant virus resitance mediated by untranslatable sense RNAs: Expression, regulation, and fate of nonessential RNAs
65. Endogenous targets of transcriptional gene silencing in Arabidopsis
66. The rde-1 gene, RNA interference, and transposon silencing in C. elegans
67. Heritable and inducible genetic interference by double-stranded RNA encoded by transgenes
68. Transgene-mediated suppression of chalcone synthase expression in Petunia hybrida results from an increase in RNA turnover
69. Flavonoid genes in petunia: Addition of a limited number of genes copies may lead to a suppression of gene expression
70. Silencing of beta-1,3-glucanase genes in tobacco correlates with an increased abundance of RNA degradation intermediates
71. A transcriptionally active state is required for post-transcriptional silencing (co-suppression) of nitrate reductase host genes and transgenes
72. Systemic signalling in gene silencing
73. Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA
74. Suppression of gene silencing: A general strategy used by diverse DNA and RNA viruses of plants
75. A viral movement protein prevents spread of the gene silencing signal in Nicotiana benthamiana
76. Arabidopsis thaliana DNA methylation mutants
77. RNA-directed de novo methylation of genomic sequences in plants
78. Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense RNA
79. Transgene and transposon silencing in Chlamydomonas reinhardtii by a DEAH-box RNA helicase
80. RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals
81. Molecular cloning and characterization of a rabbit eIF2C protein